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Search of human proteins with 239757552
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239757552 PREDICTED: similar to hCG2006635, partial [Homo
sapiens]
(304 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239757552 PREDICTED: similar to hCG2006635, partial [Homo sap... 645 0.0
gi|239746033 PREDICTED: hypothetical protein XP_002344174 [Homo ... 201 7e-52
gi|239752592 PREDICTED: hypothetical protein XP_002348308, parti... 197 1e-50
gi|14670354 general transcription factor II, i isoform 3 [Homo s... 129 3e-30
gi|14670352 general transcription factor II, i isoform 2 [Homo s... 129 3e-30
gi|14670350 general transcription factor II, i isoform 1 [Homo s... 129 3e-30
gi|169881252 general transcription factor II, i isoform 4 [Homo ... 129 3e-30
gi|48762700 GTF2I repeat domain containing 2 [Homo sapiens] 118 6e-27
gi|51241788 GTF2I repeat domain containing 2B [Homo sapiens] 118 6e-27
gi|7705387 GTF2I repeat domain containing 1 isoform 1 [Homo sapi... 66 3e-11
gi|15011924 GTF2I repeat domain containing 1 isoform 2 [Homo sap... 66 3e-11
gi|38505170 Ras protein-specific guanine nucleotide-releasing fa... 43 3e-04
gi|37537692 proline-rich protein BstNI subfamily 4 precursor [Ho... 43 4e-04
gi|209571537 proline-rich protein BstNI subfamily 2 [Homo sapiens] 42 5e-04
gi|169210212 PREDICTED: hypothetical protein [Homo sapiens] 42 7e-04
gi|239755981 PREDICTED: hypothetical protein XP_002344766 [Homo ... 42 7e-04
gi|169210418 PREDICTED: hypothetical protein [Homo sapiens] 42 7e-04
gi|239750506 PREDICTED: hypothetical protein XP_002347417 [Homo ... 42 7e-04
gi|169209848 PREDICTED: hypothetical protein [Homo sapiens] 42 7e-04
gi|239744803 PREDICTED: hypothetical protein XP_002343287 [Homo ... 42 7e-04
gi|117306167 proline-rich protein BstNI subfamily 3 precursor [H... 40 0.003
gi|41349482 proline-rich protein BstNI subfamily 1 isoform 1 pre... 39 0.004
gi|32698936 B-cell CLL/lymphoma 9-like [Homo sapiens] 39 0.006
gi|239746530 PREDICTED: hypothetical protein XP_002343754 [Homo ... 36 0.037
gi|4826998 splicing factor proline/glutamine rich (polypyrimidin... 36 0.037
gi|41349484 proline-rich protein BstNI subfamily 1 isoform 2 pre... 36 0.037
gi|239754606 PREDICTED: similar to hCG1983816 [Homo sapiens] 36 0.048
gi|239749152 PREDICTED: similar to hCG1983816 [Homo sapiens] 36 0.048
gi|239508897 PREDICTED: similar to hCG1983816 [Homo sapiens] 36 0.048
gi|239756441 PREDICTED: hypothetical protein LOC388199 [Homo sap... 35 0.063
>gi|239757552 PREDICTED: similar to hCG2006635, partial [Homo
sapiens]
Length = 304
Score = 645 bits (1663), Expect = 0.0
Identities = 304/304 (100%), Positives = 304/304 (100%)
Query: 1 KVYNPGESDECRCCRNGNTRKKTVEDYFCFCCRKALQKPTEVPVPYEKMLQDQSALIVQG 60
KVYNPGESDECRCCRNGNTRKKTVEDYFCFCCRKALQKPTEVPVPYEKMLQDQSALIVQG
Sbjct: 1 KVYNPGESDECRCCRNGNTRKKTVEDYFCFCCRKALQKPTEVPVPYEKMLQDQSALIVQG 60
Query: 61 LPEGVAFKHPENYDLATLEWILEYTAGISFIIKSSGEPQGRTPPLRLNQAVGPQLCEGGN 120
LPEGVAFKHPENYDLATLEWILEYTAGISFIIKSSGEPQGRTPPLRLNQAVGPQLCEGGN
Sbjct: 61 LPEGVAFKHPENYDLATLEWILEYTAGISFIIKSSGEPQGRTPPLRLNQAVGPQLCEGGN 120
Query: 121 LPQSLILAAIHGPEVASLRCQRGPRKSRAQGGRAVHSATLSGLGPALQPPPWTQVQLPPE 180
LPQSLILAAIHGPEVASLRCQRGPRKSRAQGGRAVHSATLSGLGPALQPPPWTQVQLPPE
Sbjct: 121 LPQSLILAAIHGPEVASLRCQRGPRKSRAQGGRAVHSATLSGLGPALQPPPWTQVQLPPE 180
Query: 181 HGTRQRGLQPGPCPCQQQGGYLGQKLPGRLSEGVGPQLQEGGNRRSARPWRLHGAQYQGP 240
HGTRQRGLQPGPCPCQQQGGYLGQKLPGRLSEGVGPQLQEGGNRRSARPWRLHGAQYQGP
Sbjct: 181 HGTRQRGLQPGPCPCQQQGGYLGQKLPGRLSEGVGPQLQEGGNRRSARPWRLHGAQYQGP 240
Query: 241 APGSWVEEGPGAAMSSRPCCREPHTFRSREARQPGSASAAGATCTRCPVERGQGACLLSL 300
APGSWVEEGPGAAMSSRPCCREPHTFRSREARQPGSASAAGATCTRCPVERGQGACLLSL
Sbjct: 241 APGSWVEEGPGAAMSSRPCCREPHTFRSREARQPGSASAAGATCTRCPVERGQGACLLSL 300
Query: 301 LSCA 304
LSCA
Sbjct: 301 LSCA 304
>gi|239746033 PREDICTED: hypothetical protein XP_002344174 [Homo
sapiens]
Length = 145
Score = 201 bits (511), Expect = 7e-52
Identities = 93/93 (100%), Positives = 93/93 (100%)
Query: 1 KVYNPGESDECRCCRNGNTRKKTVEDYFCFCCRKALQKPTEVPVPYEKMLQDQSALIVQG 60
KVYNPGESDECRCCRNGNTRKKTVEDYFCFCCRKALQKPTEVPVPYEKMLQDQSALIVQG
Sbjct: 52 KVYNPGESDECRCCRNGNTRKKTVEDYFCFCCRKALQKPTEVPVPYEKMLQDQSALIVQG 111
Query: 61 LPEGVAFKHPENYDLATLEWILEYTAGISFIIK 93
LPEGVAFKHPENYDLATLEWILEYTAGISFIIK
Sbjct: 112 LPEGVAFKHPENYDLATLEWILEYTAGISFIIK 144
>gi|239752592 PREDICTED: hypothetical protein XP_002348308,
partial [Homo sapiens]
Length = 94
Score = 197 bits (500), Expect = 1e-50
Identities = 91/93 (97%), Positives = 91/93 (97%)
Query: 1 KVYNPGESDECRCCRNGNTRKKTVEDYFCFCCRKALQKPTEVPVPYEKMLQDQSALIVQG 60
KVYNPGESDECRCCRNGNTRKKTVEDYFCFCC K LQKPTEVPVPYEKMLQDQSALIVQG
Sbjct: 1 KVYNPGESDECRCCRNGNTRKKTVEDYFCFCCLKTLQKPTEVPVPYEKMLQDQSALIVQG 60
Query: 61 LPEGVAFKHPENYDLATLEWILEYTAGISFIIK 93
LPEGVAFKHPENYDLATLEWILEYTAGISFIIK
Sbjct: 61 LPEGVAFKHPENYDLATLEWILEYTAGISFIIK 93
>gi|14670354 general transcription factor II, i isoform 3 [Homo
sapiens]
Length = 977
Score = 129 bits (324), Expect = 3e-30
Identities = 62/75 (82%), Positives = 67/75 (89%)
Query: 19 TRKKTVEDYFCFCCRKALQKPTEVPVPYEKMLQDQSALIVQGLPEGVAFKHPENYDLATL 78
T +KTVEDYFCFC KAL K T VPVPYEKML+DQSA++VQGLPEGVAFKHPENYDLATL
Sbjct: 111 TLRKTVEDYFCFCYGKALGKSTVVPVPYEKMLRDQSAVVVQGLPEGVAFKHPENYDLATL 170
Query: 79 EWILEYTAGISFIIK 93
+WILE AGISFIIK
Sbjct: 171 KWILENKAGISFIIK 185
Score = 50.1 bits (118), Expect = 2e-06
Identities = 32/98 (32%), Positives = 45/98 (45%), Gaps = 8/98 (8%)
Query: 21 KKTVEDYFCFCCRKALQKPTEVPVPYEKMLQDQSALIVQGLPEGVAFKHPENYDLATLEW 80
K+ VE+ F C +AL V VP+ V+GLPEGV F+ P + + LE
Sbjct: 713 KQKVENLFNEKCGEALGLKQAVKVPFALFESFPEDFYVEGLPEGVPFRRPSTFGIPRLEK 772
Query: 81 ILEYTAGISFIIKS--------SGEPQGRTPPLRLNQA 110
IL A I FIIK ++PP ++N +
Sbjct: 773 ILRNKAKIKFIIKKPEMFETAIKESTSSKSPPRKINSS 810
Score = 48.5 bits (114), Expect = 7e-06
Identities = 26/73 (35%), Positives = 38/73 (52%)
Query: 21 KKTVEDYFCFCCRKALQKPTEVPVPYEKMLQDQSALIVQGLPEGVAFKHPENYDLATLEW 80
+K V+ FC +AL VPY+K + L V+GLPE + F+ P Y + LE
Sbjct: 446 RKMVDQLFCKKFAEALGSTEAKAVPYQKFEAHPNDLYVEGLPENIPFRSPSWYGIPRLEK 505
Query: 81 ILEYTAGISFIIK 93
I++ I F+IK
Sbjct: 506 IIQVGNRIKFVIK 518
Score = 46.2 bits (108), Expect = 4e-05
Identities = 26/73 (35%), Positives = 37/73 (50%)
Query: 21 KKTVEDYFCFCCRKALQKPTEVPVPYEKMLQDQSALIVQGLPEGVAFKHPENYDLATLEW 80
+K VE+ F +A++ V +PY L V+GLPEG+ F+ P Y + LE
Sbjct: 341 RKQVEELFERKYAQAIKAKGPVTIPYPLFQSHVEDLYVEGLPEGIPFRRPSTYGIPRLER 400
Query: 81 ILEYTAGISFIIK 93
IL I F+IK
Sbjct: 401 ILLAKERIRFVIK 413
Score = 44.7 bits (104), Expect = 1e-04
Identities = 25/73 (34%), Positives = 38/73 (52%)
Query: 21 KKTVEDYFCFCCRKALQKPTEVPVPYEKMLQDQSALIVQGLPEGVAFKHPENYDLATLEW 80
+K VE+ F +AL V VPY + L V+GLPEG+ F+ P + + LE
Sbjct: 551 RKQVEEIFNLKFAQALGLTEAVKVPYPVFESNPEFLYVEGLPEGIPFRSPTWFGIPRLER 610
Query: 81 ILEYTAGISFIIK 93
I+ + I F++K
Sbjct: 611 IVRGSNKIKFVVK 623
Score = 41.2 bits (95), Expect = 0.001
Identities = 21/72 (29%), Positives = 38/72 (52%)
Query: 21 KKTVEDYFCFCCRKALQKPTEVPVPYEKMLQDQSALIVQGLPEGVAFKHPENYDLATLEW 80
++ V D F +A+ V VPY K+ + ++V G+P GV+FK P +++++
Sbjct: 848 REQVNDLFSRKFGEAIGMGFPVKVPYRKITINPGCVVVDGMPPGVSFKAPSYLEISSMRR 907
Query: 81 ILEYTAGISFII 92
IL+ I F +
Sbjct: 908 ILDSAEFIKFTV 919
>gi|14670352 general transcription factor II, i isoform 2 [Homo
sapiens]
Length = 978
Score = 129 bits (324), Expect = 3e-30
Identities = 62/75 (82%), Positives = 67/75 (89%)
Query: 19 TRKKTVEDYFCFCCRKALQKPTEVPVPYEKMLQDQSALIVQGLPEGVAFKHPENYDLATL 78
T +KTVEDYFCFC KAL K T VPVPYEKML+DQSA++VQGLPEGVAFKHPENYDLATL
Sbjct: 111 TLRKTVEDYFCFCYGKALGKSTVVPVPYEKMLRDQSAVVVQGLPEGVAFKHPENYDLATL 170
Query: 79 EWILEYTAGISFIIK 93
+WILE AGISFIIK
Sbjct: 171 KWILENKAGISFIIK 185
Score = 50.1 bits (118), Expect = 2e-06
Identities = 32/98 (32%), Positives = 45/98 (45%), Gaps = 8/98 (8%)
Query: 21 KKTVEDYFCFCCRKALQKPTEVPVPYEKMLQDQSALIVQGLPEGVAFKHPENYDLATLEW 80
K+ VE+ F C +AL V VP+ V+GLPEGV F+ P + + LE
Sbjct: 714 KQKVENLFNEKCGEALGLKQAVKVPFALFESFPEDFYVEGLPEGVPFRRPSTFGIPRLEK 773
Query: 81 ILEYTAGISFIIKS--------SGEPQGRTPPLRLNQA 110
IL A I FIIK ++PP ++N +
Sbjct: 774 ILRNKAKIKFIIKKPEMFETAIKESTSSKSPPRKINSS 811
Score = 48.5 bits (114), Expect = 7e-06
Identities = 26/73 (35%), Positives = 38/73 (52%)
Query: 21 KKTVEDYFCFCCRKALQKPTEVPVPYEKMLQDQSALIVQGLPEGVAFKHPENYDLATLEW 80
+K V+ FC +AL VPY+K + L V+GLPE + F+ P Y + LE
Sbjct: 447 RKMVDQLFCKKFAEALGSTEAKAVPYQKFEAHPNDLYVEGLPENIPFRSPSWYGIPRLEK 506
Query: 81 ILEYTAGISFIIK 93
I++ I F+IK
Sbjct: 507 IIQVGNRIKFVIK 519
Score = 46.2 bits (108), Expect = 4e-05
Identities = 26/73 (35%), Positives = 37/73 (50%)
Query: 21 KKTVEDYFCFCCRKALQKPTEVPVPYEKMLQDQSALIVQGLPEGVAFKHPENYDLATLEW 80
+K VE+ F +A++ V +PY L V+GLPEG+ F+ P Y + LE
Sbjct: 342 RKQVEELFERKYAQAIKAKGPVTIPYPLFQSHVEDLYVEGLPEGIPFRRPSTYGIPRLER 401
Query: 81 ILEYTAGISFIIK 93
IL I F+IK
Sbjct: 402 ILLAKERIRFVIK 414
Score = 44.7 bits (104), Expect = 1e-04
Identities = 25/73 (34%), Positives = 38/73 (52%)
Query: 21 KKTVEDYFCFCCRKALQKPTEVPVPYEKMLQDQSALIVQGLPEGVAFKHPENYDLATLEW 80
+K VE+ F +AL V VPY + L V+GLPEG+ F+ P + + LE
Sbjct: 552 RKQVEEIFNLKFAQALGLTEAVKVPYPVFESNPEFLYVEGLPEGIPFRSPTWFGIPRLER 611
Query: 81 ILEYTAGISFIIK 93
I+ + I F++K
Sbjct: 612 IVRGSNKIKFVVK 624
Score = 41.2 bits (95), Expect = 0.001
Identities = 21/72 (29%), Positives = 38/72 (52%)
Query: 21 KKTVEDYFCFCCRKALQKPTEVPVPYEKMLQDQSALIVQGLPEGVAFKHPENYDLATLEW 80
++ V D F +A+ V VPY K+ + ++V G+P GV+FK P +++++
Sbjct: 849 REQVNDLFSRKFGEAIGMGFPVKVPYRKITINPGCVVVDGMPPGVSFKAPSYLEISSMRR 908
Query: 81 ILEYTAGISFII 92
IL+ I F +
Sbjct: 909 ILDSAEFIKFTV 920
>gi|14670350 general transcription factor II, i isoform 1 [Homo
sapiens]
Length = 998
Score = 129 bits (324), Expect = 3e-30
Identities = 62/75 (82%), Positives = 67/75 (89%)
Query: 19 TRKKTVEDYFCFCCRKALQKPTEVPVPYEKMLQDQSALIVQGLPEGVAFKHPENYDLATL 78
T +KTVEDYFCFC KAL K T VPVPYEKML+DQSA++VQGLPEGVAFKHPENYDLATL
Sbjct: 111 TLRKTVEDYFCFCYGKALGKSTVVPVPYEKMLRDQSAVVVQGLPEGVAFKHPENYDLATL 170
Query: 79 EWILEYTAGISFIIK 93
+WILE AGISFIIK
Sbjct: 171 KWILENKAGISFIIK 185
Score = 50.1 bits (118), Expect = 2e-06
Identities = 32/98 (32%), Positives = 45/98 (45%), Gaps = 8/98 (8%)
Query: 21 KKTVEDYFCFCCRKALQKPTEVPVPYEKMLQDQSALIVQGLPEGVAFKHPENYDLATLEW 80
K+ VE+ F C +AL V VP+ V+GLPEGV F+ P + + LE
Sbjct: 734 KQKVENLFNEKCGEALGLKQAVKVPFALFESFPEDFYVEGLPEGVPFRRPSTFGIPRLEK 793
Query: 81 ILEYTAGISFIIKS--------SGEPQGRTPPLRLNQA 110
IL A I FIIK ++PP ++N +
Sbjct: 794 ILRNKAKIKFIIKKPEMFETAIKESTSSKSPPRKINSS 831
Score = 48.5 bits (114), Expect = 7e-06
Identities = 26/73 (35%), Positives = 38/73 (52%)
Query: 21 KKTVEDYFCFCCRKALQKPTEVPVPYEKMLQDQSALIVQGLPEGVAFKHPENYDLATLEW 80
+K V+ FC +AL VPY+K + L V+GLPE + F+ P Y + LE
Sbjct: 467 RKMVDQLFCKKFAEALGSTEAKAVPYQKFEAHPNDLYVEGLPENIPFRSPSWYGIPRLEK 526
Query: 81 ILEYTAGISFIIK 93
I++ I F+IK
Sbjct: 527 IIQVGNRIKFVIK 539
Score = 46.2 bits (108), Expect = 4e-05
Identities = 26/73 (35%), Positives = 37/73 (50%)
Query: 21 KKTVEDYFCFCCRKALQKPTEVPVPYEKMLQDQSALIVQGLPEGVAFKHPENYDLATLEW 80
+K VE+ F +A++ V +PY L V+GLPEG+ F+ P Y + LE
Sbjct: 362 RKQVEELFERKYAQAIKAKGPVTIPYPLFQSHVEDLYVEGLPEGIPFRRPSTYGIPRLER 421
Query: 81 ILEYTAGISFIIK 93
IL I F+IK
Sbjct: 422 ILLAKERIRFVIK 434
Score = 44.7 bits (104), Expect = 1e-04
Identities = 25/73 (34%), Positives = 38/73 (52%)
Query: 21 KKTVEDYFCFCCRKALQKPTEVPVPYEKMLQDQSALIVQGLPEGVAFKHPENYDLATLEW 80
+K VE+ F +AL V VPY + L V+GLPEG+ F+ P + + LE
Sbjct: 572 RKQVEEIFNLKFAQALGLTEAVKVPYPVFESNPEFLYVEGLPEGIPFRSPTWFGIPRLER 631
Query: 81 ILEYTAGISFIIK 93
I+ + I F++K
Sbjct: 632 IVRGSNKIKFVVK 644
Score = 41.2 bits (95), Expect = 0.001
Identities = 21/72 (29%), Positives = 38/72 (52%)
Query: 21 KKTVEDYFCFCCRKALQKPTEVPVPYEKMLQDQSALIVQGLPEGVAFKHPENYDLATLEW 80
++ V D F +A+ V VPY K+ + ++V G+P GV+FK P +++++
Sbjct: 869 REQVNDLFSRKFGEAIGMGFPVKVPYRKITINPGCVVVDGMPPGVSFKAPSYLEISSMRR 928
Query: 81 ILEYTAGISFII 92
IL+ I F +
Sbjct: 929 ILDSAEFIKFTV 940
>gi|169881252 general transcription factor II, i isoform 4 [Homo
sapiens]
Length = 957
Score = 129 bits (324), Expect = 3e-30
Identities = 62/75 (82%), Positives = 67/75 (89%)
Query: 19 TRKKTVEDYFCFCCRKALQKPTEVPVPYEKMLQDQSALIVQGLPEGVAFKHPENYDLATL 78
T +KTVEDYFCFC KAL K T VPVPYEKML+DQSA++VQGLPEGVAFKHPENYDLATL
Sbjct: 111 TLRKTVEDYFCFCYGKALGKSTVVPVPYEKMLRDQSAVVVQGLPEGVAFKHPENYDLATL 170
Query: 79 EWILEYTAGISFIIK 93
+WILE AGISFIIK
Sbjct: 171 KWILENKAGISFIIK 185
Score = 50.1 bits (118), Expect = 2e-06
Identities = 32/98 (32%), Positives = 45/98 (45%), Gaps = 8/98 (8%)
Query: 21 KKTVEDYFCFCCRKALQKPTEVPVPYEKMLQDQSALIVQGLPEGVAFKHPENYDLATLEW 80
K+ VE+ F C +AL V VP+ V+GLPEGV F+ P + + LE
Sbjct: 693 KQKVENLFNEKCGEALGLKQAVKVPFALFESFPEDFYVEGLPEGVPFRRPSTFGIPRLEK 752
Query: 81 ILEYTAGISFIIKS--------SGEPQGRTPPLRLNQA 110
IL A I FIIK ++PP ++N +
Sbjct: 753 ILRNKAKIKFIIKKPEMFETAIKESTSSKSPPRKINSS 790
Score = 48.5 bits (114), Expect = 7e-06
Identities = 26/73 (35%), Positives = 38/73 (52%)
Query: 21 KKTVEDYFCFCCRKALQKPTEVPVPYEKMLQDQSALIVQGLPEGVAFKHPENYDLATLEW 80
+K V+ FC +AL VPY+K + L V+GLPE + F+ P Y + LE
Sbjct: 426 RKMVDQLFCKKFAEALGSTEAKAVPYQKFEAHPNDLYVEGLPENIPFRSPSWYGIPRLEK 485
Query: 81 ILEYTAGISFIIK 93
I++ I F+IK
Sbjct: 486 IIQVGNRIKFVIK 498
Score = 46.2 bits (108), Expect = 4e-05
Identities = 26/73 (35%), Positives = 37/73 (50%)
Query: 21 KKTVEDYFCFCCRKALQKPTEVPVPYEKMLQDQSALIVQGLPEGVAFKHPENYDLATLEW 80
+K VE+ F +A++ V +PY L V+GLPEG+ F+ P Y + LE
Sbjct: 321 RKQVEELFERKYAQAIKAKGPVTIPYPLFQSHVEDLYVEGLPEGIPFRRPSTYGIPRLER 380
Query: 81 ILEYTAGISFIIK 93
IL I F+IK
Sbjct: 381 ILLAKERIRFVIK 393
Score = 44.7 bits (104), Expect = 1e-04
Identities = 25/73 (34%), Positives = 38/73 (52%)
Query: 21 KKTVEDYFCFCCRKALQKPTEVPVPYEKMLQDQSALIVQGLPEGVAFKHPENYDLATLEW 80
+K VE+ F +AL V VPY + L V+GLPEG+ F+ P + + LE
Sbjct: 531 RKQVEEIFNLKFAQALGLTEAVKVPYPVFESNPEFLYVEGLPEGIPFRSPTWFGIPRLER 590
Query: 81 ILEYTAGISFIIK 93
I+ + I F++K
Sbjct: 591 IVRGSNKIKFVVK 603
Score = 41.2 bits (95), Expect = 0.001
Identities = 21/72 (29%), Positives = 38/72 (52%)
Query: 21 KKTVEDYFCFCCRKALQKPTEVPVPYEKMLQDQSALIVQGLPEGVAFKHPENYDLATLEW 80
++ V D F +A+ V VPY K+ + ++V G+P GV+FK P +++++
Sbjct: 828 REQVNDLFSRKFGEAIGMGFPVKVPYRKITINPGCVVVDGMPPGVSFKAPSYLEISSMRR 887
Query: 81 ILEYTAGISFII 92
IL+ I F +
Sbjct: 888 ILDSAEFIKFTV 899
>gi|48762700 GTF2I repeat domain containing 2 [Homo sapiens]
Length = 949
Score = 118 bits (296), Expect = 6e-27
Identities = 56/72 (77%), Positives = 62/72 (86%)
Query: 21 KKTVEDYFCFCCRKALQKPTEVPVPYEKMLQDQSALIVQGLPEGVAFKHPENYDLATLEW 80
+K VEDYFCFC KAL VPVPYEKML+DQSA++VQGLPEGVAF+HPENYDLATL+W
Sbjct: 108 RKAVEDYFCFCYGKALGTTVMVPVPYEKMLRDQSAVVVQGLPEGVAFQHPENYDLATLKW 167
Query: 81 ILEYTAGISFII 92
ILE AGISFII
Sbjct: 168 ILENKAGISFII 179
Score = 40.8 bits (94), Expect = 0.002
Identities = 21/72 (29%), Positives = 37/72 (51%)
Query: 21 KKTVEDYFCFCCRKALQKPTEVPVPYEKMLQDQSALIVQGLPEGVAFKHPENYDLATLEW 80
++ V D F +A+ V VPY K+ + +++ G+P GV FK P +++++
Sbjct: 333 REQVNDLFSRKFGEAIGVDFPVKVPYRKITFNPGCVVIDGMPPGVVFKAPGYLEISSMRR 392
Query: 81 ILEYTAGISFII 92
ILE I F +
Sbjct: 393 ILEAAEFIKFTV 404
>gi|51241788 GTF2I repeat domain containing 2B [Homo sapiens]
Length = 949
Score = 118 bits (296), Expect = 6e-27
Identities = 56/72 (77%), Positives = 62/72 (86%)
Query: 21 KKTVEDYFCFCCRKALQKPTEVPVPYEKMLQDQSALIVQGLPEGVAFKHPENYDLATLEW 80
+K VEDYFCFC KAL VPVPYEKML+DQSA++VQGLPEGVAF+HPENYDLATL+W
Sbjct: 108 RKAVEDYFCFCYGKALGTTVMVPVPYEKMLRDQSAVVVQGLPEGVAFQHPENYDLATLKW 167
Query: 81 ILEYTAGISFII 92
ILE AGISFII
Sbjct: 168 ILENKAGISFII 179
Score = 40.8 bits (94), Expect = 0.002
Identities = 21/72 (29%), Positives = 37/72 (51%)
Query: 21 KKTVEDYFCFCCRKALQKPTEVPVPYEKMLQDQSALIVQGLPEGVAFKHPENYDLATLEW 80
++ V D F +A+ V VPY K+ + +++ G+P GV FK P +++++
Sbjct: 333 REQVNDLFSRKFGEAIGVDFPVKVPYRKITFNPGCVVIDGMPPGVVFKAPGYLEISSMRR 392
Query: 81 ILEYTAGISFII 92
ILE I F +
Sbjct: 393 ILEAAEFIKFTV 404
>gi|7705387 GTF2I repeat domain containing 1 isoform 1 [Homo
sapiens]
Length = 959
Score = 66.2 bits (160), Expect = 3e-11
Identities = 35/81 (43%), Positives = 50/81 (61%)
Query: 21 KKTVEDYFCFCCRKALQKPTEVPVPYEKMLQDQSALIVQGLPEGVAFKHPENYDLATLEW 80
+K VE+ F +AL + + VP+PYE++L++ L VQGLPEG+AF+ P YD L
Sbjct: 129 RKMVEEVFDVLYSEALGRASVVPLPYERLLREPGLLAVQGLPEGLAFRRPAEYDPKALMA 188
Query: 81 ILEYTAGISFIIKSSGEPQGR 101
ILE++ I F +K E GR
Sbjct: 189 ILEHSHRIRFKLKRPLEDGGR 209
Score = 50.4 bits (119), Expect = 2e-06
Identities = 29/73 (39%), Positives = 38/73 (52%)
Query: 21 KKTVEDYFCFCCRKALQKPTEVPVPYEKMLQDQSALIVQGLPEGVAFKHPENYDLATLEW 80
+K VE F KA+ V VPY K L L V GLPEG++ + P + +A L
Sbjct: 566 RKQVELLFNTRYAKAIGISEPVKVPYSKFLMHPEELFVVGLPEGISLRRPNCFGIAKLRK 625
Query: 81 ILEYTAGISFIIK 93
ILE + I F+IK
Sbjct: 626 ILEASNSIQFVIK 638
Score = 48.9 bits (115), Expect = 6e-06
Identities = 29/76 (38%), Positives = 41/76 (53%)
Query: 18 NTRKKTVEDYFCFCCRKALQKPTEVPVPYEKMLQDQSALIVQGLPEGVAFKHPENYDLAT 77
NT ++ V+ F +AL VPVPY K+ D A+ + G+P+ + FK P Y +
Sbjct: 349 NTLRECVQILFNSRYAEALGLDHMVPVPYRKIACDPEAVEIVGIPDKIPFKRPCTYGVPK 408
Query: 78 LEWILEYTAGISFIIK 93
L+ ILE I FIIK
Sbjct: 409 LKRILEERHSIHFIIK 424
Score = 43.9 bits (102), Expect = 2e-04
Identities = 24/75 (32%), Positives = 40/75 (53%)
Query: 18 NTRKKTVEDYFCFCCRKALQKPTEVPVPYEKMLQDQSALIVQGLPEGVAFKHPENYDLAT 77
NT ++ V+D F +AL V VPY+++ + ++I++GLP G+ F+ P +
Sbjct: 703 NTLREQVQDLFNKKYGEALGIKYPVQVPYKRIKSNPGSVIIEGLPPGIPFRKPCTFGSQN 762
Query: 78 LEWILEYTAGISFII 92
LE IL I F +
Sbjct: 763 LERILAVADKIKFTV 777
Score = 40.0 bits (92), Expect = 0.003
Identities = 23/78 (29%), Positives = 41/78 (52%)
Query: 21 KKTVEDYFCFCCRKALQKPTEVPVPYEKMLQDQSALIVQGLPEGVAFKHPENYDLATLEW 80
++ V++ F +AL V VPY+ + A+ V GLP+ + F++P YD+ LE
Sbjct: 803 REQVKELFNEKYGEALGLNRPVLVPYKLIRDSPDAVEVTGLPDDIPFRNPNTYDIHRLEK 862
Query: 81 ILEYTAGISFIIKSSGEP 98
IL+ + +I + +P
Sbjct: 863 ILKAREHVRMVIINQLQP 880
>gi|15011924 GTF2I repeat domain containing 1 isoform 2 [Homo
sapiens]
Length = 944
Score = 66.2 bits (160), Expect = 3e-11
Identities = 35/81 (43%), Positives = 50/81 (61%)
Query: 21 KKTVEDYFCFCCRKALQKPTEVPVPYEKMLQDQSALIVQGLPEGVAFKHPENYDLATLEW 80
+K VE+ F +AL + + VP+PYE++L++ L VQGLPEG+AF+ P YD L
Sbjct: 129 RKMVEEVFDVLYSEALGRASVVPLPYERLLREPGLLAVQGLPEGLAFRRPAEYDPKALMA 188
Query: 81 ILEYTAGISFIIKSSGEPQGR 101
ILE++ I F +K E GR
Sbjct: 189 ILEHSHRIRFKLKRPLEDGGR 209
Score = 50.4 bits (119), Expect = 2e-06
Identities = 29/73 (39%), Positives = 38/73 (52%)
Query: 21 KKTVEDYFCFCCRKALQKPTEVPVPYEKMLQDQSALIVQGLPEGVAFKHPENYDLATLEW 80
+K VE F KA+ V VPY K L L V GLPEG++ + P + +A L
Sbjct: 566 RKQVELLFNTRYAKAIGISEPVKVPYSKFLMHPEELFVVGLPEGISLRRPNCFGIAKLRK 625
Query: 81 ILEYTAGISFIIK 93
ILE + I F+IK
Sbjct: 626 ILEASNSIQFVIK 638
Score = 48.9 bits (115), Expect = 6e-06
Identities = 29/76 (38%), Positives = 41/76 (53%)
Query: 18 NTRKKTVEDYFCFCCRKALQKPTEVPVPYEKMLQDQSALIVQGLPEGVAFKHPENYDLAT 77
NT ++ V+ F +AL VPVPY K+ D A+ + G+P+ + FK P Y +
Sbjct: 349 NTLRECVQILFNSRYAEALGLDHMVPVPYRKIACDPEAVEIVGIPDKIPFKRPCTYGVPK 408
Query: 78 LEWILEYTAGISFIIK 93
L+ ILE I FIIK
Sbjct: 409 LKRILEERHSIHFIIK 424
Score = 43.9 bits (102), Expect = 2e-04
Identities = 24/75 (32%), Positives = 40/75 (53%)
Query: 18 NTRKKTVEDYFCFCCRKALQKPTEVPVPYEKMLQDQSALIVQGLPEGVAFKHPENYDLAT 77
NT ++ V+D F +AL V VPY+++ + ++I++GLP G+ F+ P +
Sbjct: 688 NTLREQVQDLFNKKYGEALGIKYPVQVPYKRIKSNPGSVIIEGLPPGIPFRKPCTFGSQN 747
Query: 78 LEWILEYTAGISFII 92
LE IL I F +
Sbjct: 748 LERILAVADKIKFTV 762
Score = 40.0 bits (92), Expect = 0.003
Identities = 23/78 (29%), Positives = 41/78 (52%)
Query: 21 KKTVEDYFCFCCRKALQKPTEVPVPYEKMLQDQSALIVQGLPEGVAFKHPENYDLATLEW 80
++ V++ F +AL V VPY+ + A+ V GLP+ + F++P YD+ LE
Sbjct: 788 REQVKELFNEKYGEALGLNRPVLVPYKLIRDSPDAVEVTGLPDDIPFRNPNTYDIHRLEK 847
Query: 81 ILEYTAGISFIIKSSGEP 98
IL+ + +I + +P
Sbjct: 848 ILKAREHVRMVIINQLQP 865
>gi|38505170 Ras protein-specific guanine nucleotide-releasing
factor 2 [Homo sapiens]
Length = 1237
Score = 43.1 bits (100), Expect = 3e-04
Identities = 51/180 (28%), Positives = 69/180 (38%), Gaps = 24/180 (13%)
Query: 113 PQLCEGGNLPQSLILAAIHGPEVASLRCQRGPRKSR--AQGGRAVHSATLSGLGPALQPP 170
P+LC + P L ++ P A P S+ A S T + PA PP
Sbjct: 719 PRLCRKFSSPPPLAVSRTSSPVRARKLSLTSPLNSKIGALDLTTSSSPTTTTQSPAASPP 778
Query: 171 PWTQVQLPPEHGTRQRGLQPGPCPCQQQGGYLGQKLPGRLSEGVGPQLQEGGNR--RSAR 228
P T Q+P + RGL ++ PG + E V + N+ RS +
Sbjct: 779 PHTG-QIPLD---LSRGLSSP------------EQSPGTVEENVDNPRVDLCNKLKRSIQ 822
Query: 229 PWRLHGAQYQGPAPGSWVEEGPGAAMSSRPCCREPHTFRSREARQPGSASAAGATCTRCP 288
L A PA + VE P A + CR P T R RQPG +A A C+ P
Sbjct: 823 KAVLESA----PADRAGVESSPAADTTELSPCRSPSTPRHLRYRQPGGQTADNAHCSVSP 878
>gi|37537692 proline-rich protein BstNI subfamily 4 precursor [Homo
sapiens]
Length = 247
Score = 42.7 bits (99), Expect = 4e-04
Identities = 63/242 (26%), Positives = 87/242 (35%), Gaps = 52/242 (21%)
Query: 47 EKMLQDQSALIVQGLPEGVAFKHPENYDLATLEWILEYTAGISFIIKSSGEPQGRTPPLR 106
E + Q++S ++ G PEG + P+ + G+PQG PP
Sbjct: 21 EDVSQEESLFLISGKPEG---RRPQGGNQPQRP------------PPPPGKPQG-PPPQG 64
Query: 107 LNQAVGPQLCEG---GNLPQSLILAAIHGPEVASLRCQRGPRKSRAQGGRAVHSATLSGL 163
NQ+ GP G G PQ + GP + +R P QGG
Sbjct: 65 GNQSQGPPPPPGKPEGRPPQGGNQS--QGPPPHPGKPERPP----PQGGNQSQGTP---- 114
Query: 164 GPALQPPPWTQVQLPPEHGTRQRGLQPGPCPCQQ---QGGYLGQKLPGRLSEGVGPQLQE 220
PPP + PP+ G + P P ++ QGG Q P + GP QE
Sbjct: 115 -----PPPGKPERPPPQGGNQSHRPPPPPGKPERPPPQGGNQSQGPPPHPGKPEGPPPQE 169
Query: 221 GGNRRSAR--------PWRLHGAQYQGPAPGSWVEEGPGAAMSSRPCCREPHTFRSREAR 272
G RSAR P + G + QGP P PG P P ++ A
Sbjct: 170 GNKSRSARSPPGKPQGPPQQEGNKPQGPPP-------PGKPQGPPPAGGNPQQPQAPPAG 222
Query: 273 QP 274
+P
Sbjct: 223 KP 224
>gi|209571537 proline-rich protein BstNI subfamily 2 [Homo sapiens]
Length = 416
Score = 42.4 bits (98), Expect = 5e-04
Identities = 51/172 (29%), Positives = 65/172 (37%), Gaps = 31/172 (18%)
Query: 93 KSSGEPQGRTPPLRLNQAVGPQLCEGGNLPQSLILAAIHGPEVASLRCQRGP-------- 144
+ +PQG PP Q PQ GGN PQ GP +GP
Sbjct: 248 QGGNQPQGPPPPPGKPQGPPPQ---GGNKPQ--------GPPPPGK--PQGPPPQGGSKS 294
Query: 145 RKSRAQGGRAVHSATLSGLGPALQPPPWTQVQ-LPPEHGTRQRGLQP-----GPCPCQQQ 198
R SR+ G+ G P PPP + Q PP+ G + +G P GP P Q
Sbjct: 295 RSSRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPP---Q 351
Query: 199 GGYLGQKLPGRLSEGVGPQLQEGGNRRSARPWRLHGAQYQGPAPGSWVEEGP 250
GG + + GP QEG N + P G Q AP + +GP
Sbjct: 352 GGSKSRSARSPPGKPQGPPQQEGNNPQGPPP-PAGGNPQQPQAPPAGQPQGP 402
Score = 41.2 bits (95), Expect = 0.001
Identities = 57/208 (27%), Positives = 76/208 (36%), Gaps = 31/208 (14%)
Query: 93 KSSGEPQGRTPPLRLNQAVGPQLCEGGNLPQSLILAAIHGPEVASLRCQRGPRKSRAQGG 152
+ +PQG PP Q PQ GGN PQ P+ + R SR+ G
Sbjct: 124 QGGNQPQGPPPPPGKPQGPPPQ---GGNKPQGPPPPG--KPQGPPPQGDNKSRSSRSPPG 178
Query: 153 RAVHSATLSGLGPALQPPPWTQVQ-LPPEHGTRQRGLQP-----GPCPCQQQGGYLGQKL 206
+ G P PPP + Q PP+ G + +G P GP P +
Sbjct: 179 KPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDNKSQSARSP 238
Query: 207 PGRLSEGVGPQLQEGGNRRSARPWRLHGAQYQGPAPGSWVEEGPGAAMSSRPCCREPHTF 266
PG+ +G PQ GGN Q QGP P +GP ++P P
Sbjct: 239 PGK-PQGPPPQ---GGN------------QPQGPPPPPGKPQGPPPQGGNKPQGPPPPGK 282
Query: 267 RSREARQPGSASAAGATCTRCPVERGQG 294
Q GS S + +R P + QG
Sbjct: 283 PQGPPPQGGSKSRS----SRSPPGKPQG 306
Score = 37.4 bits (85), Expect = 0.017
Identities = 50/179 (27%), Positives = 65/179 (36%), Gaps = 42/179 (23%)
Query: 93 KSSGEPQGRTPPLRLNQAVGPQLCEGGNLPQSLILAAIHGPEVASLRCQRGP-------R 145
+ +PQG PP Q PQ GGN PQ GP +GP R
Sbjct: 63 QGGNQPQGPPPPPGKPQGPPPQ---GGNKPQ--------GPPPPGK--PQGPPPQGDKSR 109
Query: 146 KSRAQGGRAVHSATLSGLGPALQPPPWTQVQ-LPPEHGTRQRGLQP-----GPCPCQQQG 199
R+ G+ G P PPP + Q PP+ G + +G P GP P
Sbjct: 110 SPRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDNK 169
Query: 200 GYLGQKLPGRLSEGVGPQLQEGGNRRSARPWRLHGAQYQGPAPGSWVEEGPGAAMSSRP 258
+ PG+ +G PQ GGN Q QGP P +GP ++P
Sbjct: 170 SRSSRSPPGK-PQGPPPQ---GGN------------QPQGPPPPPGKPQGPPPQGGNKP 212
>gi|169210212 PREDICTED: hypothetical protein [Homo sapiens]
Length = 204
Score = 42.0 bits (97), Expect = 7e-04
Identities = 40/132 (30%), Positives = 53/132 (40%), Gaps = 20/132 (15%)
Query: 118 GGNLPQSL---ILAAIHGPEVASLRCQRGPRKSRAQGGRAVHSATLSGLGPALQPPPWTQ 174
GG + Q + + A HG + RC+R PR SR GG + T WT
Sbjct: 63 GGQVLQRIQDGVARAPHGSRIPG-RCRRSPRCSRRPGGSRLRGGT------------WTP 109
Query: 175 VQLPPEHGTRQRGLQPGPCPCQQQGGYLGQKLPGRLSEGVGPQLQEGGNRRSARPWRLHG 234
+LPP +R P CP + L P + G+GPQ GG + A
Sbjct: 110 -RLPPTLVSRLPA--PVRCPPAKGASLLHPWSPPTQASGLGPQ-AVGGRQDRALQLACEV 165
Query: 235 AQYQGPAPGSWV 246
+GP GSWV
Sbjct: 166 GPGRGPQRGSWV 177
>gi|239755981 PREDICTED: hypothetical protein XP_002344766 [Homo
sapiens]
Length = 307
Score = 42.0 bits (97), Expect = 7e-04
Identities = 34/84 (40%), Positives = 44/84 (52%), Gaps = 13/84 (15%)
Query: 209 RLSEGVGPQLQEGGNRRSAR------PWRLHGAQYQGP--AP-GSWVEEGPG--AAMSSR 257
RL+EG G QE G R AR PW + G +GP AP GS GPG +A ++R
Sbjct: 67 RLAEGSGEGKQEEGRRAQARPRPLRPPWEVRGGA-RGPCSAPVGSRASSGPGLPSAAAAR 125
Query: 258 PCCREPHTFRSREARQPGSASAAG 281
P R+ T + R P +AS+AG
Sbjct: 126 P-ARKTLTCQPRSIESPATASSAG 148
>gi|169210418 PREDICTED: hypothetical protein [Homo sapiens]
Length = 204
Score = 42.0 bits (97), Expect = 7e-04
Identities = 40/132 (30%), Positives = 53/132 (40%), Gaps = 20/132 (15%)
Query: 118 GGNLPQSL---ILAAIHGPEVASLRCQRGPRKSRAQGGRAVHSATLSGLGPALQPPPWTQ 174
GG + Q + + A HG + RC+R PR SR GG + T WT
Sbjct: 63 GGQVLQRIQDGVARAPHGSRIPG-RCRRSPRCSRRPGGSRLRGGT------------WTP 109
Query: 175 VQLPPEHGTRQRGLQPGPCPCQQQGGYLGQKLPGRLSEGVGPQLQEGGNRRSARPWRLHG 234
+LPP +R P CP + L P + G+GPQ GG + A
Sbjct: 110 -RLPPTLVSRLPA--PVRCPPAKGASLLHPWSPPTQASGLGPQ-AVGGRQDRALQLACEV 165
Query: 235 AQYQGPAPGSWV 246
+GP GSWV
Sbjct: 166 GPGRGPQRGSWV 177
>gi|239750506 PREDICTED: hypothetical protein XP_002347417 [Homo
sapiens]
Length = 325
Score = 42.0 bits (97), Expect = 7e-04
Identities = 34/84 (40%), Positives = 44/84 (52%), Gaps = 13/84 (15%)
Query: 209 RLSEGVGPQLQEGGNRRSAR------PWRLHGAQYQGP--AP-GSWVEEGPG--AAMSSR 257
RL+EG G QE G R AR PW + G +GP AP GS GPG +A ++R
Sbjct: 85 RLAEGSGEGKQEEGRRAQARPRPLRPPWEVRGGA-RGPCSAPVGSRASSGPGLPSAAAAR 143
Query: 258 PCCREPHTFRSREARQPGSASAAG 281
P R+ T + R P +AS+AG
Sbjct: 144 P-ARKTLTCQPRSIESPATASSAG 166
>gi|169209848 PREDICTED: hypothetical protein [Homo sapiens]
Length = 204
Score = 42.0 bits (97), Expect = 7e-04
Identities = 40/132 (30%), Positives = 53/132 (40%), Gaps = 20/132 (15%)
Query: 118 GGNLPQSL---ILAAIHGPEVASLRCQRGPRKSRAQGGRAVHSATLSGLGPALQPPPWTQ 174
GG + Q + + A HG + RC+R PR SR GG + T WT
Sbjct: 63 GGQVLQRIQDGVARAPHGSRIPG-RCRRSPRCSRRPGGSRLRGGT------------WTP 109
Query: 175 VQLPPEHGTRQRGLQPGPCPCQQQGGYLGQKLPGRLSEGVGPQLQEGGNRRSARPWRLHG 234
+LPP +R P CP + L P + G+GPQ GG + A
Sbjct: 110 -RLPPTLVSRLPA--PVRCPPAKGASLLHPWSPPTQASGLGPQ-AVGGRQDRALQLACEV 165
Query: 235 AQYQGPAPGSWV 246
+GP GSWV
Sbjct: 166 GPGRGPQRGSWV 177
>gi|239744803 PREDICTED: hypothetical protein XP_002343287 [Homo
sapiens]
Length = 325
Score = 42.0 bits (97), Expect = 7e-04
Identities = 34/84 (40%), Positives = 44/84 (52%), Gaps = 13/84 (15%)
Query: 209 RLSEGVGPQLQEGGNRRSAR------PWRLHGAQYQGP--AP-GSWVEEGPG--AAMSSR 257
RL+EG G QE G R AR PW + G +GP AP GS GPG +A ++R
Sbjct: 85 RLAEGSGEGKQEEGRRAQARPRPLRPPWEVRGGA-RGPCSAPVGSRASSGPGLPSAAAAR 143
Query: 258 PCCREPHTFRSREARQPGSASAAG 281
P R+ T + R P +AS+AG
Sbjct: 144 P-ARKTLTCQPRSIESPATASSAG 166
>gi|117306167 proline-rich protein BstNI subfamily 3 precursor [Homo
sapiens]
Length = 309
Score = 40.0 bits (92), Expect = 0.003
Identities = 57/193 (29%), Positives = 71/193 (36%), Gaps = 50/193 (25%)
Query: 96 GEPQGRTPPLRLNQAVGP---------QLCEGGNLPQSLILAAIHGPEVASLRCQRGPRK 146
G+P+G PP NQ+ GP Q +GGN Q GP + + P
Sbjct: 76 GKPEG-PPPQGGNQSQGPPPRPGKPEGQPPQGGNQSQ--------GPPPRPGKPEGPP-- 124
Query: 147 SRAQGGRAVHSATLSGLGPALQPPPWTQVQLPPEHGTRQRGLQP------GPCPCQQQGG 200
QGG GP P P PP+ G + +G P GP P QGG
Sbjct: 125 --PQGGN-------QSQGPP--PRPGKPEGPPPQGGNQSQGPPPRPGKPEGPPP---QGG 170
Query: 201 YLGQKLPGRLSEGVGPQLQEGGNRRSARPWR---------LHGAQYQGPAPGSWVEEGPG 251
Q P + GP Q GGN+ P R G Q QGP P EGP
Sbjct: 171 NQSQGPPPHPGKPEGPPPQ-GGNQSQGPPPRPGKPEGPPPQGGNQSQGPPPRPGKPEGPP 229
Query: 252 AAMSSRPCCREPH 264
+ ++P PH
Sbjct: 230 SQGGNKPQGPPPH 242
Score = 36.6 bits (83), Expect = 0.028
Identities = 33/97 (34%), Positives = 39/97 (40%), Gaps = 19/97 (19%)
Query: 169 PPPWTQVQLPPEHGTRQRGLQP------GPCPCQQQGGYLGQKLPGRLSEGVGPQLQEGG 222
PPP PP+ G + +G P GP P QGG Q P R + G Q +GG
Sbjct: 52 PPPGKPEGRPPQGGNQSQGPPPRPGKPEGPPP---QGGNQSQGPPPRPGKPEG-QPPQGG 107
Query: 223 NRRSARPWR---------LHGAQYQGPAPGSWVEEGP 250
N+ P R G Q QGP P EGP
Sbjct: 108 NQSQGPPPRPGKPEGPPPQGGNQSQGPPPRPGKPEGP 144
Score = 30.4 bits (67), Expect = 2.0
Identities = 38/128 (29%), Positives = 44/128 (34%), Gaps = 35/128 (27%)
Query: 96 GEPQGRTPPLRLNQAVGPQLCEGGNLPQSLILAAIHGPEVASLRCQRGPRKSRAQGGRAV 155
G Q + PP R + GP +GGN PQ GP P + QG
Sbjct: 211 GGNQSQGPPPRPGKPEGPP-SQGGNKPQ--------GPP---------PHPGKPQG---- 248
Query: 156 HSATLSGLGPALQPPPWTQVQLPPEHGTRQRGLQP------GPCPCQQQGGYLGQKLPGR 209
G P PPP PP G Q+ L P GP P Q G P R
Sbjct: 249 -PPPQEGNKPQRPPPPGRPQGPPPPGGNPQQPLPPPAGKPQGPPPPPQGG------RPHR 301
Query: 210 LSEGVGPQ 217
+G PQ
Sbjct: 302 PPQGQPPQ 309
>gi|41349482 proline-rich protein BstNI subfamily 1 isoform 1
preproprotein [Homo sapiens]
Length = 331
Score = 39.3 bits (90), Expect = 0.004
Identities = 48/168 (28%), Positives = 60/168 (35%), Gaps = 24/168 (14%)
Query: 93 KSSGEPQGRTPPLRLNQAVGPQLCEGGNLPQSLILAAIHGPEVASLRCQRGP-------R 145
+ +PQG PP Q PQ GG PQ GP +GP R
Sbjct: 164 QGGNQPQGPPPPPGKPQGPPPQ---GGKKPQ--------GPPPPGK--PQGPPPQGDKSR 210
Query: 146 KSRAQGGRAVHSATLSGLGPALQPPPWTQVQLPPEHGTRQRGLQPGPCPCQ---QQGGYL 202
S++ G+ G P PPP + Q PP G + P P Q QGG
Sbjct: 211 SSQSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPAQGGSK 270
Query: 203 GQKLPGRLSEGVGPQLQEGGNRRSARPWRLHGAQYQGPAPGSWVEEGP 250
Q + GP QEG N + P G Q AP + +GP
Sbjct: 271 SQSARSPPGKPQGPPQQEGNNPQGPPP-PAGGNPQQPQAPPAGQPQGP 317
Score = 38.1 bits (87), Expect = 0.010
Identities = 59/214 (27%), Positives = 74/214 (34%), Gaps = 45/214 (21%)
Query: 93 KSSGEPQGRTPPLRLNQAVGPQLCEGGNLPQSLILAAIHGPEVASLRCQRGP-------R 145
+ +PQG PP Q PQ GGN PQ GP +GP R
Sbjct: 103 QGGNQPQGPPPPPGKPQGPPPQ---GGNRPQ--------GPPPPGK--PQGPPPQGDKSR 149
Query: 146 KSRAQGGRAVHSATLSGLGPALQPPPWTQVQLPPEHGTRQRGLQPGP-----CPCQQQGG 200
R+ G+ G P PPP + Q PP G ++ P P P Q
Sbjct: 150 SPRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGKKPQGPPPPGKPQGPPPQGDKS 209
Query: 201 YLGQKLPGRLSEGVGPQLQEGGNRRSARPWRLHGAQYQGPAPGSWVEEGPGAAMSSRPCC 260
Q PG+ +G PQ GGN Q QGP P +GP ++P
Sbjct: 210 RSSQSPPGK-PQGPPPQ---GGN------------QPQGPPPPPGKPQGPPPQGGNKPQG 253
Query: 261 REPHTFRSREARQPGSASAAGATCTRCPVERGQG 294
P Q GS S + R P + QG
Sbjct: 254 PPPPGKPQGPPAQGGSKSQS----ARSPPGKPQG 283
Score = 36.2 bits (82), Expect = 0.037
Identities = 57/196 (29%), Positives = 75/196 (38%), Gaps = 36/196 (18%)
Query: 93 KSSGEPQGRTPPLRLNQAVGPQLCEGGNLPQSLILAAIHGPEVASLRCQRGP-------R 145
+ +PQG PP Q PQ GGN PQ GP +GP R
Sbjct: 42 QGGNKPQGPPPPPGKPQGPPPQ---GGNKPQ--------GPPPPGK--PQGPPPQGDKSR 88
Query: 146 KSRAQGGRAVHSATLSGLGPALQPPPWTQVQ-LPPEHGTRQRGLQP-----GPCPCQQQG 199
R+ G+ G P PPP + Q PP+ G R +G P GP P Q
Sbjct: 89 SPRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNRPQGPPPPGKPQGP-PPQGDK 147
Query: 200 GYLGQKLPGRLSEGVGPQLQEGGNRRSARPWRLHGAQYQGPAP-GSWVEEGPGAAMSSRP 258
+ PG+ +G PQ GGN+ P + QGP P G +GP +P
Sbjct: 148 SRSPRSPPGK-PQGPPPQ---GGNQPQGPP--PPPGKPQGPPPQGGKKPQGP--PPPGKP 199
Query: 259 CCREPHTFRSREARQP 274
P +SR ++ P
Sbjct: 200 QGPPPQGDKSRSSQSP 215
>gi|32698936 B-cell CLL/lymphoma 9-like [Homo sapiens]
Length = 1499
Score = 38.9 bits (89), Expect = 0.006
Identities = 36/126 (28%), Positives = 52/126 (41%), Gaps = 13/126 (10%)
Query: 104 PLRLNQAVGPQLCEGGNLPQSLILAAIHGPEVASLRCQRGPRKSR--------AQGGRAV 155
PL N + P G PQ+ ++ A GP+ + C P S+ Q A+
Sbjct: 1180 PLGSNIPLHPNAQGTGGPPQNSMMMAPGGPDSLNAPCGPVPSSSQMMPFPPRLQQPHGAM 1239
Query: 156 HSATLSGLGPALQPPPWTQVQLPPEHGTRQRGLQPGPCPCQQQGGYLGQKLPGRLSEGVG 215
G GP LQ + + LPPE Q PGP P QQ +G+ + GR+ +
Sbjct: 1240 APTGGGGGGPGLQQHYPSGMALPPEDLPNQ---PPGPMPPQQH--LMGKAMAGRMGDAYP 1294
Query: 216 PQLQEG 221
P + G
Sbjct: 1295 PGVLPG 1300
>gi|239746530 PREDICTED: hypothetical protein XP_002343754 [Homo
sapiens]
Length = 536
Score = 36.2 bits (82), Expect = 0.037
Identities = 39/121 (32%), Positives = 49/121 (40%), Gaps = 7/121 (5%)
Query: 179 PEHGTRQ--RGLQP--GPCPCQQQGGYLGQKLPGRLSEGVGPQLQEGGNRRSARPWRLHG 234
P H R RG +P G +Q + + P + +G PQ R R WR HG
Sbjct: 129 PRHRPRALGRGRRPLRGRVLLRQLDPFTRPRFPLQFFQGC-PQPSRCLGRLEPRRWRGHG 187
Query: 235 AQYQGP-APGSWVEEGPGAAMSSRPCCREPHT-FRSREARQPGSASAAGATCTRCPVERG 292
Q G APG V PG A + R+PH R + G A AAG C RG
Sbjct: 188 LQPGGARAPGLQVPAPPGPASPAPLPARQPHKGVRPLGCCRGGRAQAAGQPRGLCLPGRG 247
Query: 293 Q 293
+
Sbjct: 248 R 248
>gi|4826998 splicing factor proline/glutamine rich (polypyrimidine
tract binding protein associated) [Homo sapiens]
Length = 707
Score = 36.2 bits (82), Expect = 0.037
Identities = 43/150 (28%), Positives = 49/150 (32%), Gaps = 40/150 (26%)
Query: 161 SGLGPALQPPP-------WTQVQLPPEHGTRQRGLQ-----------PGPCPCQQQG--- 199
SG GP PPP PP G Q PGP P +QG
Sbjct: 145 SGPGPTPTPPPAVTSAPPGAPPPTPPSSGVPTTPPQAGGPPPPPAAVPGPGPGPKQGPGP 204
Query: 200 -GYLGQKLPGRLSEGVGPQL-----------QEGGNRRSARPWR--LHGAQYQGPAPGSW 245
G G K+PG G GP L + GG R R H +QGP PG
Sbjct: 205 GGPKGGKMPGGPKPGGGPGLSTPGGHPKPPHRGGGEPRGGRQHHPPYHQQHHQGPPPG-- 262
Query: 246 VEEGPGAAMSSRPCCREPHTFRSREARQPG 275
GPG + E R+PG
Sbjct: 263 ---GPGGRSEEKISDSEGFKANLSLLRRPG 289
>gi|41349484 proline-rich protein BstNI subfamily 1 isoform 2
preproprotein [Homo sapiens]
Length = 198
Score = 36.2 bits (82), Expect = 0.037
Identities = 46/161 (28%), Positives = 58/161 (36%), Gaps = 21/161 (13%)
Query: 93 KSSGEPQGRTPPLRLNQAVGPQLCEGGNLPQSLILAAIHGPEVASLRCQRGPRKSRAQGG 152
+ +PQG PP Q PQ GGN PQ GP P+ QG
Sbjct: 42 QGGNKPQGPPPPPGKPQGPPPQ---GGNKPQ--------GPPPPGK-----PQGPPPQGD 85
Query: 153 RAVHSATLSGLGPALQPPPWTQVQLPPEHGTRQRGLQPGPCPCQ---QQGGYLGQKLPGR 209
++ + G P PP + Q PP G + P P Q QGG Q
Sbjct: 86 KSRSPRSPPGK-PQGPPPQGGKPQGPPPQGGNKPQGPPPPGKPQGPPAQGGSKSQSARSP 144
Query: 210 LSEGVGPQLQEGGNRRSARPWRLHGAQYQGPAPGSWVEEGP 250
+ GP QEG N + P G Q AP + +GP
Sbjct: 145 PGKPQGPPQQEGNNPQGPPP-PAGGNPQQPQAPPAGQPQGP 184
>gi|239754606 PREDICTED: similar to hCG1983816 [Homo sapiens]
Length = 298
Score = 35.8 bits (81), Expect = 0.048
Identities = 17/38 (44%), Positives = 24/38 (63%)
Query: 56 LIVQGLPEGVAFKHPENYDLATLEWILEYTAGISFIIK 93
L V GLPEG++ + P + +A L ILE + I F+IK
Sbjct: 6 LFVVGLPEGISLRRPNCFGIAKLWKILEASNSIQFVIK 43
Score = 35.4 bits (80), Expect = 0.063
Identities = 22/75 (29%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 18 NTRKKTVEDYFCFCCRKALQKPTEVPVPYEKMLQDQSALIVQGLPEGVAFKHPENYDLAT 77
NT ++ V++ F +AL V VPY+ + + ++I++ LP G+ F+ P +
Sbjct: 108 NTLREQVQELFNKTYGEALGIKYPVQVPYKWIKSNPGSMIIEELPPGILFRKP--FGSQN 165
Query: 78 LEWILEYTAGISFII 92
LE IL I+F +
Sbjct: 166 LERILAMANKITFTV 180
>gi|239749152 PREDICTED: similar to hCG1983816 [Homo sapiens]
Length = 265
Score = 35.8 bits (81), Expect = 0.048
Identities = 17/38 (44%), Positives = 24/38 (63%)
Query: 56 LIVQGLPEGVAFKHPENYDLATLEWILEYTAGISFIIK 93
L V GLPEG++ + P + +A L ILE + I F+IK
Sbjct: 6 LFVVGLPEGISLRRPNCFGIAKLWKILEASNSIQFVIK 43
Score = 35.4 bits (80), Expect = 0.063
Identities = 22/75 (29%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 18 NTRKKTVEDYFCFCCRKALQKPTEVPVPYEKMLQDQSALIVQGLPEGVAFKHPENYDLAT 77
NT ++ V++ F +AL V VPY+ + + ++I++ LP G+ F+ P +
Sbjct: 108 NTLREQVQELFNKTYGEALGIKYPVQVPYKWIKSNPGSMIIEELPPGILFRKP--FGSQN 165
Query: 78 LEWILEYTAGISFII 92
LE IL I+F +
Sbjct: 166 LERILAMANKITFTV 180
>gi|239508897 PREDICTED: similar to hCG1983816 [Homo sapiens]
Length = 265
Score = 35.8 bits (81), Expect = 0.048
Identities = 17/38 (44%), Positives = 24/38 (63%)
Query: 56 LIVQGLPEGVAFKHPENYDLATLEWILEYTAGISFIIK 93
L V GLPEG++ + P + +A L ILE + I F+IK
Sbjct: 6 LFVVGLPEGISLRRPNCFGIAKLWKILEASNSIQFVIK 43
Score = 35.4 bits (80), Expect = 0.063
Identities = 22/75 (29%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 18 NTRKKTVEDYFCFCCRKALQKPTEVPVPYEKMLQDQSALIVQGLPEGVAFKHPENYDLAT 77
NT ++ V++ F +AL V VPY+ + + ++I++ LP G+ F+ P +
Sbjct: 108 NTLREQVQELFNKTYGEALGIKYPVQVPYKWIKSNPGSMIIEELPPGILFRKP--FGSQN 165
Query: 78 LEWILEYTAGISFII 92
LE IL I+F +
Sbjct: 166 LERILAMANKITFTV 180
>gi|239756441 PREDICTED: hypothetical protein LOC388199 [Homo
sapiens]
Length = 373
Score = 35.4 bits (80), Expect = 0.063
Identities = 42/150 (28%), Positives = 56/150 (37%), Gaps = 16/150 (10%)
Query: 84 YTAGISFIIKSSGEPQGRTPPLRLNQAVGPQLCEGGNLPQSLILAAIHGPEVASLRCQRG 143
+ AG F+ S+ P GR P +++ LP S A V ++ G
Sbjct: 65 WAAGTHFLAIST-TPWGRKTPACISE-----------LPTSSGTAQPLANAVCEVQTVPG 112
Query: 144 PRKSRAQGGRAVHSATLSGLGPALQPPPWTQVQLPPEHGTRQRGLQPGPCPCQQQGGYLG 203
P R QG A+ + + G P P PW Q H ++G+ GP P G
Sbjct: 113 PGL-RPQGTPAMRAPSHKGTPPT--PNPWGPEQPQNRHKHPKKGVTGGPSPPPPAASRYG 169
Query: 204 QKLPGRLSEGVGPQLQEGGNRRSARPWRLH 233
Q PGR P L G S R LH
Sbjct: 170 Q-TPGREPRVQAPGLGPCGRPASGRLLSLH 198
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.136 0.439
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,973,668
Number of Sequences: 37866
Number of extensions: 951683
Number of successful extensions: 3610
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 157
Number of HSP's that attempted gapping in prelim test: 3420
Number of HSP's gapped (non-prelim): 314
length of query: 304
length of database: 18,247,518
effective HSP length: 102
effective length of query: 202
effective length of database: 14,385,186
effective search space: 2905807572
effective search space used: 2905807572
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.