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Search of human proteins with 241896875
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|241896875 cytochrome b, ascorbate dependent 3 isoform 1
[Homo sapiens]
(259 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|241896875 cytochrome b, ascorbate dependent 3 isoform 1 [Homo... 536 e-153
gi|241896889 cytochrome b, ascorbate dependent 3 isoform 2 [Homo... 502 e-142
gi|241896864 cytochrome b, ascorbate dependent 3 isoform 2 [Homo... 502 e-142
gi|188536036 cytochrome b reductase 1 isoform 1 [Homo sapiens] 206 2e-53
gi|63054832 cytochrome b-561 [Homo sapiens] 174 9e-44
gi|63054830 cytochrome b-561 [Homo sapiens] 174 9e-44
gi|63054828 cytochrome b-561 [Homo sapiens] 174 9e-44
gi|188497708 cytochrome b reductase 1 isoform 2 [Homo sapiens] 58 9e-09
gi|32698982 cytochrome b-561 domain containing 1 isoform 2 [Homo... 45 6e-05
gi|5901884 cytochrome b-561 domain containing 2 [Homo sapiens] 40 0.002
gi|197304729 cytochrome b-561 domain containing 1 isoform 3 [Hom... 37 0.022
gi|197304721 cytochrome b-561 domain containing 1 isoform 1 [Hom... 37 0.022
gi|157671951 solute carrier family 4, anion exchanger, member 3 ... 31 0.94
gi|157671953 solute carrier family 4, anion exchanger, member 3 ... 31 0.94
gi|153266866 gamma-aminobutyric acid (GABA) receptor, rho 2 prec... 30 1.6
gi|148746216 lipocalin-interacting membrane receptor [Homo sapiens] 29 3.6
gi|194097386 gamma-aminobutyric acid (GABA) receptor, rho 1 [Hom... 29 3.6
gi|49170034 integrin, alpha 8 [Homo sapiens] 29 3.6
gi|6005701 ATP-binding cassette, sub-family A member 8 [Homo sap... 29 4.7
gi|4505561 pyrimidinergic receptor P2Y4 [Homo sapiens] 29 4.7
gi|52353953 olfactory receptor, family 2, subfamily AG, member 2... 28 8.0
>gi|241896875 cytochrome b, ascorbate dependent 3 isoform 1 [Homo
sapiens]
Length = 259
Score = 536 bits (1381), Expect = e-153
Identities = 259/259 (100%), Positives = 259/259 (100%)
Query: 1 MGKNFSDSFLSRECVIRMVSGRFYLSCLLLGSLGSMCILFTIYWMQYWRGGFAWNGSIYM 60
MGKNFSDSFLSRECVIRMVSGRFYLSCLLLGSLGSMCILFTIYWMQYWRGGFAWNGSIYM
Sbjct: 1 MGKNFSDSFLSRECVIRMVSGRFYLSCLLLGSLGSMCILFTIYWMQYWRGGFAWNGSIYM 60
Query: 61 FNWHPVLMVAGMVVFYGGASLVYRLPQSWVGPKLPWKLLHAALHLMAFVLTVVGLVAVFT 120
FNWHPVLMVAGMVVFYGGASLVYRLPQSWVGPKLPWKLLHAALHLMAFVLTVVGLVAVFT
Sbjct: 61 FNWHPVLMVAGMVVFYGGASLVYRLPQSWVGPKLPWKLLHAALHLMAFVLTVVGLVAVFT 120
Query: 121 FHNHGRTANLYSLHSWLGITTVFLFACQWFLGFAVFLLPWASMWLRSLLKPIHVFFGAAI 180
FHNHGRTANLYSLHSWLGITTVFLFACQWFLGFAVFLLPWASMWLRSLLKPIHVFFGAAI
Sbjct: 121 FHNHGRTANLYSLHSWLGITTVFLFACQWFLGFAVFLLPWASMWLRSLLKPIHVFFGAAI 180
Query: 181 LSLSIASVISGINEKLFFSLKNTTRPYHSLPSEAVFANSTGMLVVAFGLLVLYILLASSW 240
LSLSIASVISGINEKLFFSLKNTTRPYHSLPSEAVFANSTGMLVVAFGLLVLYILLASSW
Sbjct: 181 LSLSIASVISGINEKLFFSLKNTTRPYHSLPSEAVFANSTGMLVVAFGLLVLYILLASSW 240
Query: 241 KRPEPGILTDRQPLLHDGE 259
KRPEPGILTDRQPLLHDGE
Sbjct: 241 KRPEPGILTDRQPLLHDGE 259
>gi|241896889 cytochrome b, ascorbate dependent 3 isoform 2 [Homo
sapiens]
Length = 242
Score = 502 bits (1293), Expect = e-142
Identities = 242/242 (100%), Positives = 242/242 (100%)
Query: 18 MVSGRFYLSCLLLGSLGSMCILFTIYWMQYWRGGFAWNGSIYMFNWHPVLMVAGMVVFYG 77
MVSGRFYLSCLLLGSLGSMCILFTIYWMQYWRGGFAWNGSIYMFNWHPVLMVAGMVVFYG
Sbjct: 1 MVSGRFYLSCLLLGSLGSMCILFTIYWMQYWRGGFAWNGSIYMFNWHPVLMVAGMVVFYG 60
Query: 78 GASLVYRLPQSWVGPKLPWKLLHAALHLMAFVLTVVGLVAVFTFHNHGRTANLYSLHSWL 137
GASLVYRLPQSWVGPKLPWKLLHAALHLMAFVLTVVGLVAVFTFHNHGRTANLYSLHSWL
Sbjct: 61 GASLVYRLPQSWVGPKLPWKLLHAALHLMAFVLTVVGLVAVFTFHNHGRTANLYSLHSWL 120
Query: 138 GITTVFLFACQWFLGFAVFLLPWASMWLRSLLKPIHVFFGAAILSLSIASVISGINEKLF 197
GITTVFLFACQWFLGFAVFLLPWASMWLRSLLKPIHVFFGAAILSLSIASVISGINEKLF
Sbjct: 121 GITTVFLFACQWFLGFAVFLLPWASMWLRSLLKPIHVFFGAAILSLSIASVISGINEKLF 180
Query: 198 FSLKNTTRPYHSLPSEAVFANSTGMLVVAFGLLVLYILLASSWKRPEPGILTDRQPLLHD 257
FSLKNTTRPYHSLPSEAVFANSTGMLVVAFGLLVLYILLASSWKRPEPGILTDRQPLLHD
Sbjct: 181 FSLKNTTRPYHSLPSEAVFANSTGMLVVAFGLLVLYILLASSWKRPEPGILTDRQPLLHD 240
Query: 258 GE 259
GE
Sbjct: 241 GE 242
>gi|241896864 cytochrome b, ascorbate dependent 3 isoform 2 [Homo
sapiens]
Length = 242
Score = 502 bits (1293), Expect = e-142
Identities = 242/242 (100%), Positives = 242/242 (100%)
Query: 18 MVSGRFYLSCLLLGSLGSMCILFTIYWMQYWRGGFAWNGSIYMFNWHPVLMVAGMVVFYG 77
MVSGRFYLSCLLLGSLGSMCILFTIYWMQYWRGGFAWNGSIYMFNWHPVLMVAGMVVFYG
Sbjct: 1 MVSGRFYLSCLLLGSLGSMCILFTIYWMQYWRGGFAWNGSIYMFNWHPVLMVAGMVVFYG 60
Query: 78 GASLVYRLPQSWVGPKLPWKLLHAALHLMAFVLTVVGLVAVFTFHNHGRTANLYSLHSWL 137
GASLVYRLPQSWVGPKLPWKLLHAALHLMAFVLTVVGLVAVFTFHNHGRTANLYSLHSWL
Sbjct: 61 GASLVYRLPQSWVGPKLPWKLLHAALHLMAFVLTVVGLVAVFTFHNHGRTANLYSLHSWL 120
Query: 138 GITTVFLFACQWFLGFAVFLLPWASMWLRSLLKPIHVFFGAAILSLSIASVISGINEKLF 197
GITTVFLFACQWFLGFAVFLLPWASMWLRSLLKPIHVFFGAAILSLSIASVISGINEKLF
Sbjct: 121 GITTVFLFACQWFLGFAVFLLPWASMWLRSLLKPIHVFFGAAILSLSIASVISGINEKLF 180
Query: 198 FSLKNTTRPYHSLPSEAVFANSTGMLVVAFGLLVLYILLASSWKRPEPGILTDRQPLLHD 257
FSLKNTTRPYHSLPSEAVFANSTGMLVVAFGLLVLYILLASSWKRPEPGILTDRQPLLHD
Sbjct: 181 FSLKNTTRPYHSLPSEAVFANSTGMLVVAFGLLVLYILLASSWKRPEPGILTDRQPLLHD 240
Query: 258 GE 259
GE
Sbjct: 241 GE 242
>gi|188536036 cytochrome b reductase 1 isoform 1 [Homo sapiens]
Length = 286
Score = 206 bits (523), Expect = 2e-53
Identities = 99/219 (45%), Positives = 139/219 (63%), Gaps = 5/219 (2%)
Query: 29 LLGS---LGSMCILFTIYWMQYWRGGFAWNGSIYMFNWHPVLMVAGMVVFYGGASLVYRL 85
LLGS +G + ++F + W+ ++R G W+GS FNWHPVLMV G V G A +VYRL
Sbjct: 12 LLGSALLVGFLSVIFALVWVLHYREGLGWDGSALEFNWHPVLMVTGFVFIQGIAIIVYRL 71
Query: 86 PQSWVGPKLPWKLLHAALHLMAFVLTVVGLVAVFTFHNHGRTANLYSLHSWLGITTVFLF 145
P +W KL K +HA L+ +A +L ++ +VAVF HN AN+YSLHSW+G+ V +
Sbjct: 72 PWTWKCSKLLMKSIHAGLNAVAAILAIISVVAVFENHNVNNIANMYSLHSWVGLIAVICY 131
Query: 146 ACQWFLGFAVFLLPWASMWLRSLLKPIHVFFGAAILSLSIASVISGINEKLFFSLKNTTR 205
Q GF+VFLLPWA + LR+ L PIHV+ G I IA+ + G+ EKL FSL++
Sbjct: 132 LLQLLSGFSVFLLPWAPLSLRAFLMPIHVYSGIVIFGTVIATALMGLTEKLIFSLRDPA- 190
Query: 206 PYHSLPSEAVFANSTGMLVVAFGLLVLYILLASSWKRPE 244
Y + P E VF N+ G+L++ FG L+ +I+ WKRP+
Sbjct: 191 -YSTFPPEGVFVNTLGLLILVFGALIFWIVTRPQWKRPK 228
>gi|63054832 cytochrome b-561 [Homo sapiens]
Length = 251
Score = 174 bits (440), Expect = 9e-44
Identities = 93/211 (44%), Positives = 123/211 (58%), Gaps = 6/211 (2%)
Query: 33 LGSMCILFTIYWMQYWRGGFAWNGSIYMFNWHPVLMVAGMVVFYGGASLVYRLPQSWVGP 92
LG + T W+ +RGG AW + FN HP+ MV G++ G A LVYR+ ++
Sbjct: 23 LGLTLVAMTGAWLGLYRGGIAWESDL-QFNAHPLCMVIGLIFLQGNALLVYRVFRNEA-- 79
Query: 93 KLPWKLLHAALHLMAFVLTVVGLVAVFTFHNHGRTANLYSLHSWLGITTVFLFACQWFLG 152
K K+LH LH+ A V+ +VGLVAVF +H A+LYSLHSW GI L+ QW +G
Sbjct: 80 KRTTKVLHGLLHIFALVIALVGLVAVFDYHRKKGYADLYSLHSWCGILVFVLYFVQWLVG 139
Query: 153 FAVFLLPWASMWLRSLLKPIHVFFGAAILSLSIASVISGINEKLFFSLKNTTRPYHSLPS 212
F+ FL P AS LRS +P H+FFGA I LS+ + + G+ E L F+L Y +
Sbjct: 140 FSFFLFPGASFSLRSRYRPQHIFFGATIFLLSVGTALLGLKEALLFNLGG---KYSAFEP 196
Query: 213 EAVFANSTGMLVVAFGLLVLYILLASSWKRP 243
E V AN G+L+ FG VLYIL + WKRP
Sbjct: 197 EGVLANVLGLLLACFGGAVLYILTRADWKRP 227
>gi|63054830 cytochrome b-561 [Homo sapiens]
Length = 251
Score = 174 bits (440), Expect = 9e-44
Identities = 93/211 (44%), Positives = 123/211 (58%), Gaps = 6/211 (2%)
Query: 33 LGSMCILFTIYWMQYWRGGFAWNGSIYMFNWHPVLMVAGMVVFYGGASLVYRLPQSWVGP 92
LG + T W+ +RGG AW + FN HP+ MV G++ G A LVYR+ ++
Sbjct: 23 LGLTLVAMTGAWLGLYRGGIAWESDL-QFNAHPLCMVIGLIFLQGNALLVYRVFRNEA-- 79
Query: 93 KLPWKLLHAALHLMAFVLTVVGLVAVFTFHNHGRTANLYSLHSWLGITTVFLFACQWFLG 152
K K+LH LH+ A V+ +VGLVAVF +H A+LYSLHSW GI L+ QW +G
Sbjct: 80 KRTTKVLHGLLHIFALVIALVGLVAVFDYHRKKGYADLYSLHSWCGILVFVLYFVQWLVG 139
Query: 153 FAVFLLPWASMWLRSLLKPIHVFFGAAILSLSIASVISGINEKLFFSLKNTTRPYHSLPS 212
F+ FL P AS LRS +P H+FFGA I LS+ + + G+ E L F+L Y +
Sbjct: 140 FSFFLFPGASFSLRSRYRPQHIFFGATIFLLSVGTALLGLKEALLFNLGG---KYSAFEP 196
Query: 213 EAVFANSTGMLVVAFGLLVLYILLASSWKRP 243
E V AN G+L+ FG VLYIL + WKRP
Sbjct: 197 EGVLANVLGLLLACFGGAVLYILTRADWKRP 227
>gi|63054828 cytochrome b-561 [Homo sapiens]
Length = 251
Score = 174 bits (440), Expect = 9e-44
Identities = 93/211 (44%), Positives = 123/211 (58%), Gaps = 6/211 (2%)
Query: 33 LGSMCILFTIYWMQYWRGGFAWNGSIYMFNWHPVLMVAGMVVFYGGASLVYRLPQSWVGP 92
LG + T W+ +RGG AW + FN HP+ MV G++ G A LVYR+ ++
Sbjct: 23 LGLTLVAMTGAWLGLYRGGIAWESDL-QFNAHPLCMVIGLIFLQGNALLVYRVFRNEA-- 79
Query: 93 KLPWKLLHAALHLMAFVLTVVGLVAVFTFHNHGRTANLYSLHSWLGITTVFLFACQWFLG 152
K K+LH LH+ A V+ +VGLVAVF +H A+LYSLHSW GI L+ QW +G
Sbjct: 80 KRTTKVLHGLLHIFALVIALVGLVAVFDYHRKKGYADLYSLHSWCGILVFVLYFVQWLVG 139
Query: 153 FAVFLLPWASMWLRSLLKPIHVFFGAAILSLSIASVISGINEKLFFSLKNTTRPYHSLPS 212
F+ FL P AS LRS +P H+FFGA I LS+ + + G+ E L F+L Y +
Sbjct: 140 FSFFLFPGASFSLRSRYRPQHIFFGATIFLLSVGTALLGLKEALLFNLGG---KYSAFEP 196
Query: 213 EAVFANSTGMLVVAFGLLVLYILLASSWKRP 243
E V AN G+L+ FG VLYIL + WKRP
Sbjct: 197 EGVLANVLGLLLACFGGAVLYILTRADWKRP 227
>gi|188497708 cytochrome b reductase 1 isoform 2 [Homo sapiens]
Length = 157
Score = 57.8 bits (138), Expect = 9e-09
Identities = 29/76 (38%), Positives = 42/76 (55%), Gaps = 3/76 (3%)
Query: 29 LLGS---LGSMCILFTIYWMQYWRGGFAWNGSIYMFNWHPVLMVAGMVVFYGGASLVYRL 85
LLGS +G + ++F + W+ ++R G W+GS FNWHPVLMV G V G AS +
Sbjct: 12 LLGSALLVGFLSVIFALVWVLHYREGLGWDGSALEFNWHPVLMVTGFVFIQGIASFRFFS 71
Query: 86 PQSWVGPKLPWKLLHA 101
+ +G + HA
Sbjct: 72 LSASMGSAFSPSISHA 87
>gi|32698982 cytochrome b-561 domain containing 1 isoform 2 [Homo
sapiens]
Length = 229
Score = 45.1 bits (105), Expect = 6e-05
Identities = 37/155 (23%), Positives = 64/155 (41%), Gaps = 8/155 (5%)
Query: 40 FTIYWMQYWRGGFAWNGSIYMFNWHPVLMVAGMVVFYGGASLVYRLPQS--WVGPKLPWK 97
FTI+ R G + +F+WHPV M + A L++ S + +
Sbjct: 37 FTIFLTALSRPGTS------LFSWHPVFMALAFCLCMAEAILLFSPEHSLFFFCSRKARI 90
Query: 98 LLHAALHLMAFVLTVVGLVAVFTFHNHGRTANLYSLHSWLGITTVFLFACQWFLGFAVFL 157
LH A +A + +GL + + +L S HSW+G T+ A Q G +
Sbjct: 91 RLHWAGQTLAILCAALGLGFIISSRTRSELPHLVSWHSWVGALTLLATAVQALCGLCLLC 150
Query: 158 LPWASMWLRSLLKPIHVFFGAAILSLSIASVISGI 192
A + + LK H+ G + ++ +V+ G+
Sbjct: 151 PRAARVSRVARLKLYHLTCGLVVYLMATVTVLLGM 185
>gi|5901884 cytochrome b-561 domain containing 2 [Homo sapiens]
Length = 222
Score = 40.0 bits (92), Expect = 0.002
Identities = 37/136 (27%), Positives = 54/136 (39%), Gaps = 4/136 (2%)
Query: 60 MFNWHPVLMVAGMVVFYGGASLVYRLPQSWVGPKLPWK---LLHAALHLMAFVLTVVGLV 116
+F+WHPVLM A LV+ P+S + L K H L L+A + ++GL
Sbjct: 44 LFSWHPVLMSLAFSFLMTEALLVFS-PESSLLHSLSRKGRARCHWVLQLLALLCALLGLG 102
Query: 117 AVFTFHNHGRTANLYSLHSWLGITTVFLFACQWFLGFAVFLLPWASMWLRSLLKPIHVFF 176
V A+L + H G+ V Q G + W + LK H
Sbjct: 103 LVILHKEQLGKAHLVTRHGQAGLLAVLWAGLQCSGGVGLLYPKLLPRWPLAKLKLYHATS 162
Query: 177 GAAILSLSIASVISGI 192
G L AS++ G+
Sbjct: 163 GLVGYLLGSASLLLGM 178
>gi|197304729 cytochrome b-561 domain containing 1 isoform 3 [Homo
sapiens]
Length = 172
Score = 36.6 bits (83), Expect = 0.022
Identities = 23/94 (24%), Positives = 41/94 (43%)
Query: 99 LHAALHLMAFVLTVVGLVAVFTFHNHGRTANLYSLHSWLGITTVFLFACQWFLGFAVFLL 158
LH A +A + +GL + + +L S HSW+G T+ A Q G +
Sbjct: 35 LHWAGQTLAILCAALGLGFIISSRTRSELPHLVSWHSWVGALTLLATAVQALCGLCLLCP 94
Query: 159 PWASMWLRSLLKPIHVFFGAAILSLSIASVISGI 192
A + + LK H+ G + ++ +V+ G+
Sbjct: 95 RAARVSRVARLKLYHLTCGLVVYLMATVTVLLGM 128
>gi|197304721 cytochrome b-561 domain containing 1 isoform 1 [Homo
sapiens]
Length = 251
Score = 36.6 bits (83), Expect = 0.022
Identities = 23/94 (24%), Positives = 41/94 (43%)
Query: 99 LHAALHLMAFVLTVVGLVAVFTFHNHGRTANLYSLHSWLGITTVFLFACQWFLGFAVFLL 158
LH A +A + +GL + + +L S HSW+G T+ A Q G +
Sbjct: 114 LHWAGQTLAILCAALGLGFIISSRTRSELPHLVSWHSWVGALTLLATAVQALCGLCLLCP 173
Query: 159 PWASMWLRSLLKPIHVFFGAAILSLSIASVISGI 192
A + + LK H+ G + ++ +V+ G+
Sbjct: 174 RAARVSRVARLKLYHLTCGLVVYLMATVTVLLGM 207
>gi|157671951 solute carrier family 4, anion exchanger, member 3
isoform 1 [Homo sapiens]
Length = 1232
Score = 31.2 bits (69), Expect = 0.94
Identities = 14/30 (46%), Positives = 21/30 (70%), Gaps = 1/30 (3%)
Query: 17 RMVSGR-FYLSCLLLGSLGSMCILFTIYWM 45
R++ G F+L LL+GSLG +C LF + W+
Sbjct: 1017 RLLKGSGFHLDLLLIGSLGGLCGLFGLPWL 1046
>gi|157671953 solute carrier family 4, anion exchanger, member 3
isoform 2 [Homo sapiens]
Length = 1259
Score = 31.2 bits (69), Expect = 0.94
Identities = 14/30 (46%), Positives = 21/30 (70%), Gaps = 1/30 (3%)
Query: 17 RMVSGR-FYLSCLLLGSLGSMCILFTIYWM 45
R++ G F+L LL+GSLG +C LF + W+
Sbjct: 1044 RLLKGSGFHLDLLLIGSLGGLCGLFGLPWL 1073
>gi|153266866 gamma-aminobutyric acid (GABA) receptor, rho 2
precursor [Homo sapiens]
Length = 490
Score = 30.4 bits (67), Expect = 1.6
Identities = 23/85 (27%), Positives = 37/85 (43%), Gaps = 11/85 (12%)
Query: 121 FHNHGRTANLYSLHSW-----LGITT---VFLFACQ-WFLGFAVFLLPWASMWLRSLLKP 171
FH R A YS W + T +F F Q +F + +L W S W+ P
Sbjct: 258 FHTTSRLA-FYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVP 316
Query: 172 IHVFFGAAILSLSIASVISGINEKL 196
V G + L++ ++I+G+N +
Sbjct: 317 ARVSLGITTV-LTMTTIITGVNASM 340
>gi|148746216 lipocalin-interacting membrane receptor [Homo sapiens]
Length = 489
Score = 29.3 bits (64), Expect = 3.6
Identities = 24/107 (22%), Positives = 50/107 (46%), Gaps = 3/107 (2%)
Query: 55 NGSIYMFNWHPVLMVAGM-VVFYGGASLVYRLPQSWVGPK--LPWKLLHAALHLMAFVLT 111
NGS+ W+ V + + + ++F + + + + G + + ++ + LM L
Sbjct: 105 NGSLIHGLWNLVFLFSNLSLIFLMPFAYFFTESEGFAGSRKGVLGRVYETVVMLMLLTLL 164
Query: 112 VVGLVAVFTFHNHGRTANLYSLHSWLGITTVFLFACQWFLGFAVFLL 158
V+G+V V + AN SL+ + +L++C FLG + L+
Sbjct: 165 VLGMVWVASAIVDKNKANRESLYDFWEYYLPYLYSCISFLGVLLLLV 211
>gi|194097386 gamma-aminobutyric acid (GABA) receptor, rho 1 [Homo
sapiens]
Length = 479
Score = 29.3 bits (64), Expect = 3.6
Identities = 15/56 (26%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Query: 142 VFLFACQ-WFLGFAVFLLPWASMWLRSLLKPIHVFFGAAILSLSIASVISGINEKL 196
+F F Q +F + +L W S W+ P V G + L+++++I+G+N +
Sbjct: 281 IFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVPLGITTV-LTMSTIITGVNASM 335
>gi|49170034 integrin, alpha 8 [Homo sapiens]
Length = 1063
Score = 29.3 bits (64), Expect = 3.6
Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 7/43 (16%)
Query: 222 MLVVAFGLLVLYILLASSWK-------RPEPGILTDRQPLLHD 257
+L + GLLVL IL + WK RP +TDR+ L +D
Sbjct: 1016 ILAILLGLLVLAILTLALWKCGFFDRARPPQEDMTDREQLTND 1058
>gi|6005701 ATP-binding cassette, sub-family A member 8 [Homo
sapiens]
Length = 1581
Score = 28.9 bits (63), Expect = 4.7
Identities = 52/184 (28%), Positives = 76/184 (41%), Gaps = 38/184 (20%)
Query: 94 LPWKLLHAA-LHLMAFVLTVV----------GLVAVFT-FHNHGRT----ANLYSL---H 134
L W LL+A + +MA L +V G + VF+ F +G + A L S+
Sbjct: 267 LSWGLLYAGFIFIMALFLALVIRSTQFIILSGFMVVFSLFLLYGLSLVALAFLMSILVKK 326
Query: 135 SWLGITTVFLFACQW-FLGFAVFL--LPWASMWLRSLLKPIHVFFGAAILSLSIASVISG 191
S+L VFL W LGF LP + W+ SLL P G A L
Sbjct: 327 SFLTGLVVFLLTVFWGCLGFTSLYRHLPASLEWILSLLSPFAFMLGMAQLL--------- 377
Query: 192 INEKLFFSLKNTTRPYHSLPSEAVFANSTGMLVVAFGLLVLYILLASSWKRPEPGILTDR 251
L + L + P+ S S + A + ++AF LY+ LA +++ P R
Sbjct: 378 ---HLDYDLNSNAFPHPSDGSNLIVATN---FMLAFD-TCLYLALAIYFEKILPNEYGHR 430
Query: 252 QPLL 255
+P L
Sbjct: 431 RPPL 434
>gi|4505561 pyrimidinergic receptor P2Y4 [Homo sapiens]
Length = 365
Score = 28.9 bits (63), Expect = 4.7
Identities = 56/209 (26%), Positives = 82/209 (39%), Gaps = 40/209 (19%)
Query: 66 VLMVAGMVVFYGGASLVYRLPQSW--VGPKLPWK-----LLHAALHLMAFVLTVVGLVAV 118
+L V+ VVF G L P W + PW + H AL +VL++ L+
Sbjct: 37 LLPVSYAVVFVLGLGL--NAPTLWLFIFRLRPWDATATYMFHLALSDTLYVLSLPTLIYY 94
Query: 119 FTFHNHGRTAN-----LYSLHSWLGITTVFLFAC---QWFLGFAVFLLPWASMWLRSLLK 170
+ HNH + L W +V C +LG L A W R L
Sbjct: 95 YAAHNHWPFGTEICKFVRFLFYWNLYCSVLFLTCISVHRYLGICHPLR--ALRWGRPRL- 151
Query: 171 PIHVFFGAAILSLSIASVISG-INEKLFF---SLKNTTRPYHSLPSEAVFAN----STGM 222
A +L L++ V++G + LFF S K TT H F + S+ +
Sbjct: 152 -------AGLLCLAVWLVVAGCLVPNLFFVTTSNKGTTVLCHDTTRPEEFDHYVHFSSAV 204
Query: 223 LVVAFGL-----LVLYILLASSWKRPEPG 246
+ + FG+ LV Y L+A +P PG
Sbjct: 205 MGLLFGVPCLVTLVCYGLMARRLYQPLPG 233
>gi|52353953 olfactory receptor, family 2, subfamily AG, member 2
[Homo sapiens]
Length = 316
Score = 28.1 bits (61), Expect = 8.0
Identities = 14/27 (51%), Positives = 18/27 (66%), Gaps = 2/27 (7%)
Query: 67 LMVAGMVVFYGGASLVYRLPQSWVGPK 93
L+V GM FYG A+ +Y LP S+ PK
Sbjct: 245 LIVVGM--FYGAATFMYVLPSSFHSPK 269
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.330 0.142 0.477
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,923,530
Number of Sequences: 37866
Number of extensions: 412028
Number of successful extensions: 1059
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 1031
Number of HSP's gapped (non-prelim): 21
length of query: 259
length of database: 18,247,518
effective HSP length: 100
effective length of query: 159
effective length of database: 14,460,918
effective search space: 2299285962
effective search space used: 2299285962
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.9 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.