Search of human proteins with 117606370

Search of human proteins with 117606370

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|117606370 UMP-CMP kinase 2 [Homo sapiens]
         (449 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|117606370 UMP-CMP kinase 2 [Homo sapiens]                          912   0.0  
gi|92859641 thymidine kinase 2, mitochondrial [Homo sapiens]           38   0.021
gi|27777632 solute carrier family 9, isoform A1 [Homo sapiens]         33   0.40 
gi|239755569 PREDICTED: hypothetical protein XP_002344623 [Homo ...    33   0.69 
gi|239750111 PREDICTED: hypothetical protein [Homo sapiens]            33   0.69 
gi|239744419 PREDICTED: hypothetical protein XP_002343139 [Homo ...    33   0.69 
gi|9558729 golgi associated, gamma adaptin ear containing, ARF b...    32   1.2  
gi|122937257 thrombospondin, type I, domain containing 7B [Homo ...    32   1.2  
gi|239757128 PREDICTED: similar to mCG141871 [Homo sapiens]            32   1.5  
gi|113428456 PREDICTED: similar to mCG141871 [Homo sapiens]            32   1.5  
gi|113428072 PREDICTED: similar to mCG141871 [Homo sapiens]            32   1.5  
gi|149158690 HLA-B associated transcript-2 [Homo sapiens]              31   2.0  
gi|113205075 amyotrophic lateral sclerosis 2 (juvenile) chromoso...    31   2.0  
gi|113205077 amyotrophic lateral sclerosis 2 (juvenile) chromoso...    31   2.0  
gi|167857786 mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acety...    31   2.6  
gi|167857784 mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acety...    31   2.6  
gi|167857782 mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acety...    31   2.6  
gi|167857780 mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acety...    31   2.6  
gi|167857778 mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acety...    31   2.6  
gi|134031945 SCO-spondin [Homo sapiens]                                31   2.6  
gi|22094987 raptor isoform 1 [Homo sapiens]                            30   4.4  
gi|251823858 raptor isoform 2 [Homo sapiens]                           30   4.4  
gi|48527952 golgi associated, gamma adaptin ear containing, ARF ...    30   4.4  
gi|197209826 chromosome 2 open reading frame 21 isoform 1 [Homo ...    30   5.8  
gi|169167792 PREDICTED: similar to hCG1745223 [Homo sapiens]           29   7.6  
gi|88987622 PREDICTED: similar to hCG1745223 [Homo sapiens]            29   7.6  
gi|51464815 PREDICTED: similar to hCG1745223 [Homo sapiens]            29   7.6  
gi|121674801 hepatocyte cell adhesion molecule [Homo sapiens]          29   7.6  
gi|58331144 proline rich region 18 [Homo sapiens]                      29   7.6  
gi|218083800 Rho GTPase-activating protein isoform 1 [Homo sapiens]    29   7.6  

>gi|117606370 UMP-CMP kinase 2 [Homo sapiens]
          Length = 449

 Score =  912 bits (2358), Expect = 0.0
 Identities = 449/449 (100%), Positives = 449/449 (100%)

Query: 1   MAFARRLLRGPLSGPLLGRRGVCAGAMAPPRRFVLELPDCTLAHFALGADAPGDADAPDP 60
           MAFARRLLRGPLSGPLLGRRGVCAGAMAPPRRFVLELPDCTLAHFALGADAPGDADAPDP
Sbjct: 1   MAFARRLLRGPLSGPLLGRRGVCAGAMAPPRRFVLELPDCTLAHFALGADAPGDADAPDP 60

Query: 61  RLAALLGPPERSYSLCVPVTPDAGCGARVRAARLHQRLLHQLRRGPFQRCQLLRLLCYCP 120
           RLAALLGPPERSYSLCVPVTPDAGCGARVRAARLHQRLLHQLRRGPFQRCQLLRLLCYCP
Sbjct: 61  RLAALLGPPERSYSLCVPVTPDAGCGARVRAARLHQRLLHQLRRGPFQRCQLLRLLCYCP 120

Query: 121 GGQAGGAQQGFLLRDPLDDPDTRQALLELLGACQEAPRPHLGEFEADPRGQLWQRLWEVQ 180
           GGQAGGAQQGFLLRDPLDDPDTRQALLELLGACQEAPRPHLGEFEADPRGQLWQRLWEVQ
Sbjct: 121 GGQAGGAQQGFLLRDPLDDPDTRQALLELLGACQEAPRPHLGEFEADPRGQLWQRLWEVQ 180

Query: 181 DGRRLQVGCAQVVPVPEPPLHPVVPDLPSSVVFPDREAARAVLEECTSFIPEARAVLDLV 240
           DGRRLQVGCAQVVPVPEPPLHPVVPDLPSSVVFPDREAARAVLEECTSFIPEARAVLDLV
Sbjct: 181 DGRRLQVGCAQVVPVPEPPLHPVVPDLPSSVVFPDREAARAVLEECTSFIPEARAVLDLV 240

Query: 241 DQCPKQIQKGKFQVVAIEGLDATGKTTVTQSVADSLKAVLLKSPPSCIGQWRKIFDDEPT 300
           DQCPKQIQKGKFQVVAIEGLDATGKTTVTQSVADSLKAVLLKSPPSCIGQWRKIFDDEPT
Sbjct: 241 DQCPKQIQKGKFQVVAIEGLDATGKTTVTQSVADSLKAVLLKSPPSCIGQWRKIFDDEPT 300

Query: 301 IIRRAFYSLGNYIVASEIAKESAKSPVIVDRYWHSTATYAIATEVSGGLQHLPPAHHPVY 360
           IIRRAFYSLGNYIVASEIAKESAKSPVIVDRYWHSTATYAIATEVSGGLQHLPPAHHPVY
Sbjct: 301 IIRRAFYSLGNYIVASEIAKESAKSPVIVDRYWHSTATYAIATEVSGGLQHLPPAHHPVY 360

Query: 361 QWPEDLLKPDLILLLTVSPEERLQRLQGRGMEKTREEAELEANSVFRQKVEMSYQRMENP 420
           QWPEDLLKPDLILLLTVSPEERLQRLQGRGMEKTREEAELEANSVFRQKVEMSYQRMENP
Sbjct: 361 QWPEDLLKPDLILLLTVSPEERLQRLQGRGMEKTREEAELEANSVFRQKVEMSYQRMENP 420

Query: 421 GCHVVDASPSREKVLQTVLSLIQNSFSEP 449
           GCHVVDASPSREKVLQTVLSLIQNSFSEP
Sbjct: 421 GCHVVDASPSREKVLQTVLSLIQNSFSEP 449


>gi|92859641 thymidine kinase 2, mitochondrial [Homo sapiens]
          Length = 307

 Score = 37.7 bits (86), Expect = 0.021
 Identities = 39/165 (23%), Positives = 73/165 (44%), Gaps = 19/165 (11%)

Query: 245 KQIQKGKFQVVAIEGLDATGKTTVTQSVADSLKAVLLKSPPSCIGQWRKIFDDEPTII-- 302
           K+ +K K  V+ +EG  A+GKTT  +  +++    +L  P   + +WR +    P  +  
Sbjct: 85  KEQEKEKKSVICVEGNIASGKTTCLEFFSNATDVEVLTEP---VSKWRNVRGHNPLGLMY 141

Query: 303 ---RRAFYSLGNYIVASEI---AKESAKSPVIVDRYWHSTATYAIATEVSGGLQHLPPAH 356
               R   +L  Y+  + +    +    S  +++R  HS     +      G   +P   
Sbjct: 142 HDASRWGLTLQTYVQLTMLDRHTRPQVSSVRLMERSIHSARYIFVENLYRSG--KMPEVD 199

Query: 357 HPVY-QWPEDLLK-----PDLILLLTVSPEERLQRLQGRGMEKTR 395
           + V  +W + +L+      DLI+ L  +PE   QRL+ R  E+ +
Sbjct: 200 YVVLSEWFDWILRNMDVSVDLIVYLRTNPETCYQRLKKRCREEEK 244


>gi|27777632 solute carrier family 9, isoform A1 [Homo sapiens]
          Length = 815

 Score = 33.5 bits (75), Expect = 0.40
 Identities = 23/88 (26%), Positives = 40/88 (45%), Gaps = 3/88 (3%)

Query: 312 YIVASEIAKESAKSPVIVDRYWHSTATYAIATEVSGGLQHLPPAHHPVYQ---WPEDLLK 368
           Y+    IA E +K P ++  Y       AI    SGG+  +P A   V      P+ L  
Sbjct: 557 YVKKCLIAGERSKEPQLIAFYHKMEMKQAIELVESGGMGKIPSAVSTVSMQNIHPKSLPS 616

Query: 369 PDLILLLTVSPEERLQRLQGRGMEKTRE 396
             ++  L+   EE ++++    ++KTR+
Sbjct: 617 ERILPALSKDKEEEIRKILRNNLQKTRQ 644


>gi|239755569 PREDICTED: hypothetical protein XP_002344623 [Homo
           sapiens]
          Length = 175

 Score = 32.7 bits (73), Expect = 0.69
 Identities = 15/51 (29%), Positives = 27/51 (52%), Gaps = 3/51 (5%)

Query: 189 CAQVVPVPEPPLHPVVPDLPSSVVFPDREAARAVLEECTSFIPEARAVLDL 239
           C    P P  P+HP++P  P+ +V   +   + V+++   F+ EA   L+L
Sbjct: 11  CPSCPPCPPAPVHPLIPPTPAHLV---QVLGQCVVQKLLVFLQEAAQALEL 58


>gi|239750111 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 175

 Score = 32.7 bits (73), Expect = 0.69
 Identities = 15/51 (29%), Positives = 27/51 (52%), Gaps = 3/51 (5%)

Query: 189 CAQVVPVPEPPLHPVVPDLPSSVVFPDREAARAVLEECTSFIPEARAVLDL 239
           C    P P  P+HP++P  P+ +V   +   + V+++   F+ EA   L+L
Sbjct: 11  CPSCPPCPPAPVHPLIPPTPAHLV---QVLGQCVVQKLLVFLQEAAQALEL 58


>gi|239744419 PREDICTED: hypothetical protein XP_002343139 [Homo
           sapiens]
          Length = 175

 Score = 32.7 bits (73), Expect = 0.69
 Identities = 15/51 (29%), Positives = 27/51 (52%), Gaps = 3/51 (5%)

Query: 189 CAQVVPVPEPPLHPVVPDLPSSVVFPDREAARAVLEECTSFIPEARAVLDL 239
           C    P P  P+HP++P  P+ +V   +   + V+++   F+ EA   L+L
Sbjct: 11  CPSCPPCPPAPVHPLIPPTPAHLV---QVLGQCVVQKLLVFLQEAAQALEL 58


>gi|9558729 golgi associated, gamma adaptin ear containing, ARF
           binding protein 1 isoform 1 [Homo sapiens]
          Length = 639

 Score = 32.0 bits (71), Expect = 1.2
 Identities = 29/144 (20%), Positives = 63/144 (43%), Gaps = 6/144 (4%)

Query: 195 VPEPPLHPVVPDLPSSVVFPDREAARAVLEECTSFIPE-----ARAVLDLVDQCPKQIQK 249
           +P+    P+ P  P +V+F D E ++ +     S  PE      + + ++V +  K+++K
Sbjct: 151 LPDDTTFPLPPPRPKNVIFEDEEKSKMLARLLKSSHPEDLRAANKLIKEMVQEDQKRMEK 210

Query: 250 GKFQVVAIEGLDATGKTTVTQSVADSLKAVLLKSPPSCIGQ-WRKIFDDEPTIIRRAFYS 308
              +V AIE ++   K      ++ S       S    + + +++     PT+ R A  +
Sbjct: 211 ISKRVNAIEEVNNNVKLLTEMVMSHSQGGAAAGSSEDLMKELYQRCERMRPTLFRLASDT 270

Query: 309 LGNYIVASEIAKESAKSPVIVDRY 332
             N    +EI + +     +++ Y
Sbjct: 271 EDNDEALAEILQANDNLTQVINLY 294


>gi|122937257 thrombospondin, type I, domain containing 7B [Homo
           sapiens]
          Length = 1577

 Score = 32.0 bits (71), Expect = 1.2
 Identities = 24/102 (23%), Positives = 41/102 (40%), Gaps = 4/102 (3%)

Query: 26  AMAPPRRFVLELP---DCTLAHFALGAD-APGDADAPDPRLAALLGPPERSYSLCVPVTP 81
           A+ PP      +P   DC ++ F   ++ + G       R  A++ PP      C  +T 
Sbjct: 132 ALQPPTEQACLIPCPRDCVVSEFLPWSNCSKGCGKKLQHRTRAVIAPPLFGGLQCPNLTE 191

Query: 82  DAGCGARVRAARLHQRLLHQLRRGPFQRCQLLRLLCYCPGGQ 123
              C A +      +     L+ GP+ +C+L  L    P G+
Sbjct: 192 SRACDAPISCPLGEEEYTFSLKVGPWSKCRLPHLKEINPSGR 233


>gi|239757128 PREDICTED: similar to mCG141871 [Homo sapiens]
          Length = 306

 Score = 31.6 bits (70), Expect = 1.5
 Identities = 37/113 (32%), Positives = 41/113 (36%), Gaps = 12/113 (10%)

Query: 3   FARRLLRGPLSGPLLGRRGVCAGAMAPPRRFVLELPDCTLAHFALGADAPGDADAPDPRL 62
           F RR   GPL  P   R  V A    P  R+ L L  C++         P    AP P L
Sbjct: 74  FPRRA--GPLEVPADSRVFVQAALARPSPRWGLALHRCSV--------TPSSRPAPGPAL 123

Query: 63  AALLGPPERSYSLCVPVTPDAGCGARVRAARLHQRLLHQLRRG-PFQRCQLLR 114
           A L        S+  P  P    GA  R AR   RL         F  CQL R
Sbjct: 124 ALLREGCPADTSVAFPPPPPPSPGA-ARPARFSFRLRPVFNASVQFLHCQLSR 175


>gi|113428456 PREDICTED: similar to mCG141871 [Homo sapiens]
          Length = 358

 Score = 31.6 bits (70), Expect = 1.5
 Identities = 37/113 (32%), Positives = 41/113 (36%), Gaps = 12/113 (10%)

Query: 3   FARRLLRGPLSGPLLGRRGVCAGAMAPPRRFVLELPDCTLAHFALGADAPGDADAPDPRL 62
           F RR   GPL  P   R  V A    P  R+ L L  C++         P    AP P L
Sbjct: 126 FPRRA--GPLEVPADSRVFVQAALARPSPRWGLALHRCSV--------TPSSRPAPGPAL 175

Query: 63  AALLGPPERSYSLCVPVTPDAGCGARVRAARLHQRLLHQLRRG-PFQRCQLLR 114
           A L        S+  P  P    GA  R AR   RL         F  CQL R
Sbjct: 176 ALLREGCPADTSVAFPPPPPPSPGA-ARPARFSFRLRPVFNASVQFLHCQLSR 227


>gi|113428072 PREDICTED: similar to mCG141871 [Homo sapiens]
          Length = 358

 Score = 31.6 bits (70), Expect = 1.5
 Identities = 37/113 (32%), Positives = 41/113 (36%), Gaps = 12/113 (10%)

Query: 3   FARRLLRGPLSGPLLGRRGVCAGAMAPPRRFVLELPDCTLAHFALGADAPGDADAPDPRL 62
           F RR   GPL  P   R  V A    P  R+ L L  C++         P    AP P L
Sbjct: 126 FPRRA--GPLEVPADSRVFVQAALARPSPRWGLALHRCSV--------TPSSRPAPGPAL 175

Query: 63  AALLGPPERSYSLCVPVTPDAGCGARVRAARLHQRLLHQLRRG-PFQRCQLLR 114
           A L        S+  P  P    GA  R AR   RL         F  CQL R
Sbjct: 176 ALLREGCPADTSVAFPPPPPPSPGA-ARPARFSFRLRPVFNASVQFLHCQLSR 227


>gi|149158690 HLA-B associated transcript-2 [Homo sapiens]
          Length = 2157

 Score = 31.2 bits (69), Expect = 2.0
 Identities = 28/91 (30%), Positives = 37/91 (40%), Gaps = 5/91 (5%)

Query: 28   APPRRFVLELPDCTLAHFALGADAPGDADAPDPRLAALLGPPERSYSLCV-----PVTPD 82
            AP ++ +L + D  L     G+  P    AP P     +GP  +  SL V     P T  
Sbjct: 1974 APAQQMLLPMVDSQLPVVNFGSLPPAPPPAPPPLSLLPVGPALQPPSLAVRPPPAPATRV 2033

Query: 83   AGCGARVRAARLHQRLLHQLRRGPFQRCQLL 113
                AR   A L +  LH +   PFQ  Q L
Sbjct: 2034 LPSPARPFPASLGRAELHPVELKPFQDYQKL 2064


>gi|113205075 amyotrophic lateral sclerosis 2 (juvenile) chromosome
           region, candidate 4 isoform a [Homo sapiens]
          Length = 408

 Score = 31.2 bits (69), Expect = 2.0
 Identities = 22/58 (37%), Positives = 30/58 (51%), Gaps = 8/58 (13%)

Query: 379 PEERLQRLQGRGMEKTREEAELEANSVFRQKVEMSYQRMENPGCHVVDASPSREKVLQ 436
           PE  +QR Q    +KTR   ELE +S  ++    S  R EN     +DA P+ E V+Q
Sbjct: 76  PEAPVQRRQ----KKTRLPLELETSSTQKKSSSSSLLRNENG----IDAEPAEEAVIQ 125


>gi|113205077 amyotrophic lateral sclerosis 2 (juvenile) chromosome
           region, candidate 4 isoform b [Homo sapiens]
          Length = 400

 Score = 31.2 bits (69), Expect = 2.0
 Identities = 22/58 (37%), Positives = 30/58 (51%), Gaps = 8/58 (13%)

Query: 379 PEERLQRLQGRGMEKTREEAELEANSVFRQKVEMSYQRMENPGCHVVDASPSREKVLQ 436
           PE  +QR Q    +KTR   ELE +S  ++    S  R EN     +DA P+ E V+Q
Sbjct: 68  PEAPVQRRQ----KKTRLPLELETSSTQKKSSSSSLLRNENG----IDAEPAEEAVIQ 117


>gi|167857786 mannosyl (alpha-1,3-)-glycoprotein
           beta-1,2-N-acetylglucosaminyltransferase [Homo sapiens]
          Length = 445

 Score = 30.8 bits (68), Expect = 2.6
 Identities = 28/110 (25%), Positives = 43/110 (39%), Gaps = 18/110 (16%)

Query: 139 DPDTRQALLELLGACQEAPRPHLGEFEADPRGQLWQRLWEVQDGRRLQVGCAQVVPVPEP 198
           D D      E++   Q+A      E E + +  L Q++ +    +R +V      P   P
Sbjct: 44  DGDPASLTREVIRLAQDA------EVELERQRGLLQQIGDALSSQRGRV------PTAAP 91

Query: 199 PLHPVVPDLPSSVVFP------DREAARAVLEECTSFIPEARAVLDLVDQ 242
           P  P VP  P+  V P      DR   R  L++   + P A     +V Q
Sbjct: 92  PAQPRVPVTPAPAVIPILVIACDRSTVRRCLDKLLHYRPSAELFPIIVSQ 141


>gi|167857784 mannosyl (alpha-1,3-)-glycoprotein
           beta-1,2-N-acetylglucosaminyltransferase [Homo sapiens]
          Length = 445

 Score = 30.8 bits (68), Expect = 2.6
 Identities = 28/110 (25%), Positives = 43/110 (39%), Gaps = 18/110 (16%)

Query: 139 DPDTRQALLELLGACQEAPRPHLGEFEADPRGQLWQRLWEVQDGRRLQVGCAQVVPVPEP 198
           D D      E++   Q+A      E E + +  L Q++ +    +R +V      P   P
Sbjct: 44  DGDPASLTREVIRLAQDA------EVELERQRGLLQQIGDALSSQRGRV------PTAAP 91

Query: 199 PLHPVVPDLPSSVVFP------DREAARAVLEECTSFIPEARAVLDLVDQ 242
           P  P VP  P+  V P      DR   R  L++   + P A     +V Q
Sbjct: 92  PAQPRVPVTPAPAVIPILVIACDRSTVRRCLDKLLHYRPSAELFPIIVSQ 141


>gi|167857782 mannosyl (alpha-1,3-)-glycoprotein
           beta-1,2-N-acetylglucosaminyltransferase [Homo sapiens]
          Length = 445

 Score = 30.8 bits (68), Expect = 2.6
 Identities = 28/110 (25%), Positives = 43/110 (39%), Gaps = 18/110 (16%)

Query: 139 DPDTRQALLELLGACQEAPRPHLGEFEADPRGQLWQRLWEVQDGRRLQVGCAQVVPVPEP 198
           D D      E++   Q+A      E E + +  L Q++ +    +R +V      P   P
Sbjct: 44  DGDPASLTREVIRLAQDA------EVELERQRGLLQQIGDALSSQRGRV------PTAAP 91

Query: 199 PLHPVVPDLPSSVVFP------DREAARAVLEECTSFIPEARAVLDLVDQ 242
           P  P VP  P+  V P      DR   R  L++   + P A     +V Q
Sbjct: 92  PAQPRVPVTPAPAVIPILVIACDRSTVRRCLDKLLHYRPSAELFPIIVSQ 141


>gi|167857780 mannosyl (alpha-1,3-)-glycoprotein
           beta-1,2-N-acetylglucosaminyltransferase [Homo sapiens]
          Length = 445

 Score = 30.8 bits (68), Expect = 2.6
 Identities = 28/110 (25%), Positives = 43/110 (39%), Gaps = 18/110 (16%)

Query: 139 DPDTRQALLELLGACQEAPRPHLGEFEADPRGQLWQRLWEVQDGRRLQVGCAQVVPVPEP 198
           D D      E++   Q+A      E E + +  L Q++ +    +R +V      P   P
Sbjct: 44  DGDPASLTREVIRLAQDA------EVELERQRGLLQQIGDALSSQRGRV------PTAAP 91

Query: 199 PLHPVVPDLPSSVVFP------DREAARAVLEECTSFIPEARAVLDLVDQ 242
           P  P VP  P+  V P      DR   R  L++   + P A     +V Q
Sbjct: 92  PAQPRVPVTPAPAVIPILVIACDRSTVRRCLDKLLHYRPSAELFPIIVSQ 141


>gi|167857778 mannosyl (alpha-1,3-)-glycoprotein
           beta-1,2-N-acetylglucosaminyltransferase [Homo sapiens]
          Length = 445

 Score = 30.8 bits (68), Expect = 2.6
 Identities = 28/110 (25%), Positives = 43/110 (39%), Gaps = 18/110 (16%)

Query: 139 DPDTRQALLELLGACQEAPRPHLGEFEADPRGQLWQRLWEVQDGRRLQVGCAQVVPVPEP 198
           D D      E++   Q+A      E E + +  L Q++ +    +R +V      P   P
Sbjct: 44  DGDPASLTREVIRLAQDA------EVELERQRGLLQQIGDALSSQRGRV------PTAAP 91

Query: 199 PLHPVVPDLPSSVVFP------DREAARAVLEECTSFIPEARAVLDLVDQ 242
           P  P VP  P+  V P      DR   R  L++   + P A     +V Q
Sbjct: 92  PAQPRVPVTPAPAVIPILVIACDRSTVRRCLDKLLHYRPSAELFPIIVSQ 141


>gi|134031945 SCO-spondin [Homo sapiens]
          Length = 5147

 Score = 30.8 bits (68), Expect = 2.6
 Identities = 16/44 (36%), Positives = 19/44 (43%), Gaps = 9/44 (20%)

Query: 96  QRLLHQLRRGPFQRCQL---------LRLLCYCPGGQAGGAQQG 130
           Q + HQL  GPF +C             L  YC G  AG  Q+G
Sbjct: 391 QDVCHQLLEGPFGQCHAQVSPAEYHEACLFAYCAGAMAGSGQEG 434


>gi|22094987 raptor isoform 1 [Homo sapiens]
          Length = 1335

 Score = 30.0 bits (66), Expect = 4.4
 Identities = 19/65 (29%), Positives = 33/65 (50%), Gaps = 8/65 (12%)

Query: 189 CAQVVPVPEPPLHPVVPDLP-----SSVVFPDREAAR-AVLEECTSFIPEARAVLDLVDQ 242
           C Q+       L P++PDLP     S +  P + A R   +++C S +P     LDL+++
Sbjct: 240 CIQLAACEATELLPMIPDLPADLFTSCLTTPIKIALRWFCMQKCVSLVP--GVTLDLIEK 297

Query: 243 CPKQI 247
            P ++
Sbjct: 298 IPGRL 302


>gi|251823858 raptor isoform 2 [Homo sapiens]
          Length = 1177

 Score = 30.0 bits (66), Expect = 4.4
 Identities = 19/65 (29%), Positives = 33/65 (50%), Gaps = 8/65 (12%)

Query: 189 CAQVVPVPEPPLHPVVPDLP-----SSVVFPDREAAR-AVLEECTSFIPEARAVLDLVDQ 242
           C Q+       L P++PDLP     S +  P + A R   +++C S +P     LDL+++
Sbjct: 240 CIQLAACEATELLPMIPDLPADLFTSCLTTPIKIALRWFCMQKCVSLVP--GVTLDLIEK 297

Query: 243 CPKQI 247
            P ++
Sbjct: 298 IPGRL 302


>gi|48527952 golgi associated, gamma adaptin ear containing, ARF
           binding protein 1 isoform 2 [Homo sapiens]
          Length = 552

 Score = 30.0 bits (66), Expect = 4.4
 Identities = 18/69 (26%), Positives = 35/69 (50%), Gaps = 5/69 (7%)

Query: 195 VPEPPLHPVVPDLPSSVVFPDREAARAVLEECTSFIPE-----ARAVLDLVDQCPKQIQK 249
           +P+    P+ P  P +V+F D E ++ +     S  PE      + + ++V +  K+++K
Sbjct: 151 LPDDTTFPLPPPRPKNVIFEDEEKSKMLARLLKSSHPEDLRAANKLIKEMVQEDQKRMEK 210

Query: 250 GKFQVVAIE 258
              +V AIE
Sbjct: 211 ISKRVNAIE 219


>gi|197209826 chromosome 2 open reading frame 21 isoform 1 [Homo
            sapiens]
          Length = 3258

 Score = 29.6 bits (65), Expect = 5.8
 Identities = 31/121 (25%), Positives = 50/121 (41%), Gaps = 18/121 (14%)

Query: 298  EPTIIRRAFYSLGNYIVASEIAKESAKSPVIVDRYWHSTATYAIATEVSGGLQHLPPAHH 357
            EP +I      + +++  +EIA    K            A Y   T  S GL+       
Sbjct: 2520 EPRVIALELLDVKSHMRLAEIAHSLLK-----------LAPYDTQTMESRGLRRYIMEML 2568

Query: 358  PVYQWPEDLLKPDLILLLTVSPEERLQRLQGR--GMEKTREEAELEANSVFRQKVEMSYQ 415
            P+  W  + ++P LIL+L     +RL R+  +   M   R + E E  S   + V ++ Q
Sbjct: 2569 PITDWTAEAVRPALILIL-----KRLDRMFNKIHKMPTLRRQVEWEPASNLIEGVCLTLQ 2623

Query: 416  R 416
            R
Sbjct: 2624 R 2624


>gi|169167792 PREDICTED: similar to hCG1745223 [Homo sapiens]
          Length = 320

 Score = 29.3 bits (64), Expect = 7.6
 Identities = 30/102 (29%), Positives = 40/102 (39%), Gaps = 10/102 (9%)

Query: 128 QQGFLLRDPLDDPDTRQALLELLGACQEAPRPHLGEFEADPRGQLWQR--LWEVQDGRRL 185
           Q+ +L   P   P TRQ   E+ GA   APRP        P         L E++ G++ 
Sbjct: 141 QRRWLRTTPHPPPPTRQGSREMAGAFLVAPRPPYSRSPGGPESAPTPASVLPELRRGKQD 200

Query: 186 QVGCAQVVP------VPEPPLHPVVPDLPSSVVFPDREAARA 221
            +     +P      V  P L P  P  P +V  P    ARA
Sbjct: 201 LLSADSGLPAVDQGEVAGPRLQPAQPLRPGAV--PSASRARA 240


>gi|88987622 PREDICTED: similar to hCG1745223 [Homo sapiens]
          Length = 320

 Score = 29.3 bits (64), Expect = 7.6
 Identities = 30/102 (29%), Positives = 40/102 (39%), Gaps = 10/102 (9%)

Query: 128 QQGFLLRDPLDDPDTRQALLELLGACQEAPRPHLGEFEADPRGQLWQR--LWEVQDGRRL 185
           Q+ +L   P   P TRQ   E+ GA   APRP        P         L E++ G++ 
Sbjct: 141 QRRWLRTTPHPPPPTRQGSREMAGAFLVAPRPPYSRSPGGPESAPTPASVLPELRRGKQD 200

Query: 186 QVGCAQVVP------VPEPPLHPVVPDLPSSVVFPDREAARA 221
            +     +P      V  P L P  P  P +V  P    ARA
Sbjct: 201 LLSADSGLPAVDQGEVAGPRLQPAQPLRPGAV--PSASRARA 240


>gi|51464815 PREDICTED: similar to hCG1745223 [Homo sapiens]
          Length = 319

 Score = 29.3 bits (64), Expect = 7.6
 Identities = 30/102 (29%), Positives = 40/102 (39%), Gaps = 10/102 (9%)

Query: 128 QQGFLLRDPLDDPDTRQALLELLGACQEAPRPHLGEFEADPRGQLWQR--LWEVQDGRRL 185
           Q+ +L   P   P TRQ   E+ GA   APRP        P         L E++ G++ 
Sbjct: 140 QRRWLRTTPHPPPPTRQGSREMAGAFLVAPRPPYSRSPGGPESAPTPASVLPELRRGKQD 199

Query: 186 QVGCAQVVP------VPEPPLHPVVPDLPSSVVFPDREAARA 221
            +     +P      V  P L P  P  P +V  P    ARA
Sbjct: 200 LLSADSGLPAVDQGEVAGPRLQPAQPLRPGAV--PSASRARA 239


>gi|121674801 hepatocyte cell adhesion molecule [Homo sapiens]
          Length = 416

 Score = 29.3 bits (64), Expect = 7.6
 Identities = 17/41 (41%), Positives = 21/41 (51%), Gaps = 3/41 (7%)

Query: 57  APDPRLAALLGPPERSYSLCVPVTPDAGCGARVRAARLHQR 97
           AP+PR A   GPP  S S   P  P    G  +R+AR + R
Sbjct: 326 APEPRSATEPGPPGYSVS---PAVPGRSPGLPIRSARRYPR 363


>gi|58331144 proline rich region 18 [Homo sapiens]
          Length = 295

 Score = 29.3 bits (64), Expect = 7.6
 Identities = 25/77 (32%), Positives = 38/77 (49%), Gaps = 8/77 (10%)

Query: 67  GP-PERSYSLCVPVTPDAGCGARVRAARLHQRLLHQLRRG-PFQRCQLLRLLCYCPGGQA 124
           GP P+ +   C+ +TP+A    + R   L ++LL + RR  P    +  RLL  C   +A
Sbjct: 126 GPCPDSAARFCLNLTPEAVLVIQKR--HLEKQLLARPRRPFPSPSAEPRRLLAPCLPARA 183

Query: 125 GGAQQGFLLRDPLDDPD 141
            G ++G     P  DPD
Sbjct: 184 AGPRRG----GPASDPD 196


>gi|218083800 Rho GTPase-activating protein isoform 1 [Homo sapiens]
          Length = 2087

 Score = 29.3 bits (64), Expect = 7.6
 Identities = 17/40 (42%), Positives = 19/40 (47%)

Query: 192  VVPVPEPPLHPVVPDLPSSVVFPDREAARAVLEECTSFIP 231
            VVPVPE P  P   D P+S    D  AA A     T+  P
Sbjct: 1341 VVPVPERPPEPRAMDDPASAFISDSGAAAAQCPMATAVQP 1380


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.321    0.138    0.425 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,847,712
Number of Sequences: 37866
Number of extensions: 1026866
Number of successful extensions: 3077
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 29
Number of HSP's that attempted gapping in prelim test: 3051
Number of HSP's gapped (non-prelim): 48
length of query: 449
length of database: 18,247,518
effective HSP length: 106
effective length of query: 343
effective length of database: 14,233,722
effective search space: 4882166646
effective search space used: 4882166646
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.