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Search of human proteins with 239748278
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239748278 PREDICTED: hypothetical protein [Homo sapiens]
(416 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239753698 PREDICTED: hypothetical protein [Homo sapiens] 850 0.0
gi|239748278 PREDICTED: hypothetical protein [Homo sapiens] 850 0.0
gi|158854042 hypothetical protein LOC222183 [Homo sapiens] 59 8e-09
gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens] 54 3e-07
gi|163965366 nascent polypeptide-associated complex alpha subuni... 52 1e-06
gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens] 51 2e-06
gi|153251865 hypothetical protein LOC84226 [Homo sapiens] 49 1e-05
gi|239748777 PREDICTED: hypothetical protein [Homo sapiens] 47 4e-05
gi|21040326 SON DNA-binding protein isoform F [Homo sapiens] 47 4e-05
gi|21040314 SON DNA-binding protein isoform B [Homo sapiens] 47 4e-05
gi|187829730 BCL2 binding component 3 isoform 1 [Homo sapiens] 46 5e-05
gi|221139764 PHD and ring finger domains 1 [Homo sapiens] 46 7e-05
gi|41152076 steroid-sensitive protein 1 [Homo sapiens] 45 9e-05
gi|41152074 steroid-sensitive protein 1 [Homo sapiens] 45 9e-05
gi|169167740 PREDICTED: hypothetical protein [Homo sapiens] 45 1e-04
gi|89276756 serine/threonine-protein kinase PRP4K [Homo sapiens] 45 1e-04
gi|182507165 thymus expressed gene 3-like [Homo sapiens] 45 1e-04
gi|113416994 PREDICTED: hypothetical protein [Homo sapiens] 45 2e-04
gi|113416470 PREDICTED: hypothetical protein [Homo sapiens] 45 2e-04
gi|209862765 RUN and SH3 domain containing 2 [Homo sapiens] 45 2e-04
gi|55741719 RUN and SH3 domain containing 2 [Homo sapiens] 45 2e-04
gi|169214061 PREDICTED: hypothetical protein [Homo sapiens] 44 2e-04
gi|169214437 PREDICTED: hypothetical protein [Homo sapiens] 44 2e-04
gi|169213353 PREDICTED: hypothetical protein [Homo sapiens] 44 2e-04
gi|239742598 PREDICTED: hypothetical protein [Homo sapiens] 44 2e-04
gi|188536004 zinc finger protein 469 [Homo sapiens] 44 3e-04
gi|78042577 MAP7 domain containing 1 [Homo sapiens] 44 3e-04
gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 44 4e-04
gi|17136078 VGF nerve growth factor inducible precursor [Homo sa... 44 4e-04
gi|224548936 hypothetical protein LOC100170229 [Homo sapiens] 43 5e-04
>gi|239753698 PREDICTED: hypothetical protein [Homo sapiens]
Length = 416
Score = 850 bits (2195), Expect = 0.0
Identities = 416/416 (100%), Positives = 416/416 (100%)
Query: 1 MCKKSIKFRKKNKDEKNTSSGLQRQATHRDTPHLVTLGFCGTPGQKHFPKKPPLQSLPAR 60
MCKKSIKFRKKNKDEKNTSSGLQRQATHRDTPHLVTLGFCGTPGQKHFPKKPPLQSLPAR
Sbjct: 1 MCKKSIKFRKKNKDEKNTSSGLQRQATHRDTPHLVTLGFCGTPGQKHFPKKPPLQSLPAR 60
Query: 61 RRATPRRRARVRVTPPVGRGGLLSSWSRAAPTPRSAAEAPPGSAIPAHLPRSVQRVLGAR 120
RRATPRRRARVRVTPPVGRGGLLSSWSRAAPTPRSAAEAPPGSAIPAHLPRSVQRVLGAR
Sbjct: 61 RRATPRRRARVRVTPPVGRGGLLSSWSRAAPTPRSAAEAPPGSAIPAHLPRSVQRVLGAR 120
Query: 121 RTEPRSAGERRRALPAAAGRKTKTWQSQNQSPRSARAPHTAGAGPGPGPEPRGRRSHSPL 180
RTEPRSAGERRRALPAAAGRKTKTWQSQNQSPRSARAPHTAGAGPGPGPEPRGRRSHSPL
Sbjct: 121 RTEPRSAGERRRALPAAAGRKTKTWQSQNQSPRSARAPHTAGAGPGPGPEPRGRRSHSPL 180
Query: 181 GFFSPSVPSRSPLPEREPERTDDRSRVESSARAGDQRRGREPTSRDHRAATRRAAHGPFR 240
GFFSPSVPSRSPLPEREPERTDDRSRVESSARAGDQRRGREPTSRDHRAATRRAAHGPFR
Sbjct: 181 GFFSPSVPSRSPLPEREPERTDDRSRVESSARAGDQRRGREPTSRDHRAATRRAAHGPFR 240
Query: 241 RRERRKPRPRSESSQLACHLDLCFKWLPVASSRRPVAEAEPGRPEFGSASTRGCEEGRRV 300
RRERRKPRPRSESSQLACHLDLCFKWLPVASSRRPVAEAEPGRPEFGSASTRGCEEGRRV
Sbjct: 241 RRERRKPRPRSESSQLACHLDLCFKWLPVASSRRPVAEAEPGRPEFGSASTRGCEEGRRV 300
Query: 301 PRGTGSTCLRTDGGSLCSEKTQTPEGGCETERPVSVRLALFICLLPRRLQPLIPAHPVRK 360
PRGTGSTCLRTDGGSLCSEKTQTPEGGCETERPVSVRLALFICLLPRRLQPLIPAHPVRK
Sbjct: 301 PRGTGSTCLRTDGGSLCSEKTQTPEGGCETERPVSVRLALFICLLPRRLQPLIPAHPVRK 360
Query: 361 QTAASPTATRRGRLPRAGQAGQAAHLRRPTISWALYATLQKGSCEVLAIEAHLLVF 416
QTAASPTATRRGRLPRAGQAGQAAHLRRPTISWALYATLQKGSCEVLAIEAHLLVF
Sbjct: 361 QTAASPTATRRGRLPRAGQAGQAAHLRRPTISWALYATLQKGSCEVLAIEAHLLVF 416
>gi|239748278 PREDICTED: hypothetical protein [Homo sapiens]
Length = 416
Score = 850 bits (2195), Expect = 0.0
Identities = 416/416 (100%), Positives = 416/416 (100%)
Query: 1 MCKKSIKFRKKNKDEKNTSSGLQRQATHRDTPHLVTLGFCGTPGQKHFPKKPPLQSLPAR 60
MCKKSIKFRKKNKDEKNTSSGLQRQATHRDTPHLVTLGFCGTPGQKHFPKKPPLQSLPAR
Sbjct: 1 MCKKSIKFRKKNKDEKNTSSGLQRQATHRDTPHLVTLGFCGTPGQKHFPKKPPLQSLPAR 60
Query: 61 RRATPRRRARVRVTPPVGRGGLLSSWSRAAPTPRSAAEAPPGSAIPAHLPRSVQRVLGAR 120
RRATPRRRARVRVTPPVGRGGLLSSWSRAAPTPRSAAEAPPGSAIPAHLPRSVQRVLGAR
Sbjct: 61 RRATPRRRARVRVTPPVGRGGLLSSWSRAAPTPRSAAEAPPGSAIPAHLPRSVQRVLGAR 120
Query: 121 RTEPRSAGERRRALPAAAGRKTKTWQSQNQSPRSARAPHTAGAGPGPGPEPRGRRSHSPL 180
RTEPRSAGERRRALPAAAGRKTKTWQSQNQSPRSARAPHTAGAGPGPGPEPRGRRSHSPL
Sbjct: 121 RTEPRSAGERRRALPAAAGRKTKTWQSQNQSPRSARAPHTAGAGPGPGPEPRGRRSHSPL 180
Query: 181 GFFSPSVPSRSPLPEREPERTDDRSRVESSARAGDQRRGREPTSRDHRAATRRAAHGPFR 240
GFFSPSVPSRSPLPEREPERTDDRSRVESSARAGDQRRGREPTSRDHRAATRRAAHGPFR
Sbjct: 181 GFFSPSVPSRSPLPEREPERTDDRSRVESSARAGDQRRGREPTSRDHRAATRRAAHGPFR 240
Query: 241 RRERRKPRPRSESSQLACHLDLCFKWLPVASSRRPVAEAEPGRPEFGSASTRGCEEGRRV 300
RRERRKPRPRSESSQLACHLDLCFKWLPVASSRRPVAEAEPGRPEFGSASTRGCEEGRRV
Sbjct: 241 RRERRKPRPRSESSQLACHLDLCFKWLPVASSRRPVAEAEPGRPEFGSASTRGCEEGRRV 300
Query: 301 PRGTGSTCLRTDGGSLCSEKTQTPEGGCETERPVSVRLALFICLLPRRLQPLIPAHPVRK 360
PRGTGSTCLRTDGGSLCSEKTQTPEGGCETERPVSVRLALFICLLPRRLQPLIPAHPVRK
Sbjct: 301 PRGTGSTCLRTDGGSLCSEKTQTPEGGCETERPVSVRLALFICLLPRRLQPLIPAHPVRK 360
Query: 361 QTAASPTATRRGRLPRAGQAGQAAHLRRPTISWALYATLQKGSCEVLAIEAHLLVF 416
QTAASPTATRRGRLPRAGQAGQAAHLRRPTISWALYATLQKGSCEVLAIEAHLLVF
Sbjct: 361 QTAASPTATRRGRLPRAGQAGQAAHLRRPTISWALYATLQKGSCEVLAIEAHLLVF 416
>gi|158854042 hypothetical protein LOC222183 [Homo sapiens]
Length = 653
Score = 58.9 bits (141), Expect = 8e-09
Identities = 83/312 (26%), Positives = 117/312 (37%), Gaps = 52/312 (16%)
Query: 41 GTPGQKHFPKKPPLQSLPARRRATPRRRARVRVTPPVGRGGLLSSWSRAAPTPRSAAEAP 100
G PG H P P P R + A TPP RG + +P+PRSA
Sbjct: 326 GRPGSAHSPPDKPSSPSPRVRD----KAAAAAPTPPA-RG-------KESPSPRSA---- 369
Query: 101 PGSAIPAHLPRSVQRVLGARRTEPRSAGERRRALPAAAGRKTKTWQSQNQSPRS------ 154
P+ R + GA R R RR A+A R+ + + PR
Sbjct: 370 -----PSSQGRGGRAAGGAGRRRRRRRRRRRSRSSASAPRRRGRRRPRPAPPRGSSRSLS 424
Query: 155 -ARAPHTAGAG---PGPGPEPRGRRSHSPLGFFSPSVPSR------SPLPERE-----PE 199
AR+ +G+G PGPGPEP R H G + P R SP P PE
Sbjct: 425 RARSSSDSGSGRGAPGPGPEPGSERGHGGHGKRAKERPPRARPASTSPSPGAHGRRGGPE 484
Query: 200 -RTDDRS-----RVESSARAGDQRRGREPTSRDHRAATRRAAHGPFRRRERRKPRPRSES 253
++ RS R SS+R+ + R R R H + + P R + + R R
Sbjct: 485 GKSSSRSPGPHPRSWSSSRSPSKSRSRSAEKRPHSPSRSPSPKKPLSRDKDGEGRARHSE 544
Query: 254 SQLACHLDLCFKWLPVASSRRPVAE-AEPGRPEFGSASTRGCEEGRRVPRGTGSTCLRTD 312
++ + P+ RR EP R SA R R P + S+CL +D
Sbjct: 545 AEATRARRRSRSYSPIRKRRRDSPSFMEPRR--ITSARKRPIPYYRPSP-SSSSSCLSSD 601
Query: 313 GGSLCSEKTQTP 324
+ ++ +P
Sbjct: 602 YSTRSHSRSPSP 613
>gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]
Length = 2752
Score = 53.5 bits (127), Expect = 3e-07
Identities = 84/336 (25%), Positives = 117/336 (34%), Gaps = 72/336 (21%)
Query: 49 PKKPPLQSLPARRRATPRRRARV------RVTPPVGRGGLLSSWSRAAPTPRSAAEAPPG 102
P PP ++ P R R+ P+ ++ +PP + +S + ++P A AP
Sbjct: 390 PVNPPSEASPTRDRSPPKSPEKLPQSSSSESSPPSPQPTKVSRHASSSPESPKPAPAPGS 449
Query: 103 SAIPAHLPRSVQRVLGARR-------TEPRSAGERRRALPAAAGRK-----TKTWQSQNQ 150
+ P S R G + T R G R A GR TK S+++
Sbjct: 450 HREISSSPTSKNRSHGRAKRDKSHSHTPSRRMGRSRSPATAKRGRSRSRTPTKRGHSRSR 509
Query: 151 SPRSARAPHTAGAGPGPGPEPRGR---------------------------RSHSPLGFF 183
SP+ R+ G P+ RGR RSHS
Sbjct: 510 SPQWRRSRSAQRWGRSRSPQRRGRSRSPQRPGWSRSRNTQRRGRSRSARRGRSHSRSPAT 569
Query: 184 SPSVPSRSPLPE-----REPERTDDRSRVESSARAGDQRRGREPTSRDHRAATRRA-AHG 237
SR+P R P R RSR + R+ + R SR A RR+
Sbjct: 570 RGRSRSRTPARRGRSRSRTPARRRSRSRTPTRRRSRSRTPARRGRSRSRTPARRRSRTRS 629
Query: 238 PFRRRER-RKPRPRSESSQLACHLDLCFKWLPVASSRRPVAEAEPGRPEFGSASTRGCEE 296
P RRR R R P RS S+ SR P A GR + + RG
Sbjct: 630 PVRRRSRSRSPARRSGRSR----------------SRTP---ARRGRSRSRTPARRGRSR 670
Query: 297 GRRVPRGTGSTCLRTDGGSLCSEKTQTPEGGCETER 332
R R +G + RT S +++TP G R
Sbjct: 671 SRTPARRSGRSRSRTPARRGRS-RSRTPRRGRSRSR 705
Score = 53.5 bits (127), Expect = 3e-07
Identities = 58/236 (24%), Positives = 88/236 (37%), Gaps = 32/236 (13%)
Query: 49 PKKPPLQSLPARRRATPRRRARVRVTPPVGRGGLLSS------------WSRAAPTPRSA 96
PK P ++LP R R+ + R P G SS SR++P P++
Sbjct: 1624 PKAPAPRALPRRSRSGSSSKGRG--PSPEGSSSTESSPEHPPKSRTARRGSRSSPEPKTK 1681
Query: 97 AEAPPGSAIPAHLPRSVQRVLGARRTEPRSAGE--------RRRALPAAAGRKTKTWQSQ 148
+ PP P ++ +RR+ S+ R R P+ + +
Sbjct: 1682 SRTPPRRRSSRSSPELTRKARLSRRSRSASSSPETRSRTPPRHRRSPSVSSPEPAEKSRS 1741
Query: 149 NQSPRSARAPHT---AGAGPGPGPEPRG-RRSHSPLGFFSPSVPSR------SPLPEREP 198
++ RSA +P T + G P P+PRG +RS S R S R
Sbjct: 1742 SRRRRSASSPRTKTTSRRGRSPSPKPRGLQRSRSRSRREKTRTTRRRDRSGSSQSTSRRR 1801
Query: 199 ERTDDRSRVESSARAGDQRRGREPTSRDHRAATRRAAHGPFRRRERRKPRPRSESS 254
+R+ RSRV R G R P ++ + R G R + R RS +S
Sbjct: 1802 QRSRSRSRVTRRRRGGSGYHSRSPARQESSRTSSRRRRGRSRTPPTSRKRSRSRTS 1857
Score = 51.6 bits (122), Expect = 1e-06
Identities = 78/327 (23%), Positives = 112/327 (34%), Gaps = 51/327 (15%)
Query: 9 RKKNKDEKNTSSGLQRQATHRDTPHLVTLGFCGTPGQKHFPKKPPLQSLPARRRA---TP 65
R +N + S +R +H +P TP ++ + PARRR+ TP
Sbjct: 544 RSRNTQRRGRSRSARRGRSHSRSPATRGRSRSRTPARRGRSRS----RTPARRRSRSRTP 599
Query: 66 RRRARVRVTPPVGRGGLLSSWSRAAPTPRSAAEAPPGSAIPAHLPRSVQRVLGARRTEPR 125
RR R R P RG S SR RS +P R R+ R
Sbjct: 600 TRR-RSRSRTPARRG---RSRSRTPARRRSRTRSPV-------------RRRSRSRSPAR 642
Query: 126 SAGERRRALPAAAGRKTKTWQSQNQSPRSARAPHTAGAGPGPGPEPRGRRSHSPLGFFSP 185
+G R PA GR ++ RS +G P RGR
Sbjct: 643 RSGRSRSRTPARRGRSRSRTPARRGRSRSRTPARRSGRSRSRTPARRGR----------- 691
Query: 186 SVPSRSPLPEREPERTDDRSRVESSARAGDQRRGREPTSRDHRAATRRAAHGPFRRRERR 245
SRS P R R+ R S QRRGR +S + + +R + +RR R
Sbjct: 692 ---SRSRTPRRGRSRSRSLVRRGRSHSRTPQRRGRSGSSSERKNKSRTS-----QRRSRS 743
Query: 246 KPRPRSESSQLACHLDLCF-----KWLPVASSRRPVAEAEPGRPEFGSASTRGCEEGRRV 300
P + S+++ K S RR ++ + P + R G
Sbjct: 744 NSSPEMKKSRISSRRSRSLSSPRSKAKSRLSLRRSLSGSSPCPKQKSQTPPRRSRSGSSQ 803
Query: 301 PRGTGSTCLRTDGGSLC---SEKTQTP 324
P+ T R S +K++TP
Sbjct: 804 PKAKSRTPPRRSRSSSSPPPKQKSKTP 830
Score = 45.4 bits (106), Expect = 9e-05
Identities = 83/367 (22%), Positives = 127/367 (34%), Gaps = 76/367 (20%)
Query: 85 SWSRAAPTPRSAAEAPPGSAIPAHLPRSVQRVLGARRTEPRSAGERRRALPAAAGRKTKT 144
S S +P A +I + + +V R R+ S+ E + LP R++++
Sbjct: 1382 SSSELSPDAVEKAGMSSNQSISSPVLDAVPRTPSRERSSSASSPEMKDGLPRTPSRRSRS 1441
Query: 145 WQSQNQSPRSARAPHTAGAGPGPG------------------PEPRG------RRSHSPL 180
S S + +G PG PEP+ RS SP
Sbjct: 1442 GSSPGLRDGSGTPSRHSLSGSSPGMKDIPRTPSRGRSECDSSPEPKALPQTPRPRSRSP- 1500
Query: 181 GFFSPSVPSRSPLPEREPERTD--------------DRSRVESSAR------AGDQRRGR 220
SP + ++ P+RE ++ RSR SS A Q R
Sbjct: 1501 --SSPELNNKCLTPQRERSGSESSVDQKTVARTPLGQRSRSGSSQELDVKPSASPQERSE 1558
Query: 221 EPTSRDHRAATRRAAHGPFRRRERRKPRPRSES-SQLACHLDLCFKWLPVASSRRPVAEA 279
+S D +A TR P R+R R P +S S+L+ V R A
Sbjct: 1559 SDSSPDSKAKTRT----PLRQRSRSGSSPEVDSKSRLSPRRSRSGSSPEVKDKPRAAPRA 1614
Query: 280 EPGRPEFGSASTRGCEEGRRVPRGTGSTCLRTDGGSLCSEKTQTPEGGCET----ERPVS 335
+ G S+ R +PR R+ GS + +PEG T E P
Sbjct: 1615 QSGS---DSSPEPKAPAPRALPR-------RSRSGSSSKGRGPSPEGSSSTESSPEHPPK 1664
Query: 336 VRLALFICLLPRRLQPLIPAHPVRKQTAASPTATRRGRLPRAGQAGQAA----------H 385
R A + P R+ + +SP TR+ RL R ++ ++ H
Sbjct: 1665 SRTARRGSRSSPEPKTKSRTPPRRRSSRSSPELTRKARLSRRSRSASSSPETRSRTPPRH 1724
Query: 386 LRRPTIS 392
R P++S
Sbjct: 1725 RRSPSVS 1731
Score = 44.3 bits (103), Expect = 2e-04
Identities = 99/379 (26%), Positives = 134/379 (35%), Gaps = 77/379 (20%)
Query: 59 ARRRATP--RRRARVRVTPPVGRGGLLSSWSRAAPTPR-SAAEAPPGSAIPAHLPRSVQR 115
+R RA+P RRR+R R TPPV R S SR T R S + PP + RS
Sbjct: 1911 SRSRASPVSRRRSRSR-TPPVTRR---RSRSRTPTTRRRSRSRTPP---VTRRRSRSRTP 1963
Query: 116 VLGARRTEPRSAGERRRALPAAAGRKTKTWQSQNQSP------RSARAPHTAGAGPGPGP 169
+ RR+ R++ RR + T+ SP RS +P T P
Sbjct: 1964 PVTRRRSRSRTSPITRRRSRSRTSPVTRRRSRSRTSPVTRRRSRSRTSPVTRRRSRSRTP 2023
Query: 170 EPRGRRSHSPLGFFSPSVPSRSPLPEREPERTDDRSRVESSARAGDQR--RGREPTSRDH 227
RRS S R+PL R+ R+ + +R+ R RG+ +R
Sbjct: 2024 PAIRRRSRS-----------RTPLLPRKRSRSRSPLAIRRRSRSRTPRTARGKRSLTRSP 2072
Query: 228 RAATRRAAHGPF--RRRERRKPRPRSESSQLACHLDLCFKWLPVA--SSRRPVAEAEPGR 283
A RR+A G R R P R+ S + PVA SSR R
Sbjct: 2073 PAIRRRSASGSSSDRSRSATPPATRNHSGS---------RTPPVALNSSRMSCF----SR 2119
Query: 284 PEFGSASTRGCEE-GRRVPRGTGST---CLRTDGGSLCS---------EKTQTPEGGCET 330
P C G P G+ T L+ GGS+ ++T PE ++
Sbjct: 2120 PSMSPTPLDRCRSPGMLEPLGSSRTPMSVLQQAGGSMMDGPGPRIPDHQRTSVPENHAQS 2179
Query: 331 ERPVSVRLALFICLLPRRLQP-------------LIPAHPVRKQTAASPTATRRGRLPRA 377
+ LAL L P +PA +P A R+P A
Sbjct: 2180 R----IALALTAISLGTARPPPSMSAAGLAARMSQVPAPVPLMSLRTAPAANLASRIPAA 2235
Query: 378 GQAG-QAAHLRRPTISWAL 395
A A R P I A+
Sbjct: 2236 SAAAMNLASARTPAIPTAV 2254
Score = 41.6 bits (96), Expect = 0.001
Identities = 48/198 (24%), Positives = 73/198 (36%), Gaps = 34/198 (17%)
Query: 84 SSWSRAAPTPRSAAEAPPGSA---IPAHLPRSVQRVLGARRTEPRSAGERRRALPAAAGR 140
SS S ++ + S+ P A +P+ P + V R EP A +RR+ +++
Sbjct: 2555 SSGSSSSDSEGSSLPVQPEVALKRVPSPTPAPKEAVREGRPPEPTPAKRKRRSSSSSSSS 2614
Query: 141 KTKTWQSQNQSPRSARAPHTAG---------------AGPGPG----------PEPRGRR 175
+ + S + S S+ + ++ A PGP P P RR
Sbjct: 2615 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSPSPAKPGPQALPKPASPKKPPPGERR 2674
Query: 176 SHSPLGFFSPSVPSRS----PLPEREPERTDDRSRVESSARAGDQRRGREPTSR--DHRA 229
S SP SRS P+ R P +SS+ RRG+ SR H+
Sbjct: 2675 SRSPRKPIDSLRDSRSLSYSPVERRRPSPQPSPRDQQSSSSERGSRRGQRGDSRSPSHKR 2734
Query: 230 ATRRAAHGPFRRRERRKP 247
+ P R R R P
Sbjct: 2735 RRETPSPRPMRHRSSRSP 2752
Score = 41.2 bits (95), Expect = 0.002
Identities = 96/389 (24%), Positives = 135/389 (34%), Gaps = 62/389 (15%)
Query: 15 EKNTSSGLQRQATHRDTPHLVTLGFCGTPGQKHFPKKPPLQSLPARRRATPRRRARVRVT 74
EK+ SS +R A+ +P T G+ PK LQ R + RR + R T
Sbjct: 1737 EKSRSSRRRRSAS---SPRTKTTS---RRGRSPSPKPRGLQ-----RSRSRSRREKTRTT 1785
Query: 75 PPVGRGGLLSSWSRAAPTPRSAAEAPP----GSAIPAHLPRSVQRVLGARRTEPRSAGER 130
R G S SR RS + GS + P AR+ R++ R
Sbjct: 1786 RRRDRSGSSQSTSRRRQRSRSRSRVTRRRRGGSGYHSRSP--------ARQESSRTSSRR 1837
Query: 131 RRALPAAAGRKTKTWQSQNQSPRSARAPHTAGAGPGPGPEPRGRRSHSPLGFFSPSVPSR 190
RR R T + +++S R++ AP R RS +PL S
Sbjct: 1838 RRG----RSRTPPTSRKRSRS-RTSPAPWKRSRSRASPATHRRSRSRTPLISRRRSRSRT 1892
Query: 191 SPLPEREPERTDDRSRVESSARAG--DQRRGREPTSRDHRAATRRAAHGPFRRRERRKP- 247
SP+ R +R S +RA +RR R T R +R RR R P
Sbjct: 1893 SPVSRRRSRSRTSVTRRRSRSRASPVSRRRSRSRTPPVTRRRSRSRTPTTRRRSRSRTPP 1952
Query: 248 --RPRSESSQLACHLDLCFKWLPVASSRRPVAEAEPGRPEFGSASTRGCEEGRRVPRGTG 305
R RS S P + RR + P + +R RR R
Sbjct: 1953 VTRRRSRSR------------TPPVTRRRSRSRTSPITRR--RSRSRTSPVTRRRSRSRT 1998
Query: 306 STCLRTDGGSLCSEKTQTPEGGCETERPVSVRLALFICLLPRRLQPLIPAHPVRKQTAAS 365
S R S S T+ + P ++R RR + P P ++ + S
Sbjct: 1999 SPVTRRRSRSRTSPVTRRRS---RSRTPPAIR---------RRSRSRTPLLPRKRSRSRS 2046
Query: 366 PTATR---RGRLPRAGQAGQAAHLRRPTI 391
P A R R R PR + ++ P I
Sbjct: 2047 PLAIRRRSRSRTPRTARGKRSLTRSPPAI 2075
Score = 37.4 bits (85), Expect = 0.025
Identities = 65/294 (22%), Positives = 93/294 (31%), Gaps = 41/294 (13%)
Query: 43 PGQKHFPKKPPLQSLPARRRATPRRRARVRVTPPVGRGGLLSSWSRAAPT---------- 92
P Q P P + + R + T PV LSS + A T
Sbjct: 2435 PSQSLLPPAQDQPRSPVPSAFSDQSRCLIAQTTPVAGSQSLSSGAVATTTSSAGDHNGML 2494
Query: 93 -------PRSAAEAPPGS-------AIPAHLPRSVQRVLGARRTEPRSAGERRRALPAAA 138
P S PP S A+ A P +R + + S+ + +++
Sbjct: 2495 SVPAPGVPHSDVGEPPASTGAQQPSALAALQPAKERRSSSSSSSSSSSSSSSSSSSSSSS 2554
Query: 139 GRKTKTWQSQNQS------------PRSARAPHTA-GAGPGPGPEPRGRRSHSPLGFFSP 185
+ + S+ S P AP A G P P P R+ S S
Sbjct: 2555 SSGSSSSDSEGSSLPVQPEVALKRVPSPTPAPKEAVREGRPPEPTPAKRKRRSSSSSSSS 2614
Query: 186 SVPSRSPLPEREPERTDDRSRVESSARAGDQRRGREPTSRDHRAATRRAAHGPFRRRERR 245
S S S + S SS+ + P +A + A+ ERR
Sbjct: 2615 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSPSPAKPGPQALPKPASPKKPPPGERR 2674
Query: 246 KPRPRSESSQLACHLDLCFKWLPVASSRRPVAEAEPGRPEFGSASTRGCEEGRR 299
PR L L + PV RRP + P R + S+S RG G+R
Sbjct: 2675 SRSPRKPIDSLRDSRSLSYS--PV-ERRRPSPQPSP-RDQQSSSSERGSRRGQR 2724
Score = 35.0 bits (79), Expect = 0.13
Identities = 59/278 (21%), Positives = 98/278 (35%), Gaps = 55/278 (19%)
Query: 7 KFRKKNKDE-KNTSSGLQRQATHRDTPHLVTLGFCGTPGQKHFPKKPPLQSLPARRRATP 65
K +KK KD + + S R+ + + + +KH P ++R++
Sbjct: 188 KKKKKKKDRGRRSESSSPRRERKKSSKKKKHRSESESKKRKHRSPTPK-----SKRKSKD 242
Query: 66 RRRARVRVTPPVGRG---------GLLSSWSRAAPTPRSAAEAPPGSAIPAHLPRSVQRV 116
++R R R T P + SS + RSAA +A+ P
Sbjct: 243 KKRKRSRSTTPAPKSRRAHRSTSADSASSSDTSRSRSRSAAAKTHTTALAGRSPSPASGR 302
Query: 117 LG---ARRTEPRSAGERRRALPAAAGRKTKTW-------QSQNQSPRSARAPHTAGAGPG 166
G A +EP + +R + P A ++ + + + + R + +P + GP
Sbjct: 303 RGEGDAPFSEPGTTSTQRPSSPETATKQPSSPYEDKDKDKKEKSATRPSPSPERSSTGPE 362
Query: 167 P-------------GPEPRGRR--SHSPLGFFSPSVPSRSPLPEREPERTDDRSRVESSA 211
P P+P S P+ S + P+R P + PE+ S ESS
Sbjct: 363 PPAPTPLLAERHGGSPQPLATTPLSQEPVNPPSEASPTRDRSPPKSPEKLPQSSSSESS- 421
Query: 212 RAGDQRRGREPTSRDHRAATRRAAHGPFRRRERRKPRP 249
P S +R A+ P E KP P
Sbjct: 422 ----------PPSPQPTKVSRHASSSP----ESPKPAP 445
Score = 34.3 bits (77), Expect = 0.21
Identities = 46/200 (23%), Positives = 82/200 (41%), Gaps = 32/200 (16%)
Query: 64 TPRRRARVRVTPPVGRGGLLSSWSRAAPTPRSAAEAPPGSAIPAHLPRSVQRVLGARRTE 123
T +RR+R +P + + + S SR+ +PRS A++ S++R L
Sbjct: 736 TSQRRSRSNSSPEMKKSRISSRRSRSLSSPRSKAKS----------RLSLRRSLSGSSPC 785
Query: 124 PRSAGERRRALPAAAGRKTKTWQSQNQSPRSARAPHTAGAGPGPGPEPR----GRRSHSP 179
P+ + R++++ SQ ++ +S P + + P P+ + R+SHS
Sbjct: 786 PKQKSQ-------TPPRRSRSGSSQPKA-KSRTPPRRSRSSSSPPPKQKSKTPSRQSHSS 837
Query: 180 LGFFSPSVPSRSPLPEREPERTDDRSRVESSARAGDQRRGREPTSRD----HRAATRRAA 235
SP +S P R+ T ++ +S QRR +S D R +R +
Sbjct: 838 ---SSPHPKVKSGTPPRQGSITSPQANEQS---VTPQRRSCFESSPDPELKSRTPSRHSC 891
Query: 236 HGPFRRRERRKPRPRSESSQ 255
G R + PR S+
Sbjct: 892 SGSSPPRVKSSTPPRQSPSR 911
Score = 31.6 bits (70), Expect = 1.4
Identities = 27/99 (27%), Positives = 44/99 (44%), Gaps = 21/99 (21%)
Query: 167 PGPEPRGRRSHSPLGFFSPSVPSRSPLPE--REPERTDDRSRVESSARAGDQRRG----- 219
P PEP P S SRSP P+ ++ ++ D R ESS+ ++++
Sbjct: 163 PAPEPP-----KPYSLVRESSSSRSPTPKQKKKKKKKDRGRRSESSSPRRERKKSSKKKK 217
Query: 220 ----REPTSRDHRAATRRAAHGPFRRRERRKPRPRSESS 254
E R HR+ T ++ +R+ + K R RS S+
Sbjct: 218 HRSESESKKRKHRSPTPKS-----KRKSKDKKRKRSRST 251
>gi|163965366 nascent polypeptide-associated complex alpha subunit
isoform a [Homo sapiens]
Length = 2078
Score = 51.6 bits (122), Expect = 1e-06
Identities = 82/351 (23%), Positives = 119/351 (33%), Gaps = 40/351 (11%)
Query: 42 TPGQKHFPKKPPLQSLPARRR--ATPRRRARVR---VTPPVGRGGLLSSWSRAAPTPRSA 96
TP K P PP + P+ + ATP + VTPP +GG +S + APTP +A
Sbjct: 1257 TPPPKGAPT-PPAATPPSLKGGLATPPHKGAPNPAVVTPPSPKGGPATSPPKGAPTPPAA 1315
Query: 97 AEAPPGSAIPAHLPRSVQRVLGARRTEPRSAGERRRALPAAAGRKTKTWQSQNQSPRSAR 156
P + P+ P+ P++ G T + +P +A
Sbjct: 1316 TPPSPKGSPGTPPPKGAPTPPAVTPPSPKGTPTLPATTPSSKGGPTTPSSKEGPTPPAAT 1375
Query: 157 APHTAGAGPGPGPEPRGRRSHSPLGFFSPSVPSRSPL-PEREPERTDDRSRVESSARAGD 215
H G P RG SP G P+ P+ PL P++ P R + ++
Sbjct: 1376 PSHKGGPAMTPPSPKRGPAIPSPKG--DPTSPAVIPLSPKKAPATPVTREGAATPSKGDL 1433
Query: 216 QRRGREPTSRDHRAATRRAAHGPFRRRERRKPRPRSESSQLACHLDLCFKWLPVASSRRP 275
P S AT GP P S+ P + P
Sbjct: 1434 TPPAVTPVSLKKAPATSAPKGGP--------ATPSSKGD-------------PTLPAVTP 1472
Query: 276 VAEAEPGRPEFGSASTRGCEEGRRVPRGTGSTCLRTDGGSLCSEKTQTPEGGCETERPVS 335
+ EP P+ A++ ++ P G+ L S E TP P++
Sbjct: 1473 PSPKEPPAPK-QVATSSSPKKAPATPAPMGAPTLPAVIPSSPKEVPATPS---SRRDPIA 1528
Query: 336 VRLALFICLLPRRLQP---LIP---AHPVRKQTAASPTATRRGRLPRAGQA 380
L P L P LIP P K+T A PT P + +A
Sbjct: 1529 PTATLLSKKTPATLAPKEALIPPAMTVPSPKKTPAIPTPKEAPATPSSKEA 1579
Score = 45.8 bits (107), Expect = 7e-05
Identities = 50/189 (26%), Positives = 69/189 (36%), Gaps = 25/189 (13%)
Query: 31 TPHLVTLGFC----GTPGQKHFPKKPPLQSLPARRRATPRRR------------ARVRVT 74
TP +V L F TP K P S P + RATP + T
Sbjct: 887 TPSVVNLPFPKEGPATPAPKQAPALSMTSSSPKKARATPAPKGIPASPSPKGAPTPPAAT 946
Query: 75 PPVGRGGLLSSWSRAAPTPRSAAEAPPGSAIPAHLPRSVQRVLGARRTEPRSAGERRRAL 134
PP +GG + + APTP +A P P+ A P+ A
Sbjct: 947 PPSPKGGPATPSPKWAPTPPAATPPSPKGGPATPSPKGAPTPPAATPPSPKGG----PAT 1002
Query: 135 PAAAGRKTK---TWQSQNQSPRSARAPHTAGAGP-GPGPEPRGRRSHSPLGFFSPSVPSR 190
P+ G T T S SP + P A P P P+G + +PL +P+ P+
Sbjct: 1003 PSPKGAPTPPAVTPPSPKGSPAATPFPKGASTPPAATPPSPKGSPAATPLPKGAPTTPAA 1062
Query: 191 S-PLPEREP 198
+ P P+ P
Sbjct: 1063 TLPSPKGGP 1071
Score = 37.4 bits (85), Expect = 0.025
Identities = 41/159 (25%), Positives = 62/159 (38%), Gaps = 14/159 (8%)
Query: 42 TPGQKHFPKKPPLQSLPARRR--ATPRRRARVR---VTPPVGRGGLLSSWSRAAPTPRSA 96
TP K P PP + P+ + ATP + TPP +GGL + + APT +A
Sbjct: 1073 TPSLKGAPT-PPAATPPSPKGGPATPSPKGAPMPPAATPPSPKGGLATPPHKGAPTTPAA 1131
Query: 97 AEAPPGSAIPAHLPRSVQRVLGARRTEPRS--AGERRRALPAAAGRKTKTWQSQNQSPRS 154
P + P+ A P+ A + P + + +P
Sbjct: 1132 TPPSPKGGLATPPPKGAPTTPAATPPSPKGGLATPPPKGAPTTPAATPPSPKGGLATPSP 1191
Query: 155 ARAPHTAGAGPGPGPEPR-GRRSHSPLGFFSPSVPSRSP 192
AP T A P P P+ G + SP G +P+ P+ +P
Sbjct: 1192 KGAPTTPAATP---PSPKGGLATPSPKG--APTTPAATP 1225
Score = 35.4 bits (80), Expect = 0.096
Identities = 49/224 (21%), Positives = 71/224 (31%), Gaps = 16/224 (7%)
Query: 42 TPGQKHFPKKPPLQSLPARRRATPRRR-------------ARVRVTPPVGRGGLLSSWSR 88
TP K P P + P ATP TPP +GG + +
Sbjct: 924 TPAPKGIPASPSPKGAPTPPAATPPSPKGGPATPSPKWAPTPPAATPPSPKGGPATPSPK 983
Query: 89 AAPTPRSAAEAPPGSAIPAHLPRSVQRVLGARRTEPRSAGERRRALPAAAGRKTKTWQSQ 148
APTP +A P P+ P+ + A+ T S
Sbjct: 984 GAPTPPAATPPSPKGGPATPSPKGAPTPPAVTPPSPKGSPAATPFPKGASTPPAATPPSP 1043
Query: 149 NQSPRSARAPHTAGAGPGPG-PEPRGRRSHSPLGFFSPSVPSRS-PLPEREPERTDDRSR 206
SP + P A P P P+G + +P +P+ P+ + P P+ P +
Sbjct: 1044 KGSPAATPLPKGAPTTPAATLPSPKGGPA-TPSLKGAPTPPAATPPSPKGGPATPSPKGA 1102
Query: 207 VESSARAGDQRRGREPTSRDHRAATRRAAHGPFRRRERRKPRPR 250
A +G T A T AA P + P P+
Sbjct: 1103 PMPPAATPPSPKGGLATPPHKGAPTTPAATPPSPKGGLATPPPK 1146
Score = 32.0 bits (71), Expect = 1.1
Identities = 37/139 (26%), Positives = 48/139 (34%), Gaps = 10/139 (7%)
Query: 38 GFCGTPGQKHFPKKPPLQS-LPARRRATPRRRARVRV---TPPVGRGGLLSSWSRAAPTP 93
G TP K P P P ATP + TPP +GGL + + APT
Sbjct: 1138 GGLATPPPKGAPTTPAATPPSPKGGLATPPPKGAPTTPAATPPSPKGGLATPSPKGAPTT 1197
Query: 94 RSAAEAPPGSAIPAHLPRSVQRVLGARRTEPRSAGERRRALPAAAGRKTKTWQSQNQSPR 153
+A P + P+ A P+ A P+ G T T + SP+
Sbjct: 1198 PAATPPSPKGGLATPSPKGAPTTPAATPPSPKGG----LATPSPKGAPT-TPAATPPSPK 1252
Query: 154 SARA-PHTAGAGPGPGPEP 171
A P GA P P
Sbjct: 1253 GGPATPPPKGAPTPPAATP 1271
Score = 29.3 bits (64), Expect = 6.9
Identities = 31/113 (27%), Positives = 42/113 (37%), Gaps = 10/113 (8%)
Query: 90 APTPRSAAEAPPGSAIPAHLPRSVQRVLGARRTEPRSAGE---RRRALPAAAGRKTKTWQ 146
+PTP S AP SA+ P+ V L + T S + A ++
Sbjct: 855 SPTPPSPKGAPTPSAVTPLSPKGV--TLPPKETPTPSVVNLPFPKEGPATPAPKQAPALS 912
Query: 147 SQNQSPRSAR---APHTAGAGPGP--GPEPRGRRSHSPLGFFSPSVPSRSPLP 194
+ SP+ AR AP A P P P P SP G + P +P P
Sbjct: 913 MTSSSPKKARATPAPKGIPASPSPKGAPTPPAATPPSPKGGPATPSPKWAPTP 965
>gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens]
Length = 904
Score = 50.8 bits (120), Expect = 2e-06
Identities = 48/166 (28%), Positives = 67/166 (40%), Gaps = 37/166 (22%)
Query: 114 QRVLGARRTEPRSAGERRRALPAAAGRKTKTWQSQNQSPRSARAPHTAGAGPGPGPEPRG 173
+R RR + RS RRR+ P RK +S ++SPR T P P PE +
Sbjct: 167 ERSRSPRRRKSRSPSPRRRSSPVRRERK----RSHSRSPRH----RTKSRSPSPAPEKKE 218
Query: 174 RRSHSP---LGFFSPSV------------PSRSPLPE-------------REPERTDDRS 205
+ P + PSV P P+PE +E E+T RS
Sbjct: 219 KTPELPEPSVKVKEPSVQEATSTSDILKVPKPEPIPEPKEPSPEKNSKKEKEKEKTRPRS 278
Query: 206 RVESSARAGDQRRGREPTSRDHRAATRRAAHGPFRR-RERRKPRPR 250
R S +R+ + R T R +R ++ P RR RR+P PR
Sbjct: 279 RSRSKSRSRTRSRSPSHTRPRRRHRSRSRSYSPRRRPSPRRRPSPR 324
Score = 47.4 bits (111), Expect = 2e-05
Identities = 66/256 (25%), Positives = 93/256 (36%), Gaps = 32/256 (12%)
Query: 7 KFRKKNKDEKNTSSGLQRQATHRDTPHLVTLGFCGTPGQKHFPKKPPLQSLPARRRAT-P 65
++R++N+ + S R V G G ++H P + S R++ T P
Sbjct: 484 QYRRQNQQSSSDSGSSSSSEDERPKRSHVKNGEVGRR-RRHSPSRSASPSPRKRQKETSP 542
Query: 66 RRRARVRVTPPVGRGGLLSSWSRAAPTPRS--AAEAPPGSAIPAHLPRSVQRVLGARRTE 123
R R R +PP R S AP PR PP P+ PR +R RR
Sbjct: 543 RGRRRRSPSPPPTRRRRSPS---PAPPPRRRRTPTPPPRRRTPSPPPR--RRSPSPRRYS 597
Query: 124 PRSAGERRRALPAAAGRKTKTWQSQNQSPRSARAPHTAGAGPGPGPEPRGRRSHSP--LG 181
P +RR P+ ++ R+A P P P P+ R SHSP
Sbjct: 598 PPI---QRRYSPSPPPKR-----------RTASPPPPPKRRASPSPPPKRRVSHSPPPKQ 643
Query: 182 FFSPSVPSRSPLPEREPERTDDRSRVESSARAGDQRRGREPTSRDHRAAT-------RRA 234
SP RSP + + SR AR+ + P+ R T RR
Sbjct: 644 RSSPVTKRRSPSLSSKHRKGSSPSRSTREARSPQPNKRHSPSPRPRAPQTSSSPPPVRRG 703
Query: 235 AHGPFRRRERRKPRPR 250
A +RR+ P R
Sbjct: 704 ASSSPQRRQSPSPSTR 719
Score = 45.1 bits (105), Expect = 1e-04
Identities = 60/231 (25%), Positives = 82/231 (35%), Gaps = 35/231 (15%)
Query: 49 PKKPPLQ-SLPARRR-------ATPRRRARVR--VTPPVGRGGLLSSWSRAAPTPRSAAE 98
PKKPP + S P R+ + PRRR R TPP +R +PTP+ +
Sbjct: 371 PKKPPKRTSSPPRKTRRLSPSASPPRRRHRPSPPATPPPK--------TRHSPTPQQSNR 422
Query: 99 APPG--SAIPAHLPRSVQRVLGARRTEPRSAGERRRALPAAAGRKTK--------TWQSQ 148
S P V + G + E S + R + + + K + Q +
Sbjct: 423 TRKSRVSVSPGRTSGKVTKHKGTEKRESPSPAPKPRKVELSESEEDKGGKMAAADSVQQR 482
Query: 149 NQSPRSARAPHTAGAGPGPGPEPRGRRSHSPLGFF------SPSVPSRSPLPEREPERTD 202
Q R + + + R +RSH G SPS S SP P + + T
Sbjct: 483 RQYRRQNQQSSSDSGSSSSSEDERPKRSHVKNGEVGRRRRHSPS-RSASPSPRKRQKETS 541
Query: 203 DRSRVESSARAGDQRRGREPTSRDHRAATRRAAHGPFRRRERRKPRPRSES 253
R R S RR R P+ R P RR PR RS S
Sbjct: 542 PRGRRRRSPSPPPTRRRRSPSPAPPPRRRRTPTPPPRRRTPSPPPRRRSPS 592
Score = 43.5 bits (101), Expect = 4e-04
Identities = 95/418 (22%), Positives = 142/418 (33%), Gaps = 74/418 (17%)
Query: 4 KSIKFRKKNKDEKNTSSGLQRQATHRDTPHLVTLGFCGTPGQKHFPKKPPLQSLPARRRA 63
K K ++K + + S + + R H + + + P++ P RRR
Sbjct: 266 KKEKEKEKTRPRSRSRSKSRSRTRSRSPSHTRPRRRHRSRSRSYSPRRRP----SPRRRP 321
Query: 64 TPRRRARVRVTPPVGRGGLLSS------WSRAAPTPRSAAEAPPGSAIPAHLP--RSVQR 115
+PRRR R PP R S S A+ + S++ + S P P R+
Sbjct: 322 SPRRRTPPRRMPPPPRHRRSRSPVRRRRRSSASLSGSSSSSSSSRSRSPPKKPPKRTSSP 381
Query: 116 VLGARRTEPRSAGERRR------ALPAAAGRKTKTWQSQNQSPRSARAPHTAGAGPGPGP 169
RR P ++ RRR A P R + T Q N++ R +R + G G
Sbjct: 382 PRKTRRLSPSASPPRRRHRPSPPATPPPKTRHSPTPQQSNRT-RKSRVSVSPGRTSGKVT 440
Query: 170 EPRGRRSHSPLGFFSPSVPSRSPLPEREPERTDDRSRVESSARAGDQRR----------- 218
+ +G SPS P+ P E +D+ ++A + QRR
Sbjct: 441 KHKGTEKRE-----SPS-PAPKPRKVELSESEEDKGGKMAAADSVQQRRQYRRQNQQSSS 494
Query: 219 --GREPTSRDHRAATRRAAHGPFRRRERRKPRPRSESSQLACHLDLCFKWLPVASSRRPV 276
G +S D R +G RR R P RS S S R+
Sbjct: 495 DSGSSSSSEDERPKRSHVKNGEVGRRRRHSP-SRSAS----------------PSPRKRQ 537
Query: 277 AEAEPGRPEFGSASTRGCEEGRRVPRGTGSTCLRTDGGSLCSEKTQTPEGGCETERPVSV 336
E P RG P T + +T TP T P
Sbjct: 538 KETSP----------RGRRRRSPSPPPTRRRRSPSPAPPPRRRRTPTPPPRRRTPSPPPR 587
Query: 337 RLALFICLLPRRLQPLI-----PAHPVRKQTAASPTATRRGRLPRAGQAGQAAHLRRP 389
R + PRR P I P+ P +++TA+ P +R P + +H P
Sbjct: 588 RRS----PSPRRYSPPIQRRYSPSPPPKRRTASPPPPPKRRASPSPPPKRRVSHSPPP 641
Score = 41.2 bits (95), Expect = 0.002
Identities = 63/311 (20%), Positives = 108/311 (34%), Gaps = 90/311 (28%)
Query: 43 PGQKHFPKKPPLQSLPARRRATPRRRARVRVTPPVGRGGLLSSWSRAAPTPRSAAEAPPG 102
P ++ P PP + P+ RR +P + R +PP R + S P R A+ +PP
Sbjct: 576 PPRRRTPSPPPRRRSPSPRRYSPPIQRRYSPSPPPKR----RTASPPPPPKRRASPSPPP 631
Query: 103 SAIPAHLPRSVQRV--LGARRTEPRSAGERRRALPAAAGRKTKTWQSQNQ---SPRSARA 157
+H P QR + RR+ S+ R+ + P+ + R+ ++ Q + SPR RA
Sbjct: 632 KRRVSHSPPPKQRSSPVTKRRSPSLSSKHRKGSSPSRSTREARSPQPNKRHSPSPRP-RA 690
Query: 158 PHTAGAGP-------------------------------------GPGPEPRGRR----- 175
P T+ + P P P+ R
Sbjct: 691 PQTSSSPPPVRRGASSSPQRRQSPSPSTRPIRRVSRTPEPKKIKKAASPSPQSVRRVSSS 750
Query: 176 ----------------------SHSPLGFFSPSVP---SRSPLPEREPERTDDRSRVESS 210
S SP +SP+VP ++SP P P R D+
Sbjct: 751 RSVSGSPEPAAKKPPAPPSPVQSQSPSTNWSPAVPVKKAKSPTPSPSPPRNSDQE----- 805
Query: 211 ARAGDQRRGREPTSRDHRAATRRAAHGPFRRRERRKPRPRSESSQLACHLDLCFKWLPVA 270
G ++ ++ + H+ + H ++ +K + + ++ A
Sbjct: 806 ---GGGKKKKKKKDKKHKKDKKHKKH-----KKHKKEKAVAAAAAAAVTPAAIAAATTTL 857
Query: 271 SSRRPVAEAEP 281
+ PVA EP
Sbjct: 858 AQEEPVAAPEP 868
Score = 32.0 bits (71), Expect = 1.1
Identities = 18/63 (28%), Positives = 29/63 (46%), Gaps = 4/63 (6%)
Query: 195 EREPERTDDRSRVESSARAGDQRRGREPTSRDHRAATRRAAHGPFRRRER----RKPRPR 250
+++ E D R + E + + R R P R R+ + R P RR + R PR R
Sbjct: 145 KKQDEDKDKRDKEEKESSREKRERSRSPRRRKSRSPSPRRRSSPVRRERKRSHSRSPRHR 204
Query: 251 SES 253
++S
Sbjct: 205 TKS 207
>gi|153251865 hypothetical protein LOC84226 [Homo sapiens]
Length = 1984
Score = 48.5 bits (114), Expect = 1e-05
Identities = 76/290 (26%), Positives = 104/290 (35%), Gaps = 37/290 (12%)
Query: 47 HFPKKPPLQSLPARRRATPRRRARVRVTPPVGRGGLLSSWSR-AAPTPRSAAEAPPGSAI 105
H P + + RR +P R+ P R SS R +P+ RS G +
Sbjct: 1631 HSPSQRSHRGPSQRRHHSPSERSH---RSPSERSHRSSSERRHRSPSQRSHR----GPSE 1683
Query: 106 PAHLPRSVQRVLGARRTEPRSAGERRRALPAAAGRKTKTWQSQNQSPRSARAPHTAGAGP 165
+H S +R + R ERR P+ ++ +S ++SP S R+ H+
Sbjct: 1684 RSHCSPSERRHRSPSQRSHRGPSERRHHSPSKRSHRSPARRS-HRSP-SERSHHSPSERS 1741
Query: 166 GPGPEPRGRRSHSPLGFFSPSVPS---------RSPLPERE--PERTDDRSRVESSARAG 214
P R S S SPS S RSP R P S E S +
Sbjct: 1742 HHSPSERRHHSPSERSHCSPSERSHCSPSERRHRSPSERRHHSPSEKSHHSPSERSHHSP 1801
Query: 215 DQRRGREPTSRD--------HRAATRRAAHGPFRRRERRKPRPRSESSQLACHLDLCFKW 266
+RR P R HR+ + R +H F R RR RS S HL +
Sbjct: 1802 SERRRHSPLERSRHSLLERSHRSPSERRSHRSFERSHRRISE-RSHSPSEKSHLSPLERS 1860
Query: 267 LPVASSRRPVAEAEPGR-----PEFGSASTRGCEEGRRVPRGTGSTCLRT 311
S RR + G+ E S G +GR R S+C RT
Sbjct: 1861 RCSPSERR--GHSSSGKTCHSPSERSHRSPSGMRQGRTSERSHRSSCERT 1908
Score = 47.4 bits (111), Expect = 2e-05
Identities = 39/135 (28%), Positives = 54/135 (40%), Gaps = 6/135 (4%)
Query: 120 RRTEPRSAGERRRALPAAAGRKTKTWQSQNQSPRSARAPHTAGAGPGPGPEPRGRRSHSP 179
R PR ER R P+ ++ + +SQ S R H+ P + S S
Sbjct: 1546 RERTPRGPSERTRHNPSWRNHRSPSERSQRSSLE--RRHHSPSQRSHCSPSRKNHSSPSE 1603
Query: 180 LGFFSPSVPSRSPLPEREPERTDDR---SRVESSARAGDQRRGREPTSRDHRAATRRAAH 236
+ SPS + PER +R S + S R QRR P+ R HR+ + R +H
Sbjct: 1604 RSWRSPSQRNHCSPPERSCHSLSERGLHSPSQRSHRGPSQRRHHSPSERSHRSPSER-SH 1662
Query: 237 GPFRRRERRKPRPRS 251
R R P RS
Sbjct: 1663 RSSSERRHRSPSQRS 1677
Score = 46.6 bits (109), Expect = 4e-05
Identities = 47/155 (30%), Positives = 61/155 (39%), Gaps = 26/155 (16%)
Query: 125 RSAGERRRALPA-----AAGRKT------KTWQSQNQ----SPR-------SARAPHTAG 162
RS+ ERR P+ + RK ++W+S +Q SP S R H+
Sbjct: 1575 RSSLERRHHSPSQRSHCSPSRKNHSSPSERSWRSPSQRNHCSPPERSCHSLSERGLHSPS 1634
Query: 163 AGPGPGPEPRGRRSHSPLGFFSPSVPSRSPLPERE---PERTDDRSRVESSARAGDQRRG 219
GP R S S SPS S ER P + R E S + +RR
Sbjct: 1635 QRSHRGPSQRRHHSPSERSHRSPSERSHRSSSERRHRSPSQRSHRGPSERSHCSPSERRH 1694
Query: 220 REPTSRDHRAATRRAAHGPFRRRERRKPRPRSESS 254
R P+ R HR + R H P +R R P RS S
Sbjct: 1695 RSPSQRSHRGPSERRHHSP-SKRSHRSPARRSHRS 1728
Score = 43.1 bits (100), Expect = 5e-04
Identities = 64/259 (24%), Positives = 91/259 (35%), Gaps = 19/259 (7%)
Query: 47 HFPKKPPLQSLPARRRATPRRRA------RVRVTPPVGRGGLLSSWSRAAPTPRSAAEAP 100
H P + S + ++P R+ R +PP LS +P+ RS
Sbjct: 1583 HSPSQRSHCSPSRKNHSSPSERSWRSPSQRNHCSPPERSCHSLSERGLHSPSQRSHR--- 1639
Query: 101 PGSAIPAHLPRSVQRVLGARRTEPRSAGERRRALPAAAGRKTKTWQSQ-NQSPRSARAPH 159
G + H S + RS+ ERR P+ + + +S + S R R+P
Sbjct: 1640 -GPSQRRHHSPSERSHRSPSERSHRSSSERRHRSPSQRSHRGPSERSHCSPSERRHRSP- 1697
Query: 160 TAGAGPGPGPEPRGRRSHSPLGFFSPSVPSRSPLPEREPERTDDRSRVESSARAGDQRRG 219
+ + GP RR HSP S RS R P S E S + +RR
Sbjct: 1698 SQRSHRGPSE----RRHHSPSKRSHRSPARRS---HRSPSERSHHSPSERSHHSPSERRH 1750
Query: 220 REPTSRDHRAATRRAAHGPFRRRERRKPRPRSESSQLACHLDLCFKWLPVASSRRPVAEA 279
P+ R H + + R+ P RR R R S H + S RR +
Sbjct: 1751 HSPSERSHCSPSERSHCSPSERRHRSPSERRHHSPSEKSHHSPSERSHHSPSERRRHSPL 1810
Query: 280 EPGRPEFGSASTRGCEEGR 298
E R S R E R
Sbjct: 1811 ERSRHSLLERSHRSPSERR 1829
Score = 38.5 bits (88), Expect = 0.011
Identities = 47/182 (25%), Positives = 66/182 (36%), Gaps = 11/182 (6%)
Query: 126 SAGERRRALPAAAGRKTKTWQSQNQSPRSARAPHTAGAGPGPGPEPRGRRSHSPLGFFSP 185
S ERR P+ + + +S + SP S R+ H+ P R R S SP
Sbjct: 1768 SPSERRHRSPSERRHHSPSEKSHH-SP-SERSHHSPSERRRHSPLERSRHSLLERSHRSP 1825
Query: 186 SVPSRSPLPEREPERTDDRSRV--ESSARAGDQRRGREPTSRDHRAATRRAAHGPFRRRE 243
S ER R +RS E S + +R P+ R +++ + H P R
Sbjct: 1826 SERRSHRSFERSHRRISERSHSPSEKSHLSPLERSRCSPSERRGHSSSGKTCHSPSERSH 1885
Query: 244 RRKPRPRSESSQLACHLDLCFKWLPVASSRRPVAEAEPGRPEFGSASTRGCEEGRRVPRG 303
R R + H C + +R +E PGRP G E RR P
Sbjct: 1886 RSPSGMRQGRTSERSHRSSCER------TRHSPSEMRPGRPS-GRNHCSPSERSRRSPLK 1938
Query: 304 TG 305
G
Sbjct: 1939 EG 1940
Score = 34.7 bits (78), Expect = 0.16
Identities = 46/197 (23%), Positives = 71/197 (36%), Gaps = 34/197 (17%)
Query: 88 RAAPTPRSAAEAPPGSAIPAHLPRSVQRVLGARRTEPRSAGERRRALPA-AAGRKTKTWQ 146
R+A PR A P P LP+ G + S G+ R + ++ R K +
Sbjct: 1436 RSAQQPRRAYSFQPR---PLRLPKPTDSQSGIA-FQTASVGQPLRTVQKDSSSRSKKNFY 1491
Query: 147 SQNQSPRSARAPHTAGAGPGPGPEPRGR---------------------RSHSPLGFFSP 185
S + ++ T PG + RGR + H+ F+
Sbjct: 1492 RNETSSQESKNLST----PGTRVQARGRILPGSPVKRTWHRHLKDKLTHKEHNHPSFYRE 1547
Query: 186 SVP-SRSPLPEREPERTDDRSRVESSARAGDQRRGREPTSRDHRAATRRAAHGPFRRRER 244
P S P + RS E S R+ +RR P+ R H + +R+ P R
Sbjct: 1548 RTPRGPSERTRHNPSWRNHRSPSERSQRSSLERRHHSPSQRSHCSPSRKNHSSP-SERSW 1606
Query: 245 RKPRPRSESS--QLACH 259
R P R+ S + +CH
Sbjct: 1607 RSPSQRNHCSPPERSCH 1623
Score = 33.5 bits (75), Expect = 0.37
Identities = 60/233 (25%), Positives = 80/233 (34%), Gaps = 29/233 (12%)
Query: 47 HFPKKPPLQSLPARRRATPRRRA------RVRVTPPVGRGGLLSSWSRAAPTPRSAAEAP 100
H P K +S R +P R+ R +P R S S +P+ RS
Sbjct: 1711 HSPSKRSHRSPARRSHRSPSERSHHSPSERSHHSPSERRHHSPSERSHCSPSERSHCSPS 1770
Query: 101 PG-----SAIPAHLPRSVQRVLGARRTEPRSAGERRRALPAAAGRKTKTWQSQNQSPRSA 155
S H P + R+ S ERRR P R + +S ++SP
Sbjct: 1771 ERRHRSPSERRHHSPSEKSHHSPSERSH-HSPSERRRHSPLERSRHSLLERS-HRSPSER 1828
Query: 156 RAPHTAGAGPGPGPEPRGRRSHSPL--GFFSPSVPSRSPLPEREPERTDDR---SRVESS 210
R+ + E RSHSP SP SR ER + + S E S
Sbjct: 1829 RSHRSFERSHRRISE----RSHSPSEKSHLSPLERSRCSPSERRGHSSSGKTCHSPSERS 1884
Query: 211 ARAGDQRRGREPTSRDHRAATRRAAHGPFRRRERR-------KPRPRSESSQL 256
R+ R + R HR++ R H P R R P RS S L
Sbjct: 1885 HRSPSGMRQGRTSERSHRSSCERTRHSPSEMRPGRPSGRNHCSPSERSRRSPL 1937
>gi|239748777 PREDICTED: hypothetical protein [Homo sapiens]
Length = 350
Score = 46.6 bits (109), Expect = 4e-05
Identities = 59/190 (31%), Positives = 73/190 (38%), Gaps = 40/190 (21%)
Query: 60 RRRATPRRRARVRVTPPVGRGGLLSSW-SRAAPTPRSAAEA---------PPG------- 102
R +AT A V R + W SRA P PRSA+ A PPG
Sbjct: 3 REKATEEAAAPPGVAESPARPRVNEQWGSRAHPNPRSASSAAAAASSSFPPPGFIHPPSS 62
Query: 103 --------SAIPAHLPRSVQRVL-GARRTEPRSAGERRRALPAAAGRKTKTWQSQNQSPR 153
A PA PR + RVL GA AG R RA AAA + + R
Sbjct: 63 RAAVHSRLRAAPAAAPRLLPRVLAGAPARTGALAGSRLRAAAAAAHDQEAAAPTGR---R 119
Query: 154 SARAPHTAGAGPGPGPEPRGRRSHSPLGFFSPSVPSRSPLPEREPERTDDRSRVESSARA 213
R P GP P +PR R H+ + +VP +PL R P T R++ R+
Sbjct: 120 WRRRP-----GPSPPLQPRSRHPHTR---YPRAVPEATPL--RPPPGTRPRAKSRPGCRS 169
Query: 214 GD-QRRGREP 222
R R P
Sbjct: 170 SPFPARSRTP 179
Score = 39.3 bits (90), Expect = 0.007
Identities = 55/199 (27%), Positives = 64/199 (32%), Gaps = 15/199 (7%)
Query: 57 LPARRRATPRRRARVRVTPPVGRGGLLSSWSRAAPTPR--SAAEAPPG---SAIPAHLPR 111
L A A PR RV P G L S RAA A AP G P P
Sbjct: 70 LRAAPAAAPRLLPRVLAGAPARTGALAGSRLRAAAAAAHDQEAAAPTGRRWRRRPGPSPP 129
Query: 112 SVQRVLGARRTEPRSAGERRRALPAAAGR-KTKTWQSQNQSPRSARAPHTAGAGPGPG-P 169
R PR+ E P R + K+ SP AR+ AGP G P
Sbjct: 130 LQPRSRHPHTRYPRAVPEATPLRPPPGTRPRAKSRPGCRSSPFPARSRTPGEAGPPRGDP 189
Query: 170 EPRGRRSHSPLGFFSPSVPSRSPLPEREPERTDDRSRVESSARAGDQRRGREPTSRDHRA 229
PR R P RSP P + + RA + +P
Sbjct: 190 RPRAPRPGDH--------PRRSPALRETPSLSPPSPGRRNGKRAAGKGTTPQPQPPPPPC 241
Query: 230 ATRRAAHGPFRRRERRKPR 248
ATRR R R+R R
Sbjct: 242 ATRREEDMALRTRDRTSSR 260
>gi|21040326 SON DNA-binding protein isoform F [Homo sapiens]
Length = 2426
Score = 46.6 bits (109), Expect = 4e-05
Identities = 49/186 (26%), Positives = 71/186 (38%), Gaps = 18/186 (9%)
Query: 60 RRRATPRRRARVRVTPPVGRGGLLSSWSRAAPTPRSAAEAPPGSAIPAHLPRSVQRVLGA 119
+R + R RAR R + S SR+ RS+ S + RSV +
Sbjct: 1838 KRTSESRSRARKRSSKSKSHRSQTRSRSRSRRRRRSSR-----SRSKSRGRRSVSKEKRK 1892
Query: 120 RRTEPRSAGERRRALPAAAGRKTKTWQSQNQSPRSARAPHTAGAGPGPGPEPRGRRSHSP 179
R + RS R+ +++ KT ++++++P HT P RR
Sbjct: 1893 RSPKHRSKSRERKRKRSSSRDNRKTVRARSRTPSRRSRSHT----------PSRRRRSRS 1942
Query: 180 LG---FFSPSVPSRSPLPEREPERTDDRSRVESSARAGDQRRGREPTSRDHRAATRRAAH 236
+G FS S RS P R RSR S RR R P+ R + RR +
Sbjct: 1943 VGRRRSFSISPSRRSRTPSRRSRTPSRRSRTPSRRSRTPSRRSRTPSRRSRTPSRRRRSR 2002
Query: 237 GPFRRR 242
RRR
Sbjct: 2003 SVVRRR 2008
Score = 35.0 bits (79), Expect = 0.13
Identities = 57/265 (21%), Positives = 92/265 (34%), Gaps = 24/265 (9%)
Query: 119 ARRTEPRSAGERRRALPAAAGRKTKTWQSQNQSPRSARAPHTAGAGPGPGPEPRGR---R 175
+++ + R GE+ + ++ ++K +S R + + A R R
Sbjct: 1803 SKKNKNRDKGEKEKKRDSSLRSRSKRSKSSEHKSRKRTSESRSRARKRSSKSKSHRSQTR 1862
Query: 176 SHSPLGFFSPSVPSRSPLPEREPERTDDRSRVESSARAGDQRRGREPTSRDHRAATRRAA 235
S S S SRS R + R R +R+ + +SRD+R R +
Sbjct: 1863 SRSRSRRRRRSSRSRSKSRGRRSVSKEKRKRSPKHRSKSRERKRKRSSSRDNRKTVRARS 1922
Query: 236 HGPFRRRERRKPRPRSESSQLACHLDLCFKWLPVASSRRPVAEAEPGRPEFGSASTRGCE 295
P RR P R S + F P SR P + + S R
Sbjct: 1923 RTPSRRSRSHTPSRRRRSRSVGRRRS--FSISPSRRSRTPSRRSRTPSRRSRTPSRRSRT 1980
Query: 296 EGRRVPRGTGSTCLRTDGGSLCSEKTQTPEGGCETERPVSVRLALFICLLPRRLQPLIPA 355
RR RT S +++TP R SV + P RL+
Sbjct: 1981 PSRR---------SRTP-----SRRSRTPS---RRRRSRSVVRRRSFSISPVRLRR--SR 2021
Query: 356 HPVRKQTAASPTATRRGRLPRAGQA 380
P+R++ + SP +R R G++
Sbjct: 2022 TPLRRRFSRSPIRRKRSRSSERGRS 2046
>gi|21040314 SON DNA-binding protein isoform B [Homo sapiens]
Length = 2303
Score = 46.6 bits (109), Expect = 4e-05
Identities = 49/186 (26%), Positives = 71/186 (38%), Gaps = 18/186 (9%)
Query: 60 RRRATPRRRARVRVTPPVGRGGLLSSWSRAAPTPRSAAEAPPGSAIPAHLPRSVQRVLGA 119
+R + R RAR R + S SR+ RS+ S + RSV +
Sbjct: 1838 KRTSESRSRARKRSSKSKSHRSQTRSRSRSRRRRRSSR-----SRSKSRGRRSVSKEKRK 1892
Query: 120 RRTEPRSAGERRRALPAAAGRKTKTWQSQNQSPRSARAPHTAGAGPGPGPEPRGRRSHSP 179
R + RS R+ +++ KT ++++++P HT P RR
Sbjct: 1893 RSPKHRSKSRERKRKRSSSRDNRKTVRARSRTPSRRSRSHT----------PSRRRRSRS 1942
Query: 180 LG---FFSPSVPSRSPLPEREPERTDDRSRVESSARAGDQRRGREPTSRDHRAATRRAAH 236
+G FS S RS P R RSR S RR R P+ R + RR +
Sbjct: 1943 VGRRRSFSISPSRRSRTPSRRSRTPSRRSRTPSRRSRTPSRRSRTPSRRSRTPSRRRRSR 2002
Query: 237 GPFRRR 242
RRR
Sbjct: 2003 SVVRRR 2008
Score = 35.0 bits (79), Expect = 0.13
Identities = 57/265 (21%), Positives = 92/265 (34%), Gaps = 24/265 (9%)
Query: 119 ARRTEPRSAGERRRALPAAAGRKTKTWQSQNQSPRSARAPHTAGAGPGPGPEPRGR---R 175
+++ + R GE+ + ++ ++K +S R + + A R R
Sbjct: 1803 SKKNKNRDKGEKEKKRDSSLRSRSKRSKSSEHKSRKRTSESRSRARKRSSKSKSHRSQTR 1862
Query: 176 SHSPLGFFSPSVPSRSPLPEREPERTDDRSRVESSARAGDQRRGREPTSRDHRAATRRAA 235
S S S SRS R + R R +R+ + +SRD+R R +
Sbjct: 1863 SRSRSRRRRRSSRSRSKSRGRRSVSKEKRKRSPKHRSKSRERKRKRSSSRDNRKTVRARS 1922
Query: 236 HGPFRRRERRKPRPRSESSQLACHLDLCFKWLPVASSRRPVAEAEPGRPEFGSASTRGCE 295
P RR P R S + F P SR P + + S R
Sbjct: 1923 RTPSRRSRSHTPSRRRRSRSVGRRRS--FSISPSRRSRTPSRRSRTPSRRSRTPSRRSRT 1980
Query: 296 EGRRVPRGTGSTCLRTDGGSLCSEKTQTPEGGCETERPVSVRLALFICLLPRRLQPLIPA 355
RR RT S +++TP R SV + P RL+
Sbjct: 1981 PSRR---------SRTP-----SRRSRTPS---RRRRSRSVVRRRSFSISPVRLRR--SR 2021
Query: 356 HPVRKQTAASPTATRRGRLPRAGQA 380
P+R++ + SP +R R G++
Sbjct: 2022 TPLRRRFSRSPIRRKRSRSSERGRS 2046
>gi|187829730 BCL2 binding component 3 isoform 1 [Homo sapiens]
Length = 261
Score = 46.2 bits (108), Expect = 5e-05
Identities = 47/153 (30%), Positives = 59/153 (38%), Gaps = 25/153 (16%)
Query: 40 CGTPGQKHFPKKPPLQSLPARRRATPRRRARVRVTPPVGRGGLLSSWSRAAPTPRSAAEA 99
CG P ++H P+ P Q ARR PRR A + PP G +L RA P R
Sbjct: 29 CG-PRERHGPRTPGGQLPGARRGPGPRRPAPLPARPPGALGSVLRP-LRARPGCRPRRPH 86
Query: 100 PPGSAIPAHLPRSVQR---------VLGARRTEPRSAGERRRALPAAAGRKTKTWQSQNQ 150
P +P R +R G+ + PR A R AL A G
Sbjct: 87 PAARCLPLRPHRPTRRHRRPGGFPLAWGSPQPAPRPAPGRSSALALAGG----------A 136
Query: 151 SPRSARAPHTAGAG----PGPGPEPRGRRSHSP 179
+P ARA G+G PG PRG + P
Sbjct: 137 APGVARAQRPGGSGGRSHPGGPGSPRGGGTVGP 169
>gi|221139764 PHD and ring finger domains 1 [Homo sapiens]
Length = 1648
Score = 45.8 bits (107), Expect = 7e-05
Identities = 66/250 (26%), Positives = 98/250 (39%), Gaps = 37/250 (14%)
Query: 51 KPPLQSLPARRRATPRRRARVRVTPPVGRGGLLSSWSRAAPTPRSAAEAPPGSAIPAHLP 110
+PP +S + ++ R RV+ GR S +R+ RS+ A P ++ P
Sbjct: 987 RPPSRSRSTSSSRSRKKAKRKRVSREHGR---TRSGTRSESRDRSSRSASP--SVGEERP 1041
Query: 111 RSVQRVLGARRTEPRSAGERRRALPAAA------------GRKTKTWQSQNQSPRSARAP 158
R + +RR+ + R RA A G +T +S++ SP S+
Sbjct: 1042 RRQRSKAKSRRSSSDRSSSRERAKRKKAKDKSREHRRGPWGHSRRTSRSRSGSPGSSSYE 1101
Query: 159 HTAGAGPGP---GPEPRGRRSHSPLGFFSPSVPSRSPLPEREPERTDDRSRVESSARAGD 215
H PRGR SP + ER ER D + V + R
Sbjct: 1102 HYESRKKKKRRSASRPRGREC-SPTSSLERLCRHKHQR-ERSHERPDRKESV-AWPRDRR 1158
Query: 216 QRRGREPTSRDHRAATRRAAHGPFRRRERRKPRPRSESSQLACHLDLCFKWLPVASSRRP 275
+RR R P+S +HRA RE R+PR R + Q H K +S P
Sbjct: 1159 KRRSRSPSS-EHRA------------REHRRPRSREKWPQTRSHSPE-RKGAVREASPAP 1204
Query: 276 VAEAEPGRPE 285
+A+ EPGR +
Sbjct: 1205 LAQGEPGRED 1214
Score = 37.7 bits (86), Expect = 0.019
Identities = 44/157 (28%), Positives = 61/157 (38%), Gaps = 26/157 (16%)
Query: 98 EAPPGSAIPAHLPRSVQRVLGARRTEPRSAGERRRALPAAAGRKTKTWQSQNQSPRSARA 157
EAPP P L + RV+ R P + R T + +S+ ++ R +
Sbjct: 968 EAPPS---PDVLQAATHRVVELR--------------PPSRSRSTSSSRSRKKAKRKRVS 1010
Query: 158 PHTAGAGPGPGPEPRGRRSHSPLGFFSPSVPSRSPLPEREPERTDDRSRVESSARAGDQR 217
G E R R S S SPSV P +R ++ S SS+R +R
Sbjct: 1011 REHGRTRSGTRSESRDRSSRSA----SPSVGEERPRRQRSKAKSRRSSSDRSSSRERAKR 1066
Query: 218 RGREPTSRDHRAATRRAAHGPFRRRER-RKPRPRSES 253
+ + SR+H RR G RR R R P S S
Sbjct: 1067 KKAKDKSREH----RRGPWGHSRRTSRSRSGSPGSSS 1099
>gi|41152076 steroid-sensitive protein 1 [Homo sapiens]
Length = 950
Score = 45.4 bits (106), Expect = 9e-05
Identities = 62/223 (27%), Positives = 88/223 (39%), Gaps = 35/223 (15%)
Query: 7 KFRKKNKDEKNTSSGLQRQ--ATHRDTPHLVTLGFCGTPGQKHFPKK---PP-------- 53
K R+K +K +SG++ Q A D G+ +K P++ PP
Sbjct: 271 KIRQKGFVQKCKASGVEGQVVAEGNDGGGGAGRPSLGSEKKKEDPRRAQVPPTRESRVKV 330
Query: 54 LQSLPARRRATPRRRARVRVT--PPVGRGGLLSSWSRA---APTPRSAAEAP----PGSA 104
L+ L A A P+ + R T PP + S SRA A P + P P +
Sbjct: 331 LRKLAATAPALPQPPSTPRATTLPPAPATTVTRSTSRAVTVAARPMTTTAFPTTQRPWTP 390
Query: 105 IPAHLPRSVQRVLGARRTE------PRSAGERRRALPAAAGRKTKTWQSQ---NQSPRSA 155
P+H P + V+ ARR P S ++ R P R +K + N P +
Sbjct: 391 SPSHRPPTTTEVITARRPSVSENLYPPSRKDQHRERPQTTRRPSKATSLESFTNAPPTTI 450
Query: 156 RAPHTAGAGPGPGPEPR-GRRSHSPLGFFSPSVPSRSPLPERE 197
P T AGPG + R RR H G P+V P P +E
Sbjct: 451 SEPSTRAAGPGRFRDNRMDRREH---GHRDPNVVPGPPKPAKE 490
>gi|41152074 steroid-sensitive protein 1 [Homo sapiens]
Length = 950
Score = 45.4 bits (106), Expect = 9e-05
Identities = 62/223 (27%), Positives = 88/223 (39%), Gaps = 35/223 (15%)
Query: 7 KFRKKNKDEKNTSSGLQRQ--ATHRDTPHLVTLGFCGTPGQKHFPKK---PP-------- 53
K R+K +K +SG++ Q A D G+ +K P++ PP
Sbjct: 271 KIRQKGFVQKCKASGVEGQVVAEGNDGGGGAGRPSLGSEKKKEDPRRAQVPPTRESRVKV 330
Query: 54 LQSLPARRRATPRRRARVRVT--PPVGRGGLLSSWSRA---APTPRSAAEAP----PGSA 104
L+ L A A P+ + R T PP + S SRA A P + P P +
Sbjct: 331 LRKLAATAPALPQPPSTPRATTLPPAPATTVTRSTSRAVTVAARPMTTTAFPTTQRPWTP 390
Query: 105 IPAHLPRSVQRVLGARRTE------PRSAGERRRALPAAAGRKTKTWQSQ---NQSPRSA 155
P+H P + V+ ARR P S ++ R P R +K + N P +
Sbjct: 391 SPSHRPPTTTEVITARRPSVSENLYPPSRKDQHRERPQTTRRPSKATSLESFTNAPPTTI 450
Query: 156 RAPHTAGAGPGPGPEPR-GRRSHSPLGFFSPSVPSRSPLPERE 197
P T AGPG + R RR H G P+V P P +E
Sbjct: 451 SEPSTRAAGPGRFRDNRMDRREH---GHRDPNVVPGPPKPAKE 490
>gi|169167740 PREDICTED: hypothetical protein [Homo sapiens]
Length = 302
Score = 45.1 bits (105), Expect = 1e-04
Identities = 40/129 (31%), Positives = 53/129 (41%), Gaps = 13/129 (10%)
Query: 100 PPGSAIPAHLPRSVQRVLGARRTEPRSAGERRRALPAAAGRKTKTWQSQNQS---PRSAR 156
PPG A P H PR + + + S + R LPA + TW +S PR AR
Sbjct: 118 PPGRAPPRHAPRFPRPRMRFPQAWKASRAKEPRGLPA----QRPTWGPGTRSRGPPRQAR 173
Query: 157 APHTAGAGPGPGPEPRGRRSHSPLGFFSPSVPSRSPLPEREPERTDDRSRVESSARAGDQ 216
+ H + P PE RG + P VP R P+ R+ R SA G
Sbjct: 174 SQHPERS---PEPEGRGNHARKPAAL---PVPGRFPIRPVLGGRSGPGDRSLRSAHLGGA 227
Query: 217 RRGREPTSR 225
+GR T+R
Sbjct: 228 GQGRPWTAR 236
>gi|89276756 serine/threonine-protein kinase PRP4K [Homo sapiens]
Length = 1007
Score = 45.1 bits (105), Expect = 1e-04
Identities = 43/170 (25%), Positives = 65/170 (38%), Gaps = 33/170 (19%)
Query: 117 LGARRTEPRSAGERRRALPAAAGRKTKTWQSQNQSPRSARAPHTAGAGPG---------P 167
L + + RS + R++ + ++ K +S ++ S + + PG P
Sbjct: 298 LRGKSKDRRSRSKERKSKRSETDKEKKPIKSPSKDASSGKENRSPSRRPGRSPKRRSLSP 357
Query: 168 GPEPRGRRSHSPLGFFSPSVPSRSPLPEREPERTDDRSRVESSARAGDQRRGREPTSR-- 225
P + RRS SPL S S+SP P R +E R ++RR P +R
Sbjct: 358 KPRDKSRRSRSPLLNDRRSKQSKSPSRTLSPGRRAKSRSLERKRREPERRRLSSPRTRPR 417
Query: 226 ----------------DHRAATRRAAHGPFRRRER------RKPRPRSES 253
+ + TRR + P RRR R R PR RS S
Sbjct: 418 DDILSRRERSKDASPINRWSPTRRRSRSPIRRRSRSPLRRSRSPRRRSRS 467
Score = 44.3 bits (103), Expect = 2e-04
Identities = 39/131 (29%), Positives = 58/131 (44%), Gaps = 15/131 (11%)
Query: 172 RGRRSHSPLGFFSPSVPSRSPLPEREPERTD-DRSRVESSARAGDQRRGREPTSRDHRAA 230
RG++S SP+ S RS ER+ +R++ D+ + + + D G+E +R+
Sbjct: 288 RGKKSRSPVDLRGKSKDRRSRSKERKSKRSETDKEKKPIKSPSKDASSGKE-----NRSP 342
Query: 231 TRRAAHGPFRRRERRKPRPRSESSQLACHLDLCFKWLPVASSRRPVAEAEPGRPEFGSAS 290
+RR P RR KPR +S S+ D K S+ P PGR A
Sbjct: 343 SRRPGRSPKRRSLSPKPRDKSRRSRSPLLNDRRSK-----QSKSPSRTLSPGR----RAK 393
Query: 291 TRGCEEGRRVP 301
+R E RR P
Sbjct: 394 SRSLERKRREP 404
Score = 41.2 bits (95), Expect = 0.002
Identities = 58/228 (25%), Positives = 92/228 (40%), Gaps = 22/228 (9%)
Query: 3 KKSIKFRKKNKDEKNTSSGLQ--RQATHRDTPHLVTLGFCGTPGQKH-FPKKPPLQSLPA 59
+ + R K+KD ++ S + R T ++ + + + G+++ P + P +S P
Sbjct: 293 RSPVDLRGKSKDRRSRSKERKSKRSETDKEKKPIKSPSKDASSGKENRSPSRRPGRS-PK 351
Query: 60 RRRATPRRRARVRVTPPVGRGGLLSSWSRAAPTPRSAAEAPPGSAIPAHLPRSVQRVLGA 119
RR +P+ R + R + R LL+ R+ + + PG R+ R L
Sbjct: 352 RRSLSPKPRDKSRRS----RSPLLND-RRSKQSKSPSRTLSPGR-------RAKSRSLER 399
Query: 120 RRTEPRSAGERRRALPAAAGRKTKTWQSQNQSPRSARAPHTAGAGPGPGPEPRGRRSHSP 179
+R EP RR L + R S+ + + A + P RRS SP
Sbjct: 400 KRREPE-----RRRLSSPRTRPRDDILSRRERSKDASPINRWSPTRRRSRSPIRRRSRSP 454
Query: 180 LGFF-SPSVPSRSPLPEREPERTDDRSRVESSARAGDQRRGREPTSRD 226
L SP SRSP R+ R R S +R G +RR R D
Sbjct: 455 LRRSRSPRRRSRSPRRRDRGRRSRSRLRRRSRSRGGRRRRSRSKVKED 502
Score = 32.7 bits (73), Expect = 0.62
Identities = 35/133 (26%), Positives = 54/133 (40%), Gaps = 10/133 (7%)
Query: 125 RSAGERRRALPAAAGRKTKTWQSQNQSPRSARAPHTAGAGPGPGPEP---RGRRSHSPLG 181
R G++ R+ P K+K +S+++ +S R+ P P G+ + SP
Sbjct: 286 RDRGKKSRS-PVDLRGKSKDRRSRSKERKSKRSETDKEKKPIKSPSKDASSGKENRSP-- 342
Query: 182 FFSPSVPSRSPLPEREPERTDDRSRVESSARAGDQRRGREPTSRDHRAATRRAAHGPFRR 241
P RSP + D+SR S D RR ++ S + R A
Sbjct: 343 ---SRRPGRSPKRRSLSPKPRDKSRRSRSPLLND-RRSKQSKSPSRTLSPGRRAKSRSLE 398
Query: 242 RERRKPRPRSESS 254
R+RR+P R SS
Sbjct: 399 RKRREPERRRLSS 411
>gi|182507165 thymus expressed gene 3-like [Homo sapiens]
Length = 629
Score = 45.1 bits (105), Expect = 1e-04
Identities = 64/242 (26%), Positives = 90/242 (37%), Gaps = 25/242 (10%)
Query: 38 GFCGTPGQKHFPKKPPLQSLPARRRATPRRRARVR------VTPPVGRGGLLSSW-SRAA 90
G G P +++ ++ P + P+ A P R + +P SSW S AA
Sbjct: 274 GADGGPRRQNSVRQRPPDASPSPGSARPAREPSLERVGGHPTSPAALSRAWASSWESEAA 333
Query: 91 PTPRS--AAEAPPGSAIPAHLPRSVQRVLGARRTEPRSAGE--RRRALPAAAGRKTKTWQ 146
P P + AA +PP S L ++ Q + GA+ G RR+ P GR +
Sbjct: 334 PEPAAPPAAPSPPDSPAEGRLVKA-QYIPGAQAATRGLPGRAARRKPPPLTRGRSVEQ-S 391
Query: 147 SQNQSPRSARAPHTAGAGPGPGPEPRGRRSH------SPLGFFS--PSVPSRSPLPEREP 198
+ PR+A G PR R++ S LG S PS P + P ERE
Sbjct: 392 PPRERPRAAGRRGRMAEASGRRGSPRARKASRSQSETSLLGRASAVPSGPPKYPTAEREE 451
Query: 199 ERTDDRSR----VESSARAGDQRRGREPTSRDHRAATRRAAHGPFRRRERRKPRPRSESS 254
R R ++ AG RR R D R P R P P +
Sbjct: 452 PRPPRPRRGPAPTLAAQAAGSCRRWRSTAEIDAADGRRVRPRAPAARVPGPGPSPSAPQR 511
Query: 255 QL 256
+L
Sbjct: 512 RL 513
>gi|113416994 PREDICTED: hypothetical protein [Homo sapiens]
Length = 302
Score = 44.7 bits (104), Expect = 2e-04
Identities = 40/129 (31%), Positives = 53/129 (41%), Gaps = 13/129 (10%)
Query: 100 PPGSAIPAHLPRSVQRVLGARRTEPRSAGERRRALPAAAGRKTKTWQSQNQS---PRSAR 156
PPG A P H PR + + + S + R LPA + TW +S PR AR
Sbjct: 118 PPGRAPPRHAPRFPRPRMRFPQAWKASRAKEPRGLPA----QRPTWGPGTRSRGPPRRAR 173
Query: 157 APHTAGAGPGPGPEPRGRRSHSPLGFFSPSVPSRSPLPEREPERTDDRSRVESSARAGDQ 216
+ H + P PE RG + P VP R P+ R+ R SA G
Sbjct: 174 SQHPERS---PEPEGRGNHARKPAAL---PVPGRFPIRPVLGGRSGPGDRSLRSAHLGGA 227
Query: 217 RRGREPTSR 225
+GR T+R
Sbjct: 228 GQGRPWTAR 236
Score = 30.0 bits (66), Expect = 4.0
Identities = 60/243 (24%), Positives = 72/243 (29%), Gaps = 69/243 (28%)
Query: 154 SARAPHTAGAG--------PGPGPEPRGRRSHSPLGFFSPSVPSRSPLPEREPERTDDRS 205
SA AP AG G P G + R H P G P R P P + S
Sbjct: 86 SAEAPAPAGPGTTRRAGHMPASG-QVEARNDHRPPGRAPPRHAPRFPRPRMRFPQAWKAS 144
Query: 206 RVESSARAGDQRRGREPTSRDHRAATRRAAHGPFRRRERRKPRPRSESSQLACHLDLCFK 265
R + QR P +R + GP RR + P E H
Sbjct: 145 RAKEPRGLPAQRPTWGPGTR---------SRGPPRRARSQHPERSPEPEGRGNH------ 189
Query: 266 WLPVASSRRPVAEAEPG----RPEFGSASTRGCEEGRRVPRGTGSTCLRTDGGSLCSEKT 321
+R+P A PG RP G S G G LR+
Sbjct: 190 ------ARKPAALPVPGRFPIRPVLGGRS------------GPGDRSLRS---------- 221
Query: 322 QTPEGGCETERPVSVRLALFICLLPRRLQPLIPAHPVRKQTAASPTATRRGRLPRAGQAG 381
GG RP + R P IP R + A S T R PR A
Sbjct: 222 -AHLGGAGQGRPWTAR------------PPPIPHTRPRPKCACSAPGTNRNLGPRVAGAN 268
Query: 382 QAA 384
+A
Sbjct: 269 HSA 271
>gi|113416470 PREDICTED: hypothetical protein [Homo sapiens]
Length = 302
Score = 44.7 bits (104), Expect = 2e-04
Identities = 40/129 (31%), Positives = 53/129 (41%), Gaps = 13/129 (10%)
Query: 100 PPGSAIPAHLPRSVQRVLGARRTEPRSAGERRRALPAAAGRKTKTWQSQNQS---PRSAR 156
PPG A P H PR + + + S + R LPA + TW +S PR AR
Sbjct: 118 PPGRAPPRHAPRFPRPRMRFPQAWKASRAKEPRGLPA----QRPTWGPGTRSRGPPRRAR 173
Query: 157 APHTAGAGPGPGPEPRGRRSHSPLGFFSPSVPSRSPLPEREPERTDDRSRVESSARAGDQ 216
+ H + P PE RG + P VP R P+ R+ R SA G
Sbjct: 174 SQHPERS---PEPEGRGNHARKPAAL---PVPGRFPIRPVLGGRSGPGDRSLRSAHLGGA 227
Query: 217 RRGREPTSR 225
+GR T+R
Sbjct: 228 GQGRPWTAR 236
Score = 30.0 bits (66), Expect = 4.0
Identities = 60/243 (24%), Positives = 72/243 (29%), Gaps = 69/243 (28%)
Query: 154 SARAPHTAGAG--------PGPGPEPRGRRSHSPLGFFSPSVPSRSPLPEREPERTDDRS 205
SA AP AG G P G + R H P G P R P P + S
Sbjct: 86 SAEAPAPAGPGTTRRAGHMPASG-QVEARNDHRPPGRAPPRHAPRFPRPRMRFPQAWKAS 144
Query: 206 RVESSARAGDQRRGREPTSRDHRAATRRAAHGPFRRRERRKPRPRSESSQLACHLDLCFK 265
R + QR P +R + GP RR + P E H
Sbjct: 145 RAKEPRGLPAQRPTWGPGTR---------SRGPPRRARSQHPERSPEPEGRGNH------ 189
Query: 266 WLPVASSRRPVAEAEPG----RPEFGSASTRGCEEGRRVPRGTGSTCLRTDGGSLCSEKT 321
+R+P A PG RP G S G G LR+
Sbjct: 190 ------ARKPAALPVPGRFPIRPVLGGRS------------GPGDRSLRS---------- 221
Query: 322 QTPEGGCETERPVSVRLALFICLLPRRLQPLIPAHPVRKQTAASPTATRRGRLPRAGQAG 381
GG RP + R P IP R + A S T R PR A
Sbjct: 222 -AHLGGAGQGRPWTAR------------PPPIPHTRPRPKCACSTPGTNRNLGPRVAGAN 268
Query: 382 QAA 384
+A
Sbjct: 269 HSA 271
>gi|209862765 RUN and SH3 domain containing 2 [Homo sapiens]
Length = 1516
Score = 44.7 bits (104), Expect = 2e-04
Identities = 56/222 (25%), Positives = 81/222 (36%), Gaps = 26/222 (11%)
Query: 165 PGPGPEPRGRRSHSPLGFFSPSVPSRSPLPEREPERTDDRSRVESSARAGDQRRGREPTS 224
PGPGP+P PS PS L ++ + +++ V SS +A PT
Sbjct: 431 PGPGPDP------------GPSQPSEYYLFQKPEVQPEEQEAVSSSTQAA---AAVGPTV 475
Query: 225 RDHRAATRRAAHGPFRRRERRKPRPRSESSQLACHLDLCFKWL--PVASSRRPVAEAEPG 282
+ + T + R+R + RS L + L PV S P A A PG
Sbjct: 476 LEGQVYTNTSPPNLSTGRQRSRSYDRSLQRSPPVRLGSLERMLSCPVRLSEGPAAMAGPG 535
Query: 283 RPEFGSASTRGCEEGRRVPRGTGSTCLRTDGGSLCSEKTQTPEGGCETERPVSVRLALFI 342
P S +GR+ G+GS LR G E + E + P+
Sbjct: 536 SPPRRVTSFAELAKGRKKTGGSGSPPLRVSVGDSSQEFSPIQEAQQDRGAPLDEGTCCSH 595
Query: 343 CLLPRRLQPLI------PAHPVRKQTAASPTATRRGRLPRAG 378
L P L P + P+ P Q P ++ +P AG
Sbjct: 596 SLPPMPLGPGMDLLGPDPSPPWSTQVCQGPHSS---EMPPAG 634
Score = 32.3 bits (72), Expect = 0.81
Identities = 22/86 (25%), Positives = 32/86 (37%), Gaps = 1/86 (1%)
Query: 87 SRAAPTPRSAAEAPPGSAIPAHLPRSVQRVLGARRTEPRSAGERRRALPAAAGRKTKTWQ 146
SR P P+ + + P A+P+ P VQ + T P + + GR W
Sbjct: 1426 SRREPEPKESLQEPHSPALPSSPPCEVQALCHHLATGPGQLSFHKGDILRVLGRAGGDWL 1485
Query: 147 SQNQSPRSARAPHT-AGAGPGPGPEP 171
++ P S P P P P P
Sbjct: 1486 RCSRGPDSGLVPLAYVTLTPTPSPTP 1511
Score = 30.8 bits (68), Expect = 2.4
Identities = 38/163 (23%), Positives = 59/163 (36%), Gaps = 20/163 (12%)
Query: 23 QRQATHRDTPHLVTLGFCGTPGQKHFPKKPPLQSLPARRRATPRRRARVRVTPPVGRGGL 82
+++A T +G GQ + PP S R+R+ R+ R +PPV G L
Sbjct: 457 EQEAVSSSTQAAAAVGPTVLEGQVYTNTSPPNLST-GRQRSRSYDRSLQR-SPPVRLGSL 514
Query: 83 LSSWSRAAPTPRSAAEAPPGSAIPAHLPRSVQRVLGARRTEPRSAGERRRALPAAAGRKT 142
R P +E P A P PR V + ++ G L + G +
Sbjct: 515 ----ERMLSCPVRLSEGPAAMAGPGSPPRRVTSFAELAKGRKKTGGSGSPPLRVSVGDSS 570
Query: 143 KTWQSQNQSPRSARAPHTAGA-----------GPGP---GPEP 171
+ + ++ + AP G GPG GP+P
Sbjct: 571 QEFSPIQEAQQDRGAPLDEGTCCSHSLPPMPLGPGMDLLGPDP 613
>gi|55741719 RUN and SH3 domain containing 2 [Homo sapiens]
Length = 1516
Score = 44.7 bits (104), Expect = 2e-04
Identities = 56/222 (25%), Positives = 81/222 (36%), Gaps = 26/222 (11%)
Query: 165 PGPGPEPRGRRSHSPLGFFSPSVPSRSPLPEREPERTDDRSRVESSARAGDQRRGREPTS 224
PGPGP+P PS PS L ++ + +++ V SS +A PT
Sbjct: 431 PGPGPDP------------GPSQPSEYYLFQKPEVQPEEQEAVSSSTQAA---AAVGPTV 475
Query: 225 RDHRAATRRAAHGPFRRRERRKPRPRSESSQLACHLDLCFKWL--PVASSRRPVAEAEPG 282
+ + T + R+R + RS L + L PV S P A A PG
Sbjct: 476 LEGQVYTNTSPPNLSTGRQRSRSYDRSLQRSPPVRLGSLERMLSCPVRLSEGPAAMAGPG 535
Query: 283 RPEFGSASTRGCEEGRRVPRGTGSTCLRTDGGSLCSEKTQTPEGGCETERPVSVRLALFI 342
P S +GR+ G+GS LR G E + E + P+
Sbjct: 536 SPPRRVTSFAELAKGRKKTGGSGSPPLRVSVGDSSQEFSPIQEAQQDRGAPLDEGTCCSH 595
Query: 343 CLLPRRLQPLI------PAHPVRKQTAASPTATRRGRLPRAG 378
L P L P + P+ P Q P ++ +P AG
Sbjct: 596 SLPPMPLGPGMDLLGPDPSPPWSTQVCQGPHSS---EMPPAG 634
Score = 32.3 bits (72), Expect = 0.81
Identities = 22/86 (25%), Positives = 32/86 (37%), Gaps = 1/86 (1%)
Query: 87 SRAAPTPRSAAEAPPGSAIPAHLPRSVQRVLGARRTEPRSAGERRRALPAAAGRKTKTWQ 146
SR P P+ + + P A+P+ P VQ + T P + + GR W
Sbjct: 1426 SRREPEPKESLQEPHSPALPSSPPCEVQALCHHLATGPGQLSFHKGDILRVLGRAGGDWL 1485
Query: 147 SQNQSPRSARAPHT-AGAGPGPGPEP 171
++ P S P P P P P
Sbjct: 1486 RCSRGPDSGLVPLAYVTLTPTPSPTP 1511
Score = 30.8 bits (68), Expect = 2.4
Identities = 38/163 (23%), Positives = 59/163 (36%), Gaps = 20/163 (12%)
Query: 23 QRQATHRDTPHLVTLGFCGTPGQKHFPKKPPLQSLPARRRATPRRRARVRVTPPVGRGGL 82
+++A T +G GQ + PP S R+R+ R+ R +PPV G L
Sbjct: 457 EQEAVSSSTQAAAAVGPTVLEGQVYTNTSPPNLST-GRQRSRSYDRSLQR-SPPVRLGSL 514
Query: 83 LSSWSRAAPTPRSAAEAPPGSAIPAHLPRSVQRVLGARRTEPRSAGERRRALPAAAGRKT 142
R P +E P A P PR V + ++ G L + G +
Sbjct: 515 ----ERMLSCPVRLSEGPAAMAGPGSPPRRVTSFAELAKGRKKTGGSGSPPLRVSVGDSS 570
Query: 143 KTWQSQNQSPRSARAPHTAGA-----------GPGP---GPEP 171
+ + ++ + AP G GPG GP+P
Sbjct: 571 QEFSPIQEAQQDRGAPLDEGTCCSHSLPPMPLGPGMDLLGPDP 613
>gi|169214061 PREDICTED: hypothetical protein [Homo sapiens]
Length = 384
Score = 44.3 bits (103), Expect = 2e-04
Identities = 74/255 (29%), Positives = 92/255 (36%), Gaps = 51/255 (20%)
Query: 48 FPKKPPLQSLP------ARRRATPRRRARVRVTPPVGRGGLLSSWSRAAPTPR------- 94
+P+K P LP + R T RR + P + RG S +AA R
Sbjct: 61 WPQKHPYHLLPELPTQISSSRPTRPRRCKSSSRPHLARGR--RSPLKAAQQDRGLPAWGV 118
Query: 95 ---SAAEAPPGSAIPAHLPRSVQRVLGARRTEPRSAGE-------RRRALPAAAGRKTKT 144
S AE P SA+ S +R LG + R A E R+R P +
Sbjct: 119 WLLSRAEVRPRSALG-----SSRRGLGDKGPRSRRAAEFTQARPTRKRRTPGGGRPEAGC 173
Query: 145 WQSQNQSPRSARAPHTAGAGPG-PGPEPRGRRS-HSPLGFFSPSVPSRSP---------L 193
W + R AGAGP P P G SP +P P + P L
Sbjct: 174 WLENRRQRRRKAGAERAGAGPTLTPPLPAGSPDPPSPAATAAPQ-PEQRPHLSRGQWRLL 232
Query: 194 PEREPERTDDRSRVESSARAGDQRRGREPTSRDHRAATRR--AAHGPF--RRRERRK--- 246
P R PER + SS RA + A R A GPF RR RR+
Sbjct: 233 PRRRPERAAGSAGSCSSRRALPASGSGAAMTGSWAAPPRPAWAGLGPFWHLRRSRRQDGL 292
Query: 247 --PRPRSESSQLACH 259
P PR SS +A H
Sbjct: 293 CCPGPRPPSSTVASH 307
>gi|169214437 PREDICTED: hypothetical protein [Homo sapiens]
Length = 384
Score = 44.3 bits (103), Expect = 2e-04
Identities = 74/255 (29%), Positives = 92/255 (36%), Gaps = 51/255 (20%)
Query: 48 FPKKPPLQSLP------ARRRATPRRRARVRVTPPVGRGGLLSSWSRAAPTPR------- 94
+P+K P LP + R T RR + P + RG S +AA R
Sbjct: 61 WPQKHPYHLLPELPTQISSSRPTRPRRCKSSSRPHLARGR--RSPLKAAQQDRGLPAWGV 118
Query: 95 ---SAAEAPPGSAIPAHLPRSVQRVLGARRTEPRSAGE-------RRRALPAAAGRKTKT 144
S AE P SA+ S +R LG + R A E R+R P +
Sbjct: 119 WLLSRAEVRPRSALG-----SSRRGLGDKGPRSRRAAEFTQARPTRKRRTPGGGRPEAGC 173
Query: 145 WQSQNQSPRSARAPHTAGAGPG-PGPEPRGRRS-HSPLGFFSPSVPSRSP---------L 193
W + R AGAGP P P G SP +P P + P L
Sbjct: 174 WLENRRQRRRKAGAERAGAGPTLTPPLPAGSPDPPSPAATAAPQ-PEQRPHLSRGQWRLL 232
Query: 194 PEREPERTDDRSRVESSARAGDQRRGREPTSRDHRAATRR--AAHGPF--RRRERRK--- 246
P R PER + SS RA + A R A GPF RR RR+
Sbjct: 233 PRRRPERAAGSAGSCSSRRALPASGSGAAMTGSWAAPPRPAWAGLGPFWHLRRSRRQDGL 292
Query: 247 --PRPRSESSQLACH 259
P PR SS +A H
Sbjct: 293 CCPGPRPPSSTVASH 307
>gi|169213353 PREDICTED: hypothetical protein [Homo sapiens]
Length = 384
Score = 44.3 bits (103), Expect = 2e-04
Identities = 74/255 (29%), Positives = 92/255 (36%), Gaps = 51/255 (20%)
Query: 48 FPKKPPLQSLP------ARRRATPRRRARVRVTPPVGRGGLLSSWSRAAPTPR------- 94
+P+K P LP + R T RR + P + RG S +AA R
Sbjct: 61 WPQKHPYHLLPELPTQISSSRPTRPRRCKSSSRPHLARGR--RSPLKAAQQDRGLPAWGV 118
Query: 95 ---SAAEAPPGSAIPAHLPRSVQRVLGARRTEPRSAGE-------RRRALPAAAGRKTKT 144
S AE P SA+ S +R LG + R A E R+R P +
Sbjct: 119 WLLSRAEVRPRSALG-----SSRRGLGDKGPRSRRAAEFTQARPTRKRRTPGGGRPEAGC 173
Query: 145 WQSQNQSPRSARAPHTAGAGPG-PGPEPRGRRS-HSPLGFFSPSVPSRSP---------L 193
W + R AGAGP P P G SP +P P + P L
Sbjct: 174 WLENRRQRRRKAGAERAGAGPTLTPPLPAGSPDPPSPAATAAPQ-PEQRPHLSRGQWRLL 232
Query: 194 PEREPERTDDRSRVESSARAGDQRRGREPTSRDHRAATRR--AAHGPF--RRRERRK--- 246
P R PER + SS RA + A R A GPF RR RR+
Sbjct: 233 PRRRPERAAGSAGSCSSRRALPASGSGAAMTGSWAAPPRPAWAGLGPFWHLRRSRRQDGL 292
Query: 247 --PRPRSESSQLACH 259
P PR SS +A H
Sbjct: 293 CCPGPRPPSSTVASH 307
>gi|239742598 PREDICTED: hypothetical protein [Homo sapiens]
Length = 296
Score = 44.3 bits (103), Expect = 2e-04
Identities = 62/214 (28%), Positives = 75/214 (35%), Gaps = 43/214 (20%)
Query: 91 PTPRSAAEAPPGSAIPAHLPRSVQRVLGARRTEP-RSAGERRRALPAAAGRKTKTWQSQN 149
P P+ +A P + R +R EP R GERRRA P TK W+
Sbjct: 90 PKPKQSARTPS-----IQVGRGRGEGAASRSCEPARGGGERRRAFP-----HTKWWR--R 137
Query: 150 QSPRSARAPHTAGAGPGPGPEPRGRRSHSPLGFFSPSVPSRSPLPEREPERTDDRSRVES 209
R HT P P R + SP G P++ P P+ P R R S
Sbjct: 138 GGGRRTWGRHT----PYGIPADRRQLDASP-GSRRPALVCARPSPQGPPTAGGPRRRSVS 192
Query: 210 SARAGDQRRGREPTSRDH---------RAATRRAAHGPFRRRERRKPRPRSESSQLACHL 260
+ RG SR H R RRA R RERR+ R S +L
Sbjct: 193 AGLVLAGARGPARPSRPHPAVRAGERERTHLRRAPGAAGRARERRRSRANEWSRRL---- 248
Query: 261 DLCFKWLPVASSRRPVAEAEPGRPEFGSASTRGC 294
+A RPV PGR G GC
Sbjct: 249 --------LAGDLRPV----PGRTARGCQGECGC 270
>gi|188536004 zinc finger protein 469 [Homo sapiens]
Length = 3925
Score = 43.9 bits (102), Expect = 3e-04
Identities = 85/340 (25%), Positives = 118/340 (34%), Gaps = 55/340 (16%)
Query: 13 KDEKNTSSGLQRQATHRDTPHLVTLGFCGTPGQKHFPKKPPL------QSLPARRRATP- 65
+ E S G + P +L G GQ K+ PL ++ AR R P
Sbjct: 3549 RPENEASPGSPGPLLQQALPLGASLPRPGARGQDAEGKRAPLVFSGKRRAPGARGRCAPD 3608
Query: 66 --------RRRARVRVTPPVGRGGLLSSWSRAAPTP----------RSAAEAPPGSA-IP 106
++ V + V GG ++ + + T RSAA P + P
Sbjct: 3609 HFQEDHLLQKEKEVSSSHMVSEGGPRGTFHKGSATKPAGCQSSSKDRSAASTPSKALKFP 3668
Query: 107 AHLPRSVQRVLGARRTEPRSAGERRRALPAAAGRKTKTWQSQNQSPRSARAPHTAGAGPG 166
H PR + +G+ + G PA K + SPR G G
Sbjct: 3669 VH-PR---KAVGSLAPGELARGTENGMKPATPKAKPGPSSQGSGSPRPGTK---TGGGSQ 3721
Query: 167 PGPEPRGRRSHSPLGFFSPSVPSRSPLPEREPERTDDRSRVESSARAGDQ---------R 217
P P +S + PS PSRSP PER P R +S + AG+Q
Sbjct: 3722 PQPASGQLQSETATTPAKPSFPSRSPAPERLPARAQAKSCTKGPREAGEQGPHGSLGPKE 3781
Query: 218 RGREPTSRDH---RAATRRAAHGPFRRRERRKPR-PRSESSQLACHLDLCFKWLPVASS- 272
+G T R R + G F R + PR+ Q L K P + +
Sbjct: 3782 KGESSTKRKKGQVPGPARSESVGSFGRAPSAPDKPPRTPRKQATPSRVLPTKPKPNSQNK 3841
Query: 273 -RRPVAE---AEPG----RPEFGSASTRGCEEGRRVPRGT 304
R P +E AEPG + G A +G R RGT
Sbjct: 3842 PRPPPSEQRKAEPGHTQRKDRLGKAFPQGRPLLRPPKRGT 3881
Score = 33.5 bits (75), Expect = 0.37
Identities = 46/161 (28%), Positives = 60/161 (37%), Gaps = 36/161 (22%)
Query: 87 SRAAPTPRSAAEAPPGSAIP-AHLPRSVQRVLGAR-RTEPRSAGERRRALPAAA------ 138
S+A TP S A P +A P PR R AR R + RS G A +
Sbjct: 887 SKAGVTPESKAPPPLPAATPDPQTPRPGDRGCPARGRPKTRSLGLAPTEADAPSQGRQQR 946
Query: 139 -GRKTKTWQSQNQSPRSARAPHTAGAGPG--------------PGPEPRGRRSHSPLGFF 183
G++ K ++ S +A + G G P P PR R+ +P
Sbjct: 947 RGKQLKLFRKDLDSGGAAEGSGSGGGGRASGLRPRRNDGLGERPPPRPRRPRTQAPGSRA 1006
Query: 184 SPS--VPSRSPLPE--------REPERTDDRSRVESSARAG 214
P+ VP + LPE R P R D R R AR G
Sbjct: 1007 DPAPRVPRAAALPEETRSSRRRRLPPRKDPRKR---KARGG 1044
Score = 30.4 bits (67), Expect = 3.1
Identities = 44/190 (23%), Positives = 62/190 (32%), Gaps = 43/190 (22%)
Query: 49 PKKPPLQSLPARRRATPRRRARVRVTP--PVGRGGL---------------LSSWSRAAP 91
P+ P +LP R++ RRR R P RGG L + A+
Sbjct: 1010 PRVPRAAALPEETRSSRRRRLPPRKDPRKRKARGGAWGKELILKIVQQKNRLREYDFASE 1069
Query: 92 TPRSAAEAPPGSAIPAHLPR-----SVQRVLGARRTEPRSAGERRRALPAAAGRKTKTWQ 146
+ P G R V+ G R EP+ R+ A A G
Sbjct: 1070 SEEDEQPPPRGPGFRGRRGRGEKRKEVELTQGPREDEPQK--PRKAARQEAGG------- 1120
Query: 147 SQNQSPRSARAPHTAGAGPGPGPEPRG----------RRSHSPLGFFSPSVPSRSPLPER 196
+ +P + P + GPG P+ RG R P PSV + PL
Sbjct: 1121 --DGAPANPEEPGGSRPGPGRSPQARGPSRSLETGAAAREGGPKCADRPSVAPKDPLQVP 1178
Query: 197 EPERTDDRSR 206
T + +R
Sbjct: 1179 TNTETSEETR 1188
>gi|78042577 MAP7 domain containing 1 [Homo sapiens]
Length = 841
Score = 43.9 bits (102), Expect = 3e-04
Identities = 57/232 (24%), Positives = 85/232 (36%), Gaps = 37/232 (15%)
Query: 55 QSLPARRRATPRRRARVRVTPP--VGRGGLLSSWSRAAPTPRSAAEAP-PGSAIPAHLPR 111
QSLPA RA ++P +SW R P S +P PG +P P
Sbjct: 441 QSLPASPRARLSASTASELSPKSKARPSSPSTSWHR----PASPCPSPGPGHTLPPK-PP 495
Query: 112 SVQRVLGARRTEPRSAGERRRALPAAAGRKTKTWQSQNQS-PRSARAPHTAGAGPGPGPE 170
S + + + R E + + P+AAG + K+ + S + + AP + P P P
Sbjct: 496 SPRGTTASPKGRVRRKEEAKES-PSAAGPEDKSQSKRRASNEKESAAPASPAPSPAPSPT 554
Query: 171 PRGRRSHSPLG--------FFSPSVPSRSPLPEREPERTDDRSR-----VESSARAGDQR 217
P + P SP P+ P + T DR E +A +QR
Sbjct: 555 PAPPQKEQPPAETPTDAAVLTSPPAPAPPVTPSKPMAGTTDREEATRLLAEKRRQAREQR 614
Query: 218 RGRE-----PTSRDHR---------AATRRAAHGPFRRRERRKPRPRSESSQ 255
E RD R A R RRRE ++ R ++++ Q
Sbjct: 615 EREEQERRLQAERDKRMREEQLAREAEARAEREAEARRREEQEAREKAQAEQ 666
>gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 855
Score = 43.5 bits (101), Expect = 4e-04
Identities = 82/345 (23%), Positives = 114/345 (33%), Gaps = 49/345 (14%)
Query: 64 TPRRRARVRVTPPVGRGGLLSSWSRAAPTPRSAAEAPPG---SAIPAHLPRSVQRVLGAR 120
TPR R PPV L + A + AE G + IP PR+
Sbjct: 26 TPRPPGSPRPPPPVTPAALRVLGAAGAVGRKPLAERAGGIGGATIPESAPRA-------- 77
Query: 121 RTEPRSAGERRR---ALPAAAGRKTKTWQSQNQSPRSARAPHTAGAGPGPGP-------- 169
RSAG R + P A+GR + ++N SP +P A PGP
Sbjct: 78 -GPTRSAGTSSRNPASRPPASGRGERAPPAKNTSPGPVSSPGRASGTTRPGPLGQKGLRI 136
Query: 170 -----EPRGRRSHSPLGFFSPSVPSR---SPLPEREPERTDDRSRVESS----ARAGDQR 217
RG+ + +P + R P P RSR + R
Sbjct: 137 SAEETVARGKATEAPKRSALSAGARRDTSGPTPGTPSPAMARRSRAAGTEVGLPRPAPSA 196
Query: 218 RGREPTSRDHRAATRRAAHGPFRRRERRKPRPRSESS-QLACHLDLCFKWLPVASSRRPV 276
R R PT ++ + + H + RP + Q L P++S R
Sbjct: 197 RPRPPTEGPRKSVSSASEHSTTEPSPAARRRPSAGGGLQRPASRSLSSSATPLSSPARSG 256
Query: 277 AEAEPGRPEFGSASTRGCEEGRRVPRGTGSTCLRTDG----GSLCSEKTQTPEGGCETER 332
A G P + ++ +G + R T R D G L S TP +
Sbjct: 257 PSAR-GTPRAPAHPSQPKPKGLQALRPPQVTPPRKDAAPALGPLSSSPLATPSPSAALQS 315
Query: 333 ------PVSVRLALFICLL--PRRLQPLIPAHPVRKQTAASPTAT 369
P + + C L P L P P+ P QT SP AT
Sbjct: 316 QAPPTLPATPHSSSLTCQLATPLPLAPPSPSAPPSLQTLPSPPAT 360
Score = 30.4 bits (67), Expect = 3.1
Identities = 43/162 (26%), Positives = 57/162 (35%), Gaps = 12/162 (7%)
Query: 49 PKKPPLQ---SLPARRRATPRRRARVRVTPPVGRGGLLSSWSRAAPTPRSAAEAPPGSAI 105
P PP+Q S PA +P + P + L S A P S + PP A
Sbjct: 443 PPSPPVQAPFSPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAP 502
Query: 106 PAHLPRSVQRVLGARRTEPRSAGERRRALPAAAGRKTKTWQSQNQSPRSARAPHTAGAGP 165
P +Q + P A +ALP+ ++ Q SA P + A P
Sbjct: 503 PPLAAPPLQLAKPPPQAPPALATPPLQALPSPPA----SFPGQAPFSPSASLPMSPLATP 558
Query: 166 GPGPEPRGRRSHSPLGFFSPSVPSRSPL--PEREPERTDDRS 205
P P +PL PS P+ L P R P D S
Sbjct: 559 PPQAPP---VLAAPLLQVPPSPPASPTLQAPRRPPTPGPDTS 597
Score = 28.9 bits (63), Expect = 9.0
Identities = 65/247 (26%), Positives = 80/247 (32%), Gaps = 49/247 (19%)
Query: 52 PPLQ---SLPARRRATPRRRARVRVTPPVGRGGLLSSWSRAAPTPRS--AAEAPPGSAIP 106
PPLQ S PA +P + PP+ L A P P++ A PP A+P
Sbjct: 477 PPLQVPPSPPASPPMSPSATPPPQAPPPLAAPPL----QLAKPPPQAPPALATPPLQALP 532
Query: 107 ---AHLPRSVQRVLGARRTEPRSAGERRRALPAAAGRKTKTWQSQNQSP--RSARAPHTA 161
A P A A +A P A + S SP ++ R P T
Sbjct: 533 SPPASFPGQAPFSPSASLPMSPLATPPPQAPPVLAAPLLQVPPSPPASPTLQAPRRPPT- 591
Query: 162 GAGPGPGPEPRGRRSHSPLGFFSPSVPSRSPLPEREPERTDDRSRVESSARAGDQRRGRE 221
PGP G R L P PSRSP SS +G G
Sbjct: 592 ---PGPDTSVSGPRLTLALAPGPPPPPSRSP----------------SSTLSGPDLAGHS 632
Query: 222 PTSRDHRAATRRAAHGPFRRRERRKPRPRSESSQLACHLDLCFKWLPVASSRRPVA---- 277
++ R GP P P +E + ACH P A SR P
Sbjct: 633 SSATSTPEELRGYDSGP-EGGAAASPPPDAELA--ACH--------PAAWSRGPAPPLAF 681
Query: 278 EAEPGRP 284
PG P
Sbjct: 682 RGAPGAP 688
>gi|17136078 VGF nerve growth factor inducible precursor [Homo
sapiens]
Length = 615
Score = 43.5 bits (101), Expect = 4e-04
Identities = 47/173 (27%), Positives = 65/173 (37%), Gaps = 24/173 (13%)
Query: 82 LLSSWSRAAPTPRSAAEAPP----------GSAIPAHLPRSVQRVLGARRTEPRSAGERR 131
LL + AAP R A+ PP G A+P S V GAR +EP+ GE
Sbjct: 15 LLINGLGAAPPGRPEAQPPPLSSEHKEPVAGDAVPGPKDGSAPEVRGARNSEPQDEGELF 74
Query: 132 RALPAAAGRKTKTWQSQNQSPRSARAPHTAGAGPGPGPEPRGR--------RSHSPLGFF 183
+ + A R A P +G+ GP E ++HS
Sbjct: 75 QGVDPRALAAVLL----QALDRPASPPAPSGSQQGPEEEAAEALLTETVRSQTHSLPAPE 130
Query: 184 SP--SVPSRSPLPEREPERTDDRSRVESSARAGDQRRGREPTSRDHRAATRRA 234
SP + P R PE PE +D +E+ A + R P+S + T A
Sbjct: 131 SPEPAAPPRPQTPENGPEASDPSEELEALASLLQELRDFSPSSAKRQQETAAA 183
Score = 30.8 bits (68), Expect = 2.4
Identities = 33/116 (28%), Positives = 43/116 (37%), Gaps = 17/116 (14%)
Query: 89 AAPTPRSAAEAPPGSAIPAHLPRSVQRVLGARRTEPRSAGERRRALPAAAGRKTKTWQSQ 148
A P P++ P S L + R P SA +R+ AAA +T+T
Sbjct: 136 APPRPQTPENGPEASDPSEELEALASLLQELRDFSPSSA--KRQQETAAAETETRTHTLT 193
Query: 149 NQSPRSARAPHTAGAGPGPGPEPRGRRSHSPLGFFSPSVPSRSPLPEREPERTDDR 204
+ S PGPE R S G F VP R+PLP P + R
Sbjct: 194 RVNLES------------PGPERVWRASW---GEFQARVPERAPLPPPAPSQFQAR 234
>gi|224548936 hypothetical protein LOC100170229 [Homo sapiens]
Length = 715
Score = 43.1 bits (100), Expect = 5e-04
Identities = 51/206 (24%), Positives = 78/206 (37%), Gaps = 39/206 (18%)
Query: 51 KPPLQSLPARRRATPRRRARVRVTPPVGRGGLLSSWSRAAPTPRSAAEAPPGSAIPAHLP 110
KPP SL + + ATP R + V P R ++S P+ + ++ P++ P
Sbjct: 27 KPPA-SLKSTKSATPNR-SLVPTKPATSRNSVMS------PSSSKSTKSTSTKRAPSNRP 78
Query: 111 RSVQRVLGARRTEPRSAGERRRALPAAAGRKTKTWQSQNQSPRSARAPHTAGAGPGPGPE 170
S RV RT R + + R + K ++ + R H+ G PG
Sbjct: 79 SSRSRVRSKARTPSRVSTDTRTS---------KASKASDVRCHQRRGTHSRGRTPGR--- 126
Query: 171 PRGRRSHSPLGFFSPSVPSRSPLPEREPERTDDRSRVES-SARAGDQRRGREPTSRDHRA 229
RG RS +R P R R+ + AR G R R PTS+ +
Sbjct: 127 -RGSRSS-----------------KRSPSRASTPGRIRTHGARPGMASRVRTPTSQQKGS 168
Query: 230 ATRRAAHGPFRRRERRKPRPRSESSQ 255
+ RER +PR+ S +
Sbjct: 169 RGKSYGRPRTSNRERSDSQPRNLSKK 194
Score = 39.3 bits (90), Expect = 0.007
Identities = 41/140 (29%), Positives = 56/140 (40%), Gaps = 18/140 (12%)
Query: 119 ARRTEPRSAGERRRALPAAAGRKTKTWQSQNQSPRSARAPHTAGAGPGPGPEPRGRRSHS 178
+R P A +R R+ + R SQ SP R H P + R RS S
Sbjct: 462 SRSRSPNKARDRSRSRSPSKERD----HSQLGSPSKER-DHRRSRSPSKERQCRQSRSSS 516
Query: 179 PLGFFSPSVPSRSPLPERE------PERTDDRSRVESSARAGDQRRGREPTSRDHRAATR 232
SRSP ER+ P + DRS+ S + + R+ R P+ + R
Sbjct: 517 KE---RDHRRSRSPSKERQRRQSRSPNKERDRSQSRSPSEEREHRQSRSPS----KERDR 569
Query: 233 RAAHGPFRRRERRKPRPRSE 252
R P + RERR+ R SE
Sbjct: 570 RRWRSPSKERERRQSRSSSE 589
Score = 38.9 bits (89), Expect = 0.009
Identities = 67/276 (24%), Positives = 103/276 (37%), Gaps = 37/276 (13%)
Query: 3 KKSIKFRKKNKDEKNTSSGLQRQATHRDTPHLVTLGFCGTPGQKHFPKKPPLQSLPARRR 62
+ S+ +K K+TS+ +R ++R + TP + + S + R
Sbjct: 53 RNSVMSPSSSKSTKSTST--KRAPSNRPSSRSRVRSKARTPSRVSTDTRTSKASKASDVR 110
Query: 63 ATPRRRARVRVTPPVGRGGLLS--SWSRAAPTPRSAAE-APPGSAIPAHLPRSVQRVLGA 119
RR R P RG S S SRA+ R A PG A P S Q+ G+
Sbjct: 111 CHQRRGTHSRGRTPGRRGSRSSKRSPSRASTPGRIRTHGARPGMASRVRTPTSQQK--GS 168
Query: 120 RRTEPRSAGERRRALPAAAGRKTKTWQSQNQSPRSARAPHTAGAGPG------------- 166
R +S G P + R+ Q +N S +S R P +G G
Sbjct: 169 RG---KSYGR-----PRTSNRERSDSQPRNLSKKSYRPPGGSGIGRSSELAVTPSTAKCQ 220
Query: 167 -PGPEPRGRRSHSPLGFFSPSVPSRS----PLPEREPERTDDRSRVES----SARAGDQR 217
P P +S +P S V S P E+ T+ SRV+S S R+ Q
Sbjct: 221 TPTGIPSKEKSDNPSPSSSRKVKSYGQMIIPSREKSYSPTEMSSRVKSYNQASTRSRPQS 280
Query: 218 RGREPTSRDHRAATRRAAHGPFRRRERRKPRPRSES 253
+ + R R+ +++ H R ++ R+ S
Sbjct: 281 HSQSRSPRRSRSGSQKRTHSRVRSHSWKRNHSRARS 316
Score = 38.1 bits (87), Expect = 0.015
Identities = 49/186 (26%), Positives = 75/186 (40%), Gaps = 36/186 (19%)
Query: 85 SWSRAAPTPRSAAEAPPGSAIPAHLPRSVQRVLGARRTEPRSAGERRRALPAAAGRKTKT 144
S SR+ RS ++ S + +H +R R+ R+ + + GR +++
Sbjct: 282 SQSRSPRRSRSGSQKRTHSRVRSH---------SWKRNHSRARSRTRKGILSQMGRHSQS 332
Query: 145 -----WQSQNQS--PRSARAPHTAGAGPGPGPEPRGRRSHSP----LGFFSP---SVPSR 190
+SQNQS PR R+ H P RS S G SP S S+
Sbjct: 333 RSHSKGKSQNQSRTPRRGRS-HNWSRNPSKERSHSHSRSSSKERDHRGSSSPRKESGRSQ 391
Query: 191 SPLPE--------REPERTDDRSRVESSARAGDQRRGREPTSRDHRAATRRAAHGPFRRR 242
S P R P + DRSR S +A D+ R R P ++A + P++ R
Sbjct: 392 SGSPNKQRDHSRSRSPNKARDRSRSRSPYKARDRSRSRSP----NKARDCSRSRSPYKAR 447
Query: 243 ERRKPR 248
+R + R
Sbjct: 448 DRSRSR 453
Score = 37.4 bits (85), Expect = 0.025
Identities = 40/159 (25%), Positives = 63/159 (39%), Gaps = 26/159 (16%)
Query: 119 ARRTEPRSAGERRRALPAAAGRKTKTWQSQNQSP--RSARAPHTAGAGPGPGPEPRGRRS 176
+R P A +R R+ R +S N++ +R+P+ A P R
Sbjct: 402 SRSRSPNKARDRSRSRSPYKARDRSRSRSPNKARDCSRSRSPYKA-RDRSRSRSPNKARD 460
Query: 177 HSPLGFFSPSVPSRSPLPEREPERTDDRSRVESSARAGDQRRGREPT------------- 223
HS SP+ +R R P + D S++ S ++ D RR R P+
Sbjct: 461 HSRSR--SPN-KARDRSRSRSPSKERDHSQLGSPSKERDHRRSRSPSKERQCRQSRSSSK 517
Query: 224 SRDHRAA-------TRRAAHGPFRRRERRKPRPRSESSQ 255
RDHR + RR + P + R+R + R SE +
Sbjct: 518 ERDHRRSRSPSKERQRRQSRSPNKERDRSQSRSPSEERE 556
Score = 37.0 bits (84), Expect = 0.033
Identities = 58/228 (25%), Positives = 90/228 (39%), Gaps = 39/228 (17%)
Query: 45 QKHFPKKPPLQSLPARRRATPRR-----------RARVRVTPPVGRGGLLSSWSRAAPTP 93
Q H + P +S ++ T R RAR R R G+LS R +
Sbjct: 279 QSHSQSRSPRRSRSGSQKRTHSRVRSHSWKRNHSRARSRT-----RKGILSQMGRHS--- 330
Query: 94 RSAAEAPPGSAIPAHLPRSVQRVLGARR-------TEPRSAGERRRALPAAAGRKTKTWQ 146
+S + + S + PR + +R + RS+ + R +++ RK ++ +
Sbjct: 331 QSRSHSKGKSQNQSRTPRRGRSHNWSRNPSKERSHSHSRSSSKERDHRGSSSPRK-ESGR 389
Query: 147 SQNQSPRSARAPHTAGAGPGPGPEPRGRRSHSPLGFFSPSVPSRSPLPEREPERTDDRSR 206
SQ+ SP R H+ P + RS SP +R R P + D SR
Sbjct: 390 SQSGSPNKQR-DHSRSRSPNKARDRS--RSRSPY-------KARDRSRSRSPNKARDCSR 439
Query: 207 VESSARAGDQRRGREPT-SRDH-RAATRRAAHGPFRRRERRKPRPRSE 252
S +A D+ R R P +RDH R+ + A R R K R S+
Sbjct: 440 SRSPYKARDRSRSRSPNKARDHSRSRSPNKARDRSRSRSPSKERDHSQ 487
Score = 32.0 bits (71), Expect = 1.1
Identities = 32/118 (27%), Positives = 48/118 (40%), Gaps = 13/118 (11%)
Query: 146 QSQNQSPRSARAPHTAGAGPGPGPEPRGRRSHSPLGFFSPSVPSRSPLPEREPERTDDRS 205
+ Q + RS+ P E + R+S SP S SRSP ERE ++
Sbjct: 506 ERQCRQSRSSSKERDHRRSRSPSKERQRRQSRSPNKERDRS-QSRSPSEEREHRQS---- 560
Query: 206 RVESSARAGDQRRGREPTSRDHRAATRRAAHGPFRRRERRK------PRPRSESSQLA 257
S ++ D+RR R P+ R +R ++ R R RPR+ S + A
Sbjct: 561 --RSPSKERDRRRWRSPSKERERRQSRSSSEERDHSRSRSPNKQSGYSRPRASSKEKA 616
Score = 30.8 bits (68), Expect = 2.4
Identities = 32/147 (21%), Positives = 50/147 (34%), Gaps = 19/147 (12%)
Query: 112 SVQRVLGARRTEPRSAGERRRALPAAAGRKTKTWQSQNQSPRSARAPHTAGAGPGPGPEP 171
S +R R+ + RR P+ + Q + RS P E
Sbjct: 504 SKERQCRQSRSSSKERDHRRSRSPSK--------ERQRRQSRSPNKERDRSQSRSPSEER 555
Query: 172 RGRRSHSPLGFFSPSVPSRSPLPEREPERTDDRSRVESSARAGDQRRGREPTSRD----H 227
R+S SP R R P + +R + SS+ D R R P +
Sbjct: 556 EHRQSRSPS-------KERDRRRWRSPSKERERRQSRSSSEERDHSRSRSPNKQSGYSRP 608
Query: 228 RAATRRAAHGPFRRRERRKPRPRSESS 254
RA+++ AH R + +S +S
Sbjct: 609 RASSKEKAHSRSRTPSKEGNHSQSRTS 635
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.131 0.405
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,801,048
Number of Sequences: 37866
Number of extensions: 1272807
Number of successful extensions: 9962
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 117
Number of HSP's successfully gapped in prelim test: 897
Number of HSP's that attempted gapping in prelim test: 7890
Number of HSP's gapped (non-prelim): 2527
length of query: 416
length of database: 18,247,518
effective HSP length: 105
effective length of query: 311
effective length of database: 14,271,588
effective search space: 4438463868
effective search space used: 4438463868
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.