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Search of human proteins with 239746026
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239746026 PREDICTED: hypothetical protein XP_002344173 [Homo
sapiens]
(183 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239746026 PREDICTED: hypothetical protein XP_002344173 [Homo ... 378 e-105
gi|239757005 PREDICTED: hypothetical protein [Homo sapiens] 376 e-105
gi|239751519 PREDICTED: hypothetical protein [Homo sapiens] 376 e-105
gi|4758876 poly(A) binding protein, nuclear 1 [Homo sapiens] 39 0.002
gi|239752797 PREDICTED: hypothetical protein [Homo sapiens] 36 0.016
gi|239747322 PREDICTED: hypothetical protein XP_002346421 [Homo ... 36 0.016
gi|239741144 PREDICTED: hypothetical protein XP_002342119 [Homo ... 36 0.016
gi|156119599 transmembrane protein 215 [Homo sapiens] 36 0.016
gi|169204930 PREDICTED: hypothetical protein [Homo sapiens] 35 0.036
gi|239750393 PREDICTED: hypothetical protein [Homo sapiens] 35 0.036
gi|239744694 PREDICTED: hypothetical protein [Homo sapiens] 35 0.036
gi|169167792 PREDICTED: similar to hCG1745223 [Homo sapiens] 35 0.047
gi|88987622 PREDICTED: similar to hCG1745223 [Homo sapiens] 35 0.047
gi|51464815 PREDICTED: similar to hCG1745223 [Homo sapiens] 35 0.047
gi|20336188 paired basic amino acid cleaving system 4 isoform e ... 34 0.061
gi|20336186 paired basic amino acid cleaving system 4 isoform c ... 34 0.061
gi|27894285 paired basic amino acid cleaving system 4 isoform f ... 34 0.061
gi|20336190 paired basic amino acid cleaving system 4 isoform d ... 34 0.061
gi|20336184 paired basic amino acid cleaving system 4 isoform h ... 34 0.061
gi|20336182 paired basic amino acid cleaving system 4 isoform g ... 34 0.061
gi|4505577 paired basic amino acid cleaving system 4 isoform a p... 34 0.061
gi|20336180 paired basic amino acid cleaving system 4 isoform b ... 34 0.061
gi|28269693 xylosyltransferase I [Homo sapiens] 34 0.080
gi|13994190 frizzled 8 [Homo sapiens] 34 0.080
gi|182507165 thymus expressed gene 3-like [Homo sapiens] 33 0.10
gi|32455273 WNK lysine deficient protein kinase 2 [Homo sapiens] 33 0.14
gi|150418009 transforming, acidic coiled-coil containing protein... 33 0.14
gi|122937424 one cut homeobox 3 [Homo sapiens] 33 0.14
gi|239743072 PREDICTED: hypothetical protein [Homo sapiens] 33 0.18
gi|239508718 PREDICTED: hypothetical protein [Homo sapiens] 33 0.18
>gi|239746026 PREDICTED: hypothetical protein XP_002344173 [Homo
sapiens]
Length = 183
Score = 378 bits (970), Expect = e-105
Identities = 183/183 (100%), Positives = 183/183 (100%)
Query: 1 MPGGGCSVTRRQFSSSLLSPQSFCWLQTSEPRYKHLPLVQVNLHSEKHLWPENQLPAYCS 60
MPGGGCSVTRRQFSSSLLSPQSFCWLQTSEPRYKHLPLVQVNLHSEKHLWPENQLPAYCS
Sbjct: 1 MPGGGCSVTRRQFSSSLLSPQSFCWLQTSEPRYKHLPLVQVNLHSEKHLWPENQLPAYCS 60
Query: 61 PDKPVLQLLRCPVEEAAGRGSGHFHLSLSKSIALLGRPLGASAAHLPGSRAGGRYLGVAP 120
PDKPVLQLLRCPVEEAAGRGSGHFHLSLSKSIALLGRPLGASAAHLPGSRAGGRYLGVAP
Sbjct: 61 PDKPVLQLLRCPVEEAAGRGSGHFHLSLSKSIALLGRPLGASAAHLPGSRAGGRYLGVAP 120
Query: 121 GRRRSLLPSAVQPGRGGHGAGGGAGPQALRTRAPLATPLPASCRVAPARGCSLSQPQLSV 180
GRRRSLLPSAVQPGRGGHGAGGGAGPQALRTRAPLATPLPASCRVAPARGCSLSQPQLSV
Sbjct: 121 GRRRSLLPSAVQPGRGGHGAGGGAGPQALRTRAPLATPLPASCRVAPARGCSLSQPQLSV 180
Query: 181 LRL 183
LRL
Sbjct: 181 LRL 183
>gi|239757005 PREDICTED: hypothetical protein [Homo sapiens]
Length = 183
Score = 376 bits (966), Expect = e-105
Identities = 182/183 (99%), Positives = 183/183 (100%)
Query: 1 MPGGGCSVTRRQFSSSLLSPQSFCWLQTSEPRYKHLPLVQVNLHSEKHLWPENQLPAYCS 60
MPGGGCSVTRRQFSSSLLSPQSFCWLQTSEPRYKHLPLVQVNLHSEKHLWPENQLPAYCS
Sbjct: 1 MPGGGCSVTRRQFSSSLLSPQSFCWLQTSEPRYKHLPLVQVNLHSEKHLWPENQLPAYCS 60
Query: 61 PDKPVLQLLRCPVEEAAGRGSGHFHLSLSKSIALLGRPLGASAAHLPGSRAGGRYLGVAP 120
PDKPVLQLLRCPVEEAAGRGSGHFHLSLS+SIALLGRPLGASAAHLPGSRAGGRYLGVAP
Sbjct: 61 PDKPVLQLLRCPVEEAAGRGSGHFHLSLSESIALLGRPLGASAAHLPGSRAGGRYLGVAP 120
Query: 121 GRRRSLLPSAVQPGRGGHGAGGGAGPQALRTRAPLATPLPASCRVAPARGCSLSQPQLSV 180
GRRRSLLPSAVQPGRGGHGAGGGAGPQALRTRAPLATPLPASCRVAPARGCSLSQPQLSV
Sbjct: 121 GRRRSLLPSAVQPGRGGHGAGGGAGPQALRTRAPLATPLPASCRVAPARGCSLSQPQLSV 180
Query: 181 LRL 183
LRL
Sbjct: 181 LRL 183
>gi|239751519 PREDICTED: hypothetical protein [Homo sapiens]
Length = 183
Score = 376 bits (966), Expect = e-105
Identities = 182/183 (99%), Positives = 183/183 (100%)
Query: 1 MPGGGCSVTRRQFSSSLLSPQSFCWLQTSEPRYKHLPLVQVNLHSEKHLWPENQLPAYCS 60
MPGGGCSVTRRQFSSSLLSPQSFCWLQTSEPRYKHLPLVQVNLHSEKHLWPENQLPAYCS
Sbjct: 1 MPGGGCSVTRRQFSSSLLSPQSFCWLQTSEPRYKHLPLVQVNLHSEKHLWPENQLPAYCS 60
Query: 61 PDKPVLQLLRCPVEEAAGRGSGHFHLSLSKSIALLGRPLGASAAHLPGSRAGGRYLGVAP 120
PDKPVLQLLRCPVEEAAGRGSGHFHLSLS+SIALLGRPLGASAAHLPGSRAGGRYLGVAP
Sbjct: 61 PDKPVLQLLRCPVEEAAGRGSGHFHLSLSESIALLGRPLGASAAHLPGSRAGGRYLGVAP 120
Query: 121 GRRRSLLPSAVQPGRGGHGAGGGAGPQALRTRAPLATPLPASCRVAPARGCSLSQPQLSV 180
GRRRSLLPSAVQPGRGGHGAGGGAGPQALRTRAPLATPLPASCRVAPARGCSLSQPQLSV
Sbjct: 121 GRRRSLLPSAVQPGRGGHGAGGGAGPQALRTRAPLATPLPASCRVAPARGCSLSQPQLSV 180
Query: 181 LRL 183
LRL
Sbjct: 181 LRL 183
>gi|4758876 poly(A) binding protein, nuclear 1 [Homo sapiens]
Length = 306
Score = 39.3 bits (90), Expect = 0.002
Identities = 24/45 (53%), Positives = 26/45 (57%), Gaps = 4/45 (8%)
Query: 101 ASAAHLPGSRAGGRYLGVAPGRRRSLLPSAVQPGRGGHGAGGGAG 145
A+AA AGGR G PGRRR L+P A G G GA GGAG
Sbjct: 4 AAAAAAAAGAAGGR--GSGPGRRRHLVPGA--GGEAGEGAPGGAG 44
>gi|239752797 PREDICTED: hypothetical protein [Homo sapiens]
Length = 347
Score = 36.2 bits (82), Expect = 0.016
Identities = 27/95 (28%), Positives = 37/95 (38%), Gaps = 4/95 (4%)
Query: 85 HLSLSKSIALLGRPLGASAAHLPGSRAGGRYLGVAP--GRRRSLLPSAVQPGRGG--HGA 140
HL + ++G PL HL R GGR A G P Q +GG G
Sbjct: 110 HLEVGDLQVVVGAPLAELQLHLFAERVGGRRPEAAAQAGSATQKAPEEAQVAQGGGARGL 169
Query: 141 GGGAGPQALRTRAPLATPLPASCRVAPARGCSLSQ 175
G GP ++ + L A+ + A GC +Q
Sbjct: 170 GRAGGPVGVQLPREVGGTLGAAAQAKGAEGCPGAQ 204
>gi|239747322 PREDICTED: hypothetical protein XP_002346421 [Homo
sapiens]
Length = 347
Score = 36.2 bits (82), Expect = 0.016
Identities = 27/95 (28%), Positives = 37/95 (38%), Gaps = 4/95 (4%)
Query: 85 HLSLSKSIALLGRPLGASAAHLPGSRAGGRYLGVAP--GRRRSLLPSAVQPGRGG--HGA 140
HL + ++G PL HL R GGR A G P Q +GG G
Sbjct: 110 HLEVGDLQVVVGAPLAELQLHLFAERVGGRRPEAAAQAGSATQKAPEEAQVAQGGGARGL 169
Query: 141 GGGAGPQALRTRAPLATPLPASCRVAPARGCSLSQ 175
G GP ++ + L A+ + A GC +Q
Sbjct: 170 GRAGGPVGVQLPREVGGTLGAAAQAKGAEGCPGAQ 204
>gi|239741144 PREDICTED: hypothetical protein XP_002342119 [Homo
sapiens]
Length = 347
Score = 36.2 bits (82), Expect = 0.016
Identities = 27/95 (28%), Positives = 37/95 (38%), Gaps = 4/95 (4%)
Query: 85 HLSLSKSIALLGRPLGASAAHLPGSRAGGRYLGVAP--GRRRSLLPSAVQPGRGG--HGA 140
HL + ++G PL HL R GGR A G P Q +GG G
Sbjct: 110 HLEVGDLQVVVGAPLAELQLHLFAERVGGRRPEAAAQAGSATQKAPEEAQVAQGGGARGL 169
Query: 141 GGGAGPQALRTRAPLATPLPASCRVAPARGCSLSQ 175
G GP ++ + L A+ + A GC +Q
Sbjct: 170 GRAGGPVGVQLPREVGGTLGAAAQAKGAEGCPGAQ 204
>gi|156119599 transmembrane protein 215 [Homo sapiens]
Length = 235
Score = 36.2 bits (82), Expect = 0.016
Identities = 22/56 (39%), Positives = 31/56 (55%), Gaps = 10/56 (17%)
Query: 50 WPENQL------PAYCSP-DKPVLQLLRCPVEEAAGRGSGHFHLSLSKSIALLGRP 98
WPEN+L P + P DK V++LLR P + +G+GS L+K L G+P
Sbjct: 69 WPENELLWVRKLPCFRKPKDKEVVELLRTPSDLESGKGSSD---ELAKKAGLRGKP 121
>gi|169204930 PREDICTED: hypothetical protein [Homo sapiens]
Length = 373
Score = 35.0 bits (79), Expect = 0.036
Identities = 41/118 (34%), Positives = 50/118 (42%), Gaps = 21/118 (17%)
Query: 79 RGSGHFHLSLSKSIALLGRPLGASAAHLPGSRAGGRYLGV-APGRRRSLLPS--AVQPGR 135
RG G + +A LG P G +AA G LGV PG LP+ A++ G
Sbjct: 148 RGWGLRPQRVRSRLAGLGAPRGGAAAPRGWGGQGAERLGVHQPG-----LPTHAALRGGG 202
Query: 136 GG-HGAGGGAGPQALRTR-APLATPLPASCRV-----------APARGCSLSQPQLSV 180
GG G GGGA P R R P P P R+ A AR LS+P +V
Sbjct: 203 GGSEGGGGGARPSPPRARQPPSGRPRPRRTRLLGSAERHTGRAALARHGQLSRPHAAV 260
>gi|239750393 PREDICTED: hypothetical protein [Homo sapiens]
Length = 373
Score = 35.0 bits (79), Expect = 0.036
Identities = 41/118 (34%), Positives = 50/118 (42%), Gaps = 21/118 (17%)
Query: 79 RGSGHFHLSLSKSIALLGRPLGASAAHLPGSRAGGRYLGV-APGRRRSLLPS--AVQPGR 135
RG G + +A LG P G +AA G LGV PG LP+ A++ G
Sbjct: 148 RGWGLRPQRVRSRLAGLGAPRGGAAAPRGWGGQGAERLGVHQPG-----LPTHAALRGGG 202
Query: 136 GG-HGAGGGAGPQALRTR-APLATPLPASCRV-----------APARGCSLSQPQLSV 180
GG G GGGA P R R P P P R+ A AR LS+P +V
Sbjct: 203 GGSEGGGGGARPSPPRARQPPSGRPRPRRTRLLGSAERHTGRAALARHGQLSRPHAAV 260
>gi|239744694 PREDICTED: hypothetical protein [Homo sapiens]
Length = 373
Score = 35.0 bits (79), Expect = 0.036
Identities = 41/118 (34%), Positives = 50/118 (42%), Gaps = 21/118 (17%)
Query: 79 RGSGHFHLSLSKSIALLGRPLGASAAHLPGSRAGGRYLGV-APGRRRSLLPS--AVQPGR 135
RG G + +A LG P G +AA G LGV PG LP+ A++ G
Sbjct: 148 RGWGLRPQRVRSRLAGLGAPRGGAAAPRGWGGQGAERLGVHQPG-----LPTHAALRGGG 202
Query: 136 GG-HGAGGGAGPQALRTR-APLATPLPASCRV-----------APARGCSLSQPQLSV 180
GG G GGGA P R R P P P R+ A AR LS+P +V
Sbjct: 203 GGSEGGGGGARPSPPRARQPPSGRPRPRRTRLLGSAERHTGRAALARHGQLSRPHAAV 260
>gi|169167792 PREDICTED: similar to hCG1745223 [Homo sapiens]
Length = 320
Score = 34.7 bits (78), Expect = 0.047
Identities = 28/74 (37%), Positives = 32/74 (43%), Gaps = 8/74 (10%)
Query: 101 ASAAHLPGSRAGGRYLGVAPGRRRSLLPSAVQPGRGGHGAGGGAGPQALRTRAPLATPLP 160
AS A P ++AG R APG S L +A P RGG GA + AP PLP
Sbjct: 235 ASRARAPDTKAGTRARDPAPGA--SQLRAAHSPHRGGGGA------PRTQLAAPPRPPLP 286
Query: 161 ASCRVAPARGCSLS 174
A CS S
Sbjct: 287 QENAAAGLASCSAS 300
>gi|88987622 PREDICTED: similar to hCG1745223 [Homo sapiens]
Length = 320
Score = 34.7 bits (78), Expect = 0.047
Identities = 28/74 (37%), Positives = 32/74 (43%), Gaps = 8/74 (10%)
Query: 101 ASAAHLPGSRAGGRYLGVAPGRRRSLLPSAVQPGRGGHGAGGGAGPQALRTRAPLATPLP 160
AS A P ++AG R APG S L +A P RGG GA + AP PLP
Sbjct: 235 ASRARAPDTKAGTRARDPAPGA--SQLRAAHSPHRGGGGA------PRTQLAAPPRPPLP 286
Query: 161 ASCRVAPARGCSLS 174
A CS S
Sbjct: 287 QENAAAGLASCSAS 300
>gi|51464815 PREDICTED: similar to hCG1745223 [Homo sapiens]
Length = 319
Score = 34.7 bits (78), Expect = 0.047
Identities = 28/74 (37%), Positives = 32/74 (43%), Gaps = 8/74 (10%)
Query: 101 ASAAHLPGSRAGGRYLGVAPGRRRSLLPSAVQPGRGGHGAGGGAGPQALRTRAPLATPLP 160
AS A P ++AG R APG S L +A P RGG GA + AP PLP
Sbjct: 234 ASRARAPDTKAGTRARDPAPGA--SQLRAAHSPHRGGGGA------PRTQLAAPPRPPLP 285
Query: 161 ASCRVAPARGCSLS 174
A CS S
Sbjct: 286 QENAAAGLASCSAS 299
>gi|20336188 paired basic amino acid cleaving system 4 isoform e
preproprotein [Homo sapiens]
Length = 623
Score = 34.3 bits (77), Expect = 0.061
Identities = 23/60 (38%), Positives = 26/60 (43%), Gaps = 9/60 (15%)
Query: 119 APGRR---RSLLPSAVQPGRGGHGAGGGAGPQALRTRAP------LATPLPASCRVAPAR 169
APG R R+ + G GG G GGAG R AP L LPA+C P R
Sbjct: 8 APGPRPPPRAAAATDTAAGAGGAGGAGGAGGPGFRPLAPRPWRWLLLLALPAACSAPPPR 67
>gi|20336186 paired basic amino acid cleaving system 4 isoform c
preproprotein [Homo sapiens]
Length = 487
Score = 34.3 bits (77), Expect = 0.061
Identities = 23/60 (38%), Positives = 26/60 (43%), Gaps = 9/60 (15%)
Query: 119 APGRR---RSLLPSAVQPGRGGHGAGGGAGPQALRTRAP------LATPLPASCRVAPAR 169
APG R R+ + G GG G GGAG R AP L LPA+C P R
Sbjct: 8 APGPRPPPRAAAATDTAAGAGGAGGAGGAGGPGFRPLAPRPWRWLLLLALPAACSAPPPR 67
>gi|27894285 paired basic amino acid cleaving system 4 isoform f
preproprotein [Homo sapiens]
Length = 664
Score = 34.3 bits (77), Expect = 0.061
Identities = 23/60 (38%), Positives = 26/60 (43%), Gaps = 9/60 (15%)
Query: 119 APGRR---RSLLPSAVQPGRGGHGAGGGAGPQALRTRAP------LATPLPASCRVAPAR 169
APG R R+ + G GG G GGAG R AP L LPA+C P R
Sbjct: 8 APGPRPPPRAAAATDTAAGAGGAGGAGGAGGPGFRPLAPRPWRWLLLLALPAACSAPPPR 67
>gi|20336190 paired basic amino acid cleaving system 4 isoform d
preproprotein [Homo sapiens]
Length = 652
Score = 34.3 bits (77), Expect = 0.061
Identities = 23/60 (38%), Positives = 26/60 (43%), Gaps = 9/60 (15%)
Query: 119 APGRR---RSLLPSAVQPGRGGHGAGGGAGPQALRTRAP------LATPLPASCRVAPAR 169
APG R R+ + G GG G GGAG R AP L LPA+C P R
Sbjct: 8 APGPRPPPRAAAATDTAAGAGGAGGAGGAGGPGFRPLAPRPWRWLLLLALPAACSAPPPR 67
>gi|20336184 paired basic amino acid cleaving system 4 isoform h
preproprotein [Homo sapiens]
Length = 962
Score = 34.3 bits (77), Expect = 0.061
Identities = 23/60 (38%), Positives = 26/60 (43%), Gaps = 9/60 (15%)
Query: 119 APGRR---RSLLPSAVQPGRGGHGAGGGAGPQALRTRAP------LATPLPASCRVAPAR 169
APG R R+ + G GG G GGAG R AP L LPA+C P R
Sbjct: 8 APGPRPPPRAAAATDTAAGAGGAGGAGGAGGPGFRPLAPRPWRWLLLLALPAACSAPPPR 67
>gi|20336182 paired basic amino acid cleaving system 4 isoform g
preproprotein [Homo sapiens]
Length = 975
Score = 34.3 bits (77), Expect = 0.061
Identities = 23/60 (38%), Positives = 26/60 (43%), Gaps = 9/60 (15%)
Query: 119 APGRR---RSLLPSAVQPGRGGHGAGGGAGPQALRTRAP------LATPLPASCRVAPAR 169
APG R R+ + G GG G GGAG R AP L LPA+C P R
Sbjct: 8 APGPRPPPRAAAATDTAAGAGGAGGAGGAGGPGFRPLAPRPWRWLLLLALPAACSAPPPR 67
>gi|4505577 paired basic amino acid cleaving system 4 isoform a
preproprotein [Homo sapiens]
Length = 969
Score = 34.3 bits (77), Expect = 0.061
Identities = 23/60 (38%), Positives = 26/60 (43%), Gaps = 9/60 (15%)
Query: 119 APGRR---RSLLPSAVQPGRGGHGAGGGAGPQALRTRAP------LATPLPASCRVAPAR 169
APG R R+ + G GG G GGAG R AP L LPA+C P R
Sbjct: 8 APGPRPPPRAAAATDTAAGAGGAGGAGGAGGPGFRPLAPRPWRWLLLLALPAACSAPPPR 67
>gi|20336180 paired basic amino acid cleaving system 4 isoform b
preproprotein [Homo sapiens]
Length = 956
Score = 34.3 bits (77), Expect = 0.061
Identities = 23/60 (38%), Positives = 26/60 (43%), Gaps = 9/60 (15%)
Query: 119 APGRR---RSLLPSAVQPGRGGHGAGGGAGPQALRTRAP------LATPLPASCRVAPAR 169
APG R R+ + G GG G GGAG R AP L LPA+C P R
Sbjct: 8 APGPRPPPRAAAATDTAAGAGGAGGAGGAGGPGFRPLAPRPWRWLLLLALPAACSAPPPR 67
>gi|28269693 xylosyltransferase I [Homo sapiens]
Length = 959
Score = 33.9 bits (76), Expect = 0.080
Identities = 29/77 (37%), Positives = 31/77 (40%), Gaps = 15/77 (19%)
Query: 108 GSRAGGRYLG--------VAPGRRRSLLPSAVQPGRGGHGAGGGA----GPQALRTRAPL 155
G R GG +G AP R R LP+ RGG G GGG GPQA
Sbjct: 43 GERRGGAAVGGGEQPPPAPAPRRERRDLPAEPAAARGGGGGGGGGGGGRGPQARARGGGP 102
Query: 156 ATP---LPASCRVAPAR 169
P PAS PAR
Sbjct: 103 GEPRGQQPASRGALPAR 119
>gi|13994190 frizzled 8 [Homo sapiens]
Length = 694
Score = 33.9 bits (76), Expect = 0.080
Identities = 31/94 (32%), Positives = 34/94 (36%), Gaps = 32/94 (34%)
Query: 72 PVEEAAGRGSGHFHLSLSKSIALLGRPLGASAAHLPGSRAGGRYLGVAPGRRRSLLPSAV 131
P E GSGH GRP GA H G R GG AP
Sbjct: 171 PPGEQPPSGSGH------------GRPPGARPPHRGGGRGGGGGDAAAP----------- 207
Query: 132 QPGRGGHGA------GGGAGP--QALRTRAPLAT 157
P RGG G GGGA P + RAP+ +
Sbjct: 208 -PARGGGGGGKARPPGGGAAPCEPGCQCRAPMVS 240
>gi|182507165 thymus expressed gene 3-like [Homo sapiens]
Length = 629
Score = 33.5 bits (75), Expect = 0.10
Identities = 30/82 (36%), Positives = 37/82 (45%), Gaps = 5/82 (6%)
Query: 97 RPLGASAAHLPGSRAGGRYLG--VAPGRRRSLLPSAVQPGRGGHGAGGGAGPQ-ALRTRA 153
RP G P + GR L ++ RR A QP GA GG Q ++R R
Sbjct: 230 RPCGRPPTDSPDAGGAGRPLDGYISALLRRRRRRGAGQPRTSPGGADGGPRRQNSVRQRP 289
Query: 154 PLATPLPASCRVAPARGCSLSQ 175
P A+P P S R PAR SL +
Sbjct: 290 PDASPSPGSAR--PAREPSLER 309
>gi|32455273 WNK lysine deficient protein kinase 2 [Homo sapiens]
Length = 2217
Score = 33.1 bits (74), Expect = 0.14
Identities = 18/50 (36%), Positives = 26/50 (52%)
Query: 119 APGRRRSLLPSAVQPGRGGHGAGGGAGPQALRTRAPLATPLPASCRVAPA 168
A GR + P+A+ G GA AGP+ + T+ P P+ A+ APA
Sbjct: 89 ARGRPAAPAPAALVAQPGAPGAPADAGPEPVGTQEPGPDPIAAAVETAPA 138
>gi|150418009 transforming, acidic coiled-coil containing protein 2
isoform a [Homo sapiens]
Length = 2948
Score = 33.1 bits (74), Expect = 0.14
Identities = 31/90 (34%), Positives = 39/90 (43%), Gaps = 5/90 (5%)
Query: 74 EEAAGRGS-GHFHLSLSKSIALLGRPLGAS-AAHLPGSRAGGRYLGVAPGRRRSLLPSAV 131
++ AG H L S LLG P G + +LPG+ G GV P R P
Sbjct: 1476 QQLAGEAEISHLALQDPASDKLLG-PAGLTWERNLPGAGVGKEMAGVPPTLREDERPEG- 1533
Query: 132 QPGRGGHGAGGGAGPQALRTRAPLATPLPA 161
PG G G A Q R+R LA+ LP+
Sbjct: 1534 -PGAAWPGLEGQAYSQLERSRQELASGLPS 1562
>gi|122937424 one cut homeobox 3 [Homo sapiens]
Length = 494
Score = 33.1 bits (74), Expect = 0.14
Identities = 24/57 (42%), Positives = 26/57 (45%), Gaps = 4/57 (7%)
Query: 93 ALLGRPLGASAAHLPG----SRAGGRYLGVAPGRRRSLLPSAVQPGRGGHGAGGGAG 145
ALLGR A A LPG + +GG G A G L A G HG GGG G
Sbjct: 250 ALLGRAEDALARGLPGGGGGTGSGGAGSGSAAGLLAPLGGLAAAGAHGPHGGGGGPG 306
Score = 28.5 bits (62), Expect = 3.4
Identities = 36/141 (25%), Positives = 43/141 (30%), Gaps = 41/141 (29%)
Query: 56 PAYCSPDKPVLQLLRCPV---------EEAAGRGSGHFHLSLSKSIALLGRPLGA----- 101
PA P P Q L V E AA GH + K + +G PL
Sbjct: 147 PAAAPPPPPPPQRLAASVSGSFTLMRDERAALASVGHLYGPYGKELPAMGSPLSPLPNAL 206
Query: 102 -------------------SAAHLPGSRAGGRYLGVAP--------GRRRSLLPSAVQPG 134
+A PG AG + L A GR L + G
Sbjct: 207 PPALHGAPQPPPPPPPPPLAAYGPPGHLAGDKLLPPAAFEPHAALLGRAEDALARGLPGG 266
Query: 135 RGGHGAGGGAGPQALRTRAPL 155
GG G+GG A APL
Sbjct: 267 GGGTGSGGAGSGSAAGLLAPL 287
Score = 27.7 bits (60), Expect = 5.7
Identities = 31/85 (36%), Positives = 33/85 (38%), Gaps = 15/85 (17%)
Query: 102 SAAHLPGSRAGGRYLGVAPGR------RRSLLPSAVQPGRGGHGAGGGAGPQ--ALRTRA 153
S H + A R L VAPGR SLL G GG G GGAG R
Sbjct: 24 SPGHARSAAAQHRGL-VAPGRPGLVAGMASLLDGGGGGGGGGAGGAGGAGSAGGGADFRG 82
Query: 154 PLATPLPASCRVAPARGCSLSQPQL 178
LA PL PA G + P L
Sbjct: 83 ELAGPL------HPAMGMACEAPGL 101
>gi|239743072 PREDICTED: hypothetical protein [Homo sapiens]
Length = 837
Score = 32.7 bits (73), Expect = 0.18
Identities = 38/132 (28%), Positives = 49/132 (37%), Gaps = 23/132 (17%)
Query: 56 PAYCSPDKPVLQLLRCPVEEAAGRGSGHFHLSLSKSIALLGRPLGASAAHLPGSRA---- 111
P + D+ +L PV+ G G G S+AL G + L G RA
Sbjct: 551 PLERADDRVLLAQALGPVQRPRGAG-GRLQDPWPASLALAGPGIARLGCDLDGPRALVEG 609
Query: 112 -GGRYLGVAPGRRRSLLPSAVQPGRGGHGAGGGAGPQALRTRAPLATPLPASCRVA---- 166
GR+ G G G GG G G G GP + R ++ P+SCR A
Sbjct: 610 LHGRHEGGPLGGA----------GGGGSGEGQGRGPGS-RVSVRRSSRAPSSCRAASLAP 658
Query: 167 --PARGCSLSQP 176
PA S P
Sbjct: 659 PRPASATSAGSP 670
>gi|239508718 PREDICTED: hypothetical protein [Homo sapiens]
Length = 837
Score = 32.7 bits (73), Expect = 0.18
Identities = 38/132 (28%), Positives = 49/132 (37%), Gaps = 23/132 (17%)
Query: 56 PAYCSPDKPVLQLLRCPVEEAAGRGSGHFHLSLSKSIALLGRPLGASAAHLPGSRA---- 111
P + D+ +L PV+ G G G S+AL G + L G RA
Sbjct: 551 PLERADDRVLLAQALGPVQRPRGAG-GRLQDPWPASLALAGPGIARLGCDLDGPRALVEG 609
Query: 112 -GGRYLGVAPGRRRSLLPSAVQPGRGGHGAGGGAGPQALRTRAPLATPLPASCRVA---- 166
GR+ G G G GG G G G GP + R ++ P+SCR A
Sbjct: 610 LHGRHEGGPLGGA----------GGGGSGEGQGRGPGS-RVSVRRSSRAPSSCRAASLAP 658
Query: 167 --PARGCSLSQP 176
PA S P
Sbjct: 659 PRPASATSAGSP 670
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.136 0.429
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,159,008
Number of Sequences: 37866
Number of extensions: 529424
Number of successful extensions: 3905
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 70
Number of HSP's successfully gapped in prelim test: 241
Number of HSP's that attempted gapping in prelim test: 3501
Number of HSP's gapped (non-prelim): 567
length of query: 183
length of database: 18,247,518
effective HSP length: 96
effective length of query: 87
effective length of database: 14,612,382
effective search space: 1271277234
effective search space used: 1271277234
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.