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Search of human proteins with 239751973
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239751973 PREDICTED: hypothetical protein XP_002348052 [Homo
sapiens]
(537 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239751973 PREDICTED: hypothetical protein XP_002348052 [Homo ... 1104 0.0
gi|239746455 PREDICTED: hypothetical protein XP_002344215 [Homo ... 1102 0.0
gi|169214772 PREDICTED: similar to hCG1783157 [Homo sapiens] 1093 0.0
gi|226529477 cystatin 9 precursor [Homo sapiens] 56 9e-08
gi|18104940 cystatin 9-like precursor [Homo sapiens] 44 3e-04
gi|4503105 cystatin SA precursor [Homo sapiens] 43 6e-04
gi|4503107 cystatin C precursor [Homo sapiens] 40 0.005
gi|4503109 cystatin S precursor [Homo sapiens] 40 0.005
gi|19882251 cystatin SN precursor [Homo sapiens] 40 0.007
gi|19882256 cystatin D precursor [Homo sapiens] 35 0.17
gi|122937269 Wilms tumor 1 interacting protein [Homo sapiens] 35 0.17
gi|239743164 PREDICTED: hypothetical protein [Homo sapiens] 34 0.39
gi|239508826 PREDICTED: hypothetical protein [Homo sapiens] 34 0.39
gi|157785645 SPEG complex locus [Homo sapiens] 33 0.66
gi|169211489 PREDICTED: hypothetical protein [Homo sapiens] 33 0.86
gi|169210715 PREDICTED: hypothetical protein [Homo sapiens] 33 0.86
gi|148277064 cut-like homeobox 1 isoform a [Homo sapiens] 32 1.1
gi|5032281 dystrophin Dp427c isoform [Homo sapiens] 32 1.9
gi|5032307 dystrophin Dp140c isoform [Homo sapiens] 32 1.9
gi|5032295 dystrophin Dp116 isoform [Homo sapiens] 32 1.9
gi|5032291 dystrophin Dp260-2 isoform [Homo sapiens] 32 1.9
gi|150036268 dystrophin Dp260-1 isoform [Homo sapiens] 32 1.9
gi|5032315 dystrophin Dp427p2 isoform [Homo sapiens] 32 1.9
gi|5032287 dystrophin Dp427p1 isoform [Homo sapiens] 32 1.9
gi|5032313 dystrophin Dp140bc isoform [Homo sapiens] 32 1.9
gi|5032311 dystrophin Dp140ab isoform [Homo sapiens] 32 1.9
gi|5032309 dystrophin Dp140b isoform [Homo sapiens] 32 1.9
gi|5032303 dystrophin Dp71ab isoform [Homo sapiens] 32 1.9
gi|5032301 dystrophin Dp71a isoform [Homo sapiens] 32 1.9
gi|5032299 dystrophin Dp71b isoform [Homo sapiens] 32 1.9
>gi|239751973 PREDICTED: hypothetical protein XP_002348052 [Homo
sapiens]
Length = 537
Score = 1104 bits (2856), Expect = 0.0
Identities = 537/537 (100%), Positives = 537/537 (100%)
Query: 1 MVAAGDTGRLDARTGAFIGEQWGVGTVGRGRLHRKPLSPSLVPGDEFWKIPSLRGQRSRG 60
MVAAGDTGRLDARTGAFIGEQWGVGTVGRGRLHRKPLSPSLVPGDEFWKIPSLRGQRSRG
Sbjct: 1 MVAAGDTGRLDARTGAFIGEQWGVGTVGRGRLHRKPLSPSLVPGDEFWKIPSLRGQRSRG 60
Query: 61 TLQKGVKGGRVNSDTDDSPVPTSPRVASAGLACFGGGGSGEEASERTLWKGSVSTSCLCF 120
TLQKGVKGGRVNSDTDDSPVPTSPRVASAGLACFGGGGSGEEASERTLWKGSVSTSCLCF
Sbjct: 61 TLQKGVKGGRVNSDTDDSPVPTSPRVASAGLACFGGGGSGEEASERTLWKGSVSTSCLCF 120
Query: 121 QDGLNLSGGTKAKQKKLCRTGNVHLRPQWAAHGPSLVSVQTCLASSLRPQVARQEGGTKE 180
QDGLNLSGGTKAKQKKLCRTGNVHLRPQWAAHGPSLVSVQTCLASSLRPQVARQEGGTKE
Sbjct: 121 QDGLNLSGGTKAKQKKLCRTGNVHLRPQWAAHGPSLVSVQTCLASSLRPQVARQEGGTKE 180
Query: 181 AGPGGAGGRSSTGLHWQHYLLVDLVSGPWVLFLSPTCPPGPAWGADTRIPFEKLMEAVAH 240
AGPGGAGGRSSTGLHWQHYLLVDLVSGPWVLFLSPTCPPGPAWGADTRIPFEKLMEAVAH
Sbjct: 181 AGPGGAGGRSSTGLHWQHYLLVDLVSGPWVLFLSPTCPPGPAWGADTRIPFEKLMEAVAH 240
Query: 241 SPENRECAPYGEQASLASVIMLSCLMKTVLLAKLNECSSLDSERIEWAINQEGASLPGEP 300
SPENRECAPYGEQASLASVIMLSCLMKTVLLAKLNECSSLDSERIEWAINQEGASLPGEP
Sbjct: 241 SPENRECAPYGEQASLASVIMLSCLMKTVLLAKLNECSSLDSERIEWAINQEGASLPGEP 300
Query: 301 ANITELRNWLTRGLRDFFFPGEPYMHYVRASQVGSRSPPGLLRAGLQLEEASLKSGYAED 360
ANITELRNWLTRGLRDFFFPGEPYMHYVRASQVGSRSPPGLLRAGLQLEEASLKSGYAED
Sbjct: 301 ANITELRNWLTRGLRDFFFPGEPYMHYVRASQVGSRSPPGLLRAGLQLEEASLKSGYAED 360
Query: 361 SHVVEGAPAHGTYCAEHPHLDHSKIIRRHQYFVASMEFAVAQFNEDNMEEYTHRLLEVQR 420
SHVVEGAPAHGTYCAEHPHLDHSKIIRRHQYFVASMEFAVAQFNEDNMEEYTHRLLEVQR
Sbjct: 361 SHVVEGAPAHGTYCAEHPHLDHSKIIRRHQYFVASMEFAVAQFNEDNMEEYTHRLLEVQR 420
Query: 421 AQQKVSGSHFVHSQNSLHRLNSSKPVVMAAGDLEMGLTICKKYDEDIDNCPLQEGSAEKK 480
AQQKVSGSHFVHSQNSLHRLNSSKPVVMAAGDLEMGLTICKKYDEDIDNCPLQEGSAEKK
Sbjct: 421 AQQKVSGSHFVHSQNSLHRLNSSKPVVMAAGDLEMGLTICKKYDEDIDNCPLQEGSAEKK 480
Query: 481 KLAANSKTSGTRAPGKEQDSARFLSVTGVDDNQWGQKSTFRELHGPSQISWYGGMKG 537
KLAANSKTSGTRAPGKEQDSARFLSVTGVDDNQWGQKSTFRELHGPSQISWYGGMKG
Sbjct: 481 KLAANSKTSGTRAPGKEQDSARFLSVTGVDDNQWGQKSTFRELHGPSQISWYGGMKG 537
>gi|239746455 PREDICTED: hypothetical protein XP_002344215 [Homo
sapiens]
Length = 537
Score = 1102 bits (2849), Expect = 0.0
Identities = 536/537 (99%), Positives = 536/537 (99%)
Query: 1 MVAAGDTGRLDARTGAFIGEQWGVGTVGRGRLHRKPLSPSLVPGDEFWKIPSLRGQRSRG 60
MVAAGDTGRLDARTGAFIGEQWGVGTVGRGRLHRKPLSPSLVPGDEFWKIPSLRGQRSRG
Sbjct: 1 MVAAGDTGRLDARTGAFIGEQWGVGTVGRGRLHRKPLSPSLVPGDEFWKIPSLRGQRSRG 60
Query: 61 TLQKGVKGGRVNSDTDDSPVPTSPRVASAGLACFGGGGSGEEASERTLWKGSVSTSCLCF 120
TLQKGVKGGRVNSDTDDSPVPTSPRVASAGLACFGGGGSGEEASERTLWKGSVSTSCLCF
Sbjct: 61 TLQKGVKGGRVNSDTDDSPVPTSPRVASAGLACFGGGGSGEEASERTLWKGSVSTSCLCF 120
Query: 121 QDGLNLSGGTKAKQKKLCRTGNVHLRPQWAAHGPSLVSVQTCLASSLRPQVARQEGGTKE 180
QDGLNLSGGTKAKQKKLCRTGNVHLRPQWAAHGPSLVSVQTCLASSLRPQVARQEGGTKE
Sbjct: 121 QDGLNLSGGTKAKQKKLCRTGNVHLRPQWAAHGPSLVSVQTCLASSLRPQVARQEGGTKE 180
Query: 181 AGPGGAGGRSSTGLHWQHYLLVDLVSGPWVLFLSPTCPPGPAWGADTRIPFEKLMEAVAH 240
AGPGGAGGRSSTGLHWQHYLLVDLVSGPWVLFLSPTCPPGPAWGADTRIPFEKLMEAVAH
Sbjct: 181 AGPGGAGGRSSTGLHWQHYLLVDLVSGPWVLFLSPTCPPGPAWGADTRIPFEKLMEAVAH 240
Query: 241 SPENRECAPYGEQASLASVIMLSCLMKTVLLAKLNECSSLDSERIEWAINQEGASLPGEP 300
SPENRECAPYGEQASLASVIMLSCLMKTVLLAKLNECSSLDSERIEWAINQEGASLPGEP
Sbjct: 241 SPENRECAPYGEQASLASVIMLSCLMKTVLLAKLNECSSLDSERIEWAINQEGASLPGEP 300
Query: 301 ANITELRNWLTRGLRDFFFPGEPYMHYVRASQVGSRSPPGLLRAGLQLEEASLKSGYAED 360
ANITELRNWLTRGLRDFFFPGEPYMHYVRASQVGSRSPPGLLRAGLQLEEASLKSGYAED
Sbjct: 301 ANITELRNWLTRGLRDFFFPGEPYMHYVRASQVGSRSPPGLLRAGLQLEEASLKSGYAED 360
Query: 361 SHVVEGAPAHGTYCAEHPHLDHSKIIRRHQYFVASMEFAVAQFNEDNMEEYTHRLLEVQR 420
SHVVEGAPAHGTYCAEHPHLDHSK IRRHQYFVASMEFAVAQFNEDNMEEYTHRLLEVQR
Sbjct: 361 SHVVEGAPAHGTYCAEHPHLDHSKRIRRHQYFVASMEFAVAQFNEDNMEEYTHRLLEVQR 420
Query: 421 AQQKVSGSHFVHSQNSLHRLNSSKPVVMAAGDLEMGLTICKKYDEDIDNCPLQEGSAEKK 480
AQQKVSGSHFVHSQNSLHRLNSSKPVVMAAGDLEMGLTICKKYDEDIDNCPLQEGSAEKK
Sbjct: 421 AQQKVSGSHFVHSQNSLHRLNSSKPVVMAAGDLEMGLTICKKYDEDIDNCPLQEGSAEKK 480
Query: 481 KLAANSKTSGTRAPGKEQDSARFLSVTGVDDNQWGQKSTFRELHGPSQISWYGGMKG 537
KLAANSKTSGTRAPGKEQDSARFLSVTGVDDNQWGQKSTFRELHGPSQISWYGGMKG
Sbjct: 481 KLAANSKTSGTRAPGKEQDSARFLSVTGVDDNQWGQKSTFRELHGPSQISWYGGMKG 537
>gi|169214772 PREDICTED: similar to hCG1783157 [Homo sapiens]
Length = 538
Score = 1093 bits (2827), Expect = 0.0
Identities = 534/538 (99%), Positives = 535/538 (99%), Gaps = 1/538 (0%)
Query: 1 MVAAGDTGRLDARTGAFIGEQWGVGTVGRGRLHRKPLSPSLVPGDEFWKIPSLRGQRSRG 60
MVAAGDTGRLDARTGAFIGEQWGVGTVGRGRLHRKPLSPSLVPGDEFWKIPSLRGQRSRG
Sbjct: 1 MVAAGDTGRLDARTGAFIGEQWGVGTVGRGRLHRKPLSPSLVPGDEFWKIPSLRGQRSRG 60
Query: 61 TLQKGVKGGRVNSDTDDSPVPTSPRVASAGLACFGGGGSGEEASERTLWKGSVSTSCLCF 120
TLQKGVKGGRVNSDTDDSPVPTSPRVASAGLACFGGGGSGEEASERTLWKGSVSTSCLCF
Sbjct: 61 TLQKGVKGGRVNSDTDDSPVPTSPRVASAGLACFGGGGSGEEASERTLWKGSVSTSCLCF 120
Query: 121 QDGLNLSGGTKAKQKKLCRTGNVHLRPQWAAHGPSLVSVQTCLASSLRPQVARQEGGTKE 180
QDGLNLSGGTKAKQKKLCRTGNVHLRPQWAAHGPSLVSVQTCLASSLRPQVARQEGGTKE
Sbjct: 121 QDGLNLSGGTKAKQKKLCRTGNVHLRPQWAAHGPSLVSVQTCLASSLRPQVARQEGGTKE 180
Query: 181 AGPGGAGGRSSTGLHWQHYLLVDLVSGPWVLFLSPTCPPGPAWGADTRIPFEKLMEAVAH 240
AGPGGAGGRSSTGLHWQHYLLVDLVSGPWVLFLSPTCPPGPAWGADTRIPFEKLMEAVAH
Sbjct: 181 AGPGGAGGRSSTGLHWQHYLLVDLVSGPWVLFLSPTCPPGPAWGADTRIPFEKLMEAVAH 240
Query: 241 SPENRECAPYGEQASLASVIMLSCLMKTVLLAKLNECSSLDSERIEWAINQEGASLPGEP 300
SPENRECAPYGEQASLASVIMLSCLMKTVLLAKLNECSSLDSERIEWAINQEGASLPGEP
Sbjct: 241 SPENRECAPYGEQASLASVIMLSCLMKTVLLAKLNECSSLDSERIEWAINQEGASLPGEP 300
Query: 301 ANITELRNWLTRGLRDFFFPGEPYMHYVRASQVGSRSPPGLLRAGL-QLEEASLKSGYAE 359
ANITELRNWLTRGLRDFFFPGEPY+HYVRASQVGSRSPPGLLRAGL QLEEASLKSGYAE
Sbjct: 301 ANITELRNWLTRGLRDFFFPGEPYLHYVRASQVGSRSPPGLLRAGLQQLEEASLKSGYAE 360
Query: 360 DSHVVEGAPAHGTYCAEHPHLDHSKIIRRHQYFVASMEFAVAQFNEDNMEEYTHRLLEVQ 419
DSHVVEGAPAHGTYCAEHPHLDHSK IRRHQYFVASMEFAVAQFNEDNMEEYTHRLLEVQ
Sbjct: 361 DSHVVEGAPAHGTYCAEHPHLDHSKRIRRHQYFVASMEFAVAQFNEDNMEEYTHRLLEVQ 420
Query: 420 RAQQKVSGSHFVHSQNSLHRLNSSKPVVMAAGDLEMGLTICKKYDEDIDNCPLQEGSAEK 479
RAQQKVSGSHFVHSQNSLHRLNSSKP VMAAGDLEMGLTICKKYDEDIDNCPLQEGSAEK
Sbjct: 421 RAQQKVSGSHFVHSQNSLHRLNSSKPGVMAAGDLEMGLTICKKYDEDIDNCPLQEGSAEK 480
Query: 480 KKLAANSKTSGTRAPGKEQDSARFLSVTGVDDNQWGQKSTFRELHGPSQISWYGGMKG 537
KKLAANSKTSGTRAPGKEQDSARFLSVTGVDDNQWGQKSTFRELHGPSQISWYGGMKG
Sbjct: 481 KKLAANSKTSGTRAPGKEQDSARFLSVTGVDDNQWGQKSTFRELHGPSQISWYGGMKG 538
>gi|226529477 cystatin 9 precursor [Homo sapiens]
Length = 159
Score = 55.8 bits (133), Expect = 9e-08
Identities = 33/102 (32%), Positives = 59/102 (57%), Gaps = 13/102 (12%)
Query: 373 YCAEHPHLDHSKIIRRHQYFVASMEFAVAQFNEDNMEEYTHRLLEVQRAQQKVSGSHFVH 432
+C+E ++KI++ F+A++EFA+ FN + EE+ +RLL V + +
Sbjct: 29 WCSEEEMGGNNKIVQ-DPMFLATVEFALNTFNVQSKEEHAYRLLRVLSSWR--------- 78
Query: 433 SQNSLHRLNSSKPVVMAAGDLEMGLTICKKYDEDIDNCPLQE 474
++S+ R K V +L++ T+C+K+++DIDNCP QE
Sbjct: 79 -EDSMDRKWRGKMVFSM--NLQLRQTVCRKFEDDIDNCPFQE 117
>gi|18104940 cystatin 9-like precursor [Homo sapiens]
Length = 147
Score = 44.3 bits (103), Expect = 3e-04
Identities = 29/87 (33%), Positives = 42/87 (48%), Gaps = 17/87 (19%)
Query: 390 QYFVASMEFAVAQFNEDNMEEYTHRLLEVQRAQQKVSGSHFVHSQNSLHRLNSSKPVVMA 449
+Y A++EFAV FN+ + + Y +RL H NS SK V
Sbjct: 45 RYLPATVEFAVHTFNQQSKDYYAYRL---------------GHILNSWKEQVESKTVFSM 89
Query: 450 AGDLEMGLTICKKYDEDIDNCPLQEGS 476
+L +G T C K+++DIDNC QE +
Sbjct: 90 --ELLLGRTRCGKFEDDIDNCHFQEST 114
>gi|4503105 cystatin SA precursor [Homo sapiens]
Length = 141
Score = 43.1 bits (100), Expect = 6e-04
Identities = 32/123 (26%), Positives = 56/123 (45%), Gaps = 32/123 (26%)
Query: 359 EDSHVVEGAPAHGTYCAEHPHLDHSKIIRRHQYFVASMEFAVAQFNEDNMEEYTHRLLEV 418
E+ ++EG G Y A+ L+ ++ R ++ F ++++N+ +EY RLL V
Sbjct: 25 EEDRIIEG----GIYDAD---LNDERVQR-------ALHFVISEYNKATEDEYYRRLLRV 70
Query: 419 QRAQQKVSGSHFVHSQNSLHRLNSSKPVVMAAGDLEMGLTICKKYDEDIDNCPLQEGSAE 478
RA++++ G V D+E+G TIC K ++D C E
Sbjct: 71 LRAREQIVGG------------------VNYFFDIEVGRTICTKSQPNLDTCAFHEQPEL 112
Query: 479 KKK 481
+KK
Sbjct: 113 QKK 115
>gi|4503107 cystatin C precursor [Homo sapiens]
Length = 146
Score = 40.0 bits (92), Expect = 0.005
Identities = 23/89 (25%), Positives = 45/89 (50%), Gaps = 22/89 (24%)
Query: 395 SMEFAVAQFNEDNMEEYTHRLLEVQRAQQKVSG--SHFVHSQNSLHRLNSSKPVVMAAGD 452
+++FAV ++N+ + + Y R L+V RA++++ ++F+ D
Sbjct: 52 ALDFAVGEYNKASNDMYHSRALQVVRARKQIVAGVNYFL--------------------D 91
Query: 453 LEMGLTICKKYDEDIDNCPLQEGSAEKKK 481
+E+G T C K ++DNCP + K+K
Sbjct: 92 VELGRTTCTKTQPNLDNCPFHDQPHLKRK 120
>gi|4503109 cystatin S precursor [Homo sapiens]
Length = 141
Score = 40.0 bits (92), Expect = 0.005
Identities = 24/87 (27%), Positives = 41/87 (47%), Gaps = 18/87 (20%)
Query: 395 SMEFAVAQFNEDNMEEYTHRLLEVQRAQQKVSGSHFVHSQNSLHRLNSSKPVVMAAGDLE 454
++ FA++++N+ +EY R L+V RA+++ G V D+E
Sbjct: 47 ALHFAISEYNKATEDEYYRRPLQVLRAREQTFGG------------------VNYFFDVE 88
Query: 455 MGLTICKKYDEDIDNCPLQEGSAEKKK 481
+G TIC K ++D C E +KK
Sbjct: 89 VGRTICTKSQPNLDTCAFHEQPELQKK 115
>gi|19882251 cystatin SN precursor [Homo sapiens]
Length = 141
Score = 39.7 bits (91), Expect = 0.007
Identities = 24/87 (27%), Positives = 40/87 (45%), Gaps = 18/87 (20%)
Query: 395 SMEFAVAQFNEDNMEEYTHRLLEVQRAQQKVSGSHFVHSQNSLHRLNSSKPVVMAAGDLE 454
++ FA++++N+ ++Y R L V RA+Q+ G V D+E
Sbjct: 47 ALHFAISEYNKATKDDYYRRPLRVLRARQQTVGG------------------VNYFFDVE 88
Query: 455 MGLTICKKYDEDIDNCPLQEGSAEKKK 481
+G TIC K ++D C E +KK
Sbjct: 89 VGRTICTKSQPNLDTCAFHEQPELQKK 115
>gi|19882256 cystatin D precursor [Homo sapiens]
Length = 142
Score = 35.0 bits (79), Expect = 0.17
Identities = 21/81 (25%), Positives = 39/81 (48%), Gaps = 19/81 (23%)
Query: 395 SMEFAVAQFNED-NMEEYTHRLLEVQRAQQKVSGSHFVHSQNSLHRLNSSKPVVMAAGDL 453
+++FA++++N+ N +EY R L+V A Q++ G V ++
Sbjct: 47 ALDFAISEYNKVINKDEYYSRPLQVMAAYQQIVGG------------------VNYYFNV 88
Query: 454 EMGLTICKKYDEDIDNCPLQE 474
+ G T C K ++DNCP +
Sbjct: 89 KFGRTTCTKSQPNLDNCPFND 109
>gi|122937269 Wilms tumor 1 interacting protein [Homo sapiens]
Length = 430
Score = 35.0 bits (79), Expect = 0.17
Identities = 31/88 (35%), Positives = 40/88 (45%), Gaps = 12/88 (13%)
Query: 23 GVGTVGRGRLHRKPLSPSLVPGDEFWKIPSLRGQRSRGT------LQKGVKGGRVNSDTD 76
G G+ GRGR +P PGDE RG+ S G L +G +G R + +
Sbjct: 26 GCGSPGRGRRGPRP-----GPGDEAAPALGRRGKGSGGPEAGADGLSRGERGPRRAAVPE 80
Query: 77 DSPVPT-SPRVASAGLACFGGGGSGEEA 103
S P SPR + AG GGGGS +
Sbjct: 81 LSAQPAGSPRASLAGSDGGGGGGSARSS 108
>gi|239743164 PREDICTED: hypothetical protein [Homo sapiens]
Length = 222
Score = 33.9 bits (76), Expect = 0.39
Identities = 42/174 (24%), Positives = 67/174 (38%), Gaps = 15/174 (8%)
Query: 179 KEAGPGGAGGRSSTGLHWQHYLLVDLVSGPWVLFLSPTCPPGPA-W--GADTRIPFEKLM 235
+EAG +GG S W + + +GP F PG A W +++ E
Sbjct: 21 QEAGALDSGGCSEARASWAWRVRCEAETGPVQAFGRQEAGPGEADWRSSSESAEAAESQK 80
Query: 236 EAVAHSPENRECAPYGEQASLASVIMLSCLMKTVLLAKLNECSSLDSERIEWAI--NQEG 293
+ P A E + L L++T + E L R+ WA ++E
Sbjct: 81 WGLGRPPGGMNWAGPKEATGRQEDLGLEILIQTFAPGEAAERPELGLGRMIWACRGHREA 140
Query: 294 ASLPGEPANITELRNWLTRGLRDF-FFPGEPYMHYV------RASQVGSRSPPG 340
++PG+ +T W RG R+ PG+ Y+ V R ++G P G
Sbjct: 141 GAVPGQAYLMTV---WAYRGRREAGAVPGQAYLTTVWSCRGCREEELGLERPTG 191
>gi|239508826 PREDICTED: hypothetical protein [Homo sapiens]
Length = 222
Score = 33.9 bits (76), Expect = 0.39
Identities = 42/174 (24%), Positives = 67/174 (38%), Gaps = 15/174 (8%)
Query: 179 KEAGPGGAGGRSSTGLHWQHYLLVDLVSGPWVLFLSPTCPPGPA-W--GADTRIPFEKLM 235
+EAG +GG S W + + +GP F PG A W +++ E
Sbjct: 21 QEAGALDSGGCSEARASWAWRVRCEAETGPVQAFGRQEAGPGEADWRSSSESAEAAESQK 80
Query: 236 EAVAHSPENRECAPYGEQASLASVIMLSCLMKTVLLAKLNECSSLDSERIEWAI--NQEG 293
+ P A E + L L++T + E L R+ WA ++E
Sbjct: 81 WGLGRPPGGMNWAGPKEATGRQEDLGLEILIQTFAPGEAAERPELGLGRMIWACRGHREA 140
Query: 294 ASLPGEPANITELRNWLTRGLRDF-FFPGEPYMHYV------RASQVGSRSPPG 340
++PG+ +T W RG R+ PG+ Y+ V R ++G P G
Sbjct: 141 GAVPGQAYLMTV---WAYRGRREAGAVPGQAYLTTVWSCRGCREEELGLERPTG 191
>gi|157785645 SPEG complex locus [Homo sapiens]
Length = 3267
Score = 33.1 bits (74), Expect = 0.66
Identities = 36/151 (23%), Positives = 62/151 (41%), Gaps = 15/151 (9%)
Query: 279 SLDSERIEWAINQEGASLPGEPANITELRN--WLTRGLRDFFFPGEPYMHYVRASQVGSR 336
++D + + + + + A +T LR W GLR G ++ V ++ V S
Sbjct: 1312 AIDPDSLTYTVQHQVLGSDQWTALVTGLREPGWAATGLRK----GVQHIFRVLSTTVKSS 1367
Query: 337 SPPG-------LLRAGLQLEEASLKSGYAEDSHVVEGAPAHGTYCAEHPHLDHSKIIRRH 389
S P LL G LEEA + +VVEG PA T H++ + R
Sbjct: 1368 SKPSPPSEPVQLLEHGPTLEEAPAMLDKPDIVYVVEGQPASVT--VTFNHVEAQVVWRSC 1425
Query: 390 QYFVASMEFAVAQFNEDNMEEYTHRLLEVQR 420
+ + V + ++ + ++Y R+ V R
Sbjct: 1426 RGALLEARAGVYELSQPDDDQYCLRICRVSR 1456
>gi|169211489 PREDICTED: hypothetical protein [Homo sapiens]
Length = 176
Score = 32.7 bits (73), Expect = 0.86
Identities = 25/89 (28%), Positives = 41/89 (46%), Gaps = 5/89 (5%)
Query: 216 TCPPGPAWGADT-RIPFEKLMEAVAHSPENREC--APYGEQASLASVIML--SCLMKTVL 270
TCPPGPA + T PF + E +E +P G L ++++L S +K
Sbjct: 11 TCPPGPAPSSPTVSRPFPETTRDAGDKDEGKESFPSPNGALILLPTLLVLDFSSFLKGQR 70
Query: 271 LAKLNECSSLDSERIEWAINQEGASLPGE 299
+ K+++ + + +EW NQ L E
Sbjct: 71 VMKMDQDPPGEVKNMEWHHNQNRRGLRSE 99
>gi|169210715 PREDICTED: hypothetical protein [Homo sapiens]
Length = 176
Score = 32.7 bits (73), Expect = 0.86
Identities = 25/89 (28%), Positives = 41/89 (46%), Gaps = 5/89 (5%)
Query: 216 TCPPGPAWGADT-RIPFEKLMEAVAHSPENREC--APYGEQASLASVIML--SCLMKTVL 270
TCPPGPA + T PF + E +E +P G L ++++L S +K
Sbjct: 11 TCPPGPAPSSPTVSRPFPETTRDAGDKDEGKESFPSPNGALILLPTLLVLDFSSFLKGQR 70
Query: 271 LAKLNECSSLDSERIEWAINQEGASLPGE 299
+ K+++ + + +EW NQ L E
Sbjct: 71 VMKMDQDPPGEVKNMEWHHNQNRRGLRSE 99
>gi|148277064 cut-like homeobox 1 isoform a [Homo sapiens]
Length = 1505
Score = 32.3 bits (72), Expect = 1.1
Identities = 24/69 (34%), Positives = 30/69 (43%), Gaps = 1/69 (1%)
Query: 123 GLNLSGGTKAKQKKLCRTGN-VHLRPQWAAHGPSLVSVQTCLASSLRPQVARQEGGTKEA 181
GL+ G Q L + N V W H S V + A+S A + GG KE
Sbjct: 793 GLDPQGAADCAQGVLRQVKNEVGRSGAWKDHWWSAVQPERRNAASSEEAKAEETGGGKEK 852
Query: 182 GPGGAGGRS 190
G GG+GG S
Sbjct: 853 GSGGSGGGS 861
>gi|5032281 dystrophin Dp427c isoform [Homo sapiens]
Length = 3677
Score = 31.6 bits (70), Expect = 1.9
Identities = 19/69 (27%), Positives = 39/69 (56%), Gaps = 4/69 (5%)
Query: 383 SKIIRRHQYFVASMEFAVAQFNEDNMEEYTHRL---LEVQRAQQKVSGSHFVHSQNSLHR 439
+K++R+H+ + + + + + +E HRL LE +A+ KV+G+ SL R
Sbjct: 3554 AKLLRQHKGRLEA-RMQILEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTVSSPSTSLQR 3612
Query: 440 LNSSKPVVM 448
+SS+P+++
Sbjct: 3613 SDSSQPMLL 3621
>gi|5032307 dystrophin Dp140c isoform [Homo sapiens]
Length = 1105
Score = 31.6 bits (70), Expect = 1.9
Identities = 19/69 (27%), Positives = 39/69 (56%), Gaps = 4/69 (5%)
Query: 383 SKIIRRHQYFVASMEFAVAQFNEDNMEEYTHRL---LEVQRAQQKVSGSHFVHSQNSLHR 439
+K++R+H+ + + + + + +E HRL LE +A+ KV+G+ SL R
Sbjct: 982 AKLLRQHKGRLEA-RMQILEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTVSSPSTSLQR 1040
Query: 440 LNSSKPVVM 448
+SS+P+++
Sbjct: 1041 SDSSQPMLL 1049
>gi|5032295 dystrophin Dp116 isoform [Homo sapiens]
Length = 956
Score = 31.6 bits (70), Expect = 1.9
Identities = 19/69 (27%), Positives = 39/69 (56%), Gaps = 4/69 (5%)
Query: 383 SKIIRRHQYFVASMEFAVAQFNEDNMEEYTHRL---LEVQRAQQKVSGSHFVHSQNSLHR 439
+K++R+H+ + + + + + +E HRL LE +A+ KV+G+ SL R
Sbjct: 833 AKLLRQHKGRLEA-RMQILEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTVSSPSTSLQR 891
Query: 440 LNSSKPVVM 448
+SS+P+++
Sbjct: 892 SDSSQPMLL 900
>gi|5032291 dystrophin Dp260-2 isoform [Homo sapiens]
Length = 2341
Score = 31.6 bits (70), Expect = 1.9
Identities = 19/69 (27%), Positives = 39/69 (56%), Gaps = 4/69 (5%)
Query: 383 SKIIRRHQYFVASMEFAVAQFNEDNMEEYTHRL---LEVQRAQQKVSGSHFVHSQNSLHR 439
+K++R+H+ + + + + + +E HRL LE +A+ KV+G+ SL R
Sbjct: 2218 AKLLRQHKGRLEA-RMQILEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTVSSPSTSLQR 2276
Query: 440 LNSSKPVVM 448
+SS+P+++
Sbjct: 2277 SDSSQPMLL 2285
>gi|150036268 dystrophin Dp260-1 isoform [Homo sapiens]
Length = 2344
Score = 31.6 bits (70), Expect = 1.9
Identities = 19/69 (27%), Positives = 39/69 (56%), Gaps = 4/69 (5%)
Query: 383 SKIIRRHQYFVASMEFAVAQFNEDNMEEYTHRL---LEVQRAQQKVSGSHFVHSQNSLHR 439
+K++R+H+ + + + + + +E HRL LE +A+ KV+G+ SL R
Sbjct: 2221 AKLLRQHKGRLEA-RMQILEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTVSSPSTSLQR 2279
Query: 440 LNSSKPVVM 448
+SS+P+++
Sbjct: 2280 SDSSQPMLL 2288
>gi|5032315 dystrophin Dp427p2 isoform [Homo sapiens]
Length = 3562
Score = 31.6 bits (70), Expect = 1.9
Identities = 19/69 (27%), Positives = 39/69 (56%), Gaps = 4/69 (5%)
Query: 383 SKIIRRHQYFVASMEFAVAQFNEDNMEEYTHRL---LEVQRAQQKVSGSHFVHSQNSLHR 439
+K++R+H+ + + + + + +E HRL LE +A+ KV+G+ SL R
Sbjct: 3439 AKLLRQHKGRLEA-RMQILEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTVSSPSTSLQR 3497
Query: 440 LNSSKPVVM 448
+SS+P+++
Sbjct: 3498 SDSSQPMLL 3506
>gi|5032287 dystrophin Dp427p1 isoform [Homo sapiens]
Length = 3681
Score = 31.6 bits (70), Expect = 1.9
Identities = 19/69 (27%), Positives = 39/69 (56%), Gaps = 4/69 (5%)
Query: 383 SKIIRRHQYFVASMEFAVAQFNEDNMEEYTHRL---LEVQRAQQKVSGSHFVHSQNSLHR 439
+K++R+H+ + + + + + +E HRL LE +A+ KV+G+ SL R
Sbjct: 3558 AKLLRQHKGRLEA-RMQILEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTVSSPSTSLQR 3616
Query: 440 LNSSKPVVM 448
+SS+P+++
Sbjct: 3617 SDSSQPMLL 3625
>gi|5032313 dystrophin Dp140bc isoform [Homo sapiens]
Length = 1133
Score = 31.6 bits (70), Expect = 1.9
Identities = 19/69 (27%), Positives = 39/69 (56%), Gaps = 4/69 (5%)
Query: 383 SKIIRRHQYFVASMEFAVAQFNEDNMEEYTHRL---LEVQRAQQKVSGSHFVHSQNSLHR 439
+K++R+H+ + + + + + +E HRL LE +A+ KV+G+ SL R
Sbjct: 992 AKLLRQHKGRLEA-RMQILEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTVSSPSTSLQR 1050
Query: 440 LNSSKPVVM 448
+SS+P+++
Sbjct: 1051 SDSSQPMLL 1059
>gi|5032311 dystrophin Dp140ab isoform [Homo sapiens]
Length = 1230
Score = 31.6 bits (70), Expect = 1.9
Identities = 19/69 (27%), Positives = 39/69 (56%), Gaps = 4/69 (5%)
Query: 383 SKIIRRHQYFVASMEFAVAQFNEDNMEEYTHRL---LEVQRAQQKVSGSHFVHSQNSLHR 439
+K++R+H+ + + + + + +E HRL LE +A+ KV+G+ SL R
Sbjct: 1089 AKLLRQHKGRLEA-RMQILEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTVSSPSTSLQR 1147
Query: 440 LNSSKPVVM 448
+SS+P+++
Sbjct: 1148 SDSSQPMLL 1156
>gi|5032309 dystrophin Dp140b isoform [Homo sapiens]
Length = 1243
Score = 31.6 bits (70), Expect = 1.9
Identities = 19/69 (27%), Positives = 39/69 (56%), Gaps = 4/69 (5%)
Query: 383 SKIIRRHQYFVASMEFAVAQFNEDNMEEYTHRL---LEVQRAQQKVSGSHFVHSQNSLHR 439
+K++R+H+ + + + + + +E HRL LE +A+ KV+G+ SL R
Sbjct: 1102 AKLLRQHKGRLEA-RMQILEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTVSSPSTSLQR 1160
Query: 440 LNSSKPVVM 448
+SS+P+++
Sbjct: 1161 SDSSQPMLL 1169
>gi|5032303 dystrophin Dp71ab isoform [Homo sapiens]
Length = 622
Score = 31.6 bits (70), Expect = 1.9
Identities = 19/69 (27%), Positives = 39/69 (56%), Gaps = 4/69 (5%)
Query: 383 SKIIRRHQYFVASMEFAVAQFNEDNMEEYTHRL---LEVQRAQQKVSGSHFVHSQNSLHR 439
+K++R+H+ + + + + + +E HRL LE +A+ KV+G+ SL R
Sbjct: 481 AKLLRQHKGRLEA-RMQILEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTVSSPSTSLQR 539
Query: 440 LNSSKPVVM 448
+SS+P+++
Sbjct: 540 SDSSQPMLL 548
>gi|5032301 dystrophin Dp71a isoform [Homo sapiens]
Length = 604
Score = 31.6 bits (70), Expect = 1.9
Identities = 19/69 (27%), Positives = 39/69 (56%), Gaps = 4/69 (5%)
Query: 383 SKIIRRHQYFVASMEFAVAQFNEDNMEEYTHRL---LEVQRAQQKVSGSHFVHSQNSLHR 439
+K++R+H+ + + + + + +E HRL LE +A+ KV+G+ SL R
Sbjct: 481 AKLLRQHKGRLEA-RMQILEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTVSSPSTSLQR 539
Query: 440 LNSSKPVVM 448
+SS+P+++
Sbjct: 540 SDSSQPMLL 548
>gi|5032299 dystrophin Dp71b isoform [Homo sapiens]
Length = 635
Score = 31.6 bits (70), Expect = 1.9
Identities = 19/69 (27%), Positives = 39/69 (56%), Gaps = 4/69 (5%)
Query: 383 SKIIRRHQYFVASMEFAVAQFNEDNMEEYTHRL---LEVQRAQQKVSGSHFVHSQNSLHR 439
+K++R+H+ + + + + + +E HRL LE +A+ KV+G+ SL R
Sbjct: 494 AKLLRQHKGRLEA-RMQILEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTVSSPSTSLQR 552
Query: 440 LNSSKPVVM 448
+SS+P+++
Sbjct: 553 SDSSQPMLL 561
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.315 0.132 0.407
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23,903,944
Number of Sequences: 37866
Number of extensions: 1211491
Number of successful extensions: 3872
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 58
Number of HSP's that attempted gapping in prelim test: 3834
Number of HSP's gapped (non-prelim): 89
length of query: 537
length of database: 18,247,518
effective HSP length: 107
effective length of query: 430
effective length of database: 14,195,856
effective search space: 6104218080
effective search space used: 6104218080
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.