Search of human proteins with 28559013

Search of human proteins with 28559013

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|28559013 synovial sarcoma, X breakpoint 4 isoform b [Homo
sapiens]
         (153 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|28559013 synovial sarcoma, X breakpoint 4 isoform b [Homo sap...   324   2e-89
gi|94983919 synovial sarcoma, X breakpoint 4B isoform b [Homo sa...   324   2e-89
gi|5032123 synovial sarcoma, X breakpoint 4 isoform a [Homo sapi...   228   1e-60
gi|83367081 synovial sarcoma, X breakpoint 4B isoform a [Homo sa...   228   1e-60
gi|27902281 synovial sarcoma, X breakpoint 9 [Homo sapiens]           182   7e-47
gi|28559017 synovial sarcoma, X breakpoint 5 isoform b [Homo sap...   181   2e-46
gi|27659732 synovial sarcoma, X breakpoint 7 [Homo sapiens]           176   7e-45
gi|5032121 synovial sarcoma, X breakpoint 1 [Homo sapiens]            174   3e-44
gi|10337601 synovial sarcoma, X breakpoint 3 isoform a [Homo sap...   173   6e-44
gi|28559009 synovial sarcoma, X breakpoint 3 isoform b [Homo sap...   173   6e-44
gi|239746831 PREDICTED: synovial sarcoma, X breakpoint 2B [Homo ...   173   6e-44
gi|28559006 synovial sarcoma, X breakpoint 2 isoform b [Homo sap...   173   6e-44
gi|27659724 synovial sarcoma, X breakpoint 2 isoform a [Homo sap...   173   6e-44
gi|27659730 synovial sarcoma, X breakpoint 6 [Homo sapiens]           164   4e-41
gi|28559015 synovial sarcoma, X breakpoint 5 isoform a [Homo sap...   161   2e-40
gi|147905620 PR domain containing 9 [Homo sapiens]                     55   2e-08
gi|148271100 PR domain containing 7 isoform 1 [Homo sapiens]           55   2e-08
gi|239754759 PREDICTED: similar to zinc finger protein 30 [Homo ...    49   1e-06
gi|239749287 PREDICTED: hypothetical protein XP_002346980 [Homo ...    49   1e-06
gi|239743377 PREDICTED: hypothetical protein XP_002342831 [Homo ...    49   1e-06
gi|239509071 PREDICTED: similar to zinc finger protein 30 [Homo ...    49   1e-06
gi|48717241 zinc finger protein 425 [Homo sapiens]                     44   5e-05
gi|25777704 zinc finger 398 isoform a [Homo sapiens]                   42   2e-04
gi|149773449 zinc finger protein 862 [Homo sapiens]                    42   3e-04
gi|194018495 zinc finger protein 324B [Homo sapiens]                   42   3e-04
gi|22027480 pogo transposable element with KRAB domain [Homo sap...    40   0.001
gi|210147475 zinc finger protein 92 homolog [Homo sapiens]             39   0.002
gi|154759253 zinc finger protein 404 [Homo sapiens]                    39   0.002
gi|167830431 zinc finger protein 530 [Homo sapiens]                    38   0.003
gi|118918411 zinc finger protein 777 [Homo sapiens]                    38   0.004

>gi|28559013 synovial sarcoma, X breakpoint 4 isoform b [Homo
           sapiens]
          Length = 153

 Score =  324 bits (831), Expect = 2e-89
 Identities = 153/153 (100%), Positives = 153/153 (100%)

Query: 1   MNGDDAFARRPRDDAQISEKLRKAFDDIAKYFSKKEWEKMKSSEKIVYVYMKLNYEVMTK 60
           MNGDDAFARRPRDDAQISEKLRKAFDDIAKYFSKKEWEKMKSSEKIVYVYMKLNYEVMTK
Sbjct: 1   MNGDDAFARRPRDDAQISEKLRKAFDDIAKYFSKKEWEKMKSSEKIVYVYMKLNYEVMTK 60

Query: 61  LGFKVTLPPFMRSKRAADFHGNDFGNDRNHRNQVERPQMTFGSLQRIFPKDPKGGNMPGP 120
           LGFKVTLPPFMRSKRAADFHGNDFGNDRNHRNQVERPQMTFGSLQRIFPKDPKGGNMPGP
Sbjct: 61  LGFKVTLPPFMRSKRAADFHGNDFGNDRNHRNQVERPQMTFGSLQRIFPKDPKGGNMPGP 120

Query: 121 TDCVRESSWWFMKRSATLRKMTSNSPRGYDTCP 153
           TDCVRESSWWFMKRSATLRKMTSNSPRGYDTCP
Sbjct: 121 TDCVRESSWWFMKRSATLRKMTSNSPRGYDTCP 153


>gi|94983919 synovial sarcoma, X breakpoint 4B isoform b [Homo
           sapiens]
          Length = 153

 Score =  324 bits (831), Expect = 2e-89
 Identities = 153/153 (100%), Positives = 153/153 (100%)

Query: 1   MNGDDAFARRPRDDAQISEKLRKAFDDIAKYFSKKEWEKMKSSEKIVYVYMKLNYEVMTK 60
           MNGDDAFARRPRDDAQISEKLRKAFDDIAKYFSKKEWEKMKSSEKIVYVYMKLNYEVMTK
Sbjct: 1   MNGDDAFARRPRDDAQISEKLRKAFDDIAKYFSKKEWEKMKSSEKIVYVYMKLNYEVMTK 60

Query: 61  LGFKVTLPPFMRSKRAADFHGNDFGNDRNHRNQVERPQMTFGSLQRIFPKDPKGGNMPGP 120
           LGFKVTLPPFMRSKRAADFHGNDFGNDRNHRNQVERPQMTFGSLQRIFPKDPKGGNMPGP
Sbjct: 61  LGFKVTLPPFMRSKRAADFHGNDFGNDRNHRNQVERPQMTFGSLQRIFPKDPKGGNMPGP 120

Query: 121 TDCVRESSWWFMKRSATLRKMTSNSPRGYDTCP 153
           TDCVRESSWWFMKRSATLRKMTSNSPRGYDTCP
Sbjct: 121 TDCVRESSWWFMKRSATLRKMTSNSPRGYDTCP 153


>gi|5032123 synovial sarcoma, X breakpoint 4 isoform a [Homo
           sapiens]
          Length = 188

 Score =  228 bits (582), Expect = 1e-60
 Identities = 110/110 (100%), Positives = 110/110 (100%)

Query: 1   MNGDDAFARRPRDDAQISEKLRKAFDDIAKYFSKKEWEKMKSSEKIVYVYMKLNYEVMTK 60
           MNGDDAFARRPRDDAQISEKLRKAFDDIAKYFSKKEWEKMKSSEKIVYVYMKLNYEVMTK
Sbjct: 1   MNGDDAFARRPRDDAQISEKLRKAFDDIAKYFSKKEWEKMKSSEKIVYVYMKLNYEVMTK 60

Query: 61  LGFKVTLPPFMRSKRAADFHGNDFGNDRNHRNQVERPQMTFGSLQRIFPK 110
           LGFKVTLPPFMRSKRAADFHGNDFGNDRNHRNQVERPQMTFGSLQRIFPK
Sbjct: 61  LGFKVTLPPFMRSKRAADFHGNDFGNDRNHRNQVERPQMTFGSLQRIFPK 110


>gi|83367081 synovial sarcoma, X breakpoint 4B isoform a [Homo
           sapiens]
          Length = 188

 Score =  228 bits (582), Expect = 1e-60
 Identities = 110/110 (100%), Positives = 110/110 (100%)

Query: 1   MNGDDAFARRPRDDAQISEKLRKAFDDIAKYFSKKEWEKMKSSEKIVYVYMKLNYEVMTK 60
           MNGDDAFARRPRDDAQISEKLRKAFDDIAKYFSKKEWEKMKSSEKIVYVYMKLNYEVMTK
Sbjct: 1   MNGDDAFARRPRDDAQISEKLRKAFDDIAKYFSKKEWEKMKSSEKIVYVYMKLNYEVMTK 60

Query: 61  LGFKVTLPPFMRSKRAADFHGNDFGNDRNHRNQVERPQMTFGSLQRIFPK 110
           LGFKVTLPPFMRSKRAADFHGNDFGNDRNHRNQVERPQMTFGSLQRIFPK
Sbjct: 61  LGFKVTLPPFMRSKRAADFHGNDFGNDRNHRNQVERPQMTFGSLQRIFPK 110


>gi|27902281 synovial sarcoma, X breakpoint 9 [Homo sapiens]
          Length = 188

 Score =  182 bits (463), Expect = 7e-47
 Identities = 88/110 (80%), Positives = 93/110 (84%)

Query: 1   MNGDDAFARRPRDDAQISEKLRKAFDDIAKYFSKKEWEKMKSSEKIVYVYMKLNYEVMTK 60
           MNGDDAFARRPR  +QI EK++KAFDDIAKYFSKKEWEKMKSSEKI+YVYMK  YE MTK
Sbjct: 1   MNGDDAFARRPRAGSQIPEKIQKAFDDIAKYFSKKEWEKMKSSEKIIYVYMKRKYEAMTK 60

Query: 61  LGFKVTLPPFMRSKRAADFHGNDFGNDRNHRNQVERPQMTFGSLQRIFPK 110
           LGFK TLPPFM +  A D  GNDF NDRNHRNQVER QMTFG LQ IFPK
Sbjct: 61  LGFKATLPPFMCNTGATDLQGNDFDNDRNHRNQVERSQMTFGRLQGIFPK 110


>gi|28559017 synovial sarcoma, X breakpoint 5 isoform b [Homo
           sapiens]
          Length = 188

 Score =  181 bits (459), Expect = 2e-46
 Identities = 86/110 (78%), Positives = 93/110 (84%)

Query: 1   MNGDDAFARRPRDDAQISEKLRKAFDDIAKYFSKKEWEKMKSSEKIVYVYMKLNYEVMTK 60
           MNGDDAF RRPR  +QI EK++KAFDDIAKYFS+KEWEKMK+SEKI+YVYMK  YE MTK
Sbjct: 1   MNGDDAFVRRPRVGSQIPEKMQKAFDDIAKYFSEKEWEKMKASEKIIYVYMKRKYEAMTK 60

Query: 61  LGFKVTLPPFMRSKRAADFHGNDFGNDRNHRNQVERPQMTFGSLQRIFPK 110
           LGFK TLPPFMR+KR ADF GNDF ND N  NQVE PQMTFG LQ IFPK
Sbjct: 61  LGFKATLPPFMRNKRVADFQGNDFDNDPNRGNQVEHPQMTFGRLQGIFPK 110


>gi|27659732 synovial sarcoma, X breakpoint 7 [Homo sapiens]
          Length = 188

 Score =  176 bits (446), Expect = 7e-45
 Identities = 86/110 (78%), Positives = 90/110 (81%)

Query: 1   MNGDDAFARRPRDDAQISEKLRKAFDDIAKYFSKKEWEKMKSSEKIVYVYMKLNYEVMTK 60
           MNGDDAFARRPR  AQI EK++K+FDDIAKYFSKKEWEKMKS EKI YVYMK  YE MTK
Sbjct: 1   MNGDDAFARRPRAGAQIPEKIQKSFDDIAKYFSKKEWEKMKSLEKISYVYMKRKYEAMTK 60

Query: 61  LGFKVTLPPFMRSKRAADFHGNDFGNDRNHRNQVERPQMTFGSLQRIFPK 110
           LGFK TLPPFM +  A D  GNDF NDRN  NQVERPQMTF  LQRIFPK
Sbjct: 61  LGFKATLPPFMHNTGATDLQGNDFDNDRNQGNQVERPQMTFCRLQRIFPK 110


>gi|5032121 synovial sarcoma, X breakpoint 1 [Homo sapiens]
          Length = 188

 Score =  174 bits (441), Expect = 3e-44
 Identities = 84/110 (76%), Positives = 90/110 (81%)

Query: 1   MNGDDAFARRPRDDAQISEKLRKAFDDIAKYFSKKEWEKMKSSEKIVYVYMKLNYEVMTK 60
           MNGDD FA+RPRDDA+ SEK  KAFDDIA YFSKKEW+KMK SEKI YVYMK NY+ MTK
Sbjct: 1   MNGDDTFAKRPRDDAKASEKRSKAFDDIATYFSKKEWKKMKYSEKISYVYMKRNYKAMTK 60

Query: 61  LGFKVTLPPFMRSKRAADFHGNDFGNDRNHRNQVERPQMTFGSLQRIFPK 110
           LGFKVTLPPFM +K+A DF GNDF ND N R QVE PQMTFG L RI PK
Sbjct: 61  LGFKVTLPPFMCNKQATDFQGNDFDNDHNRRIQVEHPQMTFGRLHRIIPK 110


>gi|10337601 synovial sarcoma, X breakpoint 3 isoform a [Homo
           sapiens]
          Length = 188

 Score =  173 bits (438), Expect = 6e-44
 Identities = 84/110 (76%), Positives = 89/110 (80%)

Query: 1   MNGDDAFARRPRDDAQISEKLRKAFDDIAKYFSKKEWEKMKSSEKIVYVYMKLNYEVMTK 60
           MNGDD FARRP   AQI EK++KAFDDIAKYFSK+EWEKMK SEKIVYVYMK  YE MTK
Sbjct: 1   MNGDDTFARRPTVGAQIPEKIQKAFDDIAKYFSKEEWEKMKVSEKIVYVYMKRKYEAMTK 60

Query: 61  LGFKVTLPPFMRSKRAADFHGNDFGNDRNHRNQVERPQMTFGSLQRIFPK 110
           LGFK  LP FMR+KR  DF GNDF ND N  NQV+RPQMTFG LQ IFPK
Sbjct: 61  LGFKAILPSFMRNKRVTDFQGNDFDNDPNRGNQVQRPQMTFGRLQGIFPK 110


>gi|28559009 synovial sarcoma, X breakpoint 3 isoform b [Homo
           sapiens]
          Length = 170

 Score =  173 bits (438), Expect = 6e-44
 Identities = 84/110 (76%), Positives = 89/110 (80%)

Query: 1   MNGDDAFARRPRDDAQISEKLRKAFDDIAKYFSKKEWEKMKSSEKIVYVYMKLNYEVMTK 60
           MNGDD FARRP   AQI EK++KAFDDIAKYFSK+EWEKMK SEKIVYVYMK  YE MTK
Sbjct: 1   MNGDDTFARRPTVGAQIPEKIQKAFDDIAKYFSKEEWEKMKVSEKIVYVYMKRKYEAMTK 60

Query: 61  LGFKVTLPPFMRSKRAADFHGNDFGNDRNHRNQVERPQMTFGSLQRIFPK 110
           LGFK  LP FMR+KR  DF GNDF ND N  NQV+RPQMTFG LQ IFPK
Sbjct: 61  LGFKAILPSFMRNKRVTDFQGNDFDNDPNRGNQVQRPQMTFGRLQGIFPK 110


>gi|239746831 PREDICTED: synovial sarcoma, X breakpoint 2B [Homo
           sapiens]
          Length = 188

 Score =  173 bits (438), Expect = 6e-44
 Identities = 85/110 (77%), Positives = 90/110 (81%)

Query: 1   MNGDDAFARRPRDDAQISEKLRKAFDDIAKYFSKKEWEKMKSSEKIVYVYMKLNYEVMTK 60
           MNGDDAFARRP   AQI EK++KAFDDIAKYFSK+EWEKMK+SEKI YVYMK  YE MTK
Sbjct: 1   MNGDDAFARRPTVGAQIPEKIQKAFDDIAKYFSKEEWEKMKASEKIFYVYMKRKYEAMTK 60

Query: 61  LGFKVTLPPFMRSKRAADFHGNDFGNDRNHRNQVERPQMTFGSLQRIFPK 110
           LGFK TLPPFM +KRA DF GND  ND N  NQVERPQMTFG LQ I PK
Sbjct: 61  LGFKATLPPFMCNKRAEDFQGNDLDNDPNRGNQVERPQMTFGRLQGISPK 110


>gi|28559006 synovial sarcoma, X breakpoint 2 isoform b [Homo
           sapiens]
          Length = 188

 Score =  173 bits (438), Expect = 6e-44
 Identities = 85/110 (77%), Positives = 90/110 (81%)

Query: 1   MNGDDAFARRPRDDAQISEKLRKAFDDIAKYFSKKEWEKMKSSEKIVYVYMKLNYEVMTK 60
           MNGDDAFARRP   AQI EK++KAFDDIAKYFSK+EWEKMK+SEKI YVYMK  YE MTK
Sbjct: 1   MNGDDAFARRPTVGAQIPEKIQKAFDDIAKYFSKEEWEKMKASEKIFYVYMKRKYEAMTK 60

Query: 61  LGFKVTLPPFMRSKRAADFHGNDFGNDRNHRNQVERPQMTFGSLQRIFPK 110
           LGFK TLPPFM +KRA DF GND  ND N  NQVERPQMTFG LQ I PK
Sbjct: 61  LGFKATLPPFMCNKRAEDFQGNDLDNDPNRGNQVERPQMTFGRLQGISPK 110


>gi|27659724 synovial sarcoma, X breakpoint 2 isoform a [Homo
           sapiens]
          Length = 223

 Score =  173 bits (438), Expect = 6e-44
 Identities = 85/110 (77%), Positives = 90/110 (81%)

Query: 1   MNGDDAFARRPRDDAQISEKLRKAFDDIAKYFSKKEWEKMKSSEKIVYVYMKLNYEVMTK 60
           MNGDDAFARRP   AQI EK++KAFDDIAKYFSK+EWEKMK+SEKI YVYMK  YE MTK
Sbjct: 1   MNGDDAFARRPTVGAQIPEKIQKAFDDIAKYFSKEEWEKMKASEKIFYVYMKRKYEAMTK 60

Query: 61  LGFKVTLPPFMRSKRAADFHGNDFGNDRNHRNQVERPQMTFGSLQRIFPK 110
           LGFK TLPPFM +KRA DF GND  ND N  NQVERPQMTFG LQ I PK
Sbjct: 61  LGFKATLPPFMCNKRAEDFQGNDLDNDPNRGNQVERPQMTFGRLQGISPK 110



 Score = 48.1 bits (113), Expect = 3e-06
 Identities = 18/20 (90%), Positives = 20/20 (100%)

Query: 110 KDPKGGNMPGPTDCVRESSW 129
           +DPKGGNMPGPTDCVRE+SW
Sbjct: 204 RDPKGGNMPGPTDCVRENSW 223


>gi|27659730 synovial sarcoma, X breakpoint 6 [Homo sapiens]
          Length = 188

 Score =  164 bits (414), Expect = 4e-41
 Identities = 82/110 (74%), Positives = 88/110 (80%)

Query: 1   MNGDDAFARRPRDDAQISEKLRKAFDDIAKYFSKKEWEKMKSSEKIVYVYMKLNYEVMTK 60
           MNGDDAFA+RPRDDA+ SEK  KAFDDIAKYFSK+EWEKMK SEKI  V+MK  YE MTK
Sbjct: 1   MNGDDAFAKRPRDDAKASEKRSKAFDDIAKYFSKEEWEKMKFSEKISCVHMKRKYEAMTK 60

Query: 61  LGFKVTLPPFMRSKRAADFHGNDFGNDRNHRNQVERPQMTFGSLQRIFPK 110
           LGF VTL  FMR+KRA D   ND  NDRN  N+VERPQMTFG LQRI PK
Sbjct: 61  LGFNVTLSLFMRNKRATDSQRNDSDNDRNRGNEVERPQMTFGRLQRIIPK 110


>gi|28559015 synovial sarcoma, X breakpoint 5 isoform a [Homo
           sapiens]
          Length = 229

 Score =  161 bits (407), Expect = 2e-40
 Identities = 86/151 (56%), Positives = 93/151 (61%), Gaps = 41/151 (27%)

Query: 1   MNGDDAFARRPRDDAQISEKLRK------------------------------------- 23
           MNGDDAF RRPR  +QI EK++K                                     
Sbjct: 1   MNGDDAFVRRPRVGSQIPEKMQKHPWRQVCDRGIHLVNLSPFWKVGREPASSIKALLCGR 60

Query: 24  ----AFDDIAKYFSKKEWEKMKSSEKIVYVYMKLNYEVMTKLGFKVTLPPFMRSKRAADF 79
               AFDDIAKYFS+KEWEKMK+SEKI+YVYMK  YE MTKLGFK TLPPFMR+KR ADF
Sbjct: 61  GEARAFDDIAKYFSEKEWEKMKASEKIIYVYMKRKYEAMTKLGFKATLPPFMRNKRVADF 120

Query: 80  HGNDFGNDRNHRNQVERPQMTFGSLQRIFPK 110
            GNDF ND N  NQVE PQMTFG LQ IFPK
Sbjct: 121 QGNDFDNDPNRGNQVEHPQMTFGRLQGIFPK 151


>gi|147905620 PR domain containing 9 [Homo sapiens]
          Length = 894

 Score = 55.5 bits (132), Expect = 2e-08
 Identities = 47/145 (32%), Positives = 69/145 (47%), Gaps = 13/145 (8%)

Query: 1   MNGDDAFARRPRDDAQISEK---LRKAFDDIAKYFSKKEWEKMKSSEKIVYVYMKLNYEV 57
           M+ + +    P +D + +E+   ++ AF DI+ YF+K+EW +M   EK  Y  +K NY  
Sbjct: 1   MSPEKSQEESPEEDTERTERKPMVKDAFKDISIYFTKEEWAEMGDWEKTRYRNVKRNYNA 60

Query: 58  MTKLGFKVTLPPFMRSKRAADFHGNDFGNDRNH----RNQVERPQMTFGSLQRIFPKDPK 113
           +  +G + T P FM  +R A     D   D +     R QV+ P M     QR   K  K
Sbjct: 61  LITIGLRATRPAFMCHRRQAIKLQVDDTEDSDEEWTPRQQVKPPWMALRVEQR---KHQK 117

Query: 114 GGNMPGPTDCVRESSWWFMKRSATL 138
           G  MP       ESS   + R+A L
Sbjct: 118 G--MP-KASFSNESSLKELSRTANL 139


>gi|148271100 PR domain containing 7 isoform 1 [Homo sapiens]
          Length = 492

 Score = 55.1 bits (131), Expect = 2e-08
 Identities = 34/98 (34%), Positives = 51/98 (52%), Gaps = 7/98 (7%)

Query: 11  PRDDAQISEK---LRKAFDDIAKYFSKKEWEKMKSSEKIVYVYMKLNYEVMTKLGFKVTL 67
           P  D + +E+   ++ AF DI+ YF+K+EW +M   EK  Y  +K+NY  +  +G + T 
Sbjct: 11  PEGDTERTERKPMVKDAFKDISIYFTKEEWAEMGDWEKTRYRNVKMNYNALITVGLRATR 70

Query: 68  PPFMRSKRAADFHGNDFGNDRNH----RNQVERPQMTF 101
           P FM  +R A     D   D +     R QV+ P M F
Sbjct: 71  PAFMCHRRQAIKLQVDDTEDSDEEWTPRQQVKPPWMAF 108


>gi|239754759 PREDICTED: similar to zinc finger protein 30 [Homo
           sapiens]
          Length = 546

 Score = 49.3 bits (116), Expect = 1e-06
 Identities = 28/93 (30%), Positives = 52/93 (55%), Gaps = 2/93 (2%)

Query: 9   RRPRDDAQISEKLRKAFDDIAKYFSKKEWEKMKSSEKIVYVY-MKLNYEVMTKLGFKVTL 67
           R P      + K+   FDD+A YFS+ EW K++  +K +Y + M+ NYE +  L + ++ 
Sbjct: 129 RLPPGSKGEAPKVPVTFDDVAVYFSELEWGKLEDWQKELYKHVMRGNYETLVSLDYAISK 188

Query: 68  PPFM-RSKRAADFHGNDFGNDRNHRNQVERPQM 99
           P  + R +R  +   + +G ++ +  +V RP+M
Sbjct: 189 PDILTRIERGEEPCLDRWGQEKGNEVEVGRPRM 221


>gi|239749287 PREDICTED: hypothetical protein XP_002346980 [Homo
           sapiens]
          Length = 546

 Score = 49.3 bits (116), Expect = 1e-06
 Identities = 28/93 (30%), Positives = 52/93 (55%), Gaps = 2/93 (2%)

Query: 9   RRPRDDAQISEKLRKAFDDIAKYFSKKEWEKMKSSEKIVYVY-MKLNYEVMTKLGFKVTL 67
           R P      + K+   FDD+A YFS+ EW K++  +K +Y + M+ NYE +  L + ++ 
Sbjct: 129 RLPPGSKGEAPKVPVTFDDVAVYFSELEWGKLEDWQKELYKHVMRGNYETLVSLDYAISK 188

Query: 68  PPFM-RSKRAADFHGNDFGNDRNHRNQVERPQM 99
           P  + R +R  +   + +G ++ +  +V RP+M
Sbjct: 189 PDILTRIERGEEPCLDRWGQEKGNEVEVGRPRM 221


>gi|239743377 PREDICTED: hypothetical protein XP_002342831 [Homo
           sapiens]
          Length = 546

 Score = 49.3 bits (116), Expect = 1e-06
 Identities = 28/93 (30%), Positives = 52/93 (55%), Gaps = 2/93 (2%)

Query: 9   RRPRDDAQISEKLRKAFDDIAKYFSKKEWEKMKSSEKIVYVY-MKLNYEVMTKLGFKVTL 67
           R P      + K+   FDD+A YFS+ EW K++  +K +Y + M+ NYE +  L + ++ 
Sbjct: 129 RLPPGSKGEAPKVPVTFDDVAVYFSELEWGKLEDWQKELYKHVMRGNYETLVSLDYAISK 188

Query: 68  PPFM-RSKRAADFHGNDFGNDRNHRNQVERPQM 99
           P  + R +R  +   + +G ++ +  +V RP+M
Sbjct: 189 PDILTRIERGEEPCLDRWGQEKGNEVEVGRPRM 221


>gi|239509071 PREDICTED: similar to zinc finger protein 30 [Homo
           sapiens]
          Length = 546

 Score = 49.3 bits (116), Expect = 1e-06
 Identities = 28/93 (30%), Positives = 52/93 (55%), Gaps = 2/93 (2%)

Query: 9   RRPRDDAQISEKLRKAFDDIAKYFSKKEWEKMKSSEKIVYVY-MKLNYEVMTKLGFKVTL 67
           R P      + K+   FDD+A YFS+ EW K++  +K +Y + M+ NYE +  L + ++ 
Sbjct: 129 RLPPGSKGEAPKVPVTFDDVAVYFSELEWGKLEDWQKELYKHVMRGNYETLVSLDYAISK 188

Query: 68  PPFM-RSKRAADFHGNDFGNDRNHRNQVERPQM 99
           P  + R +R  +   + +G ++ +  +V RP+M
Sbjct: 189 PDILTRIERGEEPCLDRWGQEKGNEVEVGRPRM 221


>gi|48717241 zinc finger protein 425 [Homo sapiens]
          Length = 752

 Score = 43.9 bits (102), Expect = 5e-05
 Identities = 20/45 (44%), Positives = 30/45 (66%), Gaps = 1/45 (2%)

Query: 25 FDDIAKYFSKKEWEKMKSSEKIVYVY-MKLNYEVMTKLGFKVTLP 68
          FDD+A YFS++EWE ++  +K +Y   MK NYE +  LG+  + P
Sbjct: 11 FDDVALYFSEQEWEILEKWQKQMYKQEMKTNYETLDSLGYAFSKP 55


>gi|25777704 zinc finger 398 isoform a [Homo sapiens]
          Length = 642

 Score = 42.4 bits (98), Expect = 2e-04
 Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 1/65 (1%)

Query: 20  KLRKAFDDIAKYFSKKEWEKMKSSEKIVYV-YMKLNYEVMTKLGFKVTLPPFMRSKRAAD 78
           K+  AFDD++ YFS  EWEK++  +K +Y   MK NYE +  + + +  P  +   +   
Sbjct: 140 KVPVAFDDVSIYFSTPEWEKLEEWQKELYKNIMKGNYESLISMDYAINQPDVLSQIQPEG 199

Query: 79  FHGND 83
            H  +
Sbjct: 200 EHNTE 204


>gi|149773449 zinc finger protein 862 [Homo sapiens]
          Length = 1169

 Score = 41.6 bits (96), Expect = 3e-04
 Identities = 26/84 (30%), Positives = 45/84 (53%), Gaps = 7/84 (8%)

Query: 17  ISEKLRKAFDDIAKYFSKKEWEKMKSSEKIVY-VYMKLNYEVMTKLGFKVTLPPFMR--S 73
           + E+L   F+D+A YF+++EW  +   +K +Y   M++NYE++  LG     P  +    
Sbjct: 327 VFEELPVVFEDVAVYFTREEWGMLDKRQKELYRDVMRMNYELLASLGPAAAKPDLISKLE 386

Query: 74  KRAA----DFHGNDFGNDRNHRNQ 93
           +RAA    D +G  +G  R   N+
Sbjct: 387 RRAAPWIKDPNGPKWGKGRPPGNK 410


>gi|194018495 zinc finger protein 324B [Homo sapiens]
          Length = 544

 Score = 41.6 bits (96), Expect = 3e-04
 Identities = 25/102 (24%), Positives = 48/102 (47%), Gaps = 12/102 (11%)

Query: 25  FDDIAKYFSKKEWEKMKSSEKIVYVYMKL-NYEVMTKLGFKVTLP-----------PFMR 72
           F+D+A YFS++EW  + ++++ +Y ++ L N+ ++T LG   + P           P++ 
Sbjct: 3   FEDVAVYFSQEEWGLLDTAQRALYRHVMLENFTLVTSLGLSTSRPRVVIQLERGEEPWVP 62

Query: 73  SKRAADFHGNDFGNDRNHRNQVERPQMTFGSLQRIFPKDPKG 114
           S +      N +G   +    +   +   G   R FP  P G
Sbjct: 63  SGKDMTLARNTYGRLNSGSWSLTEDRDVSGEWPRAFPDTPPG 104


>gi|22027480 pogo transposable element with KRAB domain [Homo
          sapiens]
          Length = 609

 Score = 39.7 bits (91), Expect = 0.001
 Identities = 18/45 (40%), Positives = 27/45 (60%), Gaps = 1/45 (2%)

Query: 25 FDDIAKYFSKKEWEKMKSSEKIVY-VYMKLNYEVMTKLGFKVTLP 68
          FD++A YFS +EWE +   +K +Y   M++NYE +  L F    P
Sbjct: 49 FDEVAIYFSDEEWEVLTEQQKALYREVMRMNYETVLSLEFPFPKP 93


>gi|210147475 zinc finger protein 92 homolog [Homo sapiens]
          Length = 416

 Score = 38.9 bits (89), Expect = 0.002
 Identities = 17/50 (34%), Positives = 31/50 (62%), Gaps = 1/50 (2%)

Query: 20 KLRKAFDDIAKYFSKKEWEKMKSSEKIVYVYMKL-NYEVMTKLGFKVTLP 68
          K+  +F+D++ YF+K EW+ +   +K++Y  + L NY  +  LGF  + P
Sbjct: 11 KVPVSFEDVSVYFTKTEWKLLDLRQKVLYKRVMLENYSHLVSLGFSFSKP 60


>gi|154759253 zinc finger protein 404 [Homo sapiens]
          Length = 552

 Score = 38.9 bits (89), Expect = 0.002
 Identities = 26/90 (28%), Positives = 43/90 (47%), Gaps = 7/90 (7%)

Query: 25  FDDIAKYFSKKEWEKMKSSEKIVYVYMKL-NYEVMTKLGFKVTLPPFMRSKRAADFHGND 83
           F D+A  FS++EWE + S ++ +Y  + L NY  +  L F  T      S    ++  N 
Sbjct: 8   FSDVAIDFSQEEWEYLNSDQRDLYRDVMLENYTNLVSLDFNFTTESNKLSSEKRNYEVNA 67

Query: 84  FGNDRNHRNQVERPQMTFGSLQRIFPKDPK 113
           +  +   RN+      TF  ++ IF  DP+
Sbjct: 68  YHQETWKRNK------TFNLMRFIFRTDPQ 91


>gi|167830431 zinc finger protein 530 [Homo sapiens]
          Length = 599

 Score = 38.1 bits (87), Expect = 0.003
 Identities = 17/40 (42%), Positives = 28/40 (70%), Gaps = 1/40 (2%)

Query: 24 AFDDIAKYFSKKEWEKMKSSEKIVYVYMKL-NYEVMTKLG 62
          AF+D+A YFS++EWE +   ++++Y  + L N+ VM  LG
Sbjct: 15 AFEDVAIYFSQEEWELLDEMQRLLYRDVMLENFAVMASLG 54


>gi|118918411 zinc finger protein 777 [Homo sapiens]
          Length = 831

 Score = 37.7 bits (86), Expect = 0.004
 Identities = 17/53 (32%), Positives = 31/53 (58%), Gaps = 1/53 (1%)

Query: 20  KLRKAFDDIAKYFSKKEWEKMKSSEKIVYV-YMKLNYEVMTKLGFKVTLPPFM 71
           K+   FDD+A +FS++EW  +   +K +Y   M+ NYE +  + + ++ P  M
Sbjct: 282 KVPVTFDDVAVHFSEQEWGNLSEWQKELYKNVMRGNYESLVSMDYAISKPDLM 334



 Score = 26.9 bits (58), Expect = 6.8
 Identities = 16/45 (35%), Positives = 19/45 (42%), Gaps = 1/45 (2%)

Query: 109 PKDPKGGNMPGPTDCVRESSWWFMKRSATLRKMTSNSPRGYDTCP 153
           P    GG  P P  C    S +  K S T  ++T    R Y TCP
Sbjct: 624 PSSGSGGGGPKPYKCPECDSSFSHKSSLTKHQITHTGERPY-TCP 667


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.319    0.134    0.418 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,223,473
Number of Sequences: 37866
Number of extensions: 257795
Number of successful extensions: 953
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 154
Number of HSP's successfully gapped in prelim test: 183
Number of HSP's that attempted gapping in prelim test: 792
Number of HSP's gapped (non-prelim): 342
length of query: 153
length of database: 18,247,518
effective HSP length: 93
effective length of query: 60
effective length of database: 14,725,980
effective search space: 883558800
effective search space used: 883558800
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 57 (26.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.