Search of human proteins with 239752084

Search of human proteins with 239752084

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239752084 PREDICTED: hypothetical protein [Homo sapiens]
         (152 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239757574 PREDICTED: hypothetical protein [Homo sapiens]           309   7e-85
gi|239752084 PREDICTED: hypothetical protein [Homo sapiens]           309   7e-85
gi|239746581 PREDICTED: hypothetical protein [Homo sapiens]           309   7e-85
gi|189491634 upstream binding protein 1 (LBP-1a) isoform a [Homo...    32   0.21 
gi|189491632 upstream binding protein 1 (LBP-1a) isoform b [Homo...    32   0.21 
gi|189491630 upstream binding protein 1 (LBP-1a) isoform a [Homo...    32   0.21 
gi|122056617 LIM domain binding 3 isoform 3 [Homo sapiens]             30   1.0  
gi|45592959 LIM domain binding 3 isoform 1 [Homo sapiens]              30   1.0  
gi|130502140 NEZHA isoform 2 [Homo sapiens]                            30   1.0  
gi|122937255 NEZHA isoform 1 [Homo sapiens]                            30   1.0  
gi|40316935 alsin isoform 1 [Homo sapiens]                             29   1.4  
gi|37537558 nuclear apoptosis inducing factor 1 [Homo sapiens]         29   1.4  
gi|54792100 erbB-3 isoform 1 precursor [Homo sapiens]                  29   1.8  
gi|156139122 CXXC finger 6 [Homo sapiens]                              28   3.0  
gi|91208418 transcription elongation regulator 1 isoform 2 [Homo...    28   3.0  
gi|21327715 transcription elongation regulator 1 isoform 1 [Homo...    28   3.0  
gi|84370252 MARVEL domain containing 2 isoform 1 [Homo sapiens]        28   3.0  
gi|18644728 nucleolar protein family 6 alpha isoform [Homo sapiens]    28   3.0  
gi|49410495 TSPY-like 5 [Homo sapiens]                                 28   3.9  
gi|67190748 complement component 4A preproprotein [Homo sapiens]       27   5.1  
gi|178557739 complement component 4B preproprotein [Homo sapiens]      27   5.1  
gi|239758130 PREDICTED: similar to complement component 4B (Chil...    27   5.1  
gi|239740686 PREDICTED: similar to C4A protein isoform 2 [Homo s...    27   5.1  
gi|239740684 PREDICTED: similar to C4A protein isoform 1 [Homo s...    27   5.1  
gi|140561070 RIM-binding protein 2 [Homo sapiens]                      27   5.1  
gi|26051231 lactamase, beta isoform a [Homo sapiens]                   27   5.1  
gi|26051233 lactamase, beta isoform b [Homo sapiens]                   27   5.1  
gi|109826351 melanophilin isoform 2 [Homo sapiens]                     27   5.1  
gi|13129108 melanophilin isoform 1 [Homo sapiens]                      27   5.1  
gi|157364926 dystrotelin [Homo sapiens]                                27   5.1  

>gi|239757574 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 152

 Score =  309 bits (791), Expect = 7e-85
 Identities = 152/152 (100%), Positives = 152/152 (100%)

Query: 1   MYLSPGIRKKSLAIKTEPRMSSSPHPQREALWTPQTPGAPVHRFFFGEATSPPHTLEGDA 60
           MYLSPGIRKKSLAIKTEPRMSSSPHPQREALWTPQTPGAPVHRFFFGEATSPPHTLEGDA
Sbjct: 1   MYLSPGIRKKSLAIKTEPRMSSSPHPQREALWTPQTPGAPVHRFFFGEATSPPHTLEGDA 60

Query: 61  RVVDQHVQAPVLLAQEVAQGADALQIVDVQLVEARAQALRLQLLYGRLAPRHVPRREHHV 120
           RVVDQHVQAPVLLAQEVAQGADALQIVDVQLVEARAQALRLQLLYGRLAPRHVPRREHHV
Sbjct: 61  RVVDQHVQAPVLLAQEVAQGADALQIVDVQLVEARAQALRLQLLYGRLAPRHVPRREHHV 120

Query: 121 PREQPAQVAHDGQADALVASSHQRYMDAGRHG 152
           PREQPAQVAHDGQADALVASSHQRYMDAGRHG
Sbjct: 121 PREQPAQVAHDGQADALVASSHQRYMDAGRHG 152


>gi|239752084 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 152

 Score =  309 bits (791), Expect = 7e-85
 Identities = 152/152 (100%), Positives = 152/152 (100%)

Query: 1   MYLSPGIRKKSLAIKTEPRMSSSPHPQREALWTPQTPGAPVHRFFFGEATSPPHTLEGDA 60
           MYLSPGIRKKSLAIKTEPRMSSSPHPQREALWTPQTPGAPVHRFFFGEATSPPHTLEGDA
Sbjct: 1   MYLSPGIRKKSLAIKTEPRMSSSPHPQREALWTPQTPGAPVHRFFFGEATSPPHTLEGDA 60

Query: 61  RVVDQHVQAPVLLAQEVAQGADALQIVDVQLVEARAQALRLQLLYGRLAPRHVPRREHHV 120
           RVVDQHVQAPVLLAQEVAQGADALQIVDVQLVEARAQALRLQLLYGRLAPRHVPRREHHV
Sbjct: 61  RVVDQHVQAPVLLAQEVAQGADALQIVDVQLVEARAQALRLQLLYGRLAPRHVPRREHHV 120

Query: 121 PREQPAQVAHDGQADALVASSHQRYMDAGRHG 152
           PREQPAQVAHDGQADALVASSHQRYMDAGRHG
Sbjct: 121 PREQPAQVAHDGQADALVASSHQRYMDAGRHG 152


>gi|239746581 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 152

 Score =  309 bits (791), Expect = 7e-85
 Identities = 152/152 (100%), Positives = 152/152 (100%)

Query: 1   MYLSPGIRKKSLAIKTEPRMSSSPHPQREALWTPQTPGAPVHRFFFGEATSPPHTLEGDA 60
           MYLSPGIRKKSLAIKTEPRMSSSPHPQREALWTPQTPGAPVHRFFFGEATSPPHTLEGDA
Sbjct: 1   MYLSPGIRKKSLAIKTEPRMSSSPHPQREALWTPQTPGAPVHRFFFGEATSPPHTLEGDA 60

Query: 61  RVVDQHVQAPVLLAQEVAQGADALQIVDVQLVEARAQALRLQLLYGRLAPRHVPRREHHV 120
           RVVDQHVQAPVLLAQEVAQGADALQIVDVQLVEARAQALRLQLLYGRLAPRHVPRREHHV
Sbjct: 61  RVVDQHVQAPVLLAQEVAQGADALQIVDVQLVEARAQALRLQLLYGRLAPRHVPRREHHV 120

Query: 121 PREQPAQVAHDGQADALVASSHQRYMDAGRHG 152
           PREQPAQVAHDGQADALVASSHQRYMDAGRHG
Sbjct: 121 PREQPAQVAHDGQADALVASSHQRYMDAGRHG 152


>gi|189491634 upstream binding protein 1 (LBP-1a) isoform a [Homo
           sapiens]
          Length = 540

 Score = 32.0 bits (71), Expect = 0.21
 Identities = 32/112 (28%), Positives = 48/112 (42%), Gaps = 21/112 (18%)

Query: 49  ATSPPHTLEGDARVVDQHVQAPVLLAQEVAQ------------------GADALQIVDVQ 90
           ++SP H  +G ++   + +Q P    QE  Q                  GAD L++    
Sbjct: 346 SSSPNHQGDGASQTSGEQIQ-PSATIQETQQWLLKNRFSSYTRLFSNFSGADLLKLTKED 404

Query: 91  LVEARAQALRLQLLYGRLAPRHV-PRREHHVPREQPAQVAHDGQADALVASS 141
           LV+    A  ++L Y  L  R V PR   +V REQP+     GQ  A  ++S
Sbjct: 405 LVQICGAADGIRL-YNSLKSRSVRPRLTIYVCREQPSSTVLQGQQQAASSAS 455


>gi|189491632 upstream binding protein 1 (LBP-1a) isoform b [Homo
           sapiens]
          Length = 504

 Score = 32.0 bits (71), Expect = 0.21
 Identities = 32/112 (28%), Positives = 48/112 (42%), Gaps = 21/112 (18%)

Query: 49  ATSPPHTLEGDARVVDQHVQAPVLLAQEVAQ------------------GADALQIVDVQ 90
           ++SP H  +G ++   + +Q P    QE  Q                  GAD L++    
Sbjct: 310 SSSPNHQGDGASQTSGEQIQ-PSATIQETQQWLLKNRFSSYTRLFSNFSGADLLKLTKED 368

Query: 91  LVEARAQALRLQLLYGRLAPRHV-PRREHHVPREQPAQVAHDGQADALVASS 141
           LV+    A  ++L Y  L  R V PR   +V REQP+     GQ  A  ++S
Sbjct: 369 LVQICGAADGIRL-YNSLKSRSVRPRLTIYVCREQPSSTVLQGQQQAASSAS 419


>gi|189491630 upstream binding protein 1 (LBP-1a) isoform a [Homo
           sapiens]
          Length = 540

 Score = 32.0 bits (71), Expect = 0.21
 Identities = 32/112 (28%), Positives = 48/112 (42%), Gaps = 21/112 (18%)

Query: 49  ATSPPHTLEGDARVVDQHVQAPVLLAQEVAQ------------------GADALQIVDVQ 90
           ++SP H  +G ++   + +Q P    QE  Q                  GAD L++    
Sbjct: 346 SSSPNHQGDGASQTSGEQIQ-PSATIQETQQWLLKNRFSSYTRLFSNFSGADLLKLTKED 404

Query: 91  LVEARAQALRLQLLYGRLAPRHV-PRREHHVPREQPAQVAHDGQADALVASS 141
           LV+    A  ++L Y  L  R V PR   +V REQP+     GQ  A  ++S
Sbjct: 405 LVQICGAADGIRL-YNSLKSRSVRPRLTIYVCREQPSSTVLQGQQQAASSAS 455


>gi|122056617 LIM domain binding 3 isoform 3 [Homo sapiens]
          Length = 330

 Score = 29.6 bits (65), Expect = 1.0
 Identities = 20/59 (33%), Positives = 24/59 (40%)

Query: 23  SPHPQREALWTPQTPGAPVHRFFFGEATSPPHTLEGDARVVDQHVQAPVLLAQEVAQGA 81
           +P P  EA  +P TPG P  R  F  A S P      A   D       L A+   +GA
Sbjct: 119 APSPSPEARASPGTPGTPELRPTFSPAFSRPSAFSSLAEASDPGPPRASLRAKTSPEGA 177


>gi|45592959 LIM domain binding 3 isoform 1 [Homo sapiens]
          Length = 727

 Score = 29.6 bits (65), Expect = 1.0
 Identities = 20/59 (33%), Positives = 24/59 (40%)

Query: 23  SPHPQREALWTPQTPGAPVHRFFFGEATSPPHTLEGDARVVDQHVQAPVLLAQEVAQGA 81
           +P P  EA  +P TPG P  R  F  A S P      A   D       L A+   +GA
Sbjct: 119 APSPSPEARASPGTPGTPELRPTFSPAFSRPSAFSSLAEASDPGPPRASLRAKTSPEGA 177


>gi|130502140 NEZHA isoform 2 [Homo sapiens]
          Length = 1249

 Score = 29.6 bits (65), Expect = 1.0
 Identities = 31/98 (31%), Positives = 43/98 (43%), Gaps = 11/98 (11%)

Query: 6   GIRKKSLAIKTEPRMSSSP---HPQREALWTP--QTPGAPVHRFFFGEATSPPHTLEGDA 60
           G  K SLA    P  +S P    P +  ++ P  +TP  P      GEA+ PP   EG  
Sbjct: 490 GPSKPSLASPYLPEGTSKPLSDRPTKAPVYMPHPETPSKP-SPCLVGEASKPPAPSEGSP 548

Query: 61  RVVDQHVQAPVLLAQEVAQGADALQIVDVQLVEARAQA 98
           + V     +P     EV   + A +    QLV+A A+A
Sbjct: 549 KAV---ASSPAATNSEVKMTSFAER--KKQLVKAEAEA 581


>gi|122937255 NEZHA isoform 1 [Homo sapiens]
          Length = 1276

 Score = 29.6 bits (65), Expect = 1.0
 Identities = 31/98 (31%), Positives = 43/98 (43%), Gaps = 11/98 (11%)

Query: 6   GIRKKSLAIKTEPRMSSSP---HPQREALWTP--QTPGAPVHRFFFGEATSPPHTLEGDA 60
           G  K SLA    P  +S P    P +  ++ P  +TP  P      GEA+ PP   EG  
Sbjct: 517 GPSKPSLASPYLPEGTSKPLSDRPTKAPVYMPHPETPSKP-SPCLVGEASKPPAPSEGSP 575

Query: 61  RVVDQHVQAPVLLAQEVAQGADALQIVDVQLVEARAQA 98
           + V     +P     EV   + A +    QLV+A A+A
Sbjct: 576 KAV---ASSPAATNSEVKMTSFAER--KKQLVKAEAEA 608


>gi|40316935 alsin isoform 1 [Homo sapiens]
          Length = 1657

 Score = 29.3 bits (64), Expect = 1.4
 Identities = 20/68 (29%), Positives = 33/68 (48%), Gaps = 2/68 (2%)

Query: 75  QEVAQGADALQIVDVQLVEARAQALRLQL--LYGRLAPRHVPRREHHVPREQPAQVAHDG 132
           QE  QG  +  +VD++  E    + RL L  L  +++PR + +      R       + G
Sbjct: 456 QESMQGKKSSSLVDIREEETEGGSRRLSLPGLLSQVSPRLLRKAARVKTRTVVLTPTYSG 515

Query: 133 QADALVAS 140
           +ADAL+ S
Sbjct: 516 EADALLPS 523


>gi|37537558 nuclear apoptosis inducing factor 1 [Homo sapiens]
          Length = 327

 Score = 29.3 bits (64), Expect = 1.4
 Identities = 27/98 (27%), Positives = 42/98 (42%), Gaps = 21/98 (21%)

Query: 59  DARVVDQHVQAPVLLAQEVAQGADALQIVD-VQLVEARAQALRLQLLYGRLAPRHV---- 113
           + RV + HV+    +AQ + Q  D LQ++   Q V+A AQ  + Q + G  A   V    
Sbjct: 232 EQRVTNLHVKE---IAQHLEQQNDLLQMIRRSQEVQACAQERQAQAMEGTQAALSVLIQV 288

Query: 114 -------------PRREHHVPREQPAQVAHDGQADALV 138
                            +  P   P QVA +GQ D+++
Sbjct: 289 LRPMIKDFRRYLQSNTANPAPASDPGQVAQNGQPDSII 326


>gi|54792100 erbB-3 isoform 1 precursor [Homo sapiens]
          Length = 1342

 Score = 28.9 bits (63), Expect = 1.8
 Identities = 14/33 (42%), Positives = 19/33 (57%)

Query: 8    RKKSLAIKTEPRMSSSPHPQREALWTPQTPGAP 40
            R +S +    PR  S+ H QR +L TP TP +P
Sbjct: 1116 RSRSRSRSPRPRGDSAYHSQRHSLLTPVTPLSP 1148


>gi|156139122 CXXC finger 6 [Homo sapiens]
          Length = 2136

 Score = 28.1 bits (61), Expect = 3.0
 Identities = 21/60 (35%), Positives = 26/60 (43%), Gaps = 12/60 (20%)

Query: 7    IRKKSLAIKTEPRMSSSPHPQREA----LWTPQTPGA--------PVHRFFFGEATSPPH 54
            I K S   KT   M S+PHP +EA     W+P+T  A              F E +S PH
Sbjct: 1821 ILKSSDNTKTYSLMPSAPHPVKEASPGFSWSPKTASATPAPLKNDATASCGFSERSSTPH 1880


>gi|91208418 transcription elongation regulator 1 isoform 2 [Homo
           sapiens]
          Length = 1077

 Score = 28.1 bits (61), Expect = 3.0
 Identities = 27/124 (21%), Positives = 44/124 (35%), Gaps = 2/124 (1%)

Query: 26  PQREALWTP-QTPGAPVHRFFFGEATSPPHTLEGDARVVDQHVQAPVLLAQEVAQGADAL 84
           P  E +W   +TP   V+ ++         T     +V+ Q    P+L AQ   Q     
Sbjct: 131 PPTEEIWVENKTPDGKVY-YYNARTRESAWTKPDGVKVIQQSELTPMLAAQAQVQAQAQA 189

Query: 85  QIVDVQLVEARAQALRLQLLYGRLAPRHVPRREHHVPREQPAQVAHDGQADALVASSHQR 144
           Q       +A+AQA        +   +   + +     +  AQ     QA A V +  Q 
Sbjct: 190 QAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQVQAQVQA 249

Query: 145 YMDA 148
            + A
Sbjct: 250 QVQA 253


>gi|21327715 transcription elongation regulator 1 isoform 1 [Homo
           sapiens]
          Length = 1098

 Score = 28.1 bits (61), Expect = 3.0
 Identities = 27/124 (21%), Positives = 44/124 (35%), Gaps = 2/124 (1%)

Query: 26  PQREALWTP-QTPGAPVHRFFFGEATSPPHTLEGDARVVDQHVQAPVLLAQEVAQGADAL 84
           P  E +W   +TP   V+ ++         T     +V+ Q    P+L AQ   Q     
Sbjct: 131 PPTEEIWVENKTPDGKVY-YYNARTRESAWTKPDGVKVIQQSELTPMLAAQAQVQAQAQA 189

Query: 85  QIVDVQLVEARAQALRLQLLYGRLAPRHVPRREHHVPREQPAQVAHDGQADALVASSHQR 144
           Q       +A+AQA        +   +   + +     +  AQ     QA A V +  Q 
Sbjct: 190 QAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQVQAQVQA 249

Query: 145 YMDA 148
            + A
Sbjct: 250 QVQA 253


>gi|84370252 MARVEL domain containing 2 isoform 1 [Homo sapiens]
          Length = 558

 Score = 28.1 bits (61), Expect = 3.0
 Identities = 15/55 (27%), Positives = 27/55 (49%), Gaps = 4/55 (7%)

Query: 65  QHVQAPVLLAQ----EVAQGADALQIVDVQLVEARAQALRLQLLYGRLAPRHVPR 115
           Q +  P L ++    E+A   D  +  +V   E R   ++ +LL G + P H+P+
Sbjct: 381 QEINEPSLSSKRKMCEMATSGDRQRDSEVNFKELRTAKMKPELLSGHIPPGHIPK 435


>gi|18644728 nucleolar protein family 6 alpha isoform [Homo sapiens]
          Length = 1146

 Score = 28.1 bits (61), Expect = 3.0
 Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 9/58 (15%)

Query: 72   LLAQEVAQGADALQIVDVQLVEARAQA---------LRLQLLYGRLAPRHVPRREHHV 120
            +L Q V   A+AL +++ QL++ R            L +  +  RL+PRH+PR    V
Sbjct: 969  ILQQLVVLAAEALPMLEKQLMDPRGPGDIRTVFRPPLDIYDVLIRLSPRHIPRHRQAV 1026


>gi|49410495 TSPY-like 5 [Homo sapiens]
          Length = 417

 Score = 27.7 bits (60), Expect = 3.9
 Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 4/41 (9%)

Query: 82  DALQIVDVQLVEARAQA----LRLQLLYGRLAPRHVPRREH 118
           D L+ V ++L    AQA    LRL   +G+L  +H+ RR H
Sbjct: 203 DTLENVQLKLENMNAQADRAYLRLSRKFGQLRLQHLERRNH 243


>gi|67190748 complement component 4A preproprotein [Homo sapiens]
          Length = 1744

 Score = 27.3 bits (59), Expect = 5.1
 Identities = 18/60 (30%), Positives = 24/60 (40%), Gaps = 10/60 (16%)

Query: 6    GIRKKSLAIKTEPRMSSSPHPQREALWTPQTPGAPVHRFFFGEATSPPHTLEGDARVVDQ 65
            G +  +++    PR  S P PQ  ALW   T  A +H              EG A + DQ
Sbjct: 1235 GSQSNAVSPTPAPRNPSDPMPQAPALWIETTAYALLHLLLH----------EGKAEMADQ 1284


>gi|178557739 complement component 4B preproprotein [Homo sapiens]
          Length = 1744

 Score = 27.3 bits (59), Expect = 5.1
 Identities = 18/60 (30%), Positives = 24/60 (40%), Gaps = 10/60 (16%)

Query: 6    GIRKKSLAIKTEPRMSSSPHPQREALWTPQTPGAPVHRFFFGEATSPPHTLEGDARVVDQ 65
            G +  +++    PR  S P PQ  ALW   T  A +H              EG A + DQ
Sbjct: 1235 GSQSNAVSPTPAPRNPSDPMPQAPALWIETTAYALLHLLLH----------EGKAEMADQ 1284


>gi|239758130 PREDICTED: similar to complement component 4B (Childo
           blood group), partial [Homo sapiens]
          Length = 666

 Score = 27.3 bits (59), Expect = 5.1
 Identities = 18/60 (30%), Positives = 24/60 (40%), Gaps = 10/60 (16%)

Query: 6   GIRKKSLAIKTEPRMSSSPHPQREALWTPQTPGAPVHRFFFGEATSPPHTLEGDARVVDQ 65
           G +  +++    PR  S P PQ  ALW   T  A +H              EG A + DQ
Sbjct: 157 GSQSNAVSPTPAPRNPSDPMPQAPALWIETTAYALLHLLLH----------EGKAEMADQ 206


>gi|239740686 PREDICTED: similar to C4A protein isoform 2 [Homo
            sapiens]
          Length = 1698

 Score = 27.3 bits (59), Expect = 5.1
 Identities = 18/60 (30%), Positives = 24/60 (40%), Gaps = 10/60 (16%)

Query: 6    GIRKKSLAIKTEPRMSSSPHPQREALWTPQTPGAPVHRFFFGEATSPPHTLEGDARVVDQ 65
            G +  +++    PR  S P PQ  ALW   T  A +H              EG A + DQ
Sbjct: 1235 GSQSNAVSPTPAPRNPSDPMPQAPALWIETTAYALLHLLLH----------EGKAEMADQ 1284


>gi|239740684 PREDICTED: similar to C4A protein isoform 1 [Homo
            sapiens]
          Length = 1744

 Score = 27.3 bits (59), Expect = 5.1
 Identities = 18/60 (30%), Positives = 24/60 (40%), Gaps = 10/60 (16%)

Query: 6    GIRKKSLAIKTEPRMSSSPHPQREALWTPQTPGAPVHRFFFGEATSPPHTLEGDARVVDQ 65
            G +  +++    PR  S P PQ  ALW   T  A +H              EG A + DQ
Sbjct: 1235 GSQSNAVSPTPAPRNPSDPMPQAPALWIETTAYALLHLLLH----------EGKAEMADQ 1284


>gi|140561070 RIM-binding protein 2 [Homo sapiens]
          Length = 1052

 Score = 27.3 bits (59), Expect = 5.1
 Identities = 20/86 (23%), Positives = 27/86 (31%), Gaps = 3/86 (3%)

Query: 5   PGIRKKSLAIKTEPRMSSS---PHPQREALWTPQTPGAPVHRFFFGEATSPPHTLEGDAR 61
           P  + K LA    P        PH + +  W       PVH         P       +R
Sbjct: 595 PAPQSKPLASSGVPETKDEHLGPHARMDEAWEQSRAPGPVHGHMLEPPVGPGRRSPSPSR 654

Query: 62  VVDQHVQAPVLLAQEVAQGADALQIV 87
           ++ Q    PV      A   +A Q V
Sbjct: 655 ILPQPQGTPVSTTVAKAMAREAAQRV 680


>gi|26051231 lactamase, beta isoform a [Homo sapiens]
          Length = 547

 Score = 27.3 bits (59), Expect = 5.1
 Identities = 11/26 (42%), Positives = 14/26 (53%)

Query: 20  MSSSPHPQREALWTPQTPGAPVHRFF 45
           ++  P  Q  A W+PQTP  P  R F
Sbjct: 79  LAEPPQEQSLAPWSPQTPAPPCSRCF 104


>gi|26051233 lactamase, beta isoform b [Homo sapiens]
          Length = 373

 Score = 27.3 bits (59), Expect = 5.1
 Identities = 11/26 (42%), Positives = 14/26 (53%)

Query: 20  MSSSPHPQREALWTPQTPGAPVHRFF 45
           ++  P  Q  A W+PQTP  P  R F
Sbjct: 79  LAEPPQEQSLAPWSPQTPAPPCSRCF 104


>gi|109826351 melanophilin isoform 2 [Homo sapiens]
          Length = 572

 Score = 27.3 bits (59), Expect = 5.1
 Identities = 24/107 (22%), Positives = 43/107 (40%), Gaps = 19/107 (17%)

Query: 15  KTEPRMSSSPHPQREALWTPQTPGAPVHRFFFGEATSPPHTLEGDARVVDQHVQAPVLLA 74
           + +P + ++ H       +PQ PG PV        T+     E + RV         + A
Sbjct: 398 QADPEVGTAAHQTNRQEKSPQDPGDPVQY----NRTTDEELSELEDRV--------AVTA 445

Query: 75  QEVAQGADALQIVDVQLVEARAQALRLQLLYGRLAPRHVPRREHHVP 121
            EV Q    +  ++ ++   RA  L ++       P   PRR+ ++P
Sbjct: 446 SEVQQAESEVSDIESRIAALRAAGLTVK-------PSGKPRRKSNLP 485


>gi|13129108 melanophilin isoform 1 [Homo sapiens]
          Length = 600

 Score = 27.3 bits (59), Expect = 5.1
 Identities = 24/107 (22%), Positives = 43/107 (40%), Gaps = 19/107 (17%)

Query: 15  KTEPRMSSSPHPQREALWTPQTPGAPVHRFFFGEATSPPHTLEGDARVVDQHVQAPVLLA 74
           + +P + ++ H       +PQ PG PV        T+     E + RV         + A
Sbjct: 426 QADPEVGTAAHQTNRQEKSPQDPGDPVQY----NRTTDEELSELEDRV--------AVTA 473

Query: 75  QEVAQGADALQIVDVQLVEARAQALRLQLLYGRLAPRHVPRREHHVP 121
            EV Q    +  ++ ++   RA  L ++       P   PRR+ ++P
Sbjct: 474 SEVQQAESEVSDIESRIAALRAAGLTVK-------PSGKPRRKSNLP 513


>gi|157364926 dystrotelin [Homo sapiens]
          Length = 578

 Score = 27.3 bits (59), Expect = 5.1
 Identities = 17/60 (28%), Positives = 27/60 (45%)

Query: 84  LQIVDVQLVEARAQALRLQLLYGRLAPRHVPRREHHVPREQPAQVAHDGQADALVASSHQ 143
           +Q+  +Q  +   + LR  LL GR   +   RR+  + +  P  V H  QA  L    +Q
Sbjct: 276 IQMSAMQNTKLLFRTLRNNLLQGRCRKKEAARRQQLLDQVNPKGVPHHAQARLLKKQLNQ 335


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.319    0.132    0.394 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,417,365
Number of Sequences: 37866
Number of extensions: 295644
Number of successful extensions: 997
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 20
Number of HSP's that attempted gapping in prelim test: 979
Number of HSP's gapped (non-prelim): 41
length of query: 152
length of database: 18,247,518
effective HSP length: 93
effective length of query: 59
effective length of database: 14,725,980
effective search space: 868832820
effective search space used: 868832820
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 57 (26.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.