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Search of human proteins with 28559009
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|28559009 synovial sarcoma, X breakpoint 3 isoform b [Homo
sapiens]
(170 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|28559009 synovial sarcoma, X breakpoint 3 isoform b [Homo sap... 352 9e-98
gi|10337601 synovial sarcoma, X breakpoint 3 isoform a [Homo sap... 323 6e-89
gi|239746831 PREDICTED: synovial sarcoma, X breakpoint 2B [Homo ... 287 3e-78
gi|28559006 synovial sarcoma, X breakpoint 2 isoform b [Homo sap... 287 3e-78
gi|27659724 synovial sarcoma, X breakpoint 2 isoform a [Homo sap... 287 3e-78
gi|28559017 synovial sarcoma, X breakpoint 5 isoform b [Homo sap... 271 2e-73
gi|27902281 synovial sarcoma, X breakpoint 9 [Homo sapiens] 270 6e-73
gi|27659732 synovial sarcoma, X breakpoint 7 [Homo sapiens] 264 3e-71
gi|28559015 synovial sarcoma, X breakpoint 5 isoform a [Homo sap... 251 2e-67
gi|5032123 synovial sarcoma, X breakpoint 4 isoform a [Homo sapi... 249 8e-67
gi|83367081 synovial sarcoma, X breakpoint 4B isoform a [Homo sa... 249 8e-67
gi|27659730 synovial sarcoma, X breakpoint 6 [Homo sapiens] 234 2e-62
gi|5032121 synovial sarcoma, X breakpoint 1 [Homo sapiens] 228 2e-60
gi|28559013 synovial sarcoma, X breakpoint 4 isoform b [Homo sap... 173 7e-44
gi|94983919 synovial sarcoma, X breakpoint 4B isoform b [Homo sa... 173 7e-44
gi|239752309 PREDICTED: hypothetical protein XP_002348195 [Homo ... 94 7e-20
gi|147905620 PR domain containing 9 [Homo sapiens] 65 4e-11
gi|148271100 PR domain containing 7 isoform 1 [Homo sapiens] 64 6e-11
gi|239754759 PREDICTED: similar to zinc finger protein 30 [Homo ... 42 2e-04
gi|239749287 PREDICTED: hypothetical protein XP_002346980 [Homo ... 42 2e-04
gi|239743377 PREDICTED: hypothetical protein XP_002342831 [Homo ... 42 2e-04
gi|239509071 PREDICTED: similar to zinc finger protein 30 [Homo ... 42 2e-04
gi|48717241 zinc finger protein 425 [Homo sapiens] 42 2e-04
gi|25777704 zinc finger 398 isoform a [Homo sapiens] 42 3e-04
gi|118918411 zinc finger protein 777 [Homo sapiens] 40 7e-04
gi|21699074 zinc finger protein 688 isoform a [Homo sapiens] 40 7e-04
gi|41152070 zinc finger protein 75 [Homo sapiens] 38 0.004
gi|210147475 zinc finger protein 92 homolog [Homo sapiens] 38 0.005
gi|170932473 zinc finger protein 786 [Homo sapiens] 38 0.005
gi|149773449 zinc finger protein 862 [Homo sapiens] 37 0.006
>gi|28559009 synovial sarcoma, X breakpoint 3 isoform b [Homo
sapiens]
Length = 170
Score = 352 bits (903), Expect = 9e-98
Identities = 170/170 (100%), Positives = 170/170 (100%)
Query: 1 MNGDDTFARRPTVGAQIPEKIQKAFDDIAKYFSKEEWEKMKVSEKIVYVYMKRKYEAMTK 60
MNGDDTFARRPTVGAQIPEKIQKAFDDIAKYFSKEEWEKMKVSEKIVYVYMKRKYEAMTK
Sbjct: 1 MNGDDTFARRPTVGAQIPEKIQKAFDDIAKYFSKEEWEKMKVSEKIVYVYMKRKYEAMTK 60
Query: 61 LGFKAILPSFMRNKRVTDFQGNDFDNDPNRGNQVQRPQMTFGRLQGIFPKIMPKKPAEEG 120
LGFKAILPSFMRNKRVTDFQGNDFDNDPNRGNQVQRPQMTFGRLQGIFPKIMPKKPAEEG
Sbjct: 61 LGFKAILPSFMRNKRVTDFQGNDFDNDPNRGNQVQRPQMTFGRLQGIFPKIMPKKPAEEG 120
Query: 121 NVSKEVPEASGPQNDGKQLCPPGKPTTSEKINMISGVLQRYCRFGSRPLQ 170
NVSKEVPEASGPQNDGKQLCPPGKPTTSEKINMISGVLQRYCRFGSRPLQ
Sbjct: 121 NVSKEVPEASGPQNDGKQLCPPGKPTTSEKINMISGVLQRYCRFGSRPLQ 170
>gi|10337601 synovial sarcoma, X breakpoint 3 isoform a [Homo
sapiens]
Length = 188
Score = 323 bits (827), Expect = 6e-89
Identities = 156/156 (100%), Positives = 156/156 (100%)
Query: 1 MNGDDTFARRPTVGAQIPEKIQKAFDDIAKYFSKEEWEKMKVSEKIVYVYMKRKYEAMTK 60
MNGDDTFARRPTVGAQIPEKIQKAFDDIAKYFSKEEWEKMKVSEKIVYVYMKRKYEAMTK
Sbjct: 1 MNGDDTFARRPTVGAQIPEKIQKAFDDIAKYFSKEEWEKMKVSEKIVYVYMKRKYEAMTK 60
Query: 61 LGFKAILPSFMRNKRVTDFQGNDFDNDPNRGNQVQRPQMTFGRLQGIFPKIMPKKPAEEG 120
LGFKAILPSFMRNKRVTDFQGNDFDNDPNRGNQVQRPQMTFGRLQGIFPKIMPKKPAEEG
Sbjct: 61 LGFKAILPSFMRNKRVTDFQGNDFDNDPNRGNQVQRPQMTFGRLQGIFPKIMPKKPAEEG 120
Query: 121 NVSKEVPEASGPQNDGKQLCPPGKPTTSEKINMISG 156
NVSKEVPEASGPQNDGKQLCPPGKPTTSEKINMISG
Sbjct: 121 NVSKEVPEASGPQNDGKQLCPPGKPTTSEKINMISG 156
>gi|239746831 PREDICTED: synovial sarcoma, X breakpoint 2B [Homo
sapiens]
Length = 188
Score = 287 bits (735), Expect = 3e-78
Identities = 139/156 (89%), Positives = 143/156 (91%)
Query: 1 MNGDDTFARRPTVGAQIPEKIQKAFDDIAKYFSKEEWEKMKVSEKIVYVYMKRKYEAMTK 60
MNGDD FARRPTVGAQIPEKIQKAFDDIAKYFSKEEWEKMK SEKI YVYMKRKYEAMTK
Sbjct: 1 MNGDDAFARRPTVGAQIPEKIQKAFDDIAKYFSKEEWEKMKASEKIFYVYMKRKYEAMTK 60
Query: 61 LGFKAILPSFMRNKRVTDFQGNDFDNDPNRGNQVQRPQMTFGRLQGIFPKIMPKKPAEEG 120
LGFKA LP FM NKR DFQGND DNDPNRGNQV+RPQMTFGRLQGI PKIMPKKPAEEG
Sbjct: 61 LGFKATLPPFMCNKRAEDFQGNDLDNDPNRGNQVERPQMTFGRLQGISPKIMPKKPAEEG 120
Query: 121 NVSKEVPEASGPQNDGKQLCPPGKPTTSEKINMISG 156
N S+EVPEASGPQNDGK+LCPPGKPTTSEKI+ SG
Sbjct: 121 NDSEEVPEASGPQNDGKELCPPGKPTTSEKIHERSG 156
>gi|28559006 synovial sarcoma, X breakpoint 2 isoform b [Homo
sapiens]
Length = 188
Score = 287 bits (735), Expect = 3e-78
Identities = 139/156 (89%), Positives = 143/156 (91%)
Query: 1 MNGDDTFARRPTVGAQIPEKIQKAFDDIAKYFSKEEWEKMKVSEKIVYVYMKRKYEAMTK 60
MNGDD FARRPTVGAQIPEKIQKAFDDIAKYFSKEEWEKMK SEKI YVYMKRKYEAMTK
Sbjct: 1 MNGDDAFARRPTVGAQIPEKIQKAFDDIAKYFSKEEWEKMKASEKIFYVYMKRKYEAMTK 60
Query: 61 LGFKAILPSFMRNKRVTDFQGNDFDNDPNRGNQVQRPQMTFGRLQGIFPKIMPKKPAEEG 120
LGFKA LP FM NKR DFQGND DNDPNRGNQV+RPQMTFGRLQGI PKIMPKKPAEEG
Sbjct: 61 LGFKATLPPFMCNKRAEDFQGNDLDNDPNRGNQVERPQMTFGRLQGISPKIMPKKPAEEG 120
Query: 121 NVSKEVPEASGPQNDGKQLCPPGKPTTSEKINMISG 156
N S+EVPEASGPQNDGK+LCPPGKPTTSEKI+ SG
Sbjct: 121 NDSEEVPEASGPQNDGKELCPPGKPTTSEKIHERSG 156
>gi|27659724 synovial sarcoma, X breakpoint 2 isoform a [Homo
sapiens]
Length = 223
Score = 287 bits (735), Expect = 3e-78
Identities = 139/156 (89%), Positives = 143/156 (91%)
Query: 1 MNGDDTFARRPTVGAQIPEKIQKAFDDIAKYFSKEEWEKMKVSEKIVYVYMKRKYEAMTK 60
MNGDD FARRPTVGAQIPEKIQKAFDDIAKYFSKEEWEKMK SEKI YVYMKRKYEAMTK
Sbjct: 1 MNGDDAFARRPTVGAQIPEKIQKAFDDIAKYFSKEEWEKMKASEKIFYVYMKRKYEAMTK 60
Query: 61 LGFKAILPSFMRNKRVTDFQGNDFDNDPNRGNQVQRPQMTFGRLQGIFPKIMPKKPAEEG 120
LGFKA LP FM NKR DFQGND DNDPNRGNQV+RPQMTFGRLQGI PKIMPKKPAEEG
Sbjct: 61 LGFKATLPPFMCNKRAEDFQGNDLDNDPNRGNQVERPQMTFGRLQGISPKIMPKKPAEEG 120
Query: 121 NVSKEVPEASGPQNDGKQLCPPGKPTTSEKINMISG 156
N S+EVPEASGPQNDGK+LCPPGKPTTSEKI+ SG
Sbjct: 121 NDSEEVPEASGPQNDGKELCPPGKPTTSEKIHERSG 156
>gi|28559017 synovial sarcoma, X breakpoint 5 isoform b [Homo
sapiens]
Length = 188
Score = 271 bits (694), Expect = 2e-73
Identities = 130/156 (83%), Positives = 139/156 (89%)
Query: 1 MNGDDTFARRPTVGAQIPEKIQKAFDDIAKYFSKEEWEKMKVSEKIVYVYMKRKYEAMTK 60
MNGDD F RRP VG+QIPEK+QKAFDDIAKYFS++EWEKMK SEKI+YVYMKRKYEAMTK
Sbjct: 1 MNGDDAFVRRPRVGSQIPEKMQKAFDDIAKYFSEKEWEKMKASEKIIYVYMKRKYEAMTK 60
Query: 61 LGFKAILPSFMRNKRVTDFQGNDFDNDPNRGNQVQRPQMTFGRLQGIFPKIMPKKPAEEG 120
LGFKA LP FMRNKRV DFQGNDFDNDPNRGNQV+ PQMTFGRLQGIFPKI P+KPAEEG
Sbjct: 61 LGFKATLPPFMRNKRVADFQGNDFDNDPNRGNQVEHPQMTFGRLQGIFPKITPEKPAEEG 120
Query: 121 NVSKEVPEASGPQNDGKQLCPPGKPTTSEKINMISG 156
N SK VPEASGPQN+GKQL P GK TSEK+N SG
Sbjct: 121 NDSKGVPEASGPQNNGKQLRPSGKLNTSEKVNKTSG 156
>gi|27902281 synovial sarcoma, X breakpoint 9 [Homo sapiens]
Length = 188
Score = 270 bits (689), Expect = 6e-73
Identities = 132/156 (84%), Positives = 136/156 (87%)
Query: 1 MNGDDTFARRPTVGAQIPEKIQKAFDDIAKYFSKEEWEKMKVSEKIVYVYMKRKYEAMTK 60
MNGDD FARRP G+QIPEKIQKAFDDIAKYFSK+EWEKMK SEKI+YVYMKRKYEAMTK
Sbjct: 1 MNGDDAFARRPRAGSQIPEKIQKAFDDIAKYFSKKEWEKMKSSEKIIYVYMKRKYEAMTK 60
Query: 61 LGFKAILPSFMRNKRVTDFQGNDFDNDPNRGNQVQRPQMTFGRLQGIFPKIMPKKPAEEG 120
LGFKA LP FM N TD QGNDFDND N NQV+R QMTFGRLQGIFPKIMPKKPAE G
Sbjct: 61 LGFKATLPPFMCNTGATDLQGNDFDNDRNHRNQVERSQMTFGRLQGIFPKIMPKKPAEVG 120
Query: 121 NVSKEVPEASGPQNDGKQLCPPGKPTTSEKINMISG 156
N SKEVPEASG QNDGKQLCPPGKPTTSEKIN SG
Sbjct: 121 NDSKEVPEASGLQNDGKQLCPPGKPTTSEKINKASG 156
>gi|27659732 synovial sarcoma, X breakpoint 7 [Homo sapiens]
Length = 188
Score = 264 bits (674), Expect = 3e-71
Identities = 129/156 (82%), Positives = 134/156 (85%)
Query: 1 MNGDDTFARRPTVGAQIPEKIQKAFDDIAKYFSKEEWEKMKVSEKIVYVYMKRKYEAMTK 60
MNGDD FARRP GAQIPEKIQK+FDDIAKYFSK+EWEKMK EKI YVYMKRKYEAMTK
Sbjct: 1 MNGDDAFARRPRAGAQIPEKIQKSFDDIAKYFSKKEWEKMKSLEKISYVYMKRKYEAMTK 60
Query: 61 LGFKAILPSFMRNKRVTDFQGNDFDNDPNRGNQVQRPQMTFGRLQGIFPKIMPKKPAEEG 120
LGFKA LP FM N TD QGNDFDND N+GNQV+RPQMTF RLQ IFPKIMPKKPAEEG
Sbjct: 61 LGFKATLPPFMHNTGATDLQGNDFDNDRNQGNQVERPQMTFCRLQRIFPKIMPKKPAEEG 120
Query: 121 NVSKEVPEASGPQNDGKQLCPPGKPTTSEKINMISG 156
N SK VPEASG QNDGK LCPPGKP+TSEKIN SG
Sbjct: 121 NDSKGVPEASGSQNDGKHLCPPGKPSTSEKINKTSG 156
>gi|28559015 synovial sarcoma, X breakpoint 5 isoform a [Homo
sapiens]
Length = 229
Score = 251 bits (642), Expect = 2e-67
Identities = 130/197 (65%), Positives = 139/197 (70%), Gaps = 41/197 (20%)
Query: 1 MNGDDTFARRPTVGAQIPEKIQK------------------------------------- 23
MNGDD F RRP VG+QIPEK+QK
Sbjct: 1 MNGDDAFVRRPRVGSQIPEKMQKHPWRQVCDRGIHLVNLSPFWKVGREPASSIKALLCGR 60
Query: 24 ----AFDDIAKYFSKEEWEKMKVSEKIVYVYMKRKYEAMTKLGFKAILPSFMRNKRVTDF 79
AFDDIAKYFS++EWEKMK SEKI+YVYMKRKYEAMTKLGFKA LP FMRNKRV DF
Sbjct: 61 GEARAFDDIAKYFSEKEWEKMKASEKIIYVYMKRKYEAMTKLGFKATLPPFMRNKRVADF 120
Query: 80 QGNDFDNDPNRGNQVQRPQMTFGRLQGIFPKIMPKKPAEEGNVSKEVPEASGPQNDGKQL 139
QGNDFDNDPNRGNQV+ PQMTFGRLQGIFPKI P+KPAEEGN SK VPEASGPQN+GKQL
Sbjct: 121 QGNDFDNDPNRGNQVEHPQMTFGRLQGIFPKITPEKPAEEGNDSKGVPEASGPQNNGKQL 180
Query: 140 CPPGKPTTSEKINMISG 156
P GK TSEK+N SG
Sbjct: 181 RPSGKLNTSEKVNKTSG 197
>gi|5032123 synovial sarcoma, X breakpoint 4 isoform a [Homo
sapiens]
Length = 188
Score = 249 bits (636), Expect = 8e-67
Identities = 122/156 (78%), Positives = 128/156 (82%)
Query: 1 MNGDDTFARRPTVGAQIPEKIQKAFDDIAKYFSKEEWEKMKVSEKIVYVYMKRKYEAMTK 60
MNGDD FARRP AQI EK++KAFDDIAKYFSK+EWEKMK SEKIVYVYMK YE MTK
Sbjct: 1 MNGDDAFARRPRDDAQISEKLRKAFDDIAKYFSKKEWEKMKSSEKIVYVYMKLNYEVMTK 60
Query: 61 LGFKAILPSFMRNKRVTDFQGNDFDNDPNRGNQVQRPQMTFGRLQGIFPKIMPKKPAEEG 120
LGFK LP FMR+KR DF GNDF ND N NQV+RPQMTFG LQ IFPKIMPKKPAEE
Sbjct: 61 LGFKVTLPPFMRSKRAADFHGNDFGNDRNHRNQVERPQMTFGSLQRIFPKIMPKKPAEEE 120
Query: 121 NVSKEVPEASGPQNDGKQLCPPGKPTTSEKINMISG 156
N KEVPEASGPQNDGKQLCPPG P+T EKIN SG
Sbjct: 121 NGLKEVPEASGPQNDGKQLCPPGNPSTLEKINKTSG 156
>gi|83367081 synovial sarcoma, X breakpoint 4B isoform a [Homo
sapiens]
Length = 188
Score = 249 bits (636), Expect = 8e-67
Identities = 122/156 (78%), Positives = 128/156 (82%)
Query: 1 MNGDDTFARRPTVGAQIPEKIQKAFDDIAKYFSKEEWEKMKVSEKIVYVYMKRKYEAMTK 60
MNGDD FARRP AQI EK++KAFDDIAKYFSK+EWEKMK SEKIVYVYMK YE MTK
Sbjct: 1 MNGDDAFARRPRDDAQISEKLRKAFDDIAKYFSKKEWEKMKSSEKIVYVYMKLNYEVMTK 60
Query: 61 LGFKAILPSFMRNKRVTDFQGNDFDNDPNRGNQVQRPQMTFGRLQGIFPKIMPKKPAEEG 120
LGFK LP FMR+KR DF GNDF ND N NQV+RPQMTFG LQ IFPKIMPKKPAEE
Sbjct: 61 LGFKVTLPPFMRSKRAADFHGNDFGNDRNHRNQVERPQMTFGSLQRIFPKIMPKKPAEEE 120
Query: 121 NVSKEVPEASGPQNDGKQLCPPGKPTTSEKINMISG 156
N KEVPEASGPQNDGKQLCPPG P+T EKIN SG
Sbjct: 121 NGLKEVPEASGPQNDGKQLCPPGNPSTLEKINKTSG 156
>gi|27659730 synovial sarcoma, X breakpoint 6 [Homo sapiens]
Length = 188
Score = 234 bits (598), Expect = 2e-62
Identities = 117/156 (75%), Positives = 128/156 (82%)
Query: 1 MNGDDTFARRPTVGAQIPEKIQKAFDDIAKYFSKEEWEKMKVSEKIVYVYMKRKYEAMTK 60
MNGDD FA+RP A+ EK KAFDDIAKYFSKEEWEKMK SEKI V+MKRKYEAMTK
Sbjct: 1 MNGDDAFAKRPRDDAKASEKRSKAFDDIAKYFSKEEWEKMKFSEKISCVHMKRKYEAMTK 60
Query: 61 LGFKAILPSFMRNKRVTDFQGNDFDNDPNRGNQVQRPQMTFGRLQGIFPKIMPKKPAEEG 120
LGF L FMRNKR TD Q ND DND NRGN+V+RPQMTFGRLQ I PKIMP+KPAEEG
Sbjct: 61 LGFNVTLSLFMRNKRATDSQRNDSDNDRNRGNEVERPQMTFGRLQRIIPKIMPEKPAEEG 120
Query: 121 NVSKEVPEASGPQNDGKQLCPPGKPTTSEKINMISG 156
+ SK VPEASGPQNDGK+LCPPGK ++SEKI+ SG
Sbjct: 121 SDSKGVPEASGPQNDGKKLCPPGKASSSEKIHERSG 156
>gi|5032121 synovial sarcoma, X breakpoint 1 [Homo sapiens]
Length = 188
Score = 228 bits (581), Expect = 2e-60
Identities = 115/156 (73%), Positives = 123/156 (78%)
Query: 1 MNGDDTFARRPTVGAQIPEKIQKAFDDIAKYFSKEEWEKMKVSEKIVYVYMKRKYEAMTK 60
MNGDDTFA+RP A+ EK KAFDDIA YFSK+EW+KMK SEKI YVYMKR Y+AMTK
Sbjct: 1 MNGDDTFAKRPRDDAKASEKRSKAFDDIATYFSKKEWKKMKYSEKISYVYMKRNYKAMTK 60
Query: 61 LGFKAILPSFMRNKRVTDFQGNDFDNDPNRGNQVQRPQMTFGRLQGIFPKIMPKKPAEEG 120
LGFK LP FM NK+ TDFQGNDFDND NR QV+ PQMTFGRL I PKIMPKKPAE+
Sbjct: 61 LGFKVTLPPFMCNKQATDFQGNDFDNDHNRRIQVEHPQMTFGRLHRIIPKIMPKKPAEDE 120
Query: 121 NVSKEVPEASGPQNDGKQLCPPGKPTTSEKINMISG 156
N SK V EASGPQNDGKQL PPGK SEKIN SG
Sbjct: 121 NDSKGVSEASGPQNDGKQLHPPGKANISEKINKRSG 156
>gi|28559013 synovial sarcoma, X breakpoint 4 isoform b [Homo
sapiens]
Length = 153
Score = 173 bits (438), Expect = 7e-44
Identities = 84/110 (76%), Positives = 89/110 (80%)
Query: 1 MNGDDTFARRPTVGAQIPEKIQKAFDDIAKYFSKEEWEKMKVSEKIVYVYMKRKYEAMTK 60
MNGDD FARRP AQI EK++KAFDDIAKYFSK+EWEKMK SEKIVYVYMK YE MTK
Sbjct: 1 MNGDDAFARRPRDDAQISEKLRKAFDDIAKYFSKKEWEKMKSSEKIVYVYMKLNYEVMTK 60
Query: 61 LGFKAILPSFMRNKRVTDFQGNDFDNDPNRGNQVQRPQMTFGRLQGIFPK 110
LGFK LP FMR+KR DF GNDF ND N NQV+RPQMTFG LQ IFPK
Sbjct: 61 LGFKVTLPPFMRSKRAADFHGNDFGNDRNHRNQVERPQMTFGSLQRIFPK 110
>gi|94983919 synovial sarcoma, X breakpoint 4B isoform b [Homo
sapiens]
Length = 153
Score = 173 bits (438), Expect = 7e-44
Identities = 84/110 (76%), Positives = 89/110 (80%)
Query: 1 MNGDDTFARRPTVGAQIPEKIQKAFDDIAKYFSKEEWEKMKVSEKIVYVYMKRKYEAMTK 60
MNGDD FARRP AQI EK++KAFDDIAKYFSK+EWEKMK SEKIVYVYMK YE MTK
Sbjct: 1 MNGDDAFARRPRDDAQISEKLRKAFDDIAKYFSKKEWEKMKSSEKIVYVYMKLNYEVMTK 60
Query: 61 LGFKAILPSFMRNKRVTDFQGNDFDNDPNRGNQVQRPQMTFGRLQGIFPK 110
LGFK LP FMR+KR DF GNDF ND N NQV+RPQMTFG LQ IFPK
Sbjct: 61 LGFKVTLPPFMRSKRAADFHGNDFGNDRNHRNQVERPQMTFGSLQRIFPK 110
>gi|239752309 PREDICTED: hypothetical protein XP_002348195 [Homo
sapiens]
Length = 102
Score = 93.6 bits (231), Expect = 7e-20
Identities = 47/63 (74%), Positives = 49/63 (77%)
Query: 94 VQRPQMTFGRLQGIFPKIMPKKPAEEGNVSKEVPEASGPQNDGKQLCPPGKPTTSEKINM 153
V+ PQMTFGRL I PKIMPKKPAE+ N SK V EASGPQNDGKQL PPGK SEKIN
Sbjct: 37 VEHPQMTFGRLHRIIPKIMPKKPAEDENDSKGVSEASGPQNDGKQLHPPGKANISEKINK 96
Query: 154 ISG 156
SG
Sbjct: 97 RSG 99
>gi|147905620 PR domain containing 9 [Homo sapiens]
Length = 894
Score = 64.7 bits (156), Expect = 4e-11
Identities = 47/140 (33%), Positives = 70/140 (50%), Gaps = 14/140 (10%)
Query: 21 IQKAFDDIAKYFSKEEWEKMKVSEKIVYVYMKRKYEAMTKLGFKAILPSFMRNKR----- 75
++ AF DI+ YF+KEEW +M EK Y +KR Y A+ +G +A P+FM ++R
Sbjct: 24 VKDAFKDISIYFTKEEWAEMGDWEKTRYRNVKRNYNALITIGLRATRPAFMCHRRQAIKL 83
Query: 76 -VTDFQGNDFDNDPNRGNQVQRPQMTFGRLQGIFPKIMPKKPAEEGNVSKEVP------E 128
V D + +D + P + QV+ P M Q K MPK + KE+
Sbjct: 84 QVDDTEDSDEEWTPRQ--QVKPPWMALRVEQRKHQKGMPKASFSNESSLKELSRTANLLN 141
Query: 129 ASGPQNDGKQLCPPGKPTTS 148
ASG + K + P G+ +TS
Sbjct: 142 ASGSEQAQKPVSPSGEASTS 161
>gi|148271100 PR domain containing 7 isoform 1 [Homo sapiens]
Length = 492
Score = 63.9 bits (154), Expect = 6e-11
Identities = 47/152 (30%), Positives = 75/152 (49%), Gaps = 14/152 (9%)
Query: 21 IQKAFDDIAKYFSKEEWEKMKVSEKIVYVYMKRKYEAMTKLGFKAILPSFMRNKR----- 75
++ AF DI+ YF+KEEW +M EK Y +K Y A+ +G +A P+FM ++R
Sbjct: 24 VKDAFKDISIYFTKEEWAEMGDWEKTRYRNVKMNYNALITVGLRATRPAFMCHRRQAIKL 83
Query: 76 -VTDFQGNDFDNDPNRGNQVQRPQMTFGRLQGIFPKIMPKKPAEEGNVSKEVP------E 128
V D + +D + P + QV+ P M F Q K MPK + +E+
Sbjct: 84 QVDDTEDSDEEWTPRQ--QVKPPWMAFRGEQSKHQKGMPKASFNNESSLRELSGTPNLLN 141
Query: 129 ASGPQNDGKQLCPPGKPTTSEKINMISGVLQR 160
S + K + PPG+ +TS + + + L+R
Sbjct: 142 TSDSEQAQKPVSPPGEASTSGQHSRLKLELRR 173
>gi|239754759 PREDICTED: similar to zinc finger protein 30 [Homo
sapiens]
Length = 546
Score = 42.4 bits (98), Expect = 2e-04
Identities = 39/134 (29%), Positives = 63/134 (47%), Gaps = 16/134 (11%)
Query: 20 KIQKAFDDIAKYFSKEEWEKMKVSEKIVYVY-MKRKYEAMTKLGFKAILPSFMRNKRVTD 78
K+ FDD+A YFS+ EW K++ +K +Y + M+ YE + L + P + R+
Sbjct: 140 KVPVTFDDVAVYFSELEWGKLEDWQKELYKHVMRGNYETLVSLDYAISKPDIL--TRIER 197
Query: 79 FQGNDFDN-DPNRGNQVQ--RPQMTFGRLQGIFPKIM--PKKPAEEGNVSKEVPEASGP- 132
+ D +GN+V+ RP+M G +P+ + P PA+E E+ E P
Sbjct: 198 GEEPCLDRWGQEKGNEVEVGRPRM-MGTGLPPYPEHLTSPLSPAQE-----ELKEGQAPK 251
Query: 133 -QNDGKQLCPPGKP 145
Q D + P P
Sbjct: 252 QQQDSEARVAPAGP 265
>gi|239749287 PREDICTED: hypothetical protein XP_002346980 [Homo
sapiens]
Length = 546
Score = 42.4 bits (98), Expect = 2e-04
Identities = 39/134 (29%), Positives = 63/134 (47%), Gaps = 16/134 (11%)
Query: 20 KIQKAFDDIAKYFSKEEWEKMKVSEKIVYVY-MKRKYEAMTKLGFKAILPSFMRNKRVTD 78
K+ FDD+A YFS+ EW K++ +K +Y + M+ YE + L + P + R+
Sbjct: 140 KVPVTFDDVAVYFSELEWGKLEDWQKELYKHVMRGNYETLVSLDYAISKPDIL--TRIER 197
Query: 79 FQGNDFDN-DPNRGNQVQ--RPQMTFGRLQGIFPKIM--PKKPAEEGNVSKEVPEASGP- 132
+ D +GN+V+ RP+M G +P+ + P PA+E E+ E P
Sbjct: 198 GEEPCLDRWGQEKGNEVEVGRPRM-MGTGLPPYPEHLTSPLSPAQE-----ELKEGQAPK 251
Query: 133 -QNDGKQLCPPGKP 145
Q D + P P
Sbjct: 252 QQQDSEARVAPAGP 265
>gi|239743377 PREDICTED: hypothetical protein XP_002342831 [Homo
sapiens]
Length = 546
Score = 42.4 bits (98), Expect = 2e-04
Identities = 39/134 (29%), Positives = 63/134 (47%), Gaps = 16/134 (11%)
Query: 20 KIQKAFDDIAKYFSKEEWEKMKVSEKIVYVY-MKRKYEAMTKLGFKAILPSFMRNKRVTD 78
K+ FDD+A YFS+ EW K++ +K +Y + M+ YE + L + P + R+
Sbjct: 140 KVPVTFDDVAVYFSELEWGKLEDWQKELYKHVMRGNYETLVSLDYAISKPDIL--TRIER 197
Query: 79 FQGNDFDN-DPNRGNQVQ--RPQMTFGRLQGIFPKIM--PKKPAEEGNVSKEVPEASGP- 132
+ D +GN+V+ RP+M G +P+ + P PA+E E+ E P
Sbjct: 198 GEEPCLDRWGQEKGNEVEVGRPRM-MGTGLPPYPEHLTSPLSPAQE-----ELKEGQAPK 251
Query: 133 -QNDGKQLCPPGKP 145
Q D + P P
Sbjct: 252 QQQDSEARVAPAGP 265
>gi|239509071 PREDICTED: similar to zinc finger protein 30 [Homo
sapiens]
Length = 546
Score = 42.4 bits (98), Expect = 2e-04
Identities = 39/134 (29%), Positives = 63/134 (47%), Gaps = 16/134 (11%)
Query: 20 KIQKAFDDIAKYFSKEEWEKMKVSEKIVYVY-MKRKYEAMTKLGFKAILPSFMRNKRVTD 78
K+ FDD+A YFS+ EW K++ +K +Y + M+ YE + L + P + R+
Sbjct: 140 KVPVTFDDVAVYFSELEWGKLEDWQKELYKHVMRGNYETLVSLDYAISKPDIL--TRIER 197
Query: 79 FQGNDFDN-DPNRGNQVQ--RPQMTFGRLQGIFPKIM--PKKPAEEGNVSKEVPEASGP- 132
+ D +GN+V+ RP+M G +P+ + P PA+E E+ E P
Sbjct: 198 GEEPCLDRWGQEKGNEVEVGRPRM-MGTGLPPYPEHLTSPLSPAQE-----ELKEGQAPK 251
Query: 133 -QNDGKQLCPPGKP 145
Q D + P P
Sbjct: 252 QQQDSEARVAPAGP 265
>gi|48717241 zinc finger protein 425 [Homo sapiens]
Length = 752
Score = 42.4 bits (98), Expect = 2e-04
Identities = 20/55 (36%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Query: 18 PEKIQKAFDDIAKYFSKEEWEKMKVSEKIVYVY-MKRKYEAMTKLGFKAILPSFM 71
P + FDD+A YFS++EWE ++ +K +Y MK YE + LG+ P +
Sbjct: 4 PASVTVTFDDVALYFSEQEWEILEKWQKQMYKQEMKTNYETLDSLGYAFSKPDLI 58
>gi|25777704 zinc finger 398 isoform a [Homo sapiens]
Length = 642
Score = 41.6 bits (96), Expect = 3e-04
Identities = 22/62 (35%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
Query: 11 PTVGAQIPEKIQKAFDDIAKYFSKEEWEKMKVSEKIVYV-YMKRKYEAMTKLGFKAILPS 69
P + IP K+ AFDD++ YFS EWEK++ +K +Y MK YE++ + + P
Sbjct: 132 PGIKGDIP-KVPVAFDDVSIYFSTPEWEKLEEWQKELYKNIMKGNYESLISMDYAINQPD 190
Query: 70 FM 71
+
Sbjct: 191 VL 192
>gi|118918411 zinc finger protein 777 [Homo sapiens]
Length = 831
Score = 40.4 bits (93), Expect = 7e-04
Identities = 31/119 (26%), Positives = 50/119 (42%), Gaps = 6/119 (5%)
Query: 11 PTVGAQIPEKIQKAFDDIAKYFSKEEWEKMKVSEKIVYV-YMKRKYEAMTKLGFKAILPS 69
P ++P K+ FDD+A +FS++EW + +K +Y M+ YE++ + + P
Sbjct: 274 PGSNGEVP-KVPVTFDDVAVHFSEQEWGNLSEWQKELYKNVMRGNYESLVSMDYAISKPD 332
Query: 70 FMRNKRVTDFQGNDFDNDPNRGNQVQRPQMTFGRLQGIFPKIMPKKPAEEGNVSKEVPE 128
M + D G P GI KI + +EG+ S E PE
Sbjct: 333 LMSQMERGERPTMQEQEDSEEGETPTDPSAAH---DGIVIKI-EVQTNDEGSESLETPE 387
>gi|21699074 zinc finger protein 688 isoform a [Homo sapiens]
Length = 276
Score = 40.4 bits (93), Expect = 7e-04
Identities = 31/111 (27%), Positives = 49/111 (44%), Gaps = 14/111 (12%)
Query: 24 AFDDIAKYFSKEEWEKMKVSEKIVY-VYMKRKYEAMTKLGFKAILPSFMRNKRVTDFQGN 82
+F D+A YFS EEW ++ +++ +Y M+ Y + LGF P+ + +
Sbjct: 27 SFADVAVYFSPEEWGCLRPAQRALYRDVMQETYGHLGALGFPGPKPALISWMEQESEAWS 86
Query: 83 DFDNDPNRGNQVQRPQMTFGRLQGIFPKIMPKKPAEEGNVSKEVPEASGPQ 133
DP +G RL G +P + EE +EVP A GP+
Sbjct: 87 PAAQDPEKGE----------RLGGARRGDVPNRKEEE---PEEVPRAKGPR 124
>gi|41152070 zinc finger protein 75 [Homo sapiens]
Length = 510
Score = 38.1 bits (87), Expect = 0.004
Identities = 20/50 (40%), Positives = 30/50 (60%), Gaps = 2/50 (4%)
Query: 17 IPEKIQK-AFDDIAKYFSKEEWEKMKVSEKIVY-VYMKRKYEAMTKLGFK 64
+PE + F+D+A YFS+EEW+ + EK +Y M+ YE + LG K
Sbjct: 228 LPESLSLLTFEDVAVYFSEEEWQLLNPLEKTLYNDVMQDIYETVISLGLK 277
>gi|210147475 zinc finger protein 92 homolog [Homo sapiens]
Length = 416
Score = 37.7 bits (86), Expect = 0.005
Identities = 16/50 (32%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Query: 20 KIQKAFDDIAKYFSKEEWEKMKVSEKIVYV-YMKRKYEAMTKLGFKAILP 68
K+ +F+D++ YF+K EW+ + + +K++Y M Y + LGF P
Sbjct: 11 KVPVSFEDVSVYFTKTEWKLLDLRQKVLYKRVMLENYSHLVSLGFSFSKP 60
>gi|170932473 zinc finger protein 786 [Homo sapiens]
Length = 782
Score = 37.7 bits (86), Expect = 0.005
Identities = 15/45 (33%), Positives = 29/45 (64%), Gaps = 1/45 (2%)
Query: 18 PEKIQKAFDDIAKYFSKEEWEKMKVSEKIVYVY-MKRKYEAMTKL 61
P ++ F+D+A YFS++EW+ ++ +K +Y + M+ YE + L
Sbjct: 4 PPRLPLTFEDVAIYFSEQEWQDLEAWQKELYKHVMRSNYETLVSL 48
>gi|149773449 zinc finger protein 862 [Homo sapiens]
Length = 1169
Score = 37.4 bits (85), Expect = 0.006
Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Query: 19 EKIQKAFDDIAKYFSKEEWEKMKVSEKIVY-VYMKRKYEAMTKLGFKAILPSFM 71
E++ F+D+A YF++EEW + +K +Y M+ YE + LG A P +
Sbjct: 329 EELPVVFEDVAVYFTREEWGMLDKRQKELYRDVMRMNYELLASLGPAAAKPDLI 382
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,291,952
Number of Sequences: 37866
Number of extensions: 330751
Number of successful extensions: 1553
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 179
Number of HSP's successfully gapped in prelim test: 94
Number of HSP's that attempted gapping in prelim test: 1350
Number of HSP's gapped (non-prelim): 296
length of query: 170
length of database: 18,247,518
effective HSP length: 95
effective length of query: 75
effective length of database: 14,650,248
effective search space: 1098768600
effective search space used: 1098768600
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.