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Search of human proteins with 239742747
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239742747 PREDICTED: hypothetical protein XP_002342617 [Homo
sapiens]
(283 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239742747 PREDICTED: hypothetical protein XP_002342617 [Homo ... 592 e-169
gi|53832011 calcium channel, voltage-dependent, T type, alpha 1H... 40 0.003
gi|53832009 calcium channel, voltage-dependent, T type, alpha 1H... 40 0.003
gi|239751558 PREDICTED: similar to hCG1790759 [Homo sapiens] 38 0.009
gi|169212818 PREDICTED: similar to hCG1790759 [Homo sapiens] 38 0.009
gi|169162152 PREDICTED: hypothetical protein [Homo sapiens] 36 0.033
gi|169161145 PREDICTED: hypothetical protein [Homo sapiens] 36 0.033
gi|5031805 insulin receptor substrate 1 [Homo sapiens] 33 0.22
gi|169160903 PREDICTED: hypothetical protein [Homo sapiens] 33 0.22
gi|112382285 exostoses-like 1 [Homo sapiens] 33 0.28
gi|169173306 PREDICTED: hypothetical protein [Homo sapiens] 32 0.48
gi|239749695 PREDICTED: hypothetical protein XP_002347121 [Homo ... 32 0.48
gi|239743961 PREDICTED: hypothetical protein XP_002344246 [Homo ... 32 0.48
gi|110832843 TBP-associated factor 4 [Homo sapiens] 32 0.48
gi|239755634 PREDICTED: hypothetical protein [Homo sapiens] 32 0.63
gi|239750121 PREDICTED: hypothetical protein XP_002347280 [Homo ... 32 0.63
gi|239744429 PREDICTED: hypothetical protein XP_002343157 [Homo ... 32 0.63
gi|60498978 elastin microfibril interfacer 2 [Homo sapiens] 32 0.63
gi|68563515 keratinocyte proline-rich protein [Homo sapiens] 32 0.63
gi|118402590 myosin XV [Homo sapiens] 31 1.1
gi|195972805 myocyte enhancer factor 2A isoform 4 [Homo sapiens] 31 1.1
gi|195972801 myocyte enhancer factor 2A isoform 2 [Homo sapiens] 31 1.1
gi|195972799 myocyte enhancer factor 2A isoform 1 [Homo sapiens] 31 1.1
gi|5174545 myocyte enhancer factor 2D [Homo sapiens] 31 1.1
gi|239754297 PREDICTED: hypothetical protein [Homo sapiens] 31 1.1
gi|239748836 PREDICTED: hypothetical protein XP_002346833 [Homo ... 31 1.1
gi|239742863 PREDICTED: hypothetical protein XP_002342665 [Homo ... 31 1.1
gi|56549117 dynamin 1 isoform 2 [Homo sapiens] 31 1.1
gi|59853099 dynamin 1 isoform 1 [Homo sapiens] 31 1.1
gi|95007020 transmembrane protein 70 isoform b [Homo sapiens] 31 1.1
>gi|239742747 PREDICTED: hypothetical protein XP_002342617 [Homo
sapiens]
Length = 283
Score = 592 bits (1526), Expect = e-169
Identities = 283/283 (100%), Positives = 283/283 (100%)
Query: 1 MRPDSRRKATHYVENAESSHKWASSTVRSVIHPKAQASTATYLDWDTKEESCQVRGEQNY 60
MRPDSRRKATHYVENAESSHKWASSTVRSVIHPKAQASTATYLDWDTKEESCQVRGEQNY
Sbjct: 1 MRPDSRRKATHYVENAESSHKWASSTVRSVIHPKAQASTATYLDWDTKEESCQVRGEQNY 60
Query: 61 QGLHPISTCSRDRQTLADAVASSPKGRGLCCARRSPPKRCFAGHNSLEPLLTGRSLPRPL 120
QGLHPISTCSRDRQTLADAVASSPKGRGLCCARRSPPKRCFAGHNSLEPLLTGRSLPRPL
Sbjct: 61 QGLHPISTCSRDRQTLADAVASSPKGRGLCCARRSPPKRCFAGHNSLEPLLTGRSLPRPL 120
Query: 121 AHGEEPHYPFGRRGTPPDVRTSNSGAPTASAARPPCSITTKNCCKGAWSASRLRPRLRAD 180
AHGEEPHYPFGRRGTPPDVRTSNSGAPTASAARPPCSITTKNCCKGAWSASRLRPRLRAD
Sbjct: 121 AHGEEPHYPFGRRGTPPDVRTSNSGAPTASAARPPCSITTKNCCKGAWSASRLRPRLRAD 180
Query: 181 WSNTLMLSFIMCIRLARSSIIWHLEAPTCARRAVPAVPAAQPRGRAQRAPAARRQVPGGP 240
WSNTLMLSFIMCIRLARSSIIWHLEAPTCARRAVPAVPAAQPRGRAQRAPAARRQVPGGP
Sbjct: 181 WSNTLMLSFIMCIRLARSSIIWHLEAPTCARRAVPAVPAAQPRGRAQRAPAARRQVPGGP 240
Query: 241 ACQGQDGRRPALGRPRPRCAPQVAWAGQLASVHDLKLFSRLKR 283
ACQGQDGRRPALGRPRPRCAPQVAWAGQLASVHDLKLFSRLKR
Sbjct: 241 ACQGQDGRRPALGRPRPRCAPQVAWAGQLASVHDLKLFSRLKR 283
>gi|53832011 calcium channel, voltage-dependent, T type, alpha 1H
subunit isoform b [Homo sapiens]
Length = 2347
Score = 39.7 bits (91), Expect = 0.003
Identities = 40/132 (30%), Positives = 55/132 (41%), Gaps = 22/132 (16%)
Query: 46 DTKEESCQVRGEQNYQGLHPISTCSRDRQTLADAVASSPKGRGLCCARRSPPK-RCFAGH 104
DT E+ V E+++ L + T +LA +GRG SPP C A
Sbjct: 1028 DTDEDKTSVHFEEDFHKLRELQTTELKMCSLAVTPNGHLEGRGSL----SPPLIMCTAA- 1082
Query: 105 NSLEPLLTGRSLPRPLAHGEEPHYPFGRRGTPPDVRTSNSGAPTASAARPPCSITTKNCC 164
P+ T +S P A P P RRG+ S+SG P +PP S+ + C
Sbjct: 1083 ---TPMPTPKSSPFLDA---APSLPDSRRGS------SSSGDPPLGDQKPPASLRSSPCA 1130
Query: 165 ----KGAWSASR 172
GAWS+ R
Sbjct: 1131 PWGPSGAWSSRR 1142
>gi|53832009 calcium channel, voltage-dependent, T type, alpha 1H
subunit isoform a [Homo sapiens]
Length = 2353
Score = 39.7 bits (91), Expect = 0.003
Identities = 40/132 (30%), Positives = 55/132 (41%), Gaps = 22/132 (16%)
Query: 46 DTKEESCQVRGEQNYQGLHPISTCSRDRQTLADAVASSPKGRGLCCARRSPPK-RCFAGH 104
DT E+ V E+++ L + T +LA +GRG SPP C A
Sbjct: 1028 DTDEDKTSVHFEEDFHKLRELQTTELKMCSLAVTPNGHLEGRGSL----SPPLIMCTAA- 1082
Query: 105 NSLEPLLTGRSLPRPLAHGEEPHYPFGRRGTPPDVRTSNSGAPTASAARPPCSITTKNCC 164
P+ T +S P A P P RRG+ S+SG P +PP S+ + C
Sbjct: 1083 ---TPMPTPKSSPFLDA---APSLPDSRRGS------SSSGDPPLGDQKPPASLRSSPCA 1130
Query: 165 ----KGAWSASR 172
GAWS+ R
Sbjct: 1131 PWGPSGAWSSRR 1142
>gi|239751558 PREDICTED: similar to hCG1790759 [Homo sapiens]
Length = 771
Score = 38.1 bits (87), Expect = 0.009
Identities = 46/147 (31%), Positives = 58/147 (39%), Gaps = 18/147 (12%)
Query: 129 PFGRRGTPPDVRTSNSGAPTASAAR--PPCSITT--KNCCKGAWSASRLRPRLRADWSNT 184
P R PPD S P +AAR C T K+C L P L + +SN
Sbjct: 68 PMKNRAKPPDFSEPLSQLPDLTAARIFESCMSDTSGKDCTLLRSHREVLDPSLSSSFSNF 127
Query: 185 LMLSFIMCIRLARSSIIWHLEAPTCARRAVPAVPAAQPRGRAQRAPAARRQVPGGPACQG 244
+ R+ SS + A RA PA P ++ RG A APA + A +G
Sbjct: 128 QEKT----ARILASSFAAGVRRSLRA-RASPAAPLSESRGGA--APAGFKGTAPAEA-RG 179
Query: 245 QDGRR------PALGRPRPRCAPQVAW 265
GRR P+ RP P P AW
Sbjct: 180 PGGRRFSGLLTPSAARPDPPAPPAQAW 206
>gi|169212818 PREDICTED: similar to hCG1790759 [Homo sapiens]
Length = 771
Score = 38.1 bits (87), Expect = 0.009
Identities = 46/147 (31%), Positives = 58/147 (39%), Gaps = 18/147 (12%)
Query: 129 PFGRRGTPPDVRTSNSGAPTASAAR--PPCSITT--KNCCKGAWSASRLRPRLRADWSNT 184
P R PPD S P +AAR C T K+C L P L + +SN
Sbjct: 68 PMKNRAKPPDFSEPLSQLPDLTAARIFESCMSDTSGKDCTLLRSHREVLDPSLSSSFSNF 127
Query: 185 LMLSFIMCIRLARSSIIWHLEAPTCARRAVPAVPAAQPRGRAQRAPAARRQVPGGPACQG 244
+ R+ SS + A RA PA P ++ RG A APA + A +G
Sbjct: 128 QEKT----ARILASSFAAGVRRSLRA-RASPAAPLSESRGGA--APAGFKGTAPAEA-RG 179
Query: 245 QDGRR------PALGRPRPRCAPQVAW 265
GRR P+ RP P P AW
Sbjct: 180 PGGRRFSGLLTPSAARPDPPAPPAQAW 206
>gi|169162152 PREDICTED: hypothetical protein [Homo sapiens]
Length = 520
Score = 36.2 bits (82), Expect = 0.033
Identities = 43/150 (28%), Positives = 58/150 (38%), Gaps = 18/150 (12%)
Query: 118 RPLAHGEEPHYPFGRRGTPPDVRTSNSGAPTASAARPPCSITTKNCCKGAWSASRLRPRL 177
RP A G P R + +++ + AS AR P + + G+ S RL L
Sbjct: 247 RPAARGSAQQPPLAR------LLLASAVSLAASLARSPPPLQPR---LGSASPPRLAAPL 297
Query: 178 RADWSNTLMLSFIMCIRLARSSIIWH-LEAPTCARRAVPAVPAAQPRGRAQRAPAARRQ- 235
+ +L C R A S H L P R V A + RG +R RRQ
Sbjct: 298 AGSRAPSLSPFPRRCRRRAERSPAGHGLPLPRSLSRGGEVVGARRRRGGEERRVRGRRQG 357
Query: 236 -------VPGGPACQGQDGRRPALGRPRPR 258
+P GPA G+ G R A + R R
Sbjct: 358 CALGSPPIPAGPAAPGRAGERRAARQWRKR 387
>gi|169161145 PREDICTED: hypothetical protein [Homo sapiens]
Length = 520
Score = 36.2 bits (82), Expect = 0.033
Identities = 43/150 (28%), Positives = 58/150 (38%), Gaps = 18/150 (12%)
Query: 118 RPLAHGEEPHYPFGRRGTPPDVRTSNSGAPTASAARPPCSITTKNCCKGAWSASRLRPRL 177
RP A G P R + +++ + AS AR P + + G+ S RL L
Sbjct: 247 RPAARGSAQQPPLAR------LLLASAVSLAASLARSPPPLQPR---LGSASPPRLAAPL 297
Query: 178 RADWSNTLMLSFIMCIRLARSSIIWH-LEAPTCARRAVPAVPAAQPRGRAQRAPAARRQ- 235
+ +L C R A S H L P R V A + RG +R RRQ
Sbjct: 298 AGSRAPSLSPFPRRCRRRAERSPAGHGLPLPRSLSRGGEVVGARRRRGGEERRVRGRRQG 357
Query: 236 -------VPGGPACQGQDGRRPALGRPRPR 258
+P GPA G+ G R A + R R
Sbjct: 358 CALGSPPIPAGPAAPGRAGERRAARQWRKR 387
>gi|5031805 insulin receptor substrate 1 [Homo sapiens]
Length = 1242
Score = 33.5 bits (75), Expect = 0.22
Identities = 26/86 (30%), Positives = 38/86 (44%), Gaps = 3/86 (3%)
Query: 95 SPPKRCFAGHNSLE--PLLTGRSLPRPLAHGEEPHYP-FGRRGTPPDVRTSNSGAPTASA 151
S P C+ G + P+L+ SLPR H + P P G R + TS+ A+
Sbjct: 744 SSPSDCYYGPEDPQHKPVLSYYSLPRSFKHTQRPGEPEEGARHQHLRLSTSSGRLLYAAT 803
Query: 152 ARPPCSITTKNCCKGAWSASRLRPRL 177
A S T+ + G + +RL P L
Sbjct: 804 ADDSSSSTSSDSLGGGYCGARLEPSL 829
>gi|169160903 PREDICTED: hypothetical protein [Homo sapiens]
Length = 426
Score = 33.5 bits (75), Expect = 0.22
Identities = 50/209 (23%), Positives = 67/209 (32%), Gaps = 31/209 (14%)
Query: 73 RQTLADAVASSPKGRGLCCARRSPPKRCFAGHNSLEPLLTGRSLPRPLAHGEEPHYPFGR 132
R+ +P+ RG C P +R P R+ P P
Sbjct: 93 REASPGPAPGAPRARGSCGREPGPRRRRAPSSAGKRPAAAARAAP--------PRQRSLA 144
Query: 133 RGTPPDVRTSNSGAPTASAARPPCSITTKNCCK--------------GAWSASRLRPRLR 178
R P V + + S R C + C+ G+ S RL L
Sbjct: 145 RCLPRSVGSCVRPSVGPSLPRRHCRRHCRCHCRRRPLPKPPPLQPRLGSASPPRLAAPLA 204
Query: 179 ADWSNTLMLSFIMCIRLARSSIIWH-LEAPTCARRAVPAVPAAQPRGRAQRAPAARRQ-- 235
+ +L C R A S H L P R V A + RG +R RRQ
Sbjct: 205 GSRAPSLSPFPRRCRRRAERSPAGHGLPLPRSLSRGGEVVGARRRRGGEERRVRGRRQGC 264
Query: 236 ------VPGGPACQGQDGRRPALGRPRPR 258
+P GPA G+ G R A + R R
Sbjct: 265 ALGSPPIPAGPAAPGRAGERRAARQWRKR 293
>gi|112382285 exostoses-like 1 [Homo sapiens]
Length = 676
Score = 33.1 bits (74), Expect = 0.28
Identities = 19/62 (30%), Positives = 27/62 (43%)
Query: 205 EAPTCARRAVPAVPAAQPRGRAQRAPAARRQVPGGPACQGQDGRRPALGRPRPRCAPQVA 264
EAPTC + + AA + + P +++ P G G RP P P C Q+A
Sbjct: 580 EAPTCVDVLMNFIVAAVTKLPPIKVPYGKQRQEAAPLAPGGPGPRPKPPAPAPDCINQIA 639
Query: 265 WA 266
A
Sbjct: 640 AA 641
>gi|169173306 PREDICTED: hypothetical protein [Homo sapiens]
Length = 281
Score = 32.3 bits (72), Expect = 0.48
Identities = 43/151 (28%), Positives = 51/151 (33%), Gaps = 35/151 (23%)
Query: 115 SLPRPLAHGEEPHYP---FGRRGTPPDVRTSNSGAPTASAARPPCSITTKNCCKGAWSAS 171
+LPRP P +P RR V+ +P AS ARP + C W
Sbjct: 34 ALPRP--GFPAPGFPALRLPRRRAQLGVKLGGGPSP-ASGARPSPHLEGAGCETRPWLGP 90
Query: 172 RLRPRLRADWSNTLMLSFIMCIRLARSSIIWHLEAPTCARRAVPAVPAAQPRGRAQRAPA 231
R R RL HL+ P AR+ P A R R QRAP
Sbjct: 91 RPRRRLAL-----------------------HLQVPEGARQLGPRTGAQPSRHRRQRAPG 127
Query: 232 ARRQVPGGPACQGQDGRRPALGRPRPRCAPQ 262
V G RPA G P AP+
Sbjct: 128 LALVVTGVSRI------RPAHGAPGLPRAPK 152
>gi|239749695 PREDICTED: hypothetical protein XP_002347121 [Homo
sapiens]
Length = 594
Score = 32.3 bits (72), Expect = 0.48
Identities = 21/55 (38%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Query: 206 APTCARRAVPAVPAAQPRGRAQRAP--AARRQVPGGPACQGQDGRRPALGRPRPR 258
AP +R +P +PA P +R P AA+R GG +G AL PRPR
Sbjct: 488 APRPSRVLLPELPAVDPARDTRREPDAAAQRTELGGRVGKGPGAPPSALPGPRPR 542
>gi|239743961 PREDICTED: hypothetical protein XP_002344246 [Homo
sapiens]
Length = 594
Score = 32.3 bits (72), Expect = 0.48
Identities = 21/55 (38%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Query: 206 APTCARRAVPAVPAAQPRGRAQRAP--AARRQVPGGPACQGQDGRRPALGRPRPR 258
AP +R +P +PA P +R P AA+R GG +G AL PRPR
Sbjct: 488 APRPSRVLLPELPAVDPARDTRREPDAAAQRTELGGRVGKGPGAPPSALPGPRPR 542
>gi|110832843 TBP-associated factor 4 [Homo sapiens]
Length = 1085
Score = 32.3 bits (72), Expect = 0.48
Identities = 21/55 (38%), Positives = 21/55 (38%)
Query: 203 HLEAPTCARRAVPAVPAAQPRGRAQRAPAARRQVPGGPACQGQDGRRPALGRPRP 257
H P A AVP AAQ G A APA G GQ G A P P
Sbjct: 286 HPAGPPTAAPAVPPPAAAQNGGSAGAAPAPAPAAGGPAGVSGQPGPGAAAAAPAP 340
Score = 28.9 bits (63), Expect = 5.3
Identities = 22/53 (41%), Positives = 23/53 (43%), Gaps = 7/53 (13%)
Query: 206 APTCARRAVPAVPAAQPRGRAQRAPAARRQVPGGPACQGQDGRRPALGRPRPR 258
+P A A PA PA G A P A R PGG Q RP G P PR
Sbjct: 66 SPAGAAGAGPAAPAEGAPGAAPEPPPAGRARPGGGGPQ-----RP--GPPSPR 111
>gi|239755634 PREDICTED: hypothetical protein [Homo sapiens]
Length = 449
Score = 32.0 bits (71), Expect = 0.63
Identities = 17/40 (42%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Query: 209 CARRAVPAVPAAQPRGRAQRAPAARRQVPGGPACQGQDGR 248
C RR++P+V + RGRA+R PA + V GG +D R
Sbjct: 36 CGRRSLPSV-SGPVRGRAERRPARGKHVRGGGVGGCRDSR 74
>gi|239750121 PREDICTED: hypothetical protein XP_002347280 [Homo
sapiens]
Length = 402
Score = 32.0 bits (71), Expect = 0.63
Identities = 17/40 (42%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Query: 209 CARRAVPAVPAAQPRGRAQRAPAARRQVPGGPACQGQDGR 248
C RR++P+V + RGRA+R PA + V GG +D R
Sbjct: 36 CGRRSLPSV-SGPVRGRAERRPARGKHVRGGGVGGCRDSR 74
>gi|239744429 PREDICTED: hypothetical protein XP_002343157 [Homo
sapiens]
Length = 449
Score = 32.0 bits (71), Expect = 0.63
Identities = 17/40 (42%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Query: 209 CARRAVPAVPAAQPRGRAQRAPAARRQVPGGPACQGQDGR 248
C RR++P+V + RGRA+R PA + V GG +D R
Sbjct: 36 CGRRSLPSV-SGPVRGRAERRPARGKHVRGGGVGGCRDSR 74
>gi|60498978 elastin microfibril interfacer 2 [Homo sapiens]
Length = 1053
Score = 32.0 bits (71), Expect = 0.63
Identities = 20/52 (38%), Positives = 23/52 (44%), Gaps = 2/52 (3%)
Query: 210 ARRAVPAVPAAQPRGRAQRAPAARRQVPGGPACQGQDGRRPALGRPRPRCAP 261
A+ P PA P+ Q PA R P GPA GRRP L + P P
Sbjct: 786 AKAPSPPPPAEAPKEPLQPEPAPPR--PSGPATAEDPGRRPVLPQRPPEERP 835
>gi|68563515 keratinocyte proline-rich protein [Homo sapiens]
Length = 579
Score = 32.0 bits (71), Expect = 0.63
Identities = 16/36 (44%), Positives = 20/36 (55%), Gaps = 5/36 (13%)
Query: 65 PISTCSRDRQTLADAVASSPKGRGLCCARRSPPKRC 100
PIS+CS+ R SSP CC R+ PP+RC
Sbjct: 313 PISSCSQRRGPKCRIEISSP-----CCPRQVPPQRC 343
>gi|118402590 myosin XV [Homo sapiens]
Length = 3530
Score = 31.2 bits (69), Expect = 1.1
Identities = 51/186 (27%), Positives = 65/186 (34%), Gaps = 34/186 (18%)
Query: 60 YQGLHPISTCSRDRQTLAD---AVASSPKGRGLCCARRSP-PKRCFAGHNSLEPLLTGRS 115
+ G P ++ R LA ++ SSP G G C P P+ P L
Sbjct: 757 FPGASPRASRRRAWSPLASPQPSLRSSP-GLGYCSPLAPPSPQLSLRTGPFQPPFLPPAR 815
Query: 116 LPRPLAHGEEPHYPFGRRGTPPDVRTSNSGAPTASAARPPCSITTKNCCKGAWSASRLRP 175
PR L P GR G P G+P + RPP S C S+ L
Sbjct: 816 RPRSLQESPAPRRAAGRLGPP--------GSPLPGSPRPP-SPPLGLCHSPRRSSLNLPS 866
Query: 176 RLRADWSNTLMLSFIMCIRLARSSIIWHLEAPTCARRAVPAVPAAQP-RGRAQRAPAARR 234
RL W RL+ E PT A + +P +P R A RAP R
Sbjct: 867 RLPHTWR-----------RLS--------EPPTRAVKPQVRLPFHRPPRAGAWRAPLEHR 907
Query: 235 QVPGGP 240
+ P P
Sbjct: 908 ESPREP 913
>gi|195972805 myocyte enhancer factor 2A isoform 4 [Homo sapiens]
Length = 429
Score = 31.2 bits (69), Expect = 1.1
Identities = 32/121 (26%), Positives = 47/121 (38%), Gaps = 11/121 (9%)
Query: 75 TLADAVASSPKGRGLCCARRSPPKRCFAGHNSLEPLLTGRSLPRPLA-----HGEEPH-- 127
T+ + SSP G G +R SP G NSL ++ +S P P + +P
Sbjct: 145 TVPNGAGSSPVGNGFVNSRASPNLIGATGANSLGKVMPTKSPPPPGGGNLGMNSRKPDLR 204
Query: 128 --YPFGRRGTPPDVRTS--NSGAPTASAARPPCSITTKNCCKGAWSASRLRPRLRADWSN 183
P +G P + T +S T A P S+TT + S + D+S
Sbjct: 205 VVIPPSSKGMMPPLNTQRISSSQATQPLATPVVSVTTPSLPPQGLVYSAMPTAYNTDYSL 264
Query: 184 T 184
T
Sbjct: 265 T 265
>gi|195972801 myocyte enhancer factor 2A isoform 2 [Homo sapiens]
Length = 497
Score = 31.2 bits (69), Expect = 1.1
Identities = 32/121 (26%), Positives = 47/121 (38%), Gaps = 11/121 (9%)
Query: 75 TLADAVASSPKGRGLCCARRSPPKRCFAGHNSLEPLLTGRSLPRPLA-----HGEEPH-- 127
T+ + SSP G G +R SP G NSL ++ +S P P + +P
Sbjct: 213 TVPNGAGSSPVGNGFVNSRASPNLIGATGANSLGKVMPTKSPPPPGGGNLGMNSRKPDLR 272
Query: 128 --YPFGRRGTPPDVRTS--NSGAPTASAARPPCSITTKNCCKGAWSASRLRPRLRADWSN 183
P +G P + T +S T A P S+TT + S + D+S
Sbjct: 273 VVIPPSSKGMMPPLNTQRISSSQATQPLATPVVSVTTPSLPPQGLVYSAMPTAYNTDYSL 332
Query: 184 T 184
T
Sbjct: 333 T 333
>gi|195972799 myocyte enhancer factor 2A isoform 1 [Homo sapiens]
Length = 499
Score = 31.2 bits (69), Expect = 1.1
Identities = 32/121 (26%), Positives = 47/121 (38%), Gaps = 11/121 (9%)
Query: 75 TLADAVASSPKGRGLCCARRSPPKRCFAGHNSLEPLLTGRSLPRPLA-----HGEEPH-- 127
T+ + SSP G G +R SP G NSL ++ +S P P + +P
Sbjct: 215 TVPNGAGSSPVGNGFVNSRASPNLIGATGANSLGKVMPTKSPPPPGGGNLGMNSRKPDLR 274
Query: 128 --YPFGRRGTPPDVRTS--NSGAPTASAARPPCSITTKNCCKGAWSASRLRPRLRADWSN 183
P +G P + T +S T A P S+TT + S + D+S
Sbjct: 275 VVIPPSSKGMMPPLNTQRISSSQATQPLATPVVSVTTPSLPPQGLVYSAMPTAYNTDYSL 334
Query: 184 T 184
T
Sbjct: 335 T 335
>gi|5174545 myocyte enhancer factor 2D [Homo sapiens]
Length = 521
Score = 31.2 bits (69), Expect = 1.1
Identities = 23/70 (32%), Positives = 29/70 (41%), Gaps = 5/70 (7%)
Query: 77 ADAVASSPKGRGLCCARRSPPKRCFAGHNSLEPLLTGRSLPRPLAHGEEPHYPFGRRGTP 136
A+ SP G G AR SP A NSL ++ +S P P H + G
Sbjct: 213 ANGACPSPVGNGYVSARASPGLLPVANGNSLNKVIPAKS-PPPPTHSTQ----LGAPSRK 267
Query: 137 PDVRTSNSGA 146
PD+R S A
Sbjct: 268 PDLRVITSQA 277
>gi|239754297 PREDICTED: hypothetical protein [Homo sapiens]
Length = 175
Score = 31.2 bits (69), Expect = 1.1
Identities = 24/61 (39%), Positives = 27/61 (44%), Gaps = 11/61 (18%)
Query: 202 WHLEAPTCARRAVPAVPAAQPRGRAQRAPAARRQVPGGPACQGQDGRRPALGRPRPRCAP 261
W AP C R PA+ AA+P GR A RR C +D PA R R C P
Sbjct: 73 WPCGAPACTRTLSPAL-AARPAGRGPCAGRPRR-------CGCRD---PADSRARGCCQP 121
Query: 262 Q 262
Q
Sbjct: 122 Q 122
Score = 29.3 bits (64), Expect = 4.1
Identities = 25/95 (26%), Positives = 37/95 (38%), Gaps = 7/95 (7%)
Query: 74 QTLADAVASSPKGRGLCCARRSPPKRCFA---GHNSLEPLLTGRSLPRPLAHGEEPHYPF 130
+TL+ A+A+ P GRG C R P+RC + + L PL G+ P
Sbjct: 82 RTLSPALAARPAGRGPCAGR---PRRCGCRDPADSRARGCCQPQRLDVPLRLGQAPLRAG 138
Query: 131 GRRGTPPDVRTS-NSGAPTASAARPPCSITTKNCC 164
R G R + +P R + +CC
Sbjct: 139 TRSGAQDCARRDLPAPSPLQGRLRAASQYSRSSCC 173
>gi|239748836 PREDICTED: hypothetical protein XP_002346833 [Homo
sapiens]
Length = 175
Score = 31.2 bits (69), Expect = 1.1
Identities = 24/61 (39%), Positives = 27/61 (44%), Gaps = 11/61 (18%)
Query: 202 WHLEAPTCARRAVPAVPAAQPRGRAQRAPAARRQVPGGPACQGQDGRRPALGRPRPRCAP 261
W AP C R PA+ AA+P GR A RR C +D PA R R C P
Sbjct: 73 WPCGAPACTRTLSPAL-AARPAGRGPCAGRPRR-------CGCRD---PADSRARGCCQP 121
Query: 262 Q 262
Q
Sbjct: 122 Q 122
Score = 29.3 bits (64), Expect = 4.1
Identities = 25/95 (26%), Positives = 37/95 (38%), Gaps = 7/95 (7%)
Query: 74 QTLADAVASSPKGRGLCCARRSPPKRCFA---GHNSLEPLLTGRSLPRPLAHGEEPHYPF 130
+TL+ A+A+ P GRG C R P+RC + + L PL G+ P
Sbjct: 82 RTLSPALAARPAGRGPCAGR---PRRCGCRDPADSRARGCCQPQRLDVPLRLGQAPLRAG 138
Query: 131 GRRGTPPDVRTS-NSGAPTASAARPPCSITTKNCC 164
R G R + +P R + +CC
Sbjct: 139 TRSGAQDCARRDLPAPSPLQGRLRAASQYSRSSCC 173
>gi|239742863 PREDICTED: hypothetical protein XP_002342665 [Homo
sapiens]
Length = 175
Score = 31.2 bits (69), Expect = 1.1
Identities = 24/61 (39%), Positives = 27/61 (44%), Gaps = 11/61 (18%)
Query: 202 WHLEAPTCARRAVPAVPAAQPRGRAQRAPAARRQVPGGPACQGQDGRRPALGRPRPRCAP 261
W AP C R PA+ AA+P GR A RR C +D PA R R C P
Sbjct: 73 WPCGAPACTRTLSPAL-AARPAGRGPCAGRPRR-------CGCRD---PADSRARGCCQP 121
Query: 262 Q 262
Q
Sbjct: 122 Q 122
Score = 29.3 bits (64), Expect = 4.1
Identities = 25/95 (26%), Positives = 37/95 (38%), Gaps = 7/95 (7%)
Query: 74 QTLADAVASSPKGRGLCCARRSPPKRCFA---GHNSLEPLLTGRSLPRPLAHGEEPHYPF 130
+TL+ A+A+ P GRG C R P+RC + + L PL G+ P
Sbjct: 82 RTLSPALAARPAGRGPCAGR---PRRCGCRDPADSRARGCCQPQRLDVPLRLGQAPLRAG 138
Query: 131 GRRGTPPDVRTS-NSGAPTASAARPPCSITTKNCC 164
R G R + +P R + +CC
Sbjct: 139 TRSGAQDCARRDLPAPSPLQGRLRAASQYSRSSCC 173
>gi|56549117 dynamin 1 isoform 2 [Homo sapiens]
Length = 851
Score = 31.2 bits (69), Expect = 1.1
Identities = 22/55 (40%), Positives = 27/55 (49%), Gaps = 3/55 (5%)
Query: 206 APTCARRAVPAVPAAQP--RGRAQRAPAARRQVPGGPACQGQDGRRPALGRPRPR 258
+PT RRA PAVP A+P RG A P A + G P + G P P P+
Sbjct: 778 SPTPQRRA-PAVPPARPGSRGPAPGPPPAGSALGGAPPVPSRPGASPDPFGPPPQ 831
>gi|59853099 dynamin 1 isoform 1 [Homo sapiens]
Length = 864
Score = 31.2 bits (69), Expect = 1.1
Identities = 22/55 (40%), Positives = 27/55 (49%), Gaps = 3/55 (5%)
Query: 206 APTCARRAVPAVPAAQP--RGRAQRAPAARRQVPGGPACQGQDGRRPALGRPRPR 258
+PT RRA PAVP A+P RG A P A + G P + G P P P+
Sbjct: 778 SPTPQRRA-PAVPPARPGSRGPAPGPPPAGSALGGAPPVPSRPGASPDPFGPPPQ 831
>gi|95007020 transmembrane protein 70 isoform b [Homo sapiens]
Length = 107
Score = 31.2 bits (69), Expect = 1.1
Identities = 23/69 (33%), Positives = 26/69 (37%), Gaps = 4/69 (5%)
Query: 202 WHLEAPTCARRAVPAVPAAQPRGRAQRAPAARRQVPGGPAC---QGQDGRRPALGRPRPR 258
W +E P C RR AA RA + A+ P GP G G L RP R
Sbjct: 10 WAVELPLCGRRTALCAAAALRGPRASVSRASSSSGPSGPVAGWSTGPSGAARLLRRP-GR 68
Query: 259 CAPQVAWAG 267
V W G
Sbjct: 69 AQIPVYWEG 77
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.131 0.423
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,275,110
Number of Sequences: 37866
Number of extensions: 737600
Number of successful extensions: 3715
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 103
Number of HSP's that attempted gapping in prelim test: 3520
Number of HSP's gapped (non-prelim): 301
length of query: 283
length of database: 18,247,518
effective HSP length: 101
effective length of query: 182
effective length of database: 14,423,052
effective search space: 2624995464
effective search space used: 2624995464
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.