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Search of human proteins with 239756268
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239756268 PREDICTED: hypothetical protein XP_002344877 [Homo
sapiens]
(252 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239756268 PREDICTED: hypothetical protein XP_002344877 [Homo ... 521 e-148
gi|239745177 PREDICTED: hypothetical protein XP_002343381 [Homo ... 518 e-147
gi|239749199 PREDICTED: hypothetical protein XP_002346952 [Homo ... 43 2e-04
gi|239753314 PREDICTED: similar to RIKEN cDNA C230030N03 [Homo s... 42 7e-04
gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi... 42 7e-04
gi|210032509 hypothetical protein LOC100130302 [Homo sapiens] 41 9e-04
gi|239754657 PREDICTED: hypothetical protein XP_002346062 [Homo ... 41 0.001
gi|239743279 PREDICTED: hypothetical protein XP_002342816 [Homo ... 41 0.001
gi|239508962 PREDICTED: hypothetical protein [Homo sapiens] 41 0.001
gi|156071470 hyperpolarization activated cyclic nucleotide-gated... 40 0.002
gi|222418604 hypothetical protein LOC257407 [Homo sapiens] 40 0.002
gi|239756899 PREDICTED: hypothetical protein [Homo sapiens] 39 0.003
gi|113427491 PREDICTED: hypothetical protein [Homo sapiens] 39 0.003
gi|239745902 PREDICTED: hypothetical protein [Homo sapiens] 39 0.003
gi|30089966 CDC42 effector protein 5 [Homo sapiens] 39 0.003
gi|112382270 matrix metalloproteinase 17 preproprotein [Homo sap... 39 0.004
gi|238908524 hypothetical protein LOC389333 [Homo sapiens] 39 0.006
gi|169204821 PREDICTED: hypothetical protein [Homo sapiens] 39 0.006
gi|239753839 PREDICTED: hypothetical protein [Homo sapiens] 39 0.006
gi|169205432 PREDICTED: hypothetical protein [Homo sapiens] 39 0.006
gi|169204105 PREDICTED: hypothetical protein [Homo sapiens] 39 0.006
gi|4507869 vasodilator-stimulated phosphoprotein [Homo sapiens] 38 0.007
gi|239754674 PREDICTED: hypothetical protein [Homo sapiens] 38 0.007
gi|169163728 PREDICTED: hypothetical protein [Homo sapiens] 38 0.007
gi|169163708 PREDICTED: hypothetical protein [Homo sapiens] 38 0.007
gi|169163019 PREDICTED: hypothetical protein [Homo sapiens] 38 0.007
gi|239753673 PREDICTED: hypothetical protein [Homo sapiens] 38 0.010
gi|169216507 PREDICTED: similar to hCG1645335 [Homo sapiens] 38 0.010
gi|239750101 PREDICTED: hypothetical protein [Homo sapiens] 38 0.010
gi|169216732 PREDICTED: similar to hCG1645335 [Homo sapiens] 38 0.010
>gi|239756268 PREDICTED: hypothetical protein XP_002344877 [Homo
sapiens]
Length = 252
Score = 521 bits (1342), Expect = e-148
Identities = 252/252 (100%), Positives = 252/252 (100%)
Query: 1 MPFNLPGFQNSQGNQSASVPGRSSLLPPHQNPPPIHLAPEGQNGVLKLTGRGRFRPPGKT 60
MPFNLPGFQNSQGNQSASVPGRSSLLPPHQNPPPIHLAPEGQNGVLKLTGRGRFRPPGKT
Sbjct: 1 MPFNLPGFQNSQGNQSASVPGRSSLLPPHQNPPPIHLAPEGQNGVLKLTGRGRFRPPGKT 60
Query: 61 IELLDLQAQTVHEMLVKLEAEKKGWVGHKHWKSWVDPARRLLSPCRAGGNRAYGRELLQV 120
IELLDLQAQTVHEMLVKLEAEKKGWVGHKHWKSWVDPARRLLSPCRAGGNRAYGRELLQV
Sbjct: 61 IELLDLQAQTVHEMLVKLEAEKKGWVGHKHWKSWVDPARRLLSPCRAGGNRAYGRELLQV 120
Query: 121 AEVWRIRQREAGAARAARAPKPPAPGSGQALPADPLLQAAASTLAGRPRAPPPAPAAGQR 180
AEVWRIRQREAGAARAARAPKPPAPGSGQALPADPLLQAAASTLAGRPRAPPPAPAAGQR
Sbjct: 121 AEVWRIRQREAGAARAARAPKPPAPGSGQALPADPLLQAAASTLAGRPRAPPPAPAAGQR 180
Query: 181 GLGSGALGLGRREKLAARPAATPRRASRPPWQGCRGARGLGGGRGPLREDAAALLPQEVQ 240
GLGSGALGLGRREKLAARPAATPRRASRPPWQGCRGARGLGGGRGPLREDAAALLPQEVQ
Sbjct: 181 GLGSGALGLGRREKLAARPAATPRRASRPPWQGCRGARGLGGGRGPLREDAAALLPQEVQ 240
Query: 241 QERYEFFPQGPE 252
QERYEFFPQGPE
Sbjct: 241 QERYEFFPQGPE 252
>gi|239745177 PREDICTED: hypothetical protein XP_002343381 [Homo
sapiens]
Length = 252
Score = 518 bits (1335), Expect = e-147
Identities = 251/252 (99%), Positives = 251/252 (99%)
Query: 1 MPFNLPGFQNSQGNQSASVPGRSSLLPPHQNPPPIHLAPEGQNGVLKLTGRGRFRPPGKT 60
MPFNLPGFQNSQGNQSASVPGRSSLLPPHQNPPPIHLAPEGQNGVLKLTGRGRFRPPGKT
Sbjct: 1 MPFNLPGFQNSQGNQSASVPGRSSLLPPHQNPPPIHLAPEGQNGVLKLTGRGRFRPPGKT 60
Query: 61 IELLDLQAQTVHEMLVKLEAEKKGWVGHKHWKSWVDPARRLLSPCRAGGNRAYGRELLQV 120
IELLDLQAQTVHEMLVKLEAEKKGWVGHKHWKSWVDPARRLLSPCRAGGNRAYGRELLQV
Sbjct: 61 IELLDLQAQTVHEMLVKLEAEKKGWVGHKHWKSWVDPARRLLSPCRAGGNRAYGRELLQV 120
Query: 121 AEVWRIRQREAGAARAARAPKPPAPGSGQALPADPLLQAAASTLAGRPRAPPPAPAAGQR 180
AEVWRIRQREAGAA AARAPKPPAPGSGQALPADPLLQAAASTLAGRPRAPPPAPAAGQR
Sbjct: 121 AEVWRIRQREAGAAGAARAPKPPAPGSGQALPADPLLQAAASTLAGRPRAPPPAPAAGQR 180
Query: 181 GLGSGALGLGRREKLAARPAATPRRASRPPWQGCRGARGLGGGRGPLREDAAALLPQEVQ 240
GLGSGALGLGRREKLAARPAATPRRASRPPWQGCRGARGLGGGRGPLREDAAALLPQEVQ
Sbjct: 181 GLGSGALGLGRREKLAARPAATPRRASRPPWQGCRGARGLGGGRGPLREDAAALLPQEVQ 240
Query: 241 QERYEFFPQGPE 252
QERYEFFPQGPE
Sbjct: 241 QERYEFFPQGPE 252
>gi|239749199 PREDICTED: hypothetical protein XP_002346952 [Homo
sapiens]
Length = 209
Score = 43.1 bits (100), Expect = 2e-04
Identities = 37/104 (35%), Positives = 47/104 (45%), Gaps = 15/104 (14%)
Query: 125 RIRQREAGAARAARAPKP-PAPGSGQALPADPLLQAAASTLAGRPRAPPPAPAAGQRGLG 183
R Q ++G+ AP P P S +A PA QAAA T GR + P G RG G
Sbjct: 109 RPSQHQSGSRLRPAAPGPRPGCSSARASPAPAAPQAAARTAPGRAASGGSGP--GSRGQG 166
Query: 184 SGALGLGRREKLAARP--------AATPRRASRP---PWQGCRG 216
S +G R + +P A PRR++RP P CRG
Sbjct: 167 SDQVG-ARPSRAGGQPPPLTCRRCRAAPRRSARPFRRPGLPCRG 209
>gi|239753314 PREDICTED: similar to RIKEN cDNA C230030N03 [Homo
sapiens]
Length = 1183
Score = 41.6 bits (96), Expect = 7e-04
Identities = 43/149 (28%), Positives = 60/149 (40%), Gaps = 21/149 (14%)
Query: 103 SPCRAGGNRAYGRELLQVAEVWRIRQREAGAARAARAPKPP---------APGSGQALPA 153
+P + G+ A R + Q AE+ R+ +A + +PP + GSG+ P
Sbjct: 624 APIQGAGDGALQR-VAQAAELGRVLVPQAASEETPSTEEPPGERLRGESRSSGSGERGPE 682
Query: 154 DPLLQAAASTLAGRPRAPPPAPAAGQRGLGSGALGLGRREKLA-------ARPAAT--PR 204
+ AA+ RPR P P RGL GA G+R + RP AT P
Sbjct: 683 EAPEGGAAAARGQRPRVPALEPPQPPRGLRKGAQEPGKRPTFSKVTSFRKGRPLATESPG 742
Query: 205 RASRPPWQGCRGARGLGGGRGPLREDAAA 233
P +G R G G G RE+ A
Sbjct: 743 GVPAPTTEGRRW--GSSGPEGLPRENPPA 769
Score = 32.7 bits (73), Expect = 0.31
Identities = 49/171 (28%), Positives = 55/171 (32%), Gaps = 42/171 (24%)
Query: 97 PARRLLSPCRAGGNRAYGRELLQVAEVWRIRQREAGAARAAR----APKPPAPGSGQALP 152
P RL R+ G+ G E + A AAR R A +PP P G
Sbjct: 663 PGERLRGESRSSGSGERGPE--------EAPEGGAAAARGQRPRVPALEPPQPPRGLRKG 714
Query: 153 AD-----PLLQAAASTLAGRPRAPP-----PAPAA-GQRGLGSGALGLGRREKLAAR--- 198
A P S GRP A PAP G+R SG GL R AA
Sbjct: 715 AQEPGKRPTFSKVTSFRKGRPLATESPGGVPAPTTEGRRWGSSGPEGLPRENPPAAAGRD 774
Query: 199 ----------------PAATPRRASRPPWQGCRGARGLGGGRGPLREDAAA 233
P A R + P G G G G RGP E A
Sbjct: 775 APPLHHGDASAWPEFVPQAAGDRTAGPAGAGHTGTSGDLGSRGPSSESCNA 825
>gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo
sapiens]
Length = 816
Score = 41.6 bits (96), Expect = 7e-04
Identities = 40/106 (37%), Positives = 46/106 (43%), Gaps = 30/106 (28%)
Query: 127 RQREAGAARAARAPKPPAPGSGQALPADPLLQAAASTLAGRPRAPPPAPAAGQRGLGS-G 185
++ +A A AAR P APG P P G PR PPP A R LG+ G
Sbjct: 4 KRDKAKAGAAARTPAARAPGL--LTPRPP----------GSPRPPPPVTPAALRVLGAAG 51
Query: 186 ALGLGRREKLAAR-------------PAATPRRASRPPWQGCRGAR 218
A+G R+ LA R P A P R SRPP G RG R
Sbjct: 52 AVG---RKPLAERAGGIGGATIPESAPRAGPTRTSRPPASG-RGER 93
Score = 29.3 bits (64), Expect = 3.4
Identities = 61/268 (22%), Positives = 89/268 (33%), Gaps = 47/268 (17%)
Query: 21 GRSSLLPPHQNPPPIHLAPEGQNGVLKLTGRGRFRPPGKTIELLDLQAQTVHEMLVKLEA 80
GR PP +N P ++ G+ G RP + L + A+ EA
Sbjct: 89 GRGERAPPAKNTSPGPVSSPGR-------ASGTTRPGPLGQKGLRISAEETVARGKATEA 141
Query: 81 EKKGWVGHKHWKSWVDPARRLLSPCRAGGNRAYGRE--LLQVAEVWRIRQREAGAARAAR 138
K+ + + P SP A +RA G E L + A R R G ++
Sbjct: 142 PKRSALSAGARRDTSGPTPGTPSPAMARRSRAAGTEVGLPRPAPSARPRPPTEGPRKSVS 201
Query: 139 A--------PKP-----PAPGSGQALPADPLLQAAASTLA----------GRPRAPPPAP 175
+ P P P+ G G PA L ++A+ L+ G PRAP
Sbjct: 202 SASEHSTTEPSPAARRRPSAGGGLQRPASRSLSSSATPLSSPARSGPSARGTPRAPAHPS 261
Query: 176 AAGQRGLGS------------GALGLGRREKLAARPAATPRRASRPPWQGCRGARGLGGG 223
+GL + A LG L++ P ATP ++ P + L
Sbjct: 262 QPKPKGLQALRPPQVTPPRKDAAPALG---PLSSSPLATPSPSAPPSPSAPPSLQTLPSP 318
Query: 224 RGPLREDAAALLPQEVQQERYEFFPQGP 251
A L Q + F P P
Sbjct: 319 PATPPSQATTSLGSPTLQATHSFLPSPP 346
>gi|210032509 hypothetical protein LOC100130302 [Homo sapiens]
Length = 887
Score = 41.2 bits (95), Expect = 9e-04
Identities = 28/79 (35%), Positives = 34/79 (43%)
Query: 131 AGAARAARAPKPPAPGSGQALPADPLLQAAASTLAGRPRAPPPAPAAGQRGLGSGALGLG 190
A AA AA A AP A A P L AAA+ AP PAPAA + A
Sbjct: 504 AAAAAAAAAAAAAAPAPALAAAAAPALAAAAAPALAAAAAPAPAPAAAPAVAAAPAAAAS 563
Query: 191 RREKLAARPAATPRRASRP 209
+ +P+ +ASRP
Sbjct: 564 AAPSHSQKPSVPLIQASRP 582
>gi|239754657 PREDICTED: hypothetical protein XP_002346062 [Homo
sapiens]
Length = 384
Score = 40.8 bits (94), Expect = 0.001
Identities = 43/126 (34%), Positives = 53/126 (42%), Gaps = 29/126 (23%)
Query: 125 RIRQREAGAARAARAPKP-PAPGSGQALPADPLLQAAASTLAGRPRAPPPAPAAGQRGLG 183
R Q ++G+ AP P P S +A PA QAAA T GR + P G RG G
Sbjct: 109 RPSQHQSGSRLRPAAPGPRPGCSSARASPAPAAPQAAARTAPGRAASGGSGP--GSRGQG 166
Query: 184 SGALGLGRREKLAARP--------AATPRRASRP-----------PWQGCRGAR-----G 219
S +G R + +P A PRR++RP P G GAR G
Sbjct: 167 SDQVG-ARPSRAGGQPPPLTCRRCRAAPRRSARPFRRPGLPLKSRPGSG-TGARSCGTWG 224
Query: 220 LGGGRG 225
GGG G
Sbjct: 225 SGGGPG 230
Score = 31.6 bits (70), Expect = 0.69
Identities = 33/117 (28%), Positives = 42/117 (35%), Gaps = 6/117 (5%)
Query: 134 ARAARAPKPPAPGSGQALPADPLLQAAASTLAGRPRAPPPAPAAGQRGLGSGALGLGRRE 193
AR +RA P P + + A P A G P P G R G+ G G
Sbjct: 172 ARPSRAGGQPPPLTCRRCRAAPRRSARPFRRPGLPLKSRPGSGTGARSCGTWGSGGGPGT 231
Query: 194 KLAARPAATPRRASRPP---WQGCRGARGLGGGR---GPLREDAAALLPQEVQQERY 244
A+ P+A S P + G RG GG R G + LL + RY
Sbjct: 232 AAASSPSADFSSDSPQPIIIFGGALRVRGCGGRRRSNGQGTQPGCRLLSPAPPRRRY 288
>gi|239743279 PREDICTED: hypothetical protein XP_002342816 [Homo
sapiens]
Length = 384
Score = 40.8 bits (94), Expect = 0.001
Identities = 43/126 (34%), Positives = 53/126 (42%), Gaps = 29/126 (23%)
Query: 125 RIRQREAGAARAARAPKP-PAPGSGQALPADPLLQAAASTLAGRPRAPPPAPAAGQRGLG 183
R Q ++G+ AP P P S +A PA QAAA T GR + P G RG G
Sbjct: 109 RPSQHQSGSRLRPAAPGPRPGCSSARASPAPAAPQAAARTAPGRAASGGSGP--GSRGQG 166
Query: 184 SGALGLGRREKLAARP--------AATPRRASRP-----------PWQGCRGAR-----G 219
S +G R + +P A PRR++RP P G GAR G
Sbjct: 167 SDQVG-ARPSRAGGQPPPLTCRRCRAAPRRSARPFRRPGLPLKSRPGSG-TGARSCGTWG 224
Query: 220 LGGGRG 225
GGG G
Sbjct: 225 SGGGPG 230
Score = 31.6 bits (70), Expect = 0.69
Identities = 33/117 (28%), Positives = 42/117 (35%), Gaps = 6/117 (5%)
Query: 134 ARAARAPKPPAPGSGQALPADPLLQAAASTLAGRPRAPPPAPAAGQRGLGSGALGLGRRE 193
AR +RA P P + + A P A G P P G R G+ G G
Sbjct: 172 ARPSRAGGQPPPLTCRRCRAAPRRSARPFRRPGLPLKSRPGSGTGARSCGTWGSGGGPGT 231
Query: 194 KLAARPAATPRRASRPP---WQGCRGARGLGGGR---GPLREDAAALLPQEVQQERY 244
A+ P+A S P + G RG GG R G + LL + RY
Sbjct: 232 AAASSPSADFSSDSPQPIIIFGGALRVRGCGGRRRSNGQGTQPGCRLLSPAPPRRRY 288
>gi|239508962 PREDICTED: hypothetical protein [Homo sapiens]
Length = 384
Score = 40.8 bits (94), Expect = 0.001
Identities = 43/126 (34%), Positives = 53/126 (42%), Gaps = 29/126 (23%)
Query: 125 RIRQREAGAARAARAPKP-PAPGSGQALPADPLLQAAASTLAGRPRAPPPAPAAGQRGLG 183
R Q ++G+ AP P P S +A PA QAAA T GR + P G RG G
Sbjct: 109 RPSQHQSGSRLRPAAPGPRPGCSSARASPAPAAPQAAARTAPGRAASGGSGP--GSRGQG 166
Query: 184 SGALGLGRREKLAARP--------AATPRRASRP-----------PWQGCRGAR-----G 219
S +G R + +P A PRR++RP P G GAR G
Sbjct: 167 SDQVG-ARPSRAGGQPPPLTCRRCRAAPRRSARPFRRPGLPLKSRPGSG-TGARSCGTWG 224
Query: 220 LGGGRG 225
GGG G
Sbjct: 225 SGGGPG 230
Score = 31.6 bits (70), Expect = 0.69
Identities = 33/117 (28%), Positives = 42/117 (35%), Gaps = 6/117 (5%)
Query: 134 ARAARAPKPPAPGSGQALPADPLLQAAASTLAGRPRAPPPAPAAGQRGLGSGALGLGRRE 193
AR +RA P P + + A P A G P P G R G+ G G
Sbjct: 172 ARPSRAGGQPPPLTCRRCRAAPRRSARPFRRPGLPLKSRPGSGTGARSCGTWGSGGGPGT 231
Query: 194 KLAARPAATPRRASRPP---WQGCRGARGLGGGR---GPLREDAAALLPQEVQQERY 244
A+ P+A S P + G RG GG R G + LL + RY
Sbjct: 232 AAASSPSADFSSDSPQPIIIFGGALRVRGCGGRRRSNGQGTQPGCRLLSPAPPRRRY 288
>gi|156071470 hyperpolarization activated cyclic nucleotide-gated
potassium channel 2 [Homo sapiens]
Length = 889
Score = 40.0 bits (92), Expect = 0.002
Identities = 27/84 (32%), Positives = 34/84 (40%), Gaps = 1/84 (1%)
Query: 126 IRQREAGAARAARAPKPPAPGSGQALPADPLLQAAASTLAGRPRAPPPAPAAGQRGLGSG 185
+R+ G A AA +P PP P S PA P S G P AP PA R L
Sbjct: 758 VRRPPPGPAPAAASPGPPPPASPPGAPASP-RAPRTSPYGGLPAAPLAGPALPARRLSRA 816
Query: 186 ALGLGRREKLAARPAATPRRASRP 209
+ L + A P ++RP
Sbjct: 817 SRPLSASQPSLPHGAPGPAASTRP 840
Score = 29.3 bits (64), Expect = 3.4
Identities = 29/97 (29%), Positives = 30/97 (30%), Gaps = 35/97 (36%)
Query: 132 GAARAARAPKPPAPGSGQALPADPLLQAAASTLAGRPRAPPPAPAAGQRGLGSGALGLGR 191
GA A P PP P Q P P P APPP P
Sbjct: 15 GATPAPGPPPPPPPAPPQQQPPPP-----------PPPAPPPGPG--------------- 48
Query: 192 REKLAARPAATPRRASRPPWQGCRGARGLGGGRGPLR 228
A P PR + PP A GG RG LR
Sbjct: 49 ----PAPPQHPPRAEALPP-----EAADEGGPRGRLR 76
>gi|222418604 hypothetical protein LOC257407 [Homo sapiens]
Length = 295
Score = 40.0 bits (92), Expect = 0.002
Identities = 46/132 (34%), Positives = 55/132 (41%), Gaps = 13/132 (9%)
Query: 98 ARRLLSPCRAGGNRAYGR-ELLQVAEVWRIRQREAGAARAARAPKPPAPGSGQALPADPL 156
AR P +A A GR ++L V E+W Q A ARA PP PG+ A P
Sbjct: 13 ARPAEPPFQALVEAAGGRGQVLLVGELWEREQSRALLRDFARAVFPPEPGA--AKPGGAA 70
Query: 157 LQAAASTLA-GRPRAPPPAPAAGQRGLGSGALG------LGRREKLAARPAATPRRASRP 209
+ A A G RA A AAG + A+ L R LAAR PRR R
Sbjct: 71 AEGAGPGAARGAQRAARAAGAAGAAAAAARAIRSPLVFVLCRASSLAAR---EPRRRLRE 127
Query: 210 PWQGCRGARGLG 221
+ RG R G
Sbjct: 128 MLRDVRGRRRAG 139
Score = 33.1 bits (74), Expect = 0.24
Identities = 39/111 (35%), Positives = 46/111 (41%), Gaps = 17/111 (15%)
Query: 127 RQREAGAARAARAPKPP-------APGSGQALPADPLLQAAASTLAGRPRAP---PPAPA 176
R+ EA AAR AR +PP A G GQ L L + S R A PP P
Sbjct: 3 RELEALAARLARPAEPPFQALVEAAGGRGQVLLVGELWEREQSRALLRDFARAVFPPEPG 62
Query: 177 AGQRGLGSGALGLGRREKLAARPAATPRRASRPPWQGCRGARGLGGGRGPL 227
A + G G+ A G G AAR A RA+ AR + R PL
Sbjct: 63 AAKPG-GAAAEGAGPG---AARGAQRAARAAGAAGAAAAAARAI---RSPL 106
>gi|239756899 PREDICTED: hypothetical protein [Homo sapiens]
Length = 371
Score = 39.3 bits (90), Expect = 0.003
Identities = 41/126 (32%), Positives = 48/126 (38%), Gaps = 11/126 (8%)
Query: 106 RAGGNRAYGRELLQVAEVWRIRQREAGAARAAR------APKPPAPGSGQALPADPLLQA 159
R NR R + V R A A R AP PPAP A D
Sbjct: 28 RLDHNRPMSRPIFPVPLARRTELPGAAPAGEPRRGDPGVAPSPPAPEDSDARGED----G 83
Query: 160 AASTLAGRPRAPPPAPAAGQRGLGSGALGLGRRE-KLAARPAATPRRASRPPWQGCRGAR 218
AA+ PR + A GQ G G G RE K+ +A RA R P + R A
Sbjct: 84 AAAERRPEPRTRDLSGARGQTTGGEGREGAQTREGKMGLPDSARRPRAPRTPLRPERPAP 143
Query: 219 GLGGGR 224
G+ GGR
Sbjct: 144 GVPGGR 149
>gi|113427491 PREDICTED: hypothetical protein [Homo sapiens]
Length = 371
Score = 39.3 bits (90), Expect = 0.003
Identities = 41/126 (32%), Positives = 48/126 (38%), Gaps = 11/126 (8%)
Query: 106 RAGGNRAYGRELLQVAEVWRIRQREAGAARAAR------APKPPAPGSGQALPADPLLQA 159
R NR R + V R A A R AP PPAP A D
Sbjct: 28 RLDHNRPMSRPIFPVPLARRTELPGAAPAGEPRRGDPGVAPSPPAPEDSDARGED----G 83
Query: 160 AASTLAGRPRAPPPAPAAGQRGLGSGALGLGRRE-KLAARPAATPRRASRPPWQGCRGAR 218
AA+ PR + A GQ G G G RE K+ +A RA R P + R A
Sbjct: 84 AAAERRPEPRTRDLSGARGQTTGGEGREGAQTREGKMGLPDSARRPRAPRTPLRPERPAP 143
Query: 219 GLGGGR 224
G+ GGR
Sbjct: 144 GVPGGR 149
>gi|239745902 PREDICTED: hypothetical protein [Homo sapiens]
Length = 371
Score = 39.3 bits (90), Expect = 0.003
Identities = 41/126 (32%), Positives = 48/126 (38%), Gaps = 11/126 (8%)
Query: 106 RAGGNRAYGRELLQVAEVWRIRQREAGAARAAR------APKPPAPGSGQALPADPLLQA 159
R NR R + V R A A R AP PPAP A D
Sbjct: 28 RLDHNRPMSRPIFPVPLARRTELPGAAPAGEPRRGDPGVAPSPPAPEDSDARGED----G 83
Query: 160 AASTLAGRPRAPPPAPAAGQRGLGSGALGLGRRE-KLAARPAATPRRASRPPWQGCRGAR 218
AA+ PR + A GQ G G G RE K+ +A RA R P + R A
Sbjct: 84 AAAERRPEPRTRDLSGARGQTTGGEGREGAQTREGKMGLPDSARRPRAPRTPLRPERPAP 143
Query: 219 GLGGGR 224
G+ GGR
Sbjct: 144 GVPGGR 149
>gi|30089966 CDC42 effector protein 5 [Homo sapiens]
Length = 148
Score = 39.3 bits (90), Expect = 0.003
Identities = 31/86 (36%), Positives = 36/86 (41%), Gaps = 13/86 (15%)
Query: 131 AGAARAARAPKPPA-PGSGQALPADPLLQAAASTLAGRPRAPPPAPAAGQRGLGSGALGL 189
A A A R+P PPA P S PADPLL P A G +
Sbjct: 62 APPAGAPRSPPPPAVPQSAAPSPADPLLSFHLDL------GPSMLDAV------LGVMDA 109
Query: 190 GRREKLAARPAATPRRASRPPWQGCR 215
R E AA+P A PR ++PP CR
Sbjct: 110 ARPEAAAAKPDAEPRPGTQPPQARCR 135
>gi|112382270 matrix metalloproteinase 17 preproprotein [Homo
sapiens]
Length = 603
Score = 38.9 bits (89), Expect = 0.004
Identities = 23/49 (46%), Positives = 24/49 (48%)
Query: 135 RAARAPKPPAPGSGQALPADPLLQAAASTLAGRPRAPPPAPAAGQRGLG 183
RAAR P PP PG G + PLL A G AP PAP A LG
Sbjct: 4 RAARGPGPPPPGPGLSRLPLPLLLLLALGTRGGCAAPAPAPRAEDLSLG 52
>gi|238908524 hypothetical protein LOC389333 [Homo sapiens]
Length = 1015
Score = 38.5 bits (88), Expect = 0.006
Identities = 33/97 (34%), Positives = 42/97 (43%), Gaps = 5/97 (5%)
Query: 127 RQREAGAARAARAPKPPAP-GSGQALPADPLLQAAAST-LAGRPRAPPPAP---AAGQRG 181
R G AR++ P P G P P +QA+ S +A +P+ PP AP AA Q
Sbjct: 775 RTSPLGGARSSSQRSPVGPAGVRSPRPGSPQMQASPSPGIAPKPKTPPTAPEPAAAVQAP 834
Query: 182 LGSGALGLGRREKLAARPAATPRRASRPPWQGCRGAR 218
L L L R A AA+ R P +GAR
Sbjct: 835 LPREPLALAGRTAPAQPRAASAPPTDRSPQSPSQGAR 871
Score = 31.2 bits (69), Expect = 0.90
Identities = 32/107 (29%), Positives = 41/107 (38%), Gaps = 14/107 (13%)
Query: 139 APKPPAPGSGQALPADPLLQAAASTLAG----RPRAPPPAPAAG----QRGLGSGALGL- 189
+P PP P S A+P + S A RPR P PA A + L GA
Sbjct: 142 SPLPPGPASPAAVPRQSQVPDGGSRWATYLELRPRGPSPAAPAQFECVEVALEEGAAPAR 201
Query: 190 -----GRREKLAARPAATPRRASRPPWQGCRGARGLGGGRGPLREDA 231
R+ +L RP + PR A P + L GPL+ A
Sbjct: 202 PRTVPKRQIELRPRPQSPPRAAGAPRPRLLLRTGSLDESLGPLQAAA 248
>gi|169204821 PREDICTED: hypothetical protein [Homo sapiens]
Length = 160
Score = 38.5 bits (88), Expect = 0.006
Identities = 35/99 (35%), Positives = 42/99 (42%), Gaps = 14/99 (14%)
Query: 132 GAARAARAPKPPAPGSGQALPADPLLQAAASTLAGRPRAPPPAPAAGQR---GLGSGALG 188
G AR +PP ++ A +L AS G AP PAPA Q G+GAL
Sbjct: 25 GPARPFHRLRPPDTHPRGSVHAAGVLDGLASGRPGLLGAPAPAPALTQHPSLPQGAGALP 84
Query: 189 LGRRE----------KLAARPAATPRRAS-RPPWQGCRG 216
GRR L+ RP+ P R S PP G RG
Sbjct: 85 AGRRRPDRPRPAPPWPLSPRPSHLPSRVSAAPPPAGSRG 123
>gi|239753839 PREDICTED: hypothetical protein [Homo sapiens]
Length = 257
Score = 38.5 bits (88), Expect = 0.006
Identities = 35/92 (38%), Positives = 43/92 (46%), Gaps = 10/92 (10%)
Query: 97 PARRLLSPCRAGGNRAYGRELLQVAEVWRIRQREAGAARAAR----APKPPAPGS---GQ 149
PARRL PC A R L + R + AA AP+P APG+ G
Sbjct: 150 PARRLPPPCGGTSLGAGSRALRRPGSAALPRSPSSSRRWAAMPGPGAPRPGAPGTWPVGF 209
Query: 150 ALPADPLLQAAASTLAGRPRAPPPAPAAGQRG 181
A+ A P AAA+++A P A APAA RG
Sbjct: 210 AVAAPP---AAAASVAPPPPAVAGAPAAAFRG 238
Score = 35.0 bits (79), Expect = 0.062
Identities = 35/118 (29%), Positives = 48/118 (40%), Gaps = 10/118 (8%)
Query: 129 REAGAARAARAPKPPAPGSGQALPA--DPLLQAAASTLAGRPRAP----PPAPAAGQRGL 182
R G RAA + PAPG+ + PA + A A++ AG P PP G
Sbjct: 106 RAPGRGRAAATRRSPAPGTARGSPAGVERAGGATAASSAGTRSVPARRLPPPCGGTSLGA 165
Query: 183 GSGALGLGRREKLAARPAATPRRASRP----PWQGCRGARGLGGGRGPLREDAAALLP 236
GS AL L P+++ R A+ P P G G +G AA++ P
Sbjct: 166 GSRALRRPGSAALPRSPSSSRRWAAMPGPGAPRPGAPGTWPVGFAVAAPPAAAASVAP 223
Score = 33.1 bits (74), Expect = 0.24
Identities = 34/118 (28%), Positives = 46/118 (38%), Gaps = 11/118 (9%)
Query: 134 ARAARAPKPPAPGSGQALPADPLLQAAASTLAGRPRAPPPAPAAGQRGLGSGALGLGRRE 193
ARA+RA A +G A +AAA+ + P +PA +R G+ A
Sbjct: 88 ARASRAAGRRAGPAGPPCRAPGRGRAAATRRSPAPGTARGSPAGVERAGGATAAS----- 142
Query: 194 KLAARPAATPRRASRPPWQGCRGARGLGGGRGPLREDAAALLPQEVQQERYEFFPQGP 251
+A + P R PP G LG G LR +A LP+ R GP
Sbjct: 143 --SAGTRSVPARRLPPPC----GGTSLGAGSRALRRPGSAALPRSPSSSRRWAAMPGP 194
>gi|169205432 PREDICTED: hypothetical protein [Homo sapiens]
Length = 160
Score = 38.5 bits (88), Expect = 0.006
Identities = 35/99 (35%), Positives = 42/99 (42%), Gaps = 14/99 (14%)
Query: 132 GAARAARAPKPPAPGSGQALPADPLLQAAASTLAGRPRAPPPAPAAGQR---GLGSGALG 188
G AR +PP ++ A +L AS G AP PAPA Q G+GAL
Sbjct: 25 GPARPFHRLRPPDTHPRGSVHAAGVLDGLASGRPGLLGAPAPAPALTQHPSLPQGAGALP 84
Query: 189 LGRRE----------KLAARPAATPRRAS-RPPWQGCRG 216
GRR L+ RP+ P R S PP G RG
Sbjct: 85 AGRRRPDRPRPAPPWPLSPRPSHLPSRVSAAPPPAGSRG 123
>gi|169204105 PREDICTED: hypothetical protein [Homo sapiens]
Length = 160
Score = 38.5 bits (88), Expect = 0.006
Identities = 35/99 (35%), Positives = 42/99 (42%), Gaps = 14/99 (14%)
Query: 132 GAARAARAPKPPAPGSGQALPADPLLQAAASTLAGRPRAPPPAPAAGQR---GLGSGALG 188
G AR +PP ++ A +L AS G AP PAPA Q G+GAL
Sbjct: 25 GPARPFHRLRPPDTHPRGSVHAAGVLDGLASGRPGLLGAPAPAPALTQHPSLPQGAGALP 84
Query: 189 LGRRE----------KLAARPAATPRRAS-RPPWQGCRG 216
GRR L+ RP+ P R S PP G RG
Sbjct: 85 AGRRRPDRPRPAPPWPLSPRPSHLPSRVSAAPPPAGSRG 123
>gi|4507869 vasodilator-stimulated phosphoprotein [Homo sapiens]
Length = 380
Score = 38.1 bits (87), Expect = 0.007
Identities = 33/96 (34%), Positives = 38/96 (39%), Gaps = 2/96 (2%)
Query: 140 PKPPAPGSGQALPADPLLQAAASTLAGRPRAPPPAPAAGQRGLGSGALGLGRREKLA-AR 198
P PP P LP + AA G P APP A G G G+GA GL A R
Sbjct: 177 PPPPGPPPPPGLPPSGVPAAAHGAGGGPPPAPPLPAAQGPGGGGAGAPGLAAAIAGAKLR 236
Query: 199 PAATPRRASRPPWQGCRGARGLGGGRGPLREDAAAL 234
+ AS P + G GG G + E A L
Sbjct: 237 KVSKQEEASGGP-TAPKAESGRSGGGGLMEEMNAML 271
>gi|239754674 PREDICTED: hypothetical protein [Homo sapiens]
Length = 480
Score = 38.1 bits (87), Expect = 0.007
Identities = 40/116 (34%), Positives = 48/116 (41%), Gaps = 32/116 (27%)
Query: 125 RIRQ--REAGAARAAR-----APKPPAPGSGQALPADPLLQAAASTLAGRP--------R 169
R+R+ R GA+R R A PPAPG G L +A+ S AGRP +
Sbjct: 219 RVREPGRAEGASREPRLRSRAARPPPAPGPG------ALSRASRSRAAGRPGPGFHGGEK 272
Query: 170 APPPAPAAGQRGLGSGALGLGRREKLAARPAATPRRASRPPWQGCRGARGLGGGRG 225
A P G G GALG AA P RA + W G G +G RG
Sbjct: 273 AAAPRAPGGGGGRNPGALG----------RAAPPSRARQDAW-GLSGCATVGLRRG 317
Score = 34.3 bits (77), Expect = 0.11
Identities = 36/103 (34%), Positives = 40/103 (38%), Gaps = 32/103 (31%)
Query: 136 AARAPKPPAPGSGQALPADPLLQAAAST---LAGRPRAPPPAPAAGQRGLGSGALGLGRR 192
AA AP+P P + A +P AS L R PPPAP G GAL R
Sbjct: 205 AAPAPQP-GPTAPPARVREPGRAEGASREPRLRSRAARPPPAP-------GPGALSRASR 256
Query: 193 EKLAARP---------AATPRRASRPPWQGCRGARGLGGGRGP 226
+ A RP AA PR A G GGGR P
Sbjct: 257 SRAAGRPGPGFHGGEKAAAPR------------APGGGGGRNP 287
>gi|169163728 PREDICTED: hypothetical protein [Homo sapiens]
Length = 237
Score = 38.1 bits (87), Expect = 0.007
Identities = 42/116 (36%), Positives = 47/116 (40%), Gaps = 17/116 (14%)
Query: 127 RQREAGA-ARAARAPKPPAPGSGQALPA---DPLLQAAASTLAGRPRAPPPAPAAGQRGL 182
R R G R R P+ P+P ALPA P + A R PP PA GQ G
Sbjct: 42 RARRRGTWLRVLRGPRAPSPAP--ALPARARPPRENRKRAVPARAARGPPKRPAGGQTGG 99
Query: 183 GSGALGLGRREKLAARPAATPRRASRPPWQGCRGARGLGGGRGPLREDAAALLPQE 238
A G R + PRR RPP R R G R L E AA LL +E
Sbjct: 100 VEAASGEERSQ---------PRRPRRPP-PAPRRPRPAPGRRKSLYE-AAPLLTRE 144
Score = 28.9 bits (63), Expect = 4.5
Identities = 29/87 (33%), Positives = 34/87 (39%), Gaps = 6/87 (6%)
Query: 146 GSGQALPADPLLQAAASTLAGRPRAPPPAPAAGQRGLGSGALGLGRREKLAARPA-ATPR 204
G P P + A AG R P P A +RG L R A PA A P
Sbjct: 12 GGQWGTPLYPRARGPAIASAGYSRPPSPVGRARRRGTWLRVL----RGPRAPSPAPALPA 67
Query: 205 RASRPPWQGCRGARGLGGGRGPLREDA 231
RA RPP + + A RGP + A
Sbjct: 68 RA-RPPRENRKRAVPARAARGPPKRPA 93
>gi|169163708 PREDICTED: hypothetical protein [Homo sapiens]
Length = 237
Score = 38.1 bits (87), Expect = 0.007
Identities = 42/116 (36%), Positives = 47/116 (40%), Gaps = 17/116 (14%)
Query: 127 RQREAGA-ARAARAPKPPAPGSGQALPA---DPLLQAAASTLAGRPRAPPPAPAAGQRGL 182
R R G R R P+ P+P ALPA P + A R PP PA GQ G
Sbjct: 42 RARRRGTWLRVLRGPRAPSPAP--ALPARARPPRENRKRAVPARAARGPPKRPAGGQTGG 99
Query: 183 GSGALGLGRREKLAARPAATPRRASRPPWQGCRGARGLGGGRGPLREDAAALLPQE 238
A G R + PRR RPP R R G R L E AA LL +E
Sbjct: 100 VEAASGEERSQ---------PRRPRRPP-PAPRRPRPAPGRRKSLYE-AAPLLTRE 144
Score = 28.9 bits (63), Expect = 4.5
Identities = 29/87 (33%), Positives = 34/87 (39%), Gaps = 6/87 (6%)
Query: 146 GSGQALPADPLLQAAASTLAGRPRAPPPAPAAGQRGLGSGALGLGRREKLAARPA-ATPR 204
G P P + A AG R P P A +RG L R A PA A P
Sbjct: 12 GGQWGTPLYPRARGPAIASAGYSRPPSPVGRARRRGTWLRVL----RGPRAPSPAPALPA 67
Query: 205 RASRPPWQGCRGARGLGGGRGPLREDA 231
RA RPP + + A RGP + A
Sbjct: 68 RA-RPPRENRKRAVPARAARGPPKRPA 93
>gi|169163019 PREDICTED: hypothetical protein [Homo sapiens]
Length = 237
Score = 38.1 bits (87), Expect = 0.007
Identities = 42/116 (36%), Positives = 47/116 (40%), Gaps = 17/116 (14%)
Query: 127 RQREAGA-ARAARAPKPPAPGSGQALPA---DPLLQAAASTLAGRPRAPPPAPAAGQRGL 182
R R G R R P+ P+P ALPA P + A R PP PA GQ G
Sbjct: 42 RARRRGTWLRVLRGPRAPSPAP--ALPARARPPRENRKRAVPARAARGPPKRPAGGQTGG 99
Query: 183 GSGALGLGRREKLAARPAATPRRASRPPWQGCRGARGLGGGRGPLREDAAALLPQE 238
A G R + PRR RPP R R G R L E AA LL +E
Sbjct: 100 VEAASGEERSQ---------PRRPRRPP-PAPRRPRPAPGRRKSLYE-AAPLLTRE 144
Score = 28.9 bits (63), Expect = 4.5
Identities = 29/87 (33%), Positives = 34/87 (39%), Gaps = 6/87 (6%)
Query: 146 GSGQALPADPLLQAAASTLAGRPRAPPPAPAAGQRGLGSGALGLGRREKLAARPA-ATPR 204
G P P + A AG R P P A +RG L R A PA A P
Sbjct: 12 GGQWGTPLYPRARGPAIASAGYSRPPSPVGRARRRGTWLRVL----RGPRAPSPAPALPA 67
Query: 205 RASRPPWQGCRGARGLGGGRGPLREDA 231
RA RPP + + A RGP + A
Sbjct: 68 RA-RPPRENRKRAVPARAARGPPKRPA 93
>gi|239753673 PREDICTED: hypothetical protein [Homo sapiens]
Length = 380
Score = 37.7 bits (86), Expect = 0.010
Identities = 47/187 (25%), Positives = 70/187 (37%), Gaps = 19/187 (10%)
Query: 79 EAEKKGWVGHKHWKSWVDPARRLLSPCRAGGNRAYGRELLQVAEVWRIRQREAGAARAAR 138
+AE + +H + + AR L+P R G RA + V R R GA +
Sbjct: 100 QAEVPLVLSERHVPAGIPGARGRLAPARGGAARARLLAVEVRVAVQSERHRHVGAVQLVP 159
Query: 139 APKPPAPGS---------GQALPADPLLQAAASTLAGRPRAPPPAPAAGQRGLG----SG 185
AP+ A + G PA ++ L RP +PPP PA +R G
Sbjct: 160 APRQAAQAADTGPRHASPGARRPAPGARRSRPRLL--RPASPPPRPAPRRRSTAPRHEGG 217
Query: 186 ALGLGRREKLAARPAATPRRASRPPWQGCRGARGLGGGRGPLREDAAALLPQEVQQERYE 245
G GR + +P +R +G R L +G E A L + + E
Sbjct: 218 RPGRGRTRR---QPHLAGAGCARLELEGARMGERLHRRQG-APETACIHLQVSISKNASE 273
Query: 246 FFPQGPE 252
P+ P+
Sbjct: 274 LNPKFPQ 280
>gi|169216507 PREDICTED: similar to hCG1645335 [Homo sapiens]
Length = 409
Score = 37.7 bits (86), Expect = 0.010
Identities = 33/110 (30%), Positives = 45/110 (40%), Gaps = 10/110 (9%)
Query: 117 LLQVAEVW-----RIRQREAGAARAARAPKPPA----PGSGQALPADPLLQAAASTLAGR 167
L++ E W R +Q A AA + P A P G A A P + AA +
Sbjct: 273 LIREMEAWAAFPARSQQGVAWAAAPVESEDPAAAQASPAQGNASEAGPGAEDAAEAASAT 332
Query: 168 PRAPPPAPAAGQ-RGLGSGALGLGRREKLAARPAATPRRASRPPWQGCRG 216
A APAAG+ +G GLG+ + ++P R S W RG
Sbjct: 333 KEAARGAPAAGEGESAPAGPEGLGQARPIEVPWGSSPARMSSAVWVFPRG 382
>gi|239750101 PREDICTED: hypothetical protein [Homo sapiens]
Length = 365
Score = 37.7 bits (86), Expect = 0.010
Identities = 30/84 (35%), Positives = 36/84 (42%), Gaps = 8/84 (9%)
Query: 127 RQREAGAARAARAPKPPAPGSGQALPADPLLQAAASTLAGRPRAPPPAPAAGQRGLGSGA 186
R + AA + P+P G+ PA+P A RP PPPAP A R L
Sbjct: 284 RPQTTPAAASPDLPQPAERSRGEPRPAEPRAPPRPPPAARRP-PPPPAPGAPARPL---- 338
Query: 187 LGLGRREK-LAARPAATPRRASRP 209
GRR AARP A P + P
Sbjct: 339 --RGRRSHGPAARPRAVPTTSLAP 360
>gi|169216732 PREDICTED: similar to hCG1645335 [Homo sapiens]
Length = 409
Score = 37.7 bits (86), Expect = 0.010
Identities = 33/110 (30%), Positives = 45/110 (40%), Gaps = 10/110 (9%)
Query: 117 LLQVAEVW-----RIRQREAGAARAARAPKPPA----PGSGQALPADPLLQAAASTLAGR 167
L++ E W R +Q A AA + P A P G A A P + AA +
Sbjct: 273 LIREMEAWAAFPARSQQGVAWAAAPVESEDPAAAQASPAQGNASEAGPGAEDAAEAASAT 332
Query: 168 PRAPPPAPAAGQ-RGLGSGALGLGRREKLAARPAATPRRASRPPWQGCRG 216
A APAAG+ +G GLG+ + ++P R S W RG
Sbjct: 333 KEAARGAPAAGEGESAPAGPEGLGQARPIEVPWGSSPARMSSAVWVFPRG 382
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.136 0.426
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,288,139
Number of Sequences: 37866
Number of extensions: 790433
Number of successful extensions: 8420
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 178
Number of HSP's successfully gapped in prelim test: 838
Number of HSP's that attempted gapping in prelim test: 6582
Number of HSP's gapped (non-prelim): 2412
length of query: 252
length of database: 18,247,518
effective HSP length: 100
effective length of query: 152
effective length of database: 14,460,918
effective search space: 2198059536
effective search space used: 2198059536
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.