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Search of human proteins with 239746772
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239746772 PREDICTED: similar to hCG1981372 [Homo sapiens]
(317 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239746772 PREDICTED: similar to hCG1981372 [Homo sapiens] 651 0.0
gi|239752259 PREDICTED: similar to hCG1981372 [Homo sapiens] 644 0.0
gi|239746769 PREDICTED: similar to Serine/threonine-protein kina... 609 e-175
gi|239757749 PREDICTED: hypothetical protein [Homo sapiens] 526 e-149
gi|153251840 zinc finger protein 839 [Homo sapiens] 145 6e-35
gi|4826948 protein kinase, X-linked [Homo sapiens] 75 1e-13
gi|19111150 angiomotin isoform 2 [Homo sapiens] 54 1e-07
gi|166064029 angiomotin isoform 1 [Homo sapiens] 54 1e-07
gi|239757729 PREDICTED: hypothetical protein [Homo sapiens] 51 2e-06
gi|239752222 PREDICTED: hypothetical protein [Homo sapiens] 51 2e-06
gi|239746743 PREDICTED: hypothetical protein [Homo sapiens] 51 2e-06
gi|150170670 piccolo isoform 2 [Homo sapiens] 49 4e-06
gi|150378539 piccolo isoform 1 [Homo sapiens] 49 4e-06
gi|239753883 PREDICTED: hypothetical protein [Homo sapiens] 47 2e-05
gi|239748442 PREDICTED: hypothetical protein XP_002346660 [Homo ... 47 2e-05
gi|239742378 PREDICTED: hypothetical protein XP_002342507 [Homo ... 47 2e-05
gi|18079216 CASK interacting protein 1 [Homo sapiens] 47 3e-05
gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens] 46 5e-05
gi|58218966 hypothetical protein LOC339201 [Homo sapiens] 46 5e-05
gi|153946391 N-methyl-D-aspartate receptor subunit 2D precursor ... 45 6e-05
gi|239753839 PREDICTED: hypothetical protein [Homo sapiens] 45 8e-05
gi|194097487 RAN binding protein 3 isoform RANBP3-a [Homo sapiens] 45 8e-05
gi|158854042 hypothetical protein LOC222183 [Homo sapiens] 45 8e-05
gi|239744552 PREDICTED: hypothetical protein [Homo sapiens] 45 1e-04
gi|210032509 hypothetical protein LOC100130302 [Homo sapiens] 45 1e-04
gi|169790903 cyclin-dependent kinase inhibitor 1C isoform b [Hom... 44 1e-04
gi|169790899 cyclin-dependent kinase inhibitor 1C isoform b [Hom... 44 1e-04
gi|4557441 cyclin-dependent kinase inhibitor 1C isoform a [Homo ... 44 1e-04
gi|110832843 TBP-associated factor 4 [Homo sapiens] 44 2e-04
gi|23065526 growth arrest-specific 2 like 1 isoform a [Homo sapi... 44 2e-04
>gi|239746772 PREDICTED: similar to hCG1981372 [Homo sapiens]
Length = 317
Score = 651 bits (1680), Expect = 0.0
Identities = 317/317 (100%), Positives = 317/317 (100%)
Query: 1 MGSYPWSAEPTDAEKRGGARAKATPPAPRPRPGGFRPPLQRARCYRAAGGRGRETGNAQG 60
MGSYPWSAEPTDAEKRGGARAKATPPAPRPRPGGFRPPLQRARCYRAAGGRGRETGNAQG
Sbjct: 1 MGSYPWSAEPTDAEKRGGARAKATPPAPRPRPGGFRPPLQRARCYRAAGGRGRETGNAQG 60
Query: 61 PRLALQARAAAPAFPAASRRSVPAPRGRRLLLPGAVAACAVSDGQPLSPPLRQPRPAARA 120
PRLALQARAAAPAFPAASRRSVPAPRGRRLLLPGAVAACAVSDGQPLSPPLRQPRPAARA
Sbjct: 61 PRLALQARAAAPAFPAASRRSVPAPRGRRLLLPGAVAACAVSDGQPLSPPLRQPRPAARA 120
Query: 121 PEGALASCGLRAGWAGWPPQAAWRAWGASVDAAAPPSEAASAEARLPERSGPARRPGPEC 180
PEGALASCGLRAGWAGWPPQAAWRAWGASVDAAAPPSEAASAEARLPERSGPARRPGPEC
Sbjct: 121 PEGALASCGLRAGWAGWPPQAAWRAWGASVDAAAPPSEAASAEARLPERSGPARRPGPEC 180
Query: 181 VPMKAPGLAQAAVAEETPDWAPELCPSPESRSPEPPANRLQDFDTLVTVGKQLEAICVKV 240
VPMKAPGLAQAAVAEETPDWAPELCPSPESRSPEPPANRLQDFDTLVTVGKQLEAICVKV
Sbjct: 181 VPMKAPGLAQAAVAEETPDWAPELCPSPESRSPEPPANRLQDFDTLVTVGKQLEAICVKV 240
Query: 241 TSGETKGQERPTSLLATVQPQSARQSQPPRGNSRLVGLHVTSPQLLRVQPLVRTEPQSCF 300
TSGETKGQERPTSLLATVQPQSARQSQPPRGNSRLVGLHVTSPQLLRVQPLVRTEPQSCF
Sbjct: 241 TSGETKGQERPTSLLATVQPQSARQSQPPRGNSRLVGLHVTSPQLLRVQPLVRTEPQSCF 300
Query: 301 LHQPPAQGFVQRPLPAL 317
LHQPPAQGFVQRPLPAL
Sbjct: 301 LHQPPAQGFVQRPLPAL 317
>gi|239752259 PREDICTED: similar to hCG1981372 [Homo sapiens]
Length = 317
Score = 644 bits (1661), Expect = 0.0
Identities = 314/317 (99%), Positives = 315/317 (99%)
Query: 1 MGSYPWSAEPTDAEKRGGARAKATPPAPRPRPGGFRPPLQRARCYRAAGGRGRETGNAQG 60
MGSYPWSAEPTDAEKRGGARAKATPPAPRPRPGGFRPPLQRARCYRAAGGRGRETGNAQG
Sbjct: 1 MGSYPWSAEPTDAEKRGGARAKATPPAPRPRPGGFRPPLQRARCYRAAGGRGRETGNAQG 60
Query: 61 PRLALQARAAAPAFPAASRRSVPAPRGRRLLLPGAVAACAVSDGQPLSPPLRQPRPAARA 120
PRLALQARAAAPAFPAASRRSVPAPRGRRLLLPGAVAACAVSDGQPLSPPLRQPRPAARA
Sbjct: 61 PRLALQARAAAPAFPAASRRSVPAPRGRRLLLPGAVAACAVSDGQPLSPPLRQPRPAARA 120
Query: 121 PEGALASCGLRAGWAGWPPQAAWRAWGASVDAAAPPSEAASAEARLPERSGPARRPGPEC 180
PEGALASCGLRAGWAGWPPQAAWRAWGASVDAAAPPSEAASAEARLPERSGPARRPGPEC
Sbjct: 121 PEGALASCGLRAGWAGWPPQAAWRAWGASVDAAAPPSEAASAEARLPERSGPARRPGPEC 180
Query: 181 VPMKAPGLAQAAVAEETPDWAPELCPSPESRSPEPPANRLQDFDTLVTVGKQLEAICVKV 240
VPMKAPGLAQAAVAEETPDWAPELCPS E+RSPEPPANRLQDFDTLVTVGKQLEAICVKV
Sbjct: 181 VPMKAPGLAQAAVAEETPDWAPELCPSSEARSPEPPANRLQDFDTLVTVGKQLEAICVKV 240
Query: 241 TSGETKGQERPTSLLATVQPQSARQSQPPRGNSRLVGLHVTSPQLLRVQPLVRTEPQSCF 300
TSGETKGQE PTSLLATVQPQSARQSQPPRGNSRLVGLHVTSPQLLRVQPLVRTEPQSCF
Sbjct: 241 TSGETKGQEWPTSLLATVQPQSARQSQPPRGNSRLVGLHVTSPQLLRVQPLVRTEPQSCF 300
Query: 301 LHQPPAQGFVQRPLPAL 317
LHQPPAQGFVQRPLPAL
Sbjct: 301 LHQPPAQGFVQRPLPAL 317
>gi|239746769 PREDICTED: similar to Serine/threonine-protein kinase
PRKX (Protein kinase PKX1) [Homo sapiens]
Length = 330
Score = 609 bits (1571), Expect = e-175
Identities = 298/301 (99%), Positives = 299/301 (99%)
Query: 17 GGARAKATPPAPRPRPGGFRPPLQRARCYRAAGGRGRETGNAQGPRLALQARAAAPAFPA 76
GGARAKATPPAPRPRPGGFRPPLQRARCYRAAGGRGRETGNAQGPRLALQARAAAPAFPA
Sbjct: 30 GGARAKATPPAPRPRPGGFRPPLQRARCYRAAGGRGRETGNAQGPRLALQARAAAPAFPA 89
Query: 77 ASRRSVPAPRGRRLLLPGAVAACAVSDGQPLSPPLRQPRPAARAPEGALASCGLRAGWAG 136
ASRRSVPAPRGRRLLLPGAVAACAVSDGQPLSPPLRQPRPAARAPEGALASCGLRAGWAG
Sbjct: 90 ASRRSVPAPRGRRLLLPGAVAACAVSDGQPLSPPLRQPRPAARAPEGALASCGLRAGWAG 149
Query: 137 WPPQAAWRAWGASVDAAAPPSEAASAEARLPERSGPARRPGPECVPMKAPGLAQAAVAEE 196
WPPQAAWRAWGASVDAAAPPSEAASAEARLPERSGPARRPGPECVPMKAPGLAQAAVAEE
Sbjct: 150 WPPQAAWRAWGASVDAAAPPSEAASAEARLPERSGPARRPGPECVPMKAPGLAQAAVAEE 209
Query: 197 TPDWAPELCPSPESRSPEPPANRLQDFDTLVTVGKQLEAICVKVTSGETKGQERPTSLLA 256
TPDWAPELCPS E+RSPEPPANRLQDFDTLVTVGKQLEAICVKVTSGETKGQE PTSLLA
Sbjct: 210 TPDWAPELCPSSEARSPEPPANRLQDFDTLVTVGKQLEAICVKVTSGETKGQEWPTSLLA 269
Query: 257 TVQPQSARQSQPPRGNSRLVGLHVTSPQLLRVQPLVRTEPQSCFLHQPPAQGFVQRPLPA 316
TVQPQSARQSQPPRGNSRLVGLHVTSPQLLRVQPLVRTEPQSCFLHQPPAQGFVQRPLPA
Sbjct: 270 TVQPQSARQSQPPRGNSRLVGLHVTSPQLLRVQPLVRTEPQSCFLHQPPAQGFVQRPLPA 329
Query: 317 L 317
L
Sbjct: 330 L 330
>gi|239757749 PREDICTED: hypothetical protein [Homo sapiens]
Length = 264
Score = 526 bits (1355), Expect = e-149
Identities = 255/258 (98%), Positives = 257/258 (99%)
Query: 1 MGSYPWSAEPTDAEKRGGARAKATPPAPRPRPGGFRPPLQRARCYRAAGGRGRETGNAQG 60
+GSYPWSAEPTDAEKRGGARAKATPPAPRPRPGGFRPPLQRARCYRAAGGRGRETGNAQG
Sbjct: 7 VGSYPWSAEPTDAEKRGGARAKATPPAPRPRPGGFRPPLQRARCYRAAGGRGRETGNAQG 66
Query: 61 PRLALQARAAAPAFPAASRRSVPAPRGRRLLLPGAVAACAVSDGQPLSPPLRQPRPAARA 120
PRLALQARAAAPAFPAASRRSVPAPRGRRLLLPGAVAACAVSDGQPLSPPLRQPRPAARA
Sbjct: 67 PRLALQARAAAPAFPAASRRSVPAPRGRRLLLPGAVAACAVSDGQPLSPPLRQPRPAARA 126
Query: 121 PEGALASCGLRAGWAGWPPQAAWRAWGASVDAAAPPSEAASAEARLPERSGPARRPGPEC 180
PEGALASCGLRAGWAGWPPQAAWRAWGASVDAAAPPSEAASAEARLPERSGPARRPGPEC
Sbjct: 127 PEGALASCGLRAGWAGWPPQAAWRAWGASVDAAAPPSEAASAEARLPERSGPARRPGPEC 186
Query: 181 VPMKAPGLAQAAVAEETPDWAPELCPSPESRSPEPPANRLQDFDTLVTVGKQLEAICVKV 240
VPMKAPGLAQAAVAEETPDWAPELCPS E+RSPEPPANRLQDFDTLVTVGKQLEAICVKV
Sbjct: 187 VPMKAPGLAQAAVAEETPDWAPELCPSSEARSPEPPANRLQDFDTLVTVGKQLEAICVKV 246
Query: 241 TSGETKGQERPTSLLATV 258
TSGETKGQERPTSLLATV
Sbjct: 247 TSGETKGQERPTSLLATV 264
>gi|153251840 zinc finger protein 839 [Homo sapiens]
Length = 927
Score = 145 bits (365), Expect = 6e-35
Identities = 74/90 (82%), Positives = 79/90 (87%), Gaps = 3/90 (3%)
Query: 231 KQLEAICVKVTSGETKGQERPTSLLATVQPQSARQSQPPRGNSRLVGLHVTSPQLLRVQP 290
+QLEAICVKVTSGETKGQERP L T+QPQ+AR+SQ PRGNS LVGLH+ SPQLLRVQP
Sbjct: 96 QQLEAICVKVTSGETKGQERPMLLPTTIQPQTARKSQLPRGNSCLVGLHIASPQLLRVQP 155
Query: 291 LVRTEPQSCFLH---QPPAQGFVQRPLPAL 317
LVRTEPQSCFL QPPAQGFVQRPLPAL
Sbjct: 156 LVRTEPQSCFLSDLCQPPAQGFVQRPLPAL 185
>gi|4826948 protein kinase, X-linked [Homo sapiens]
Length = 358
Score = 74.7 bits (182), Expect = 1e-13
Identities = 39/56 (69%), Positives = 41/56 (73%), Gaps = 8/56 (14%)
Query: 183 MKAPGLAQAA--------VAEETPDWAPELCPSPESRSPEPPANRLQDFDTLVTVG 230
M+APGLAQAA VAEETPD AP LCPSPE+ SPEPP LQDFDTL TVG
Sbjct: 1 MEAPGLAQAAAAESDSRKVAEETPDGAPALCPSPEALSPEPPVYSLQDFDTLATVG 56
>gi|19111150 angiomotin isoform 2 [Homo sapiens]
Length = 675
Score = 54.3 bits (129), Expect = 1e-07
Identities = 60/204 (29%), Positives = 81/204 (39%), Gaps = 18/204 (8%)
Query: 17 GGARAKATPPAPRPRPGGFRPPLQRARCYRAAGGRGRETGNAQGP---RLALQARAAAPA 73
G RA+ P P P P P + G R T +G + A A + PA
Sbjct: 421 GDYRAEYVPSTPSPVP----PSTPLLSAHSKTGSRDCSTQTERGTESNKTAAVAPISVPA 476
Query: 74 FPAASRRSVPAPRGRRLLLPGAVAACAVSDGQPLSPPLRQPRPAARAPEGALASCGLRAG 133
AA+ + + VAA V+ +P AA AP A A+ A
Sbjct: 477 PVAAAATAAAITATAATITTTMVAAAPVAVAAAAAPA------AAAAPSPATAAATAAAV 530
Query: 134 WAGWPPQAAWRAWGASVDAAAPPSEAASAEARLPERSGPARRPGPECVPMKAPGLAQAAV 193
Q A AS A AP + AA+A P + PA P P VP+ AP AQA+
Sbjct: 531 SPAAAGQIPAAASVASAAAVAPSAAAAAAVQVAP--AAPAPVPAPALVPVPAPAAAQASA 588
Query: 194 AEET--PDWAPELCPSPESRSPEP 215
+T P AP + P+P + +P P
Sbjct: 589 PAQTQAPTSAPAVAPTP-APTPTP 611
>gi|166064029 angiomotin isoform 1 [Homo sapiens]
Length = 1084
Score = 54.3 bits (129), Expect = 1e-07
Identities = 60/204 (29%), Positives = 81/204 (39%), Gaps = 18/204 (8%)
Query: 17 GGARAKATPPAPRPRPGGFRPPLQRARCYRAAGGRGRETGNAQGP---RLALQARAAAPA 73
G RA+ P P P P P + G R T +G + A A + PA
Sbjct: 830 GDYRAEYVPSTPSPVP----PSTPLLSAHSKTGSRDCSTQTERGTESNKTAAVAPISVPA 885
Query: 74 FPAASRRSVPAPRGRRLLLPGAVAACAVSDGQPLSPPLRQPRPAARAPEGALASCGLRAG 133
AA+ + + VAA V+ +P AA AP A A+ A
Sbjct: 886 PVAAAATAAAITATAATITTTMVAAAPVAVAAAAAPA------AAAAPSPATAAATAAAV 939
Query: 134 WAGWPPQAAWRAWGASVDAAAPPSEAASAEARLPERSGPARRPGPECVPMKAPGLAQAAV 193
Q A AS A AP + AA+A P + PA P P VP+ AP AQA+
Sbjct: 940 SPAAAGQIPAAASVASAAAVAPSAAAAAAVQVAP--AAPAPVPAPALVPVPAPAAAQASA 997
Query: 194 AEET--PDWAPELCPSPESRSPEP 215
+T P AP + P+P + +P P
Sbjct: 998 PAQTQAPTSAPAVAPTP-APTPTP 1020
>gi|239757729 PREDICTED: hypothetical protein [Homo sapiens]
Length = 329
Score = 50.8 bits (120), Expect = 2e-06
Identities = 77/290 (26%), Positives = 105/290 (36%), Gaps = 38/290 (13%)
Query: 4 YPWSAEPTDAEKRGGARAKATPPAPRPR-PGGFRPPLQRARCYRAAGGRGRETGNA-QGP 61
+P S +P + ++G + AP PR PG PP C G RGR T P
Sbjct: 39 WPRSFKPPLSPEKGTKASGPQTSAPSPRDPGLHTPP-----CSPRRGRRGRPTQEVCPAP 93
Query: 62 RLALQARAAAPAFPAASRRSVPAPRGRRLLLPGAVAACAVSDGQPLSPPLR---QPRPAA 118
Q P P ++ P P G R G+ A A+ PP QPR
Sbjct: 94 GPCAQPAGTCPPPPTGEKQ--PRPHGFRCS-HGSKRAPALLGAPARRPPAHIPAQPRWPR 150
Query: 119 RAPEGALASCGLRAGWAGWPPQAAWRAWGASVDAAAPPSEAAS----------AEARLPE 168
P + + G G P QAA + AA +A+ + L E
Sbjct: 151 LQPVAKRRARPVPPGLPGAPKQAALTPGRRPLTPAAFAPKASRDQQVTDSTTICQRGLIE 210
Query: 169 RSGPARRPGPECV------PMKAPGLAQAAVAEETPDWAPELCPSPESRSPE----PPAN 218
+GPAR+ C +A G + + +P L PSP S SP PPAN
Sbjct: 211 ETGPARQISDLCEVSQGVGAFRAGGCPSSLASSREQTHSPHLYPSPSSSSPSSWEAPPAN 270
Query: 219 RLQDFDTLVTVGKQL---EAICVKVT--SGETKGQERPTSLLATVQPQSA 263
+ +L A+C + T S +E P SLL + P A
Sbjct: 271 SVTPRGRPGIPAHKLGASSAVCQEATYKSLWLTERETPHSLLLCLSPSHA 320
>gi|239752222 PREDICTED: hypothetical protein [Homo sapiens]
Length = 329
Score = 50.8 bits (120), Expect = 2e-06
Identities = 77/290 (26%), Positives = 105/290 (36%), Gaps = 38/290 (13%)
Query: 4 YPWSAEPTDAEKRGGARAKATPPAPRPR-PGGFRPPLQRARCYRAAGGRGRETGNA-QGP 61
+P S +P + ++G + AP PR PG PP C G RGR T P
Sbjct: 39 WPRSFKPPLSPEKGTKASGPQTSAPSPRDPGLHTPP-----CSPRRGRRGRPTQEVCPAP 93
Query: 62 RLALQARAAAPAFPAASRRSVPAPRGRRLLLPGAVAACAVSDGQPLSPPLR---QPRPAA 118
Q P P ++ P P G R G+ A A+ PP QPR
Sbjct: 94 GPCAQPAGTCPPPPTGEKQ--PRPHGFRCS-HGSKRAPALLGAPARRPPAHIPAQPRWPR 150
Query: 119 RAPEGALASCGLRAGWAGWPPQAAWRAWGASVDAAAPPSEAAS----------AEARLPE 168
P + + G G P QAA + AA +A+ + L E
Sbjct: 151 LQPVAKRRARPVPPGLPGAPKQAALTPGRRPLTPAAFAPKASRDQQVTDSTTICQRGLIE 210
Query: 169 RSGPARRPGPECV------PMKAPGLAQAAVAEETPDWAPELCPSPESRSPE----PPAN 218
+GPAR+ C +A G + + +P L PSP S SP PPAN
Sbjct: 211 ETGPARQISDLCEVSQGVGAFRAGGCPSSLASSREQTHSPHLYPSPSSSSPSSWEAPPAN 270
Query: 219 RLQDFDTLVTVGKQL---EAICVKVT--SGETKGQERPTSLLATVQPQSA 263
+ +L A+C + T S +E P SLL + P A
Sbjct: 271 SVTPRGRPGIPAHKLGASSAVCQEATYKSLWLTERETPHSLLLCLSPSHA 320
>gi|239746743 PREDICTED: hypothetical protein [Homo sapiens]
Length = 329
Score = 50.8 bits (120), Expect = 2e-06
Identities = 77/290 (26%), Positives = 105/290 (36%), Gaps = 38/290 (13%)
Query: 4 YPWSAEPTDAEKRGGARAKATPPAPRPR-PGGFRPPLQRARCYRAAGGRGRETGNA-QGP 61
+P S +P + ++G + AP PR PG PP C G RGR T P
Sbjct: 39 WPRSFKPPLSPEKGTKASGPQTSAPSPRDPGLHTPP-----CSPRRGRRGRPTQEVCPAP 93
Query: 62 RLALQARAAAPAFPAASRRSVPAPRGRRLLLPGAVAACAVSDGQPLSPPLR---QPRPAA 118
Q P P ++ P P G R G+ A A+ PP QPR
Sbjct: 94 GPCAQPAGTCPPPPTGEKQ--PRPHGFRCS-HGSKRAPALLGAPARRPPAHIPAQPRWPR 150
Query: 119 RAPEGALASCGLRAGWAGWPPQAAWRAWGASVDAAAPPSEAAS----------AEARLPE 168
P + + G G P QAA + AA +A+ + L E
Sbjct: 151 LQPVAKRRARPVPPGLPGAPKQAALTPGRRPLTPAAFAPKASRDQQVTDSTTICQRGLIE 210
Query: 169 RSGPARRPGPECV------PMKAPGLAQAAVAEETPDWAPELCPSPESRSPE----PPAN 218
+GPAR+ C +A G + + +P L PSP S SP PPAN
Sbjct: 211 ETGPARQISDLCEVSQGVGAFRAGGCPSSLASSREQTHSPHLYPSPSSSSPSSWEAPPAN 270
Query: 219 RLQDFDTLVTVGKQL---EAICVKVT--SGETKGQERPTSLLATVQPQSA 263
+ +L A+C + T S +E P SLL + P A
Sbjct: 271 SVTPRGRPGIPAHKLGASSAVCQEATYKSLWLTERETPHSLLLCLSPSHA 320
>gi|150170670 piccolo isoform 2 [Homo sapiens]
Length = 4935
Score = 49.3 bits (116), Expect = 4e-06
Identities = 56/210 (26%), Positives = 83/210 (39%), Gaps = 55/210 (26%)
Query: 8 AEPTDAEK----RGGARAKATPPA----PRPRPGGFRPPLQRARCYRAAGGRGRETGNAQ 59
A+ T +EK + G +A A PP P +PG +PP Q+ G AQ
Sbjct: 373 AQQTGSEKPSSEQPGPKALAQPPGVGKTPAQQPGPAKPPTQQV---------GTPKPLAQ 423
Query: 60 GPRLALQARAAAPAFPAASRRSVPAPRGRRLLLPGAVAACAVSDGQ-------PLSPPLR 112
P L A+A P ++ V P PG + A G+ P PP +
Sbjct: 424 QPGLQSPAKAPGP-----TKTPVQQPG------PGKIPAQQAGPGKTSAQQTGPTKPPSQ 472
Query: 113 QPRPAARAPEGALASCGLRAGWAGWPPQAAWRAWGASVDAAAPPSEAASAEARLPERSGP 172
P PA P+ + G A PPQ +A PPS+ + P++ GP
Sbjct: 473 LPGPAKPPPQ--------QPGPAKPPPQQP--------GSAKPPSQQPGSTKPPPQQPGP 516
Query: 173 AR----RPGPECVPMKAPGLAQAAVAEETP 198
A+ +PG P + PG A+ + + +P
Sbjct: 517 AKPSPQQPGSTKPPSQQPGSAKPSAQQPSP 546
Score = 44.3 bits (103), Expect = 1e-04
Identities = 48/196 (24%), Positives = 71/196 (36%), Gaps = 19/196 (9%)
Query: 25 PPAPRPRPGGFRPPLQRARCYRAAGGRGRETGNAQG---PRLALQARAAAPAFPAASRRS 81
PP +P PG +PP Q+ ++ G + G P P P + +
Sbjct: 304 PPIQQPTPG--KPPAQQPGHEKSQPGPAKPPAQPSGLTKPLAQQPGTVKPPVQPPGTTKP 361
Query: 82 VPAPRGRRLLLPGAVAACAVSDGQPLSPPLRQPRPAARA-PEGALASCGLRAGWAGWPPQ 140
P G P A +P S QP P A A P G + + G A P Q
Sbjct: 362 PAQPLG-----PAKPPAQQTGSEKPSS---EQPGPKALAQPPGVGKTPAQQPGPAKPPTQ 413
Query: 141 AAWRAWGASVDAAAPPSEAASAEARLPERSGPARRPGPECVPMKAPGLAQAAVAEETPDW 200
G A P + A+A P ++ P ++PGP +P + G + + + P
Sbjct: 414 QV----GTPKPLAQQPGLQSPAKAPGPTKT-PVQQPGPGKIPAQQAGPGKTSAQQTGPTK 468
Query: 201 APELCPSPESRSPEPP 216
P P P P+ P
Sbjct: 469 PPSQLPGPAKPPPQQP 484
Score = 39.7 bits (91), Expect = 0.004
Identities = 53/216 (24%), Positives = 77/216 (35%), Gaps = 15/216 (6%)
Query: 13 AEKRGGARAKATPPAPRPRPGGFRPPLQRARCYRAAGGRGRETGNAQGPRLALQARAAAP 72
A++ G +++ P P +P G PL A+ + G + P L A P
Sbjct: 316 AQQPGHEKSQPGPAKPPAQPSGLTKPL--AQQPGTVKPPVQPPGTTKPPAQPL-GPAKPP 372
Query: 73 AFPAASRR-SVPAPRGRRLLLPGAVAACAVSDGQPLSPPLRQ---PRPAARAPEGALASC 128
A S + S P + L P V P PP +Q P+P A+ P L S
Sbjct: 373 AQQTGSEKPSSEQPGPKALAQPPGVGKTPAQQPGPAKPPTQQVGTPKPLAQQP--GLQSP 430
Query: 129 GLRAGWAGWPPQAAWRAWGASVDAAAPPSEAASAEARLP--ERSGPAR----RPGPECVP 182
G P Q + A + A P + GPA+ +PGP P
Sbjct: 431 AKAPGPTKTPVQQPGPGKIPAQQAGPGKTSAQQTGPTKPPSQLPGPAKPPPQQPGPAKPP 490
Query: 183 MKAPGLAQAAVAEETPDWAPELCPSPESRSPEPPAN 218
+ PG A+ + P P P SP+ P +
Sbjct: 491 PQQPGSAKPPSQQPGSTKPPPQQPGPAKPSPQQPGS 526
Score = 30.4 bits (67), Expect = 2.2
Identities = 35/160 (21%), Positives = 54/160 (33%), Gaps = 2/160 (1%)
Query: 104 GQPLSPPLRQPRPAARAPEGALASCGLRAGWAGWPPQAAWRAWGASVDAAAPPSEAASAE 163
GQ + P + P+P ++ +L + P G A AS
Sbjct: 886 GQTVPTPQQSPKPQEQSRRFSLNLGSITDAPKSQPTTPQETVTGKLFGFGASIFSQASNL 945
Query: 164 ARLPERSGPARRPGPECVPMKAPGLAQAAVAEETPDWAPELCPSPESRSPEPPANRLQDF 223
+ GP + GP +AP +Q ++ P + P+P P +
Sbjct: 946 ISTAGQPGPHSQSGPGAPMKQAPAPSQPPTSQGPPKSTGQAPPAPAKSIPVKKETKAPAA 1005
Query: 224 DTLVTVGKQLEAICVKVTSGETKGQERPTSLLATVQPQSA 263
+ L +Q A VK T E K S T +PQ A
Sbjct: 1006 EKLEPKAEQ--APTVKRTETEKKPPPIKDSKSLTAEPQKA 1043
Score = 29.3 bits (64), Expect = 4.8
Identities = 16/42 (38%), Positives = 22/42 (52%)
Query: 241 TSGETKGQERPTSLLATVQPQSARQSQPPRGNSRLVGLHVTS 282
TSGET GQE+P S L + P + PR R L +++
Sbjct: 2362 TSGETFGQEKPASQLPSGSPSVSSLPAKPRPFFRSSSLDISA 2403
>gi|150378539 piccolo isoform 1 [Homo sapiens]
Length = 5142
Score = 49.3 bits (116), Expect = 4e-06
Identities = 56/210 (26%), Positives = 83/210 (39%), Gaps = 55/210 (26%)
Query: 8 AEPTDAEK----RGGARAKATPPA----PRPRPGGFRPPLQRARCYRAAGGRGRETGNAQ 59
A+ T +EK + G +A A PP P +PG +PP Q+ G AQ
Sbjct: 373 AQQTGSEKPSSEQPGPKALAQPPGVGKTPAQQPGPAKPPTQQV---------GTPKPLAQ 423
Query: 60 GPRLALQARAAAPAFPAASRRSVPAPRGRRLLLPGAVAACAVSDGQ-------PLSPPLR 112
P L A+A P ++ V P PG + A G+ P PP +
Sbjct: 424 QPGLQSPAKAPGP-----TKTPVQQPG------PGKIPAQQAGPGKTSAQQTGPTKPPSQ 472
Query: 113 QPRPAARAPEGALASCGLRAGWAGWPPQAAWRAWGASVDAAAPPSEAASAEARLPERSGP 172
P PA P+ + G A PPQ +A PPS+ + P++ GP
Sbjct: 473 LPGPAKPPPQ--------QPGPAKPPPQQP--------GSAKPPSQQPGSTKPPPQQPGP 516
Query: 173 AR----RPGPECVPMKAPGLAQAAVAEETP 198
A+ +PG P + PG A+ + + +P
Sbjct: 517 AKPSPQQPGSTKPPSQQPGSAKPSAQQPSP 546
Score = 44.3 bits (103), Expect = 1e-04
Identities = 48/196 (24%), Positives = 71/196 (36%), Gaps = 19/196 (9%)
Query: 25 PPAPRPRPGGFRPPLQRARCYRAAGGRGRETGNAQG---PRLALQARAAAPAFPAASRRS 81
PP +P PG +PP Q+ ++ G + G P P P + +
Sbjct: 304 PPIQQPTPG--KPPAQQPGHEKSQPGPAKPPAQPSGLTKPLAQQPGTVKPPVQPPGTTKP 361
Query: 82 VPAPRGRRLLLPGAVAACAVSDGQPLSPPLRQPRPAARA-PEGALASCGLRAGWAGWPPQ 140
P G P A +P S QP P A A P G + + G A P Q
Sbjct: 362 PAQPLG-----PAKPPAQQTGSEKPSS---EQPGPKALAQPPGVGKTPAQQPGPAKPPTQ 413
Query: 141 AAWRAWGASVDAAAPPSEAASAEARLPERSGPARRPGPECVPMKAPGLAQAAVAEETPDW 200
G A P + A+A P ++ P ++PGP +P + G + + + P
Sbjct: 414 QV----GTPKPLAQQPGLQSPAKAPGPTKT-PVQQPGPGKIPAQQAGPGKTSAQQTGPTK 468
Query: 201 APELCPSPESRSPEPP 216
P P P P+ P
Sbjct: 469 PPSQLPGPAKPPPQQP 484
Score = 39.7 bits (91), Expect = 0.004
Identities = 53/216 (24%), Positives = 77/216 (35%), Gaps = 15/216 (6%)
Query: 13 AEKRGGARAKATPPAPRPRPGGFRPPLQRARCYRAAGGRGRETGNAQGPRLALQARAAAP 72
A++ G +++ P P +P G PL A+ + G + P L A P
Sbjct: 316 AQQPGHEKSQPGPAKPPAQPSGLTKPL--AQQPGTVKPPVQPPGTTKPPAQPL-GPAKPP 372
Query: 73 AFPAASRR-SVPAPRGRRLLLPGAVAACAVSDGQPLSPPLRQ---PRPAARAPEGALASC 128
A S + S P + L P V P PP +Q P+P A+ P L S
Sbjct: 373 AQQTGSEKPSSEQPGPKALAQPPGVGKTPAQQPGPAKPPTQQVGTPKPLAQQP--GLQSP 430
Query: 129 GLRAGWAGWPPQAAWRAWGASVDAAAPPSEAASAEARLP--ERSGPAR----RPGPECVP 182
G P Q + A + A P + GPA+ +PGP P
Sbjct: 431 AKAPGPTKTPVQQPGPGKIPAQQAGPGKTSAQQTGPTKPPSQLPGPAKPPPQQPGPAKPP 490
Query: 183 MKAPGLAQAAVAEETPDWAPELCPSPESRSPEPPAN 218
+ PG A+ + P P P SP+ P +
Sbjct: 491 PQQPGSAKPPSQQPGSTKPPPQQPGPAKPSPQQPGS 526
Score = 30.4 bits (67), Expect = 2.2
Identities = 35/160 (21%), Positives = 54/160 (33%), Gaps = 2/160 (1%)
Query: 104 GQPLSPPLRQPRPAARAPEGALASCGLRAGWAGWPPQAAWRAWGASVDAAAPPSEAASAE 163
GQ + P + P+P ++ +L + P G A AS
Sbjct: 886 GQTVPTPQQSPKPQEQSRRFSLNLGSITDAPKSQPTTPQETVTGKLFGFGASIFSQASNL 945
Query: 164 ARLPERSGPARRPGPECVPMKAPGLAQAAVAEETPDWAPELCPSPESRSPEPPANRLQDF 223
+ GP + GP +AP +Q ++ P + P+P P +
Sbjct: 946 ISTAGQPGPHSQSGPGAPMKQAPAPSQPPTSQGPPKSTGQAPPAPAKSIPVKKETKAPAA 1005
Query: 224 DTLVTVGKQLEAICVKVTSGETKGQERPTSLLATVQPQSA 263
+ L +Q A VK T E K S T +PQ A
Sbjct: 1006 EKLEPKAEQ--APTVKRTETEKKPPPIKDSKSLTAEPQKA 1043
Score = 29.3 bits (64), Expect = 4.8
Identities = 16/42 (38%), Positives = 22/42 (52%)
Query: 241 TSGETKGQERPTSLLATVQPQSARQSQPPRGNSRLVGLHVTS 282
TSGET GQE+P S L + P + PR R L +++
Sbjct: 2362 TSGETFGQEKPASQLPSGSPSVSSLPAKPRPFFRSSSLDISA 2403
>gi|239753883 PREDICTED: hypothetical protein [Homo sapiens]
Length = 296
Score = 47.0 bits (110), Expect = 2e-05
Identities = 56/169 (33%), Positives = 66/169 (39%), Gaps = 13/169 (7%)
Query: 44 CYRAAG-GRGRETGNAQGPR---LALQARAAAPAFPAASRRSVPAPRGRRLLLPGAVAAC 99
CY G RGR+ G+ PR Q A + A AA+ R A R RR LL A
Sbjct: 64 CYAVPGVRRGRQAGDLSPPRPGSARTQLVATSAAQAAAAGR---AQRVRRGLLRWRTTAL 120
Query: 100 AVSDGQPLSPPLRQPRPAARAPEGALASCGLRAGWAGWPPQAAWRAWGASVDAAAPPSEA 159
P P LR+PR L + G RA G + R AS+D A +
Sbjct: 121 G-----PARPRLRRPRHRLPGGSRRLPAPGPRAPAPGKGRERELRTGAASIDRAPARTGP 175
Query: 160 ASAEARLPERSGPARRPGPECVPMKAPGLAQAAVAEETPDWAPELCPSP 208
AR R RPG VP PG AA +ET A E SP
Sbjct: 176 EDLAARASTRRPRGFRPGLP-VPTAPPGGLAAAAKDETSCAARERGASP 223
>gi|239748442 PREDICTED: hypothetical protein XP_002346660 [Homo
sapiens]
Length = 296
Score = 47.0 bits (110), Expect = 2e-05
Identities = 56/169 (33%), Positives = 66/169 (39%), Gaps = 13/169 (7%)
Query: 44 CYRAAG-GRGRETGNAQGPR---LALQARAAAPAFPAASRRSVPAPRGRRLLLPGAVAAC 99
CY G RGR+ G+ PR Q A + A AA+ R A R RR LL A
Sbjct: 64 CYAVPGVRRGRQAGDLSPPRPGSARTQLVATSAAQAAAAGR---AQRVRRGLLRWRTTAL 120
Query: 100 AVSDGQPLSPPLRQPRPAARAPEGALASCGLRAGWAGWPPQAAWRAWGASVDAAAPPSEA 159
P P LR+PR L + G RA G + R AS+D A +
Sbjct: 121 G-----PARPRLRRPRHRLPGGSRRLPAPGPRAPAPGKGRERELRTGAASIDRAPARTGP 175
Query: 160 ASAEARLPERSGPARRPGPECVPMKAPGLAQAAVAEETPDWAPELCPSP 208
AR R RPG VP PG AA +ET A E SP
Sbjct: 176 EDLAARASTRRPRGFRPGLP-VPTAPPGGLAAAAKDETSCAARERGASP 223
>gi|239742378 PREDICTED: hypothetical protein XP_002342507 [Homo
sapiens]
Length = 296
Score = 47.0 bits (110), Expect = 2e-05
Identities = 56/169 (33%), Positives = 66/169 (39%), Gaps = 13/169 (7%)
Query: 44 CYRAAG-GRGRETGNAQGPR---LALQARAAAPAFPAASRRSVPAPRGRRLLLPGAVAAC 99
CY G RGR+ G+ PR Q A + A AA+ R A R RR LL A
Sbjct: 64 CYAVPGVRRGRQAGDLSPPRPGSARTQLVATSAAQAAAAGR---AQRVRRGLLRWRTTAL 120
Query: 100 AVSDGQPLSPPLRQPRPAARAPEGALASCGLRAGWAGWPPQAAWRAWGASVDAAAPPSEA 159
P P LR+PR L + G RA G + R AS+D A +
Sbjct: 121 G-----PARPRLRRPRHRLPGGSRRLPAPGPRAPAPGKGRERELRTGAASIDRAPARTGP 175
Query: 160 ASAEARLPERSGPARRPGPECVPMKAPGLAQAAVAEETPDWAPELCPSP 208
AR R RPG VP PG AA +ET A E SP
Sbjct: 176 EDLAARASTRRPRGFRPGLP-VPTAPPGGLAAAAKDETSCAARERGASP 223
>gi|18079216 CASK interacting protein 1 [Homo sapiens]
Length = 1431
Score = 46.6 bits (109), Expect = 3e-05
Identities = 66/246 (26%), Positives = 90/246 (36%), Gaps = 30/246 (12%)
Query: 11 TDAEKRGGARAKATPPA-PRPRPGGFRPPLQRARCYRAAGGRGRETGNAQGPRLALQARA 69
T +R A +A PP P P P PP A G A+ P +
Sbjct: 1174 TGTVRRRPASEQAGPPELPPPPPPAEPPPTDLAHLPPLPPPEGEARKPAKPP----VSPK 1229
Query: 70 AAPAFPAASRRSVPAPRGRRLLLPGAVAACAVSDGQPLSPPLRQ---PRPAARAPEGALA 126
P + P P +++ LPG + V PP+ P P A P A+A
Sbjct: 1230 PVLTQPVPKLQGSPTPTSKKVPLPGP-GSPEVKRAHGTPPPVSPKPPPPPTAPKPVKAVA 1288
Query: 127 SCGLRAGWAGWPPQAAWRAWGASVDAAAPPSEAASAEARLPE-RSGPARRPGPEC----V 181
GL +G AG P A A PP+ A P + PA+ P P V
Sbjct: 1289 --GLPSGSAGPSP--------APSPARQPPAALAKPPGTPPSLGASPAKPPSPGAPALHV 1338
Query: 182 PMKAPGLAQAAVAEETPDWAPELCPSPESRSPEPPANRLQDFDTLVTVGKQLEAICVKVT 241
P K P A AA A AP PE SP A + + +T + L+A+ K+
Sbjct: 1339 PAKPPRAAAAAAAAAAAPPAP-----PEGASPGDSARQKLE-ETSACLAAALQAVEEKIR 1392
Query: 242 SGETKG 247
+ +G
Sbjct: 1393 QEDAQG 1398
>gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens]
Length = 538
Score = 45.8 bits (107), Expect = 5e-05
Identities = 52/167 (31%), Positives = 60/167 (35%), Gaps = 35/167 (20%)
Query: 53 RETGNAQGPRLALQARAAAPAFPAASRRSVPAPRGRRLLLPGAVAACAVSDGQPLSPPLR 112
R Q PR R A P P + R PA AA A P PP
Sbjct: 94 RNAARVQPPR-----RGATPPAPPRAPRGAPA-----------AAAAAAPPPTPAPPPPP 137
Query: 113 QPRPAA---RAPEGALASCGLRAGWAGWPPQAAWRAWGASVDAAAPPSEAASAEARLPER 169
P AA RAP A A+ A + P Q RA A+ AA PP+ AA P
Sbjct: 138 APVAAAAPARAPRAAAAAA--TAPPSPGPAQPGPRAQRAAPLAAPPPAPAAPPAVAPP-- 193
Query: 170 SGPARRPGPECVPMKAPGLAQAAVAEETPDWAPELCPSPESRSPEPP 216
+GP R P P A A E P P P+P + PP
Sbjct: 194 AGPRRAPPP------------AVAAREPPLPPPPQPPAPPQQQQPPP 228
Score = 43.5 bits (101), Expect = 2e-04
Identities = 45/118 (38%), Positives = 51/118 (43%), Gaps = 20/118 (16%)
Query: 107 LSPPLRQPRPAA--RAPEGALASCGLRAGWAGWPPQAAWRAWGASVDAAAPPS--EAASA 162
+ PP R P A RAP GA A+ A A PP A A V AAAP AA+A
Sbjct: 99 VQPPRRGATPPAPPRAPRGAPAA----AAAAAPPPTPAPPPPPAPVAAAAPARAPRAAAA 154
Query: 163 EARLPERSGPARRPGPEC---VPMKAPGLAQAAVAEETPDWAPELCPSPESRSPEPPA 217
A P GPA+ PGP P+ AP A AA P + P R PPA
Sbjct: 155 AATAPPSPGPAQ-PGPRAQRAAPLAAPPPAPAA--------PPAVAPPAGPRRAPPPA 203
Score = 42.7 bits (99), Expect = 4e-04
Identities = 44/138 (31%), Positives = 52/138 (37%), Gaps = 9/138 (6%)
Query: 10 PTDAEKRGGARAKATPPAPRPRPG------GFRPPLQRARCYRAAGGRGRETGNAQ-GPR 62
P A + A A A P P P P P + R AA G AQ GPR
Sbjct: 111 PPRAPRGAPAAAAAAAPPPTPAPPPPPAPVAAAAPARAPRAAAAAATAPPSPGPAQPGPR 170
Query: 63 LALQARAAAPAFPAASRRSVPAPRGRRLLLPGAVAACAVSDGQPLSPPL--RQPRPAARA 120
A AAP A+ +V P G R P AVAA P PP +Q +P
Sbjct: 171 AQRAAPLAAPPPAPAAPPAVAPPAGPRRAPPPAVAAREPPLPPPPQPPAPPQQQQPPPPQ 230
Query: 121 PEGALASCGLRAGWAGWP 138
P+ +RAG A P
Sbjct: 231 PQPPPEGGAVRAGGAARP 248
>gi|58218966 hypothetical protein LOC339201 [Homo sapiens]
Length = 193
Score = 45.8 bits (107), Expect = 5e-05
Identities = 48/152 (31%), Positives = 58/152 (38%), Gaps = 15/152 (9%)
Query: 60 GPRLALQARAAAPAFPAASRRSVPAPRGRRLLLPGAVAACAVSDGQPLSPPLRQPRPAAR 119
GP A Q AAP PA R+ + AP P A + A G P P R PR AA
Sbjct: 3 GPPSAPQGALAAPRSPAVRRKGLQAPSWGSPGRPAAHSPWAC--GPPHWGPQRGPRNAAA 60
Query: 120 APEG-----------ALASCGLRAGWAGWPPQAAWRAWGASVDAAAPPSEAA--SAEARL 166
A G A +C G PP A G + P + SA++R
Sbjct: 61 ARPGPRSRWHKRCAAACGACARPPGHQLQPPGAGAPQPGVACSYLGPRPQRTPCSAQSRP 120
Query: 167 PERSGPARRPGPECVPMKAPGLAQAAVAEETP 198
+GP RR P P APG A A +P
Sbjct: 121 GWCAGPRRRHAPGTEPHVAPGRAPPPRAGASP 152
Score = 34.7 bits (78), Expect = 0.11
Identities = 44/156 (28%), Positives = 52/156 (33%), Gaps = 35/156 (22%)
Query: 5 PWSAEPTD-AEKRGGARAKATPPAPRPRPGGFRPPLQRARCYRAAGGRGRETGN------ 57
PW+ P +RG A A P PR R RC A G R G+
Sbjct: 41 PWACGPPHWGPQRGPRNAAAARPGPRSR--------WHKRCAAACGACARPPGHQLQPPG 92
Query: 58 --AQGPRLALQARAAAPAFPAASRRSVPA----PRGRRLLLPGAVAACAVSDGQPLSPPL 111
A P +A P S +S P PR R PG +P P
Sbjct: 93 AGAPQPGVACSYLGPRPQRTPCSAQSRPGWCAGPRRRHA--PGT---------EPHVAPG 141
Query: 112 RQPRPAARAPEGALASCGLRAGWAGWPPQAAWRAWG 147
R P P A A G+ G + P A WR WG
Sbjct: 142 RAPPPRAGASPGSRLLPGSPSLLL---PAATWRTWG 174
>gi|153946391 N-methyl-D-aspartate receptor subunit 2D precursor [Homo
sapiens]
Length = 1336
Score = 45.4 bits (106), Expect = 6e-05
Identities = 74/255 (29%), Positives = 91/255 (35%), Gaps = 37/255 (14%)
Query: 26 PAPRPRPGGFRPPLQRARCYRAAGGRGRETGNAQGPRLALQARAAAPAFPAASRRSVPA- 84
PAPRP PG P RA+ R R T A P A R P
Sbjct: 921 PAPRPAPG----PAPFVPRERASVDRWRRTKGAGPP-------GGAGLADGFHRYYGPIE 969
Query: 85 PRGRRLLLPGAVAACAVSDGQPLSPPLRQP--RP------AARAPEGALASCGLRAGWAG 136
P+G L L A AA + G+PLSPP QP +P R E A G G+
Sbjct: 970 PQGLGLGLGEARAAPRGAAGRPLSPPAAQPPQKPPPSYFAIVRDKEPAEPPAGAFPGFPS 1029
Query: 137 --WPPQAAWRAWGASVDAAAPPSEAASAEARLPERSGPARRPGPECVPMKAPGLAQAAVA 194
PP AA A G + A E+ A AR P R PE P+ PG A
Sbjct: 1030 PPAPPAAAATAVGPPLCRLAFEDESPPAPARWP-------RSDPESQPLLGPGAGGAGGT 1082
Query: 195 EETPDWAPELCPSPESRSPEPPANRLQDFDTLVTVGKQLEAICVKVTSGETKGQERPTSL 254
AP P R+ PP L D + + + E++ G + G P
Sbjct: 1083 GGAGGGAP--AAPPPCRAAPPPCPYL-DLEPSPSDSEDSESL-----GGASLGGLEPWWF 1134
Query: 255 LATVQPQSARQSQPP 269
P + R PP
Sbjct: 1135 ADFPYPYAERLGPPP 1149
>gi|239753839 PREDICTED: hypothetical protein [Homo sapiens]
Length = 257
Score = 45.1 bits (105), Expect = 8e-05
Identities = 56/179 (31%), Positives = 68/179 (37%), Gaps = 36/179 (20%)
Query: 25 PPAPRPRPGGFR-----PPLQR-ARCYRAAGGRGRETGNAQGPRLALQARAAAPAFPAAS 78
PPA R G R PP + R AA R G A+G ++ A A +A
Sbjct: 86 PPARASRAAGRRAGPAGPPCRAPGRGRAAATRRSPAPGTARGSPAGVERAGGATAASSAG 145
Query: 79 RRSVPAPRGRRLLLPGAVAACAVSDGQPLSPPLRQPRPAA--RAPEGALASCGLRAGWAG 136
RSVPA R LP ++ G S LR+P AA R+P + WA
Sbjct: 146 TRSVPARR-----LPPPCGGTSLGAG---SRALRRPGSAALPRSPSSS-------RRWAA 190
Query: 137 WPPQAAWR-----AWGASVDAAAPPSEAASAEARLPERSG-PA-------RRPGPECVP 182
P A R W AAPP+ AAS P +G PA P P C P
Sbjct: 191 MPGPGAPRPGAPGTWPVGFAVAAPPAAAASVAPPPPAVAGAPAAAFRGWVAAPDPGCTP 249
Score = 32.3 bits (72), Expect = 0.57
Identities = 46/160 (28%), Positives = 64/160 (40%), Gaps = 27/160 (16%)
Query: 108 SPPLRQPRPAARAPEGALASCGLRAGWAGWPPQAAWRAWGASVDAAAPPSEAASAEARLP 167
SPP P +A + E A G +P ++A AWG PP+ A+ A R
Sbjct: 53 SPPTVAPAASAGSQEHPGAG-----GPLCFPARSA--AWG-------PPARASRAAGR-- 96
Query: 168 ERSGPARRPGPECVPMKAPGLAQAAVAEETPDWAPELC-PSPESRSPEPPANRLQDFDTL 226
R+GPA GP P +APG +AA +P AP SP A T
Sbjct: 97 -RAGPA---GP---PCRAPGRGRAAATRRSP--APGTARGSPAGVERAGGATAASSAGTR 147
Query: 227 VTVGKQLEAICVKVTSGE-TKGQERPTSLLATVQPQSARQ 265
++L C + G ++ RP S P S+R+
Sbjct: 148 SVPARRLPPPCGGTSLGAGSRALRRPGSAALPRSPSSSRR 187
>gi|194097487 RAN binding protein 3 isoform RANBP3-a [Homo sapiens]
Length = 562
Score = 45.1 bits (105), Expect = 8e-05
Identities = 63/208 (30%), Positives = 81/208 (38%), Gaps = 23/208 (11%)
Query: 4 YPWSAEPTDAEKRGGARAKATPPAPRPRPGGFRPPLQRARCYRAAGGRG--------RET 55
+P SA E A A A+ P P P P PP R R+AGG RE
Sbjct: 54 HPESAGEHALEPPAPAGASASTPPP-PAPEAQLPPFPRELAGRSAGGSSPEGGEDSDRED 112
Query: 56 GNAQGPRLALQARAAAPAFPAASRRSVPAPRGRRLLLPGAVAACAVSDGQPLSPPLRQPR 115
GN P + + ++ FP + +S G RL P + A S G P P Q R
Sbjct: 113 GN-YCPPVKRERTSSLTQFPPS--QSEERSSGFRLKPPTLIHGQAPSAGLPSQKPKEQQR 169
Query: 116 PAAR-----APE-GALASCGLRAGWAG--WPPQAAWRAWGASVDAAA--PPSEAASAEAR 165
R AP+ AL+ +G G P AS D AA PSEAA E +
Sbjct: 170 SVLRPAVLQAPQPKALSQTVPSSGTNGVSLPADCTGAVPAASPDTAAWRSPSEAAD-EEK 228
Query: 166 LPERSGPARRPGPECVPMKAPGLAQAAV 193
P+++ + E K P QA V
Sbjct: 229 EPQKNESSNASEEEACEKKDPATQQAFV 256
>gi|158854042 hypothetical protein LOC222183 [Homo sapiens]
Length = 653
Score = 45.1 bits (105), Expect = 8e-05
Identities = 56/206 (27%), Positives = 81/206 (39%), Gaps = 21/206 (10%)
Query: 8 AEPTDAEKRGGARAKATPPAP-RPRPGGFRPPLQRARCYRAAGGRGRETGNAQGPRLALQ 66
+ P+ + A A TPPA + P P + R RAAGG GR + R + +
Sbjct: 339 SSPSPRVRDKAAAAAPTPPARGKESPSPRSAPSSQGRGGRAAGGAGRRRRRRRRRRRS-R 397
Query: 67 ARAAAPAFPAASRRSVPAPRGRRLLLPGAVAACAVSDGQPLSPPLRQPRPAARAPEGALA 126
+ A+AP R PRG L A ++ G+ P P P + G
Sbjct: 398 SSASAPRRRGRRRPRPAPPRGSSRSLSRARSSSDSGSGRGAPGP--GPEPGSERGHG--- 452
Query: 127 SCGLRAGWAGWPPQAAWRAWGASVDAAAPPSEAASAEARLPERSGPARRPGP---ECVPM 183
G RA PP+A A+ PS A PE +R PGP
Sbjct: 453 GHGKRA--KERPPRAR--------PASTSPSPGAHGRRGGPEGKSSSRSPGPHPRSWSSS 502
Query: 184 KAPGLAQAAVAEETPDWAPELCPSPE 209
++P +++ AE+ P +P PSP+
Sbjct: 503 RSPSKSRSRSAEKRPH-SPSRSPSPK 527
>gi|239744552 PREDICTED: hypothetical protein [Homo sapiens]
Length = 221
Score = 44.7 bits (104), Expect = 1e-04
Identities = 54/181 (29%), Positives = 65/181 (35%), Gaps = 52/181 (28%)
Query: 6 WSAEPTDAEKRGGARAKATPPAPRPRPGGFRPPLQRARCYRAAGGRGRETGNAQGPRLAL 65
W E R G AT RP PG R +AR R G R R A+GPR A
Sbjct: 25 WGGEEVQGLARAGL---ATGKGQRP-PGPGRVRAAQARARRGGGARERPAEGARGPRAAR 80
Query: 66 QARAAAPAFPAASRRSVPAPRGRRLLLPGAVAACAVSDGQPLSPPLRQP----RPAARAP 121
AAP P++ APRG P P LR+P RP A+AP
Sbjct: 81 GGARAAP-MPSS------APRG------------------PTEPALRRPSSAERPLAQAP 115
Query: 122 EGALASCGLRAGWAGWPPQAAWRAWGASVDAAAPPSEAASAEARLPERSGPARRPGPECV 181
+ AS G G A A PS ++ A + R G RR +
Sbjct: 116 SSS-ASVGRAPG------------------AMASPSRSSEATGKPRGRDGRPRREEDDVP 156
Query: 182 P 182
P
Sbjct: 157 P 157
Score = 33.1 bits (74), Expect = 0.33
Identities = 37/126 (29%), Positives = 48/126 (38%), Gaps = 7/126 (5%)
Query: 129 GLRAGWAGWPPQAAWRAWGASVDAAAP--PSEAASAEARLPERSGPARRPGPEC-VPMKA 185
G++ GW G Q RA A+ P P +A+AR G RP P A
Sbjct: 20 GVQPGWGGEEVQGLARAGLATGKGQRPPGPGRVRAAQARARRGGGARERPAEGARGPRAA 79
Query: 186 PGLAQAAVAEETPDWAPELCPSPESRSPEPPANRL-QDFDTLVTVGKQLEAICVKVTSGE 244
G A+AA P AP P R P L Q + +VG+ A+ S E
Sbjct: 80 RGGARAA---PMPSSAPRGPTEPALRRPSSAERPLAQAPSSSASVGRAPGAMASPSRSSE 136
Query: 245 TKGQER 250
G+ R
Sbjct: 137 ATGKPR 142
>gi|210032509 hypothetical protein LOC100130302 [Homo sapiens]
Length = 887
Score = 44.7 bits (104), Expect = 1e-04
Identities = 87/301 (28%), Positives = 116/301 (38%), Gaps = 59/301 (19%)
Query: 47 AAGGRGRETGNAQGPRLALQAR-----AAAPAFPAASRRSVPAPRGRRLLL--PGAVAAC 99
AA A P LA A AAAPA AA+ + PAP + P A A+
Sbjct: 506 AAAAAAAAAAAAPAPALAAAAAPALAAAAAPALAAAAAPA-PAPAAAPAVAAAPAAAASA 564
Query: 100 AVSDGQPLSPPLRQ---PRPAARAPEGAL----------ASCGLRAGWAGWPPQAAWRAW 146
A S Q S PL Q P PAA+ P + S GL+A P Q A +A
Sbjct: 565 APSHSQKPSVPLIQASRPCPAAQPPTKFIKIAPAIQLRTGSTGLKAINVEGPVQGA-QAL 623
Query: 147 GASVDAAAPPSEAASAEARLPERSGPARRPGPECVPMKAPGLAQAAVAEETPDWAPELCP 206
G+S P A A A + SG + +P PG QA+ +P
Sbjct: 624 GSSFKPVQAPGSGAPAPAGI---SGSDLQSSGGPLPDARPGAVQAS----SPAPLQFFLN 676
Query: 207 SPESRSPEPPANRLQDFDTLVTVGKQLEAICVKVTSGETKGQERPTSLLATVQPQSARQS 266
+PE P TL+ V + V +G + + SL QP +A
Sbjct: 677 TPEGLRPL----------TLLQVPQG-----SAVLTGPQQQSHQLVSLQQLQQPTAAHPP 721
Query: 267 QP-PRGNS---RLVGLHVTSPQLLRVQPL-----VRTEPQSCFLH-----QPPAQGFVQR 312
QP P+G++ G + QLL+V P ++ +PQ L Q P QG VQ
Sbjct: 722 QPGPQGSALGLSTQGQAFPAQQLLKVNPTRARSGLQPQPQPAVLSLLGSAQVPQQG-VQL 780
Query: 313 P 313
P
Sbjct: 781 P 781
Score = 38.5 bits (88), Expect = 0.008
Identities = 40/135 (29%), Positives = 56/135 (41%), Gaps = 9/135 (6%)
Query: 83 PAPRGRRLLLPGAVAACAVSDGQPLSPPLRQPRPAARAPEGALASCGLRAGWAGWPPQAA 142
P PR + G +++ Q PL++P AA A A A+ A AA
Sbjct: 461 PPPRTQLPSSSGKISSGNSFPPQQAGSPLKRPFSAAAAIAAAAAAAAAAAA------AAA 514
Query: 143 WRAWGASVDAAAPPSEAASAEARLPERSGPARRPGPECVPMKAPGLAQAAVAEETPDWAP 202
A ++ AAA P+ AA+A L + PA P P P A A AA A + P
Sbjct: 515 AAAPAPALAAAAAPALAAAAAPALAAAAAPA--PAPAAAPAVAAAPAAAASAAPSHSQKP 572
Query: 203 ELCPSPESRSPEPPA 217
+ P ++ P P A
Sbjct: 573 SV-PLIQASRPCPAA 586
Score = 36.2 bits (82), Expect = 0.039
Identities = 31/114 (27%), Positives = 45/114 (39%), Gaps = 11/114 (9%)
Query: 112 RQPRPAARAPEGALASCGLRAGWAGWPPQAA-------WRAWGASVDAAAPPSEAASAEA 164
+ P P + P +S G + +PPQ A + A A AAA + AA+A A
Sbjct: 459 KHPPPRTQLP----SSSGKISSGNSFPPQQAGSPLKRPFSAAAAIAAAAAAAAAAAAAAA 514
Query: 165 RLPERSGPARRPGPECVPMKAPGLAQAAVAEETPDWAPELCPSPESRSPEPPAN 218
A P AP LA AA P AP + +P + + P++
Sbjct: 515 AAAPAPALAAAAAPALAAAAAPALAAAAAPAPAPAAAPAVAAAPAAAASAAPSH 568
>gi|169790903 cyclin-dependent kinase inhibitor 1C isoform b [Homo
sapiens]
Length = 305
Score = 44.3 bits (103), Expect = 1e-04
Identities = 52/164 (31%), Positives = 63/164 (38%), Gaps = 4/164 (2%)
Query: 59 QGPRLALQARAAAPAFPAASRRSVPAPRGRRLLLPGAVAACAVSDGQPLSPPLRQPRPAA 118
+GP + + PA R +V R R LL P VA AV+ PL P
Sbjct: 61 RGPGRLQWTEVDSDSVPAFYRETVQVGRCRLLLAPRPVAV-AVAVSPPLEPAAESLDGLE 119
Query: 119 RAPEGALASCGLRAGWAGWPPQAAWRAWGASVDA-AAPPSEAASAEARLPERSGPARRPG 177
APE L S + A + PP A A A P A A A L PA P
Sbjct: 120 EAPE-QLPSVPVPAPASTPPPVPVLAPAPAPAPAPVAAPVAAPVAVAVLAPAPAPAPAPA 178
Query: 178 PECVPMKAPGLAQAAVAEETPDWAPELCPSPESRSPEPPANRLQ 221
P P+ AP A A P AP +P+ S E AN+ Q
Sbjct: 179 PAPAPVAAPAPAPAPAPAPAPAPAPAPDAAPQ-ESAEQGANQGQ 221
>gi|169790899 cyclin-dependent kinase inhibitor 1C isoform b [Homo
sapiens]
Length = 305
Score = 44.3 bits (103), Expect = 1e-04
Identities = 52/164 (31%), Positives = 63/164 (38%), Gaps = 4/164 (2%)
Query: 59 QGPRLALQARAAAPAFPAASRRSVPAPRGRRLLLPGAVAACAVSDGQPLSPPLRQPRPAA 118
+GP + + PA R +V R R LL P VA AV+ PL P
Sbjct: 61 RGPGRLQWTEVDSDSVPAFYRETVQVGRCRLLLAPRPVAV-AVAVSPPLEPAAESLDGLE 119
Query: 119 RAPEGALASCGLRAGWAGWPPQAAWRAWGASVDA-AAPPSEAASAEARLPERSGPARRPG 177
APE L S + A + PP A A A P A A A L PA P
Sbjct: 120 EAPE-QLPSVPVPAPASTPPPVPVLAPAPAPAPAPVAAPVAAPVAVAVLAPAPAPAPAPA 178
Query: 178 PECVPMKAPGLAQAAVAEETPDWAPELCPSPESRSPEPPANRLQ 221
P P+ AP A A P AP +P+ S E AN+ Q
Sbjct: 179 PAPAPVAAPAPAPAPAPAPAPAPAPAPDAAPQ-ESAEQGANQGQ 221
>gi|4557441 cyclin-dependent kinase inhibitor 1C isoform a [Homo
sapiens]
Length = 316
Score = 44.3 bits (103), Expect = 1e-04
Identities = 52/164 (31%), Positives = 63/164 (38%), Gaps = 4/164 (2%)
Query: 59 QGPRLALQARAAAPAFPAASRRSVPAPRGRRLLLPGAVAACAVSDGQPLSPPLRQPRPAA 118
+GP + + PA R +V R R LL P VA AV+ PL P
Sbjct: 72 RGPGRLQWTEVDSDSVPAFYRETVQVGRCRLLLAPRPVAV-AVAVSPPLEPAAESLDGLE 130
Query: 119 RAPEGALASCGLRAGWAGWPPQAAWRAWGASVDA-AAPPSEAASAEARLPERSGPARRPG 177
APE L S + A + PP A A A P A A A L PA P
Sbjct: 131 EAPE-QLPSVPVPAPASTPPPVPVLAPAPAPAPAPVAAPVAAPVAVAVLAPAPAPAPAPA 189
Query: 178 PECVPMKAPGLAQAAVAEETPDWAPELCPSPESRSPEPPANRLQ 221
P P+ AP A A P AP +P+ S E AN+ Q
Sbjct: 190 PAPAPVAAPAPAPAPAPAPAPAPAPAPDAAPQ-ESAEQGANQGQ 232
>gi|110832843 TBP-associated factor 4 [Homo sapiens]
Length = 1085
Score = 43.9 bits (102), Expect = 2e-04
Identities = 76/257 (29%), Positives = 91/257 (35%), Gaps = 61/257 (23%)
Query: 56 GNAQGPRLALQARAAAPAFPAASRRSVPAPRGRRLLLPGAVAACAVSDGQPLSPPLRQPR 115
G A P A + AAPA PAA + P P P A A A G P PP P
Sbjct: 245 GAAAPPAPAAPSPPAAPA-PAAPAAAPPPP-------PPAPATLARPPGHPAGPPTAAPA 296
Query: 116 ---PAARAPEGALASCGLRAGWAGWP--------PQAAWRAWGASVDAAAPPS--EAASA 162
PAA G+ + A AG P P AA A V A +P +AA
Sbjct: 297 VPPPAAAQNGGSAGAAPAPAPAAGGPAGVSGQPGPGAAAAAPAPGVKAESPKRVVQAAPP 356
Query: 163 EARLPERSGPARR--------------PGPECVPMKAPGL-------AQAAVAEE----- 196
A+ SGPA P P VP APG A AV +
Sbjct: 357 AAQTLAASGPASTAASMVIGPTMQGALPSPAAVPPPAPGTPTGLPKGAAGAVTQSLSRTP 416
Query: 197 ---TPDWAPELCPSP-ESRSPEPPAN--RLQDFDTLVTVGKQLEAICVKVTSGETKGQER 250
T L P+ R P+PP N +Q+F QL V V S +
Sbjct: 417 TATTSGIRATLTPTVLAPRLPQPPQNPTNIQNF--------QLPPGMVLVRSENGQLLMI 468
Query: 251 PTSLLATVQPQSARQSQ 267
P LA +Q Q+ Q Q
Sbjct: 469 PQQALAQMQAQAHAQPQ 485
Score = 43.1 bits (100), Expect = 3e-04
Identities = 52/172 (30%), Positives = 63/172 (36%), Gaps = 17/172 (9%)
Query: 47 AAGGRGRETGNAQGPRLALQARAAAPAFPAASRRSVPAPRGRRLLLPGAVAACAVSDGQP 106
AAG G + P A A AAPA A P P GR PG P
Sbjct: 54 AAGALGNHVVSGS-PAGAAGAGPAAPAEGAPGAAPEPPPAGRAR--PGGGGPQRPGPPSP 110
Query: 107 LSP--PLRQPRPAARA---PEGALASCGLRAGWAGWPPQAAWRAWGASVDAAAPPSEAAS 161
P P PAA+ PEG+ SC P AA A A P++ A
Sbjct: 111 RRPLVPAGPAPPAAKLRPPPEGSAGSCA--------PVPAAAAVAAGPEPAPAGPAKPAG 162
Query: 162 AEARLPERSGPARRPGPECVPMKAPGLAQAAVAEETPDWAPELCPSPESRSP 213
A L R+GP PGP P PG A +T + + L S + +P
Sbjct: 163 PAA-LAARAGPGPGPGPGPGPGPGPGKPAGPGAAQTLNGSAALLNSHHAAAP 213
Score = 42.7 bits (99), Expect = 4e-04
Identities = 64/234 (27%), Positives = 75/234 (32%), Gaps = 18/234 (7%)
Query: 1 MGSYPWSAEPTDAEKRGGAR--------AKATPPAPRPRPGGFRP----PLQRARCYRAA 48
+G++ S P A G A A PPA R RPGG P P R A
Sbjct: 58 LGNHVVSGSPAGAAGAGPAAPAEGAPGAAPEPPPAGRARPGGGGPQRPGPPSPRRPLVPA 117
Query: 49 GGRGRETGNAQGPRLALQARAAAPAFPAASRRSVPAPRG-RRLLLPGAVAACAVSDGQPL 107
G P + + A PA A + PAP G + P A+AA A P
Sbjct: 118 GPAPPAAKLRPPPEGSAGSCAPVPAAAAVAAGPEPAPAGPAKPAGPAALAARAGPGPGPG 177
Query: 108 SPPLRQPRPAARAPEGAL----ASCGLRAGWAGWPPQAAWRAWGASVDAAAPPSEAASAE 163
P P P A GA S L P + G + P A
Sbjct: 178 PGPGPGPGPGKPAGPGAAQTLNGSAALLNSHHAAAPAVSLVNNGPAALLPLPKPAAPGTV 237
Query: 164 ARLPERSGPARRPGPEC-VPMKAPGLAQAAVAEETPDWAPELCPSPESRSPEPP 216
+ P G A P P P AP A A A P AP P PP
Sbjct: 238 IQTPPFVGAAAPPAPAAPSPPAAPAPAAPAAAPPPPPPAPATLARPPGHPAGPP 291
Score = 35.0 bits (79), Expect = 0.088
Identities = 67/256 (26%), Positives = 79/256 (30%), Gaps = 56/256 (21%)
Query: 2 GSYPWSAEPTDAEKRGGARAKATP-----PAPRPRPGGFRPPLQRARCYRAAGGRGRETG 56
G P A P A+A P P P P PG +P AG +T
Sbjct: 149 GPEPAPAGPAKPAGPAALAARAGPGPGPGPGPGPGPGPGKP----------AGPGAAQTL 198
Query: 57 NAQGPRLALQARAAAPAFPAASRRSVPAPRGRRLLLPGAVAACAVSDGQPLSPPLRQPRP 116
N L AAAPA + L LP A V P P P
Sbjct: 199 NGSAALLNSH-HAAAPAVSLVNNGPAAL-----LPLPKPAAPGTVIQTPPFVGAAAPPAP 252
Query: 117 AARAPEGALASCGLRA----------------GWAGWPPQA-------AWRAWGASVDAA 153
AA +P A A A G PP A A G S AA
Sbjct: 253 AAPSPPAAPAPAAPAAAPPPPPPAPATLARPPGHPAGPPTAAPAVPPPAAAQNGGSAGAA 312
Query: 154 APPSEAASAEARLPERSGP-----ARRPG-----PECVPMKAPGLAQAAVAEETPDWAPE 203
P+ AA A + + GP A PG P+ V AP AQ A A
Sbjct: 313 PAPAPAAGGPAGVSGQPGPGAAAAAPAPGVKAESPKRVVQAAPPAAQTLAASGPASTAAS 372
Query: 204 LC--PSPESRSPEPPA 217
+ P+ + P P A
Sbjct: 373 MVIGPTMQGALPSPAA 388
>gi|23065526 growth arrest-specific 2 like 1 isoform a [Homo
sapiens]
Length = 681
Score = 43.9 bits (102), Expect = 2e-04
Identities = 71/263 (26%), Positives = 94/263 (35%), Gaps = 59/263 (22%)
Query: 5 PWSAEPTDAEKRGGARAKATP---------PAPRPRPGGFRPPLQRARCYRA-------- 47
P A P +R G+R + TP P PRP PP R+R Y
Sbjct: 302 PRPASPVPGSERRGSRPEMTPVSLRSTKEGPETPPRPRDQLPPHPRSRRYSGDSDSSASS 361
Query: 48 -----AGGRGRETGNAQGPRLALQARAAAPAFPAASRRSVPAPR--GRRLLLPGAVAACA 100
G R +TG GPR +R PA+ RR PA R R L G
Sbjct: 362 AQSGPLGTRSDDTGT--GPRRERPSRRLTTGTPASPRRP-PALRSQSRDRLDRGRPRGAP 418
Query: 101 VSDGQPLS--PPLRQPRPAARAPEGALASCGLRAGWAGWPPQAAWRAWGASVDAAAPPSE 158
G LS P R+ R +R + L R G W P+ + G+ P
Sbjct: 419 GGRGAQLSVPSPARRARSQSREEQAVLLVRRDRDGQHSWVPRGR-GSGGSGRSTPQTPRA 477
Query: 159 AASAEARLPERSGPARRPG--PECV---PMK------------------APGLAQAAVAE 195
+ A RL S P+ G P + P++ A A AVA
Sbjct: 478 RSPAAPRLSRVSSPSPELGTTPASIFRTPLQLDPQQEQQLFRRLEEEFLANARALEAVAS 537
Query: 196 ETPDWAPELCPSPE-SRSPEPPA 217
TP P+P+ +R+P+PPA
Sbjct: 538 VTPTG-----PAPDPARAPDPPA 555
Score = 37.0 bits (84), Expect = 0.023
Identities = 54/207 (26%), Positives = 70/207 (33%), Gaps = 43/207 (20%)
Query: 46 RAAGGRGRETGNAQGPRLALQARAAAPAFPAASRRSVPAPR------------------- 86
R +GG GR T Q PR A +PA P SR S P+P
Sbjct: 462 RGSGGSGRST--PQTPR------ARSPAAPRLSRVSSPSPELGTTPASIFRTPLQLDPQQ 513
Query: 87 ----GRRL---LLPGAVAACAVSDGQPLSP---PLRQPRPAAR-----APEGALASCGLR 131
RRL L A A AV+ P P P R P P A + + +S +
Sbjct: 514 EQQLFRRLEEEFLANARALEAVASVTPTGPAPDPARAPDPPAPDSAYCSSSSSSSSLSVL 573
Query: 132 AGWAGWPPQAAWRAWGASVDAAAPPSEAASAEARLPERSGPARRPGPECVPMKAPGLAQA 191
G G P + A G + S ++ + P GP PG +
Sbjct: 574 GGKCGQPGDSGRTANGLPGPRSQALSSSSDEGSPCPGMGGPLDAPGSPLACTEPSRTWAR 633
Query: 192 AVAEETPDWAPELCPSPES-RSPEPPA 217
+ PD P P+P R P PA
Sbjct: 634 GRMDTQPDRKPSRIPTPRGPRRPSGPA 660
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.315 0.131 0.413
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,124,615
Number of Sequences: 37866
Number of extensions: 1083606
Number of successful extensions: 9229
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 97
Number of HSP's successfully gapped in prelim test: 1019
Number of HSP's that attempted gapping in prelim test: 7160
Number of HSP's gapped (non-prelim): 2634
length of query: 317
length of database: 18,247,518
effective HSP length: 102
effective length of query: 215
effective length of database: 14,385,186
effective search space: 3092814990
effective search space used: 3092814990
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.