BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|28558971 mediator complex subunit 23 isoform a [Homo
sapiens]
(1368 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|28558971 mediator complex subunit 23 isoform a [Homo sapiens] 2790 0.0
gi|28558969 mediator complex subunit 23 isoform b [Homo sapiens] 2766 0.0
gi|24415404 MDN1, midasin homolog [Homo sapiens] 37 0.13
gi|189083742 neutrophil cytosolic factor 2 [Homo sapiens] 35 0.38
gi|67189970 neutrophil cytosolic factor 2 [Homo sapiens] 35 0.38
gi|134254443 pecanex-like 2 [Homo sapiens] 34 0.84
gi|148806932 kyphoscoliosis peptidase [Homo sapiens] 33 1.4
gi|16306584 F-box and leucine-rich repeat protein 3 [Homo sapiens] 33 2.4
gi|20544172 bradykinin receptor B1 [Homo sapiens] 31 7.1
gi|195234779 hypothetical protein LOC60686 [Homo sapiens] 31 7.1
gi|195234776 hypothetical protein LOC60686 [Homo sapiens] 31 7.1
gi|195233774 hypothetical protein LOC60686 [Homo sapiens] 31 7.1
>gi|28558971 mediator complex subunit 23 isoform a [Homo sapiens]
Length = 1368
Score = 2790 bits (7232), Expect = 0.0
Identities = 1368/1368 (100%), Positives = 1368/1368 (100%)
Query: 1 METQLQSIFEEVVKTEVIEEAFPGMFMDTPEDEKTKLISCLGAFRQFWGGLSQESHEQCI 60
METQLQSIFEEVVKTEVIEEAFPGMFMDTPEDEKTKLISCLGAFRQFWGGLSQESHEQCI
Sbjct: 1 METQLQSIFEEVVKTEVIEEAFPGMFMDTPEDEKTKLISCLGAFRQFWGGLSQESHEQCI 60
Query: 61 QWIVKFIHGQHSPKRISFLYDCLAMAVETGLLPPRLVCESLINSDTLEWERTQLWALTFK 120
QWIVKFIHGQHSPKRISFLYDCLAMAVETGLLPPRLVCESLINSDTLEWERTQLWALTFK
Sbjct: 61 QWIVKFIHGQHSPKRISFLYDCLAMAVETGLLPPRLVCESLINSDTLEWERTQLWALTFK 120
Query: 121 LVRKIIGGVDYKGVRDLLKVILEKILTIPNTVSSAVVQQLLAAREVIAYILERNACLLPA 180
LVRKIIGGVDYKGVRDLLKVILEKILTIPNTVSSAVVQQLLAAREVIAYILERNACLLPA
Sbjct: 121 LVRKIIGGVDYKGVRDLLKVILEKILTIPNTVSSAVVQQLLAAREVIAYILERNACLLPA 180
Query: 181 YFAVTEIRKLYPEGKLPHWLLGNLVSDFVDTFRPTARINSICGRCSLLPVVNNSGAICNS 240
YFAVTEIRKLYPEGKLPHWLLGNLVSDFVDTFRPTARINSICGRCSLLPVVNNSGAICNS
Sbjct: 181 YFAVTEIRKLYPEGKLPHWLLGNLVSDFVDTFRPTARINSICGRCSLLPVVNNSGAICNS 240
Query: 241 WKLDPATLRFPLKGLLPYDKDLFEPQTALLRYVLEQPYSRDMVCNMLGLNKQHKQRCPVL 300
WKLDPATLRFPLKGLLPYDKDLFEPQTALLRYVLEQPYSRDMVCNMLGLNKQHKQRCPVL
Sbjct: 241 WKLDPATLRFPLKGLLPYDKDLFEPQTALLRYVLEQPYSRDMVCNMLGLNKQHKQRCPVL 300
Query: 301 EDQLVDLVVYAMERSETEEKFDDGGTSQLLWQHLSSQLIFFVLFQFASFPHMVLSLHQKL 360
EDQLVDLVVYAMERSETEEKFDDGGTSQLLWQHLSSQLIFFVLFQFASFPHMVLSLHQKL
Sbjct: 301 EDQLVDLVVYAMERSETEEKFDDGGTSQLLWQHLSSQLIFFVLFQFASFPHMVLSLHQKL 360
Query: 361 AGRGLIKGRDHLMWVLLQFISGSIQKNALADFLPVMKLFDLLYPEKEYIPVPDINKPQST 420
AGRGLIKGRDHLMWVLLQFISGSIQKNALADFLPVMKLFDLLYPEKEYIPVPDINKPQST
Sbjct: 361 AGRGLIKGRDHLMWVLLQFISGSIQKNALADFLPVMKLFDLLYPEKEYIPVPDINKPQST 420
Query: 421 HAFAMTCIWIHLNRKAQNDNSKLQIPIPHSLRLHHEFLQQSLRNKSLQMNDYKIALLCNA 480
HAFAMTCIWIHLNRKAQNDNSKLQIPIPHSLRLHHEFLQQSLRNKSLQMNDYKIALLCNA
Sbjct: 421 HAFAMTCIWIHLNRKAQNDNSKLQIPIPHSLRLHHEFLQQSLRNKSLQMNDYKIALLCNA 480
Query: 481 YSTNSECFTLPMGALVETIYGNGIMRIPLPGTNCMASGSITPLPMNLLDSLTVHAKMSLI 540
YSTNSECFTLPMGALVETIYGNGIMRIPLPGTNCMASGSITPLPMNLLDSLTVHAKMSLI
Sbjct: 481 YSTNSECFTLPMGALVETIYGNGIMRIPLPGTNCMASGSITPLPMNLLDSLTVHAKMSLI 540
Query: 541 HSIATRVIKLAHAKSSVALAPALVETYSRLLVYMEIESLGIKGFISQLLPTVFKSHAWGI 600
HSIATRVIKLAHAKSSVALAPALVETYSRLLVYMEIESLGIKGFISQLLPTVFKSHAWGI
Sbjct: 541 HSIATRVIKLAHAKSSVALAPALVETYSRLLVYMEIESLGIKGFISQLLPTVFKSHAWGI 600
Query: 601 LHTLLEMFSYRMHHIQPHYRVQLLSHLHTLAAVAQTNQNQLHLCVESTALRLITALGSSE 660
LHTLLEMFSYRMHHIQPHYRVQLLSHLHTLAAVAQTNQNQLHLCVESTALRLITALGSSE
Sbjct: 601 LHTLLEMFSYRMHHIQPHYRVQLLSHLHTLAAVAQTNQNQLHLCVESTALRLITALGSSE 660
Query: 661 VQPQFTRFLSDPKTVLSAESEELNRALILTLARATHVTDFFTGSDSIQGTWCKDILQTIM 720
VQPQFTRFLSDPKTVLSAESEELNRALILTLARATHVTDFFTGSDSIQGTWCKDILQTIM
Sbjct: 661 VQPQFTRFLSDPKTVLSAESEELNRALILTLARATHVTDFFTGSDSIQGTWCKDILQTIM 720
Query: 721 SFTPHNWASHTLSCFPGPLQAFFKQNNVPQESRFNLKKNVEEEYRKWKSMSNENDIITHF 780
SFTPHNWASHTLSCFPGPLQAFFKQNNVPQESRFNLKKNVEEEYRKWKSMSNENDIITHF
Sbjct: 721 SFTPHNWASHTLSCFPGPLQAFFKQNNVPQESRFNLKKNVEEEYRKWKSMSNENDIITHF 780
Query: 781 SMQGSPPLFLCLLWKMLLETDHINQIGYRVLERIGARALVAHVRTFADFLVYEFSTSAGG 840
SMQGSPPLFLCLLWKMLLETDHINQIGYRVLERIGARALVAHVRTFADFLVYEFSTSAGG
Sbjct: 781 SMQGSPPLFLCLLWKMLLETDHINQIGYRVLERIGARALVAHVRTFADFLVYEFSTSAGG 840
Query: 841 QQLNKCIEILNDMVWKYNIVTLDRLILCLAMRSHEGNEAQVCYFIIQLLLLKPNDFRNRV 900
QQLNKCIEILNDMVWKYNIVTLDRLILCLAMRSHEGNEAQVCYFIIQLLLLKPNDFRNRV
Sbjct: 841 QQLNKCIEILNDMVWKYNIVTLDRLILCLAMRSHEGNEAQVCYFIIQLLLLKPNDFRNRV 900
Query: 901 SDFVKENSPEHWLQNDWHTKHMNYHKKYPEKLYFEGLAEQVDPPVQIQSPYLPIYFGNVC 960
SDFVKENSPEHWLQNDWHTKHMNYHKKYPEKLYFEGLAEQVDPPVQIQSPYLPIYFGNVC
Sbjct: 901 SDFVKENSPEHWLQNDWHTKHMNYHKKYPEKLYFEGLAEQVDPPVQIQSPYLPIYFGNVC 960
Query: 961 LRFLPVFDIVIHRFLELLPVSKSLETLLDHLGGLYKFHDRPVTYLYNTLHYYEMHLRDRA 1020
LRFLPVFDIVIHRFLELLPVSKSLETLLDHLGGLYKFHDRPVTYLYNTLHYYEMHLRDRA
Sbjct: 961 LRFLPVFDIVIHRFLELLPVSKSLETLLDHLGGLYKFHDRPVTYLYNTLHYYEMHLRDRA 1020
Query: 1021 FLKRKLVHAIIGSLKDNRPQGWCLSDTYLKCAMNAREENPWVPDDTYYCRLIGRLVDTMA 1080
FLKRKLVHAIIGSLKDNRPQGWCLSDTYLKCAMNAREENPWVPDDTYYCRLIGRLVDTMA
Sbjct: 1021 FLKRKLVHAIIGSLKDNRPQGWCLSDTYLKCAMNAREENPWVPDDTYYCRLIGRLVDTMA 1080
Query: 1081 GKSPGPFPNCDWRFNEFPNPAAHALHVTCVELMALAVSGKEVGNALLNVVLKSQPLVPRE 1140
GKSPGPFPNCDWRFNEFPNPAAHALHVTCVELMALAVSGKEVGNALLNVVLKSQPLVPRE
Sbjct: 1081 GKSPGPFPNCDWRFNEFPNPAAHALHVTCVELMALAVSGKEVGNALLNVVLKSQPLVPRE 1140
Query: 1141 NITAWMNAIGLIITALPEPYWIVLHDRIVSVISSPSLTSETEWVGYPFRLFDFTACHQSY 1200
NITAWMNAIGLIITALPEPYWIVLHDRIVSVISSPSLTSETEWVGYPFRLFDFTACHQSY
Sbjct: 1141 NITAWMNAIGLIITALPEPYWIVLHDRIVSVISSPSLTSETEWVGYPFRLFDFTACHQSY 1200
Query: 1201 SEMSCSYTLALAHAVWHHSSIGQLSLIPKFLTEVLLPIVKTEFQLLYVYHLVGPFLQRFQ 1260
SEMSCSYTLALAHAVWHHSSIGQLSLIPKFLTEVLLPIVKTEFQLLYVYHLVGPFLQRFQ
Sbjct: 1201 SEMSCSYTLALAHAVWHHSSIGQLSLIPKFLTEVLLPIVKTEFQLLYVYHLVGPFLQRFQ 1260
Query: 1261 QERTRCMIEIGVAFYDMLLNVDQCSTHLNYMDPICDFLYHMKYMFTGDSVKEQVEKIICN 1320
QERTRCMIEIGVAFYDMLLNVDQCSTHLNYMDPICDFLYHMKYMFTGDSVKEQVEKIICN
Sbjct: 1261 QERTRCMIEIGVAFYDMLLNVDQCSTHLNYMDPICDFLYHMKYMFTGDSVKEQVEKIICN 1320
Query: 1321 LKPALKLRLRFITHISKMEPAAVPPQAMNSGSPAPQSNQVPVSLPVTQ 1368
LKPALKLRLRFITHISKMEPAAVPPQAMNSGSPAPQSNQVPVSLPVTQ
Sbjct: 1321 LKPALKLRLRFITHISKMEPAAVPPQAMNSGSPAPQSNQVPVSLPVTQ 1368
>gi|28558969 mediator complex subunit 23 isoform b [Homo sapiens]
Length = 1365
Score = 2766 bits (7171), Expect = 0.0
Identities = 1359/1365 (99%), Positives = 1359/1365 (99%), Gaps = 6/1365 (0%)
Query: 1 METQLQSIFEEVVKTEVIEEAFPGMFMDTPEDEKTKLISCLGAFRQFWGGLSQESHEQCI 60
METQLQSIFEEVVKTEVIEEAFPGMFMDTPEDEKTKLISCLGAFRQFWGGLSQESHEQCI
Sbjct: 1 METQLQSIFEEVVKTEVIEEAFPGMFMDTPEDEKTKLISCLGAFRQFWGGLSQESHEQCI 60
Query: 61 QWIVKFIHGQHSPKRISFLYDCLAMAVETGLLPPRLVCESLINSDTLEWERTQLWALTFK 120
QWIVKFIHGQHSPKRISFLYDCLAMAVETGLLPPRLVCESLINSDTLEWERTQLWALTFK
Sbjct: 61 QWIVKFIHGQHSPKRISFLYDCLAMAVETGLLPPRLVCESLINSDTLEWERTQLWALTFK 120
Query: 121 LVRKIIGGVDYKGVRDLLKVILEKILTIPNTVSSAVVQQLLAAREVIAYILERNACLLPA 180
LVRKIIGGVDYKGVRDLLKVILEKILTIPNTVSSAVVQQLLAAREVIAYILERNACLLPA
Sbjct: 121 LVRKIIGGVDYKGVRDLLKVILEKILTIPNTVSSAVVQQLLAAREVIAYILERNACLLPA 180
Query: 181 YFAVTEIRKLYPEGKLPHWLLGNLVSDFVDTFRPTARINSICGRCSLLPVVNNSGAICNS 240
YFAVTEIRKLYPEGKLPHWLLGNLVSDFVDTFRPTARINSICGRCSLLPVVNNSGAICNS
Sbjct: 181 YFAVTEIRKLYPEGKLPHWLLGNLVSDFVDTFRPTARINSICGRCSLLPVVNNSGAICNS 240
Query: 241 WKLDPATLRFPLKGLLPYDKDLFEPQTALLRYVLEQPYSRDMVCNMLGLNKQ------HK 294
WKLDPATLRFPLKGLLPYDKDLFEPQTALLRYVLEQPYSRDMVCNMLGLNKQ HK
Sbjct: 241 WKLDPATLRFPLKGLLPYDKDLFEPQTALLRYVLEQPYSRDMVCNMLGLNKQTLNIAQHK 300
Query: 295 QRCPVLEDQLVDLVVYAMERSETEEKFDDGGTSQLLWQHLSSQLIFFVLFQFASFPHMVL 354
QRCPVLEDQLVDLVVYAMERSETEEKFDDGGTSQLLWQHLSSQLIFFVLFQFASFPHMVL
Sbjct: 301 QRCPVLEDQLVDLVVYAMERSETEEKFDDGGTSQLLWQHLSSQLIFFVLFQFASFPHMVL 360
Query: 355 SLHQKLAGRGLIKGRDHLMWVLLQFISGSIQKNALADFLPVMKLFDLLYPEKEYIPVPDI 414
SLHQKLAGRGLIKGRDHLMWVLLQFISGSIQKNALADFLPVMKLFDLLYPEKEYIPVPDI
Sbjct: 361 SLHQKLAGRGLIKGRDHLMWVLLQFISGSIQKNALADFLPVMKLFDLLYPEKEYIPVPDI 420
Query: 415 NKPQSTHAFAMTCIWIHLNRKAQNDNSKLQIPIPHSLRLHHEFLQQSLRNKSLQMNDYKI 474
NKPQSTHAFAMTCIWIHLNRKAQNDNSKLQIPIPHSLRLHHEFLQQSLRNKSLQMNDYKI
Sbjct: 421 NKPQSTHAFAMTCIWIHLNRKAQNDNSKLQIPIPHSLRLHHEFLQQSLRNKSLQMNDYKI 480
Query: 475 ALLCNAYSTNSECFTLPMGALVETIYGNGIMRIPLPGTNCMASGSITPLPMNLLDSLTVH 534
ALLCNAYSTNSECFTLPMGALVETIYGNGIMRIPLPGTNCMASGSITPLPMNLLDSLTVH
Sbjct: 481 ALLCNAYSTNSECFTLPMGALVETIYGNGIMRIPLPGTNCMASGSITPLPMNLLDSLTVH 540
Query: 535 AKMSLIHSIATRVIKLAHAKSSVALAPALVETYSRLLVYMEIESLGIKGFISQLLPTVFK 594
AKMSLIHSIATRVIKLAHAKSSVALAPALVETYSRLLVYMEIESLGIKGFISQLLPTVFK
Sbjct: 541 AKMSLIHSIATRVIKLAHAKSSVALAPALVETYSRLLVYMEIESLGIKGFISQLLPTVFK 600
Query: 595 SHAWGILHTLLEMFSYRMHHIQPHYRVQLLSHLHTLAAVAQTNQNQLHLCVESTALRLIT 654
SHAWGILHTLLEMFSYRMHHIQPHYRVQLLSHLHTLAAVAQTNQNQLHLCVESTALRLIT
Sbjct: 601 SHAWGILHTLLEMFSYRMHHIQPHYRVQLLSHLHTLAAVAQTNQNQLHLCVESTALRLIT 660
Query: 655 ALGSSEVQPQFTRFLSDPKTVLSAESEELNRALILTLARATHVTDFFTGSDSIQGTWCKD 714
ALGSSEVQPQFTRFLSDPKTVLSAESEELNRALILTLARATHVTDFFTGSDSIQGTWCKD
Sbjct: 661 ALGSSEVQPQFTRFLSDPKTVLSAESEELNRALILTLARATHVTDFFTGSDSIQGTWCKD 720
Query: 715 ILQTIMSFTPHNWASHTLSCFPGPLQAFFKQNNVPQESRFNLKKNVEEEYRKWKSMSNEN 774
ILQTIMSFTPHNWASHTLSCFPGPLQAFFKQNNVPQESRFNLKKNVEEEYRKWKSMSNEN
Sbjct: 721 ILQTIMSFTPHNWASHTLSCFPGPLQAFFKQNNVPQESRFNLKKNVEEEYRKWKSMSNEN 780
Query: 775 DIITHFSMQGSPPLFLCLLWKMLLETDHINQIGYRVLERIGARALVAHVRTFADFLVYEF 834
DIITHFSMQGSPPLFLCLLWKMLLETDHINQIGYRVLERIGARALVAHVRTFADFLVYEF
Sbjct: 781 DIITHFSMQGSPPLFLCLLWKMLLETDHINQIGYRVLERIGARALVAHVRTFADFLVYEF 840
Query: 835 STSAGGQQLNKCIEILNDMVWKYNIVTLDRLILCLAMRSHEGNEAQVCYFIIQLLLLKPN 894
STSAGGQQLNKCIEILNDMVWKYNIVTLDRLILCLAMRSHEGNEAQVCYFIIQLLLLKPN
Sbjct: 841 STSAGGQQLNKCIEILNDMVWKYNIVTLDRLILCLAMRSHEGNEAQVCYFIIQLLLLKPN 900
Query: 895 DFRNRVSDFVKENSPEHWLQNDWHTKHMNYHKKYPEKLYFEGLAEQVDPPVQIQSPYLPI 954
DFRNRVSDFVKENSPEHWLQNDWHTKHMNYHKKYPEKLYFEGLAEQVDPPVQIQSPYLPI
Sbjct: 901 DFRNRVSDFVKENSPEHWLQNDWHTKHMNYHKKYPEKLYFEGLAEQVDPPVQIQSPYLPI 960
Query: 955 YFGNVCLRFLPVFDIVIHRFLELLPVSKSLETLLDHLGGLYKFHDRPVTYLYNTLHYYEM 1014
YFGNVCLRFLPVFDIVIHRFLELLPVSKSLETLLDHLGGLYKFHDRPVTYLYNTLHYYEM
Sbjct: 961 YFGNVCLRFLPVFDIVIHRFLELLPVSKSLETLLDHLGGLYKFHDRPVTYLYNTLHYYEM 1020
Query: 1015 HLRDRAFLKRKLVHAIIGSLKDNRPQGWCLSDTYLKCAMNAREENPWVPDDTYYCRLIGR 1074
HLRDRAFLKRKLVHAIIGSLKDNRPQGWCLSDTYLKCAMNAREENPWVPDDTYYCRLIGR
Sbjct: 1021 HLRDRAFLKRKLVHAIIGSLKDNRPQGWCLSDTYLKCAMNAREENPWVPDDTYYCRLIGR 1080
Query: 1075 LVDTMAGKSPGPFPNCDWRFNEFPNPAAHALHVTCVELMALAVSGKEVGNALLNVVLKSQ 1134
LVDTMAGKSPGPFPNCDWRFNEFPNPAAHALHVTCVELMALAVSGKEVGNALLNVVLKSQ
Sbjct: 1081 LVDTMAGKSPGPFPNCDWRFNEFPNPAAHALHVTCVELMALAVSGKEVGNALLNVVLKSQ 1140
Query: 1135 PLVPRENITAWMNAIGLIITALPEPYWIVLHDRIVSVISSPSLTSETEWVGYPFRLFDFT 1194
PLVPRENITAWMNAIGLIITALPEPYWIVLHDRIVSVISSPSLTSETEWVGYPFRLFDFT
Sbjct: 1141 PLVPRENITAWMNAIGLIITALPEPYWIVLHDRIVSVISSPSLTSETEWVGYPFRLFDFT 1200
Query: 1195 ACHQSYSEMSCSYTLALAHAVWHHSSIGQLSLIPKFLTEVLLPIVKTEFQLLYVYHLVGP 1254
ACHQSYSEMSCSYTLALAHAVWHHSSIGQLSLIPKFLTEVLLPIVKTEFQLLYVYHLVGP
Sbjct: 1201 ACHQSYSEMSCSYTLALAHAVWHHSSIGQLSLIPKFLTEVLLPIVKTEFQLLYVYHLVGP 1260
Query: 1255 FLQRFQQERTRCMIEIGVAFYDMLLNVDQCSTHLNYMDPICDFLYHMKYMFTGDSVKEQV 1314
FLQRFQQERTRCMIEIGVAFYDMLLNVDQCSTHLNYMDPICDFLYHMKYMFTGDSVKEQV
Sbjct: 1261 FLQRFQQERTRCMIEIGVAFYDMLLNVDQCSTHLNYMDPICDFLYHMKYMFTGDSVKEQV 1320
Query: 1315 EKIICNLKPALKLRLRFITHISKMEPAAVPPQAMNSGSPAPQSNQ 1359
EKIICNLKPALKLRLRFITHISKMEPAAVPPQAMNSGSPAPQSNQ
Sbjct: 1321 EKIICNLKPALKLRLRFITHISKMEPAAVPPQAMNSGSPAPQSNQ 1365
>gi|24415404 MDN1, midasin homolog [Homo sapiens]
Length = 5596
Score = 37.0 bits (84), Expect = 0.13
Identities = 44/177 (24%), Positives = 77/177 (43%), Gaps = 19/177 (10%)
Query: 525 MNLLDSLTVH-----AKMSLIHSIATRVIKLAHAKSSVALAPALVETYSRLLVYMEIESL 579
M+ LD+LT H A + + + V ++ H +S+A APA+ + +RLL + I+
Sbjct: 3300 MDRLDNLTCHLLKKQAFRPQLPAYESLVQEIHHYVTSIAKAPAVQDLLTRLLQALHID-- 3357
Query: 580 GIKGFISQLLPTVFKSHA-WGILH-----TLLEMFSYRMHHIQPHYRVQLLSHLHTLAAV 633
G + +Q+ ++ K A W H L E +++ + P + +L H + V
Sbjct: 3358 GPRS--AQVAQSLLKEEASWQQSHHQFRKRLSEEYTFYPDAVSP-LQASILQLQHGMRLV 3414
Query: 634 AQTNQNQLH---LCVESTALRLITALGSSEVQPQFTRFLSDPKTVLSAESEELNRAL 687
A LH + + L V P F + + T+ S +SEE+ R L
Sbjct: 3415 ASELHTSLHSSMVGADRLGTLATALLAFPSVGPTFPTYYAHADTLCSVKSEEVLRGL 3471
>gi|189083742 neutrophil cytosolic factor 2 [Homo sapiens]
Length = 526
Score = 35.4 bits (80), Expect = 0.38
Identities = 25/94 (26%), Positives = 46/94 (48%), Gaps = 4/94 (4%)
Query: 365 LIKGRDHLMWVLLQFISGSIQKNALADFLPV-MKLFDLLYPEKEYIPVPDINKPQSTHAF 423
L KG D+ V+ G + N L PV +++ P++E P DI P S+ A
Sbjct: 270 LKKGNDNWATVMFNGQKGLVPCNYLE---PVELRIHPQQQPQEESSPQSDIPAPPSSKAP 326
Query: 424 AMTCIWIHLNRKAQNDNSKLQIPIPHSLRLHHEF 457
+ +K + KL +P+P++L++H+++
Sbjct: 327 GRPQLSPGQKQKEEPKEVKLSVPMPYTLKVHYKY 360
>gi|67189970 neutrophil cytosolic factor 2 [Homo sapiens]
Length = 526
Score = 35.4 bits (80), Expect = 0.38
Identities = 25/94 (26%), Positives = 46/94 (48%), Gaps = 4/94 (4%)
Query: 365 LIKGRDHLMWVLLQFISGSIQKNALADFLPV-MKLFDLLYPEKEYIPVPDINKPQSTHAF 423
L KG D+ V+ G + N L PV +++ P++E P DI P S+ A
Sbjct: 270 LKKGNDNWATVMFNGQKGLVPCNYLE---PVELRIHPQQQPQEESSPQSDIPAPPSSKAP 326
Query: 424 AMTCIWIHLNRKAQNDNSKLQIPIPHSLRLHHEF 457
+ +K + KL +P+P++L++H+++
Sbjct: 327 GRPQLSPGQKQKEEPKEVKLSVPMPYTLKVHYKY 360
>gi|134254443 pecanex-like 2 [Homo sapiens]
Length = 2137
Score = 34.3 bits (77), Expect = 0.84
Identities = 27/104 (25%), Positives = 49/104 (47%), Gaps = 8/104 (7%)
Query: 515 MASGSITPLPMNLLDSLTVHAKMSLIHSIATRVIKLAHAKSSVALAPALVETYSRLLVYM 574
+A + PLP + DS+T K LI V+ A + S+V L+ + + ++++
Sbjct: 1075 LAESAADPLPKKMKDSVTDVLKWDLIVCAVVAVLSFAVSASTVFLS---LRPFLSIVLF- 1130
Query: 575 EIESLGIKGFISQ-LLPTVFKSHAW-GILHTLLEMFSYRMHHIQ 616
G GF++ +LP + K H W I H +L+ Y ++
Sbjct: 1131 --ALAGAVGFVTHYVLPQLRKHHPWMWISHPILKNKEYHQREVR 1172
>gi|148806932 kyphoscoliosis peptidase [Homo sapiens]
Length = 661
Score = 33.5 bits (75), Expect = 1.4
Identities = 35/150 (23%), Positives = 59/150 (39%), Gaps = 7/150 (4%)
Query: 941 VDPPVQIQSPYLPIYFGNVCLRFLPVF-DIVIHRFLELLPVSKSLETLLDHLGGLYKFHD 999
V P ++ P P +F P D +IH +S S+E ++ L L+ D
Sbjct: 442 VQLPAELHQPVGPSWFSEQMGIMKPSHPDPIIHTSDGRCSISFSVEEGINVLASLHG-DD 500
Query: 1000 RPVTYLYNTLHYYEMHLRDRAFLKRKLVHAIIGSL-----KDNRPQGWCLSDTYLKCAMN 1054
P+T + +++H + LK +L HA +L K P + YL C N
Sbjct: 501 GPITEETQRRYIFQLHREKQTELKVQLPHAGKFALKIFVKKRQEPGNYIFVFNYLVCCAN 560
Query: 1055 AREENPWVPDDTYYCRLIGRLVDTMAGKSP 1084
+ P P+ L++ ++G P
Sbjct: 561 TKVNWPMFPESFGNWGQDNELLEPLSGVLP 590
>gi|16306584 F-box and leucine-rich repeat protein 3 [Homo sapiens]
Length = 428
Score = 32.7 bits (73), Expect = 2.4
Identities = 35/136 (25%), Positives = 59/136 (43%), Gaps = 10/136 (7%)
Query: 866 ILCLAMRSHEGNEAQVCYFII--QLLLLKPNDFRNRVS----DFVKENSPE---HWLQND 916
ILC+A + H E + Y ++ +LLL ++ R+ D V EN + H +Q
Sbjct: 216 ILCVADQCHGLRELALNYHLLSDELLLALSSEKHVRLEHLRIDVVSENPGQTHFHTIQKS 275
Query: 917 WHTKHMNYHKKYPEKLYFEGLAEQVDPPVQIQSPYLPIYFG-NVCLRFLPVFDIVIHRFL 975
+ + K +YF E+ DP + + P +YFG +V L + R +
Sbjct: 276 SWDAFIRHSPKVNLVMYFFLYEEEFDPFFRYEIPATHLYFGRSVSKDVLGRVGMTCPRLV 335
Query: 976 ELLPVSKSLETLLDHL 991
EL+ + L L + L
Sbjct: 336 ELVVCANGLRPLDEEL 351
>gi|20544172 bradykinin receptor B1 [Homo sapiens]
Length = 353
Score = 31.2 bits (69), Expect = 7.1
Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 8/58 (13%)
Query: 1209 LALAHAVWHHSSIGQLSLIPKFLTEVLLPIVKTEFQLLYVYHLVGPFLQRFQQERTRC 1266
L L H WH + I +L+++ LLP+ F + YH++ R + RTRC
Sbjct: 191 LLLPHEAWHFARIVELNIL-----GFLLPLAAIVF---FNYHILASLRTREEVSRTRC 240
>gi|195234779 hypothetical protein LOC60686 [Homo sapiens]
Length = 538
Score = 31.2 bits (69), Expect = 7.1
Identities = 23/100 (23%), Positives = 46/100 (46%), Gaps = 18/100 (18%)
Query: 696 HVTDF--FTGSDSIQGTWCKDILQTIMS-------FTPHNWASHTLSCFPGPLQAFFKQN 746
H+T+ F GS+SI+ +W +++ ++ +PHN+ L G A+F
Sbjct: 315 HITNDKRFNGSESIKSSWNISVVKFLLEKLKQELVTSPHNYTDKELK---GACVAYFLTK 371
Query: 747 NVPQESRFNLKKNVEEE------YRKWKSMSNENDIITHF 780
+ N K ++E+ R+++ +N + I+ HF
Sbjct: 372 RREYRNSLNPFKGLKEKEEKKLRSRRYRLFANRSSIMRHF 411
>gi|195234776 hypothetical protein LOC60686 [Homo sapiens]
Length = 538
Score = 31.2 bits (69), Expect = 7.1
Identities = 23/100 (23%), Positives = 46/100 (46%), Gaps = 18/100 (18%)
Query: 696 HVTDF--FTGSDSIQGTWCKDILQTIMS-------FTPHNWASHTLSCFPGPLQAFFKQN 746
H+T+ F GS+SI+ +W +++ ++ +PHN+ L G A+F
Sbjct: 315 HITNDKRFNGSESIKSSWNISVVKFLLEKLKQELVTSPHNYTDKELK---GACVAYFLTK 371
Query: 747 NVPQESRFNLKKNVEEE------YRKWKSMSNENDIITHF 780
+ N K ++E+ R+++ +N + I+ HF
Sbjct: 372 RREYRNSLNPFKGLKEKEEKKLRSRRYRLFANRSSIMRHF 411
>gi|195233774 hypothetical protein LOC60686 [Homo sapiens]
Length = 538
Score = 31.2 bits (69), Expect = 7.1
Identities = 23/100 (23%), Positives = 46/100 (46%), Gaps = 18/100 (18%)
Query: 696 HVTDF--FTGSDSIQGTWCKDILQTIMS-------FTPHNWASHTLSCFPGPLQAFFKQN 746
H+T+ F GS+SI+ +W +++ ++ +PHN+ L G A+F
Sbjct: 315 HITNDKRFNGSESIKSSWNISVVKFLLEKLKQELVTSPHNYTDKELK---GACVAYFLTK 371
Query: 747 NVPQESRFNLKKNVEEE------YRKWKSMSNENDIITHF 780
+ N K ++E+ R+++ +N + I+ HF
Sbjct: 372 RREYRNSLNPFKGLKEKEEKKLRSRRYRLFANRSSIMRHF 411
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.324 0.138 0.427
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 53,434,469
Number of Sequences: 37866
Number of extensions: 2455892
Number of successful extensions: 6769
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 6760
Number of HSP's gapped (non-prelim): 16
length of query: 1368
length of database: 18,247,518
effective HSP length: 115
effective length of query: 1253
effective length of database: 13,892,928
effective search space: 17407838784
effective search space used: 17407838784
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 68 (30.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.