BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|116256487 patatin-like phospholipase domain containing 6
[Homo sapiens]
(1327 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|116256487 patatin-like phospholipase domain containing 6 [Hom... 2648 0.0
gi|148727335 patatin-like phospholipase domain containing 7 isof... 1553 0.0
gi|148727290 patatin-like phospholipase domain containing 7 isof... 1551 0.0
gi|38257139 protein kinase, cAMP-dependent, regulatory, type I, ... 49 2e-05
gi|47132583 cAMP-dependent protein kinase, regulatory subunit al... 48 5e-05
gi|47132581 cAMP-dependent protein kinase, regulatory subunit al... 48 5e-05
gi|4506063 cAMP-dependent protein kinase, regulatory subunit alp... 48 5e-05
gi|155030206 Rap guanine nucleotide exchange factor (GEF) 4 isof... 47 1e-04
gi|155030204 Rap guanine nucleotide exchange factor (GEF) 4 isof... 47 1e-04
gi|47132585 cAMP-dependent protein kinase, regulatory subunit be... 47 1e-04
gi|117938768 GNAS complex locus alex [Homo sapiens] 47 2e-04
gi|148747862 Rap guanine nucleotide exchange factor 3 isoform b ... 45 5e-04
gi|20070215 Rap guanine nucleotide exchange factor 3 isoform b [... 45 5e-04
gi|148747859 Rap guanine nucleotide exchange factor 3 isoform a ... 45 5e-04
gi|42718011 cyclic nucleotide gated channel alpha 2 [Homo sapiens] 42 0.003
gi|33286446 opioid growth factor receptor [Homo sapiens] 42 0.005
gi|217035093 cyclic nucleotide gated channel alpha 1 isoform 1 [... 41 0.007
gi|71143141 cyclic nucleotide gated channel alpha 1 isoform 2 [H... 41 0.007
gi|4758958 cAMP-dependent protein kinase, regulatory subunit alp... 41 0.007
gi|116256354 alpha 2 type IV collagen preproprotein [Homo sapiens] 41 0.009
gi|120433600 cyclic nucleotide gated channel alpha 3 isoform 2 [... 40 0.011
gi|4502917 cyclic nucleotide gated channel alpha 3 isoform 1 [Ho... 40 0.011
gi|72004269 tetra-peptide repeat homeobox [Homo sapiens] 40 0.015
gi|114205399 cyclic nucleotide gated channel beta 1 isoform a [H... 40 0.019
gi|116089335 BR serine/threonine kinase 2 [Homo sapiens] 39 0.033
gi|156071470 hyperpolarization activated cyclic nucleotide-gated... 38 0.057
gi|145309322 insulinoma-associated protein IA-6 [Homo sapiens] 38 0.057
gi|24431935 reticulon 4 isoform A [Homo sapiens] 37 0.096
gi|197245373 proline rich 22 isoform 1 [Homo sapiens] 37 0.13
gi|23503299 proline rich 22 isoform 2 [Homo sapiens] 37 0.13
>gi|116256487 patatin-like phospholipase domain containing 6 [Homo
sapiens]
Length = 1327
Score = 2648 bits (6863), Expect = 0.0
Identities = 1327/1327 (100%), Positives = 1327/1327 (100%)
Query: 1 MEAPLQTGMVLGVMIGAGVAVVVTAVLILLVVRRLRVPKTPAPDGPRYRFRKRDKVLFYG 60
MEAPLQTGMVLGVMIGAGVAVVVTAVLILLVVRRLRVPKTPAPDGPRYRFRKRDKVLFYG
Sbjct: 1 MEAPLQTGMVLGVMIGAGVAVVVTAVLILLVVRRLRVPKTPAPDGPRYRFRKRDKVLFYG 60
Query: 61 RKIMRKVSQSTSSLVDTSVSATSRPRMRKKLKMLNIAKKILRIQKETPTLQRKEPPPAVL 120
RKIMRKVSQSTSSLVDTSVSATSRPRMRKKLKMLNIAKKILRIQKETPTLQRKEPPPAVL
Sbjct: 61 RKIMRKVSQSTSSLVDTSVSATSRPRMRKKLKMLNIAKKILRIQKETPTLQRKEPPPAVL 120
Query: 121 EADLTEGDLANSHLPSEVLYMLKNVRVLGHFEKPLFLELCRHMVFQRLGQGDYVFRPGQP 180
EADLTEGDLANSHLPSEVLYMLKNVRVLGHFEKPLFLELCRHMVFQRLGQGDYVFRPGQP
Sbjct: 121 EADLTEGDLANSHLPSEVLYMLKNVRVLGHFEKPLFLELCRHMVFQRLGQGDYVFRPGQP 180
Query: 181 DASIYVVQDGLLELCLPGPDGKECVVKEVVPGDSVNSLLSILDVITGHQHPQRTVSARAA 240
DASIYVVQDGLLELCLPGPDGKECVVKEVVPGDSVNSLLSILDVITGHQHPQRTVSARAA
Sbjct: 181 DASIYVVQDGLLELCLPGPDGKECVVKEVVPGDSVNSLLSILDVITGHQHPQRTVSARAA 240
Query: 241 RDSTVLRLPVEAFSAVFTKYPESLVRVVQIIMVRLQRVTFLALHNYLGLTNELFSHEIQP 300
RDSTVLRLPVEAFSAVFTKYPESLVRVVQIIMVRLQRVTFLALHNYLGLTNELFSHEIQP
Sbjct: 241 RDSTVLRLPVEAFSAVFTKYPESLVRVVQIIMVRLQRVTFLALHNYLGLTNELFSHEIQP 300
Query: 301 LRLFPSPGLPTRTSPVRGSKRMVSTSATDEPRETPGRPPDPTGAPLPGPTGDPVKPTSLE 360
LRLFPSPGLPTRTSPVRGSKRMVSTSATDEPRETPGRPPDPTGAPLPGPTGDPVKPTSLE
Sbjct: 301 LRLFPSPGLPTRTSPVRGSKRMVSTSATDEPRETPGRPPDPTGAPLPGPTGDPVKPTSLE 360
Query: 361 TPSAPLLSRCVSMPGDISGLQGGPRSDFDMAYERGRISVSLQEEASGGSLAAPARTPTQE 420
TPSAPLLSRCVSMPGDISGLQGGPRSDFDMAYERGRISVSLQEEASGGSLAAPARTPTQE
Sbjct: 361 TPSAPLLSRCVSMPGDISGLQGGPRSDFDMAYERGRISVSLQEEASGGSLAAPARTPTQE 420
Query: 421 PREQPAGACEYSYCEDESATGGCPFGPYQGRQTSSIFEAAKQELAKLMRIEDPSLLNSRV 480
PREQPAGACEYSYCEDESATGGCPFGPYQGRQTSSIFEAAKQELAKLMRIEDPSLLNSRV
Sbjct: 421 PREQPAGACEYSYCEDESATGGCPFGPYQGRQTSSIFEAAKQELAKLMRIEDPSLLNSRV 480
Query: 481 LLHHAKAGTIIARQGDQDVSLHFVLWGCLHVYQRMIDKAEDVCLFVAQPGELVGQLAVLT 540
LLHHAKAGTIIARQGDQDVSLHFVLWGCLHVYQRMIDKAEDVCLFVAQPGELVGQLAVLT
Sbjct: 481 LLHHAKAGTIIARQGDQDVSLHFVLWGCLHVYQRMIDKAEDVCLFVAQPGELVGQLAVLT 540
Query: 541 GEPLIFTLRAQRDCTFLRISKSDFYEIMRAQPSVVLSAAHTVAARMSPFVRQMDFAIDWT 600
GEPLIFTLRAQRDCTFLRISKSDFYEIMRAQPSVVLSAAHTVAARMSPFVRQMDFAIDWT
Sbjct: 541 GEPLIFTLRAQRDCTFLRISKSDFYEIMRAQPSVVLSAAHTVAARMSPFVRQMDFAIDWT 600
Query: 601 AVEAGRALYRQGDRSDCTYIVLNGRLRSVIQRGSGKKELVGEYGRGDLIGVVEALTRQPR 660
AVEAGRALYRQGDRSDCTYIVLNGRLRSVIQRGSGKKELVGEYGRGDLIGVVEALTRQPR
Sbjct: 601 AVEAGRALYRQGDRSDCTYIVLNGRLRSVIQRGSGKKELVGEYGRGDLIGVVEALTRQPR 660
Query: 661 ATTVHAVRDTELAKLPEGTLGHIKRRYPQVVTRLIHLLSQKILGNLQQLQGPFPAGSGLG 720
ATTVHAVRDTELAKLPEGTLGHIKRRYPQVVTRLIHLLSQKILGNLQQLQGPFPAGSGLG
Sbjct: 661 ATTVHAVRDTELAKLPEGTLGHIKRRYPQVVTRLIHLLSQKILGNLQQLQGPFPAGSGLG 720
Query: 721 VPPHSELTNPASNLATVAILPVCAEVPMVAFTLELQHALQAIGPTLLLNSDIIRARLGAS 780
VPPHSELTNPASNLATVAILPVCAEVPMVAFTLELQHALQAIGPTLLLNSDIIRARLGAS
Sbjct: 721 VPPHSELTNPASNLATVAILPVCAEVPMVAFTLELQHALQAIGPTLLLNSDIIRARLGAS 780
Query: 781 ALDSIQEFRLSGWLAQQEDAHRIVLYQTDASLTPWTVRCLRQADCILIVGLGDQEPTLGQ 840
ALDSIQEFRLSGWLAQQEDAHRIVLYQTDASLTPWTVRCLRQADCILIVGLGDQEPTLGQ
Sbjct: 781 ALDSIQEFRLSGWLAQQEDAHRIVLYQTDASLTPWTVRCLRQADCILIVGLGDQEPTLGQ 840
Query: 841 LEQMLENTAVRALKQLVLLHREEGAGPTRTVEWLNMRSWCSGHLHLRCPRRLFSRRSPAK 900
LEQMLENTAVRALKQLVLLHREEGAGPTRTVEWLNMRSWCSGHLHLRCPRRLFSRRSPAK
Sbjct: 841 LEQMLENTAVRALKQLVLLHREEGAGPTRTVEWLNMRSWCSGHLHLRCPRRLFSRRSPAK 900
Query: 901 LHELYEKVFSRRADRHSDFSRLARVLTGNTIALVLGGGGARGCSHIGVLKALEEAGVPVD 960
LHELYEKVFSRRADRHSDFSRLARVLTGNTIALVLGGGGARGCSHIGVLKALEEAGVPVD
Sbjct: 901 LHELYEKVFSRRADRHSDFSRLARVLTGNTIALVLGGGGARGCSHIGVLKALEEAGVPVD 960
Query: 961 LVGGTSIGSFIGALYAEERSASRTKQRAREWAKSMTSVLEPVLDLTYPVTSMFTGSAFNR 1020
LVGGTSIGSFIGALYAEERSASRTKQRAREWAKSMTSVLEPVLDLTYPVTSMFTGSAFNR
Sbjct: 961 LVGGTSIGSFIGALYAEERSASRTKQRAREWAKSMTSVLEPVLDLTYPVTSMFTGSAFNR 1020
Query: 1021 SIHRVFQDKQIEDLWLPYFNVTTDITASAMRVHKDGSLWRYVRASMTLSGYLPPLCDPKD 1080
SIHRVFQDKQIEDLWLPYFNVTTDITASAMRVHKDGSLWRYVRASMTLSGYLPPLCDPKD
Sbjct: 1021 SIHRVFQDKQIEDLWLPYFNVTTDITASAMRVHKDGSLWRYVRASMTLSGYLPPLCDPKD 1080
Query: 1081 GHLLMDGGYINNLPADIARSMGAKTVIAIDVGSQDETDLSTYGDSLSGWWLLWKRLNPWA 1140
GHLLMDGGYINNLPADIARSMGAKTVIAIDVGSQDETDLSTYGDSLSGWWLLWKRLNPWA
Sbjct: 1081 GHLLMDGGYINNLPADIARSMGAKTVIAIDVGSQDETDLSTYGDSLSGWWLLWKRLNPWA 1140
Query: 1141 DKVKVPDMAEIQSRLAYVSCVRQLEVVKSSSYCEYLRPPIDCFKTMDFGKFDQIYDVGYQ 1200
DKVKVPDMAEIQSRLAYVSCVRQLEVVKSSSYCEYLRPPIDCFKTMDFGKFDQIYDVGYQ
Sbjct: 1141 DKVKVPDMAEIQSRLAYVSCVRQLEVVKSSSYCEYLRPPIDCFKTMDFGKFDQIYDVGYQ 1200
Query: 1201 YGKAVFGGWSRGNVIEKMLTDRRSTDLNESRRADVLAFPSSGFTDLAEIVSRIEPPTSYV 1260
YGKAVFGGWSRGNVIEKMLTDRRSTDLNESRRADVLAFPSSGFTDLAEIVSRIEPPTSYV
Sbjct: 1201 YGKAVFGGWSRGNVIEKMLTDRRSTDLNESRRADVLAFPSSGFTDLAEIVSRIEPPTSYV 1260
Query: 1261 SDGCADGEESDCLTEYEEDAGPDCSRDEGGSPEGASPSTASEMEEEKSILRQRRCLPQEP 1320
SDGCADGEESDCLTEYEEDAGPDCSRDEGGSPEGASPSTASEMEEEKSILRQRRCLPQEP
Sbjct: 1261 SDGCADGEESDCLTEYEEDAGPDCSRDEGGSPEGASPSTASEMEEEKSILRQRRCLPQEP 1320
Query: 1321 PGSATDA 1327
PGSATDA
Sbjct: 1321 PGSATDA 1327
>gi|148727335 patatin-like phospholipase domain containing 7 isoform a
[Homo sapiens]
Length = 1342
Score = 1553 bits (4020), Expect = 0.0
Identities = 823/1335 (61%), Positives = 998/1335 (74%), Gaps = 50/1335 (3%)
Query: 9 MVLGVMIGAGVAVVVTAVLILLVVRRLRVPKTPAPDGPRYRFRKRDKVLFYGRKIMRKVS 68
M+ G+ +GA +A+ + VLIL + RRLR + P P+YRFRKRDKV+FYGRKIMRKV+
Sbjct: 35 MLTGIAVGALLALALVGVLILFMFRRLRQFRQAQPT-PQYRFRKRDKVMFYGRKIMRKVT 93
Query: 69 QSTSSLVDTSVSATSRPRMRKKLKMLNIAKKILRIQKETPTLQRKEPPPAVLEADLTEGD 128
++LV+ + A R R RK+ K+L++AK+ILR +KE P LQ KEPPP++LEADLTE D
Sbjct: 94 TLPNTLVENT--ALPRQRARKRTKVLSLAKRILRFKKEYPALQPKEPPPSLLEADLTEFD 151
Query: 129 LANSHLPSEVLYMLKNVRVLGHFEKPLFLELCRHMVFQRLGQGDYVFRPGQPDASIYVVQ 188
+ NSHLPSEVLYMLKNVRVLGHFEKPLFLELC+H+VF +L +G++VF+P +PD SI VVQ
Sbjct: 152 VKNSHLPSEVLYMLKNVRVLGHFEKPLFLELCKHIVFVQLQEGEHVFQPREPDPSICVVQ 211
Query: 189 DGLLELCLPGPDGKECVVKEVVPGDSVNSLLSILDVITGHQHPQRTVSARAARDSTVLRL 248
DG LE+C+ DG E VVKEV+ GDSV+SLLSILD+ITGH P +TVS RAA ST+LRL
Sbjct: 212 DGRLEVCIQDTDGTEVVVKEVLAGDSVHSLLSILDIITGHAAPYKTVSVRAAIPSTILRL 271
Query: 249 PVEAFSAVFTKYPESLVRVVQIIMVRLQRVTFLALHNYLGLTNELFSHEIQPLRLFPSPG 308
P AF VF KYPE+LVRVVQIIMVRLQRVTFLALHNYLGLT ELF+ E Q + L
Sbjct: 272 PAAAFHGVFEKYPETLVRVVQIIMVRLQRVTFLALHNYLGLTTELFNAESQAIPLV---- 327
Query: 309 LPTRTSPVRGSKRMVSTSATDEPRETPGRPPDPT----GAPLPGPTGDPVKPTSLETPSA 364
+ S G + +E + P R + G P G P+ S P+
Sbjct: 328 --SVASVAAGKAKKQVFYGEEERLKKPPRLQESCDSDHGGGRPAAAG-PLLKRSHSVPAP 384
Query: 365 PLLSRCVS---MPG----DISGLQGGP---RSDFDMAYERGRISVSLQEEASGGSLAAPA 414
+ + + PG D S QGGP SD MA +R R+ + +E G S+A+ +
Sbjct: 385 SIRKQILEELEKPGAGDPDPSAPQGGPGSATSDLGMACDRARVFLH-SDEHPGSSVASKS 443
Query: 415 RTPTQEPREQPAGACEYSYCEDESATGGCPFGPYQGRQTSSIFEAAKQELAKLMRIEDPS 474
R E P+ ++S + R++ +IF AAK++L LM++ED S
Sbjct: 444 RKSVMVA-EIPSTVSQHSESHTDETLAS--------RKSDAIFRAAKKDLLTLMKLEDSS 494
Query: 475 LLNSRVLLHHAKAGTIIARQGDQDVSLHFVLWGCLHVYQRMIDKAEDVCLFVAQPGELVG 534
LL+ RV L H AGT+++RQGDQD S+ FV+ G LHVYQR I ED CLF+ +PGE+VG
Sbjct: 495 LLDGRVALLHVPAGTVVSRQGDQDASILFVVSGLLHVYQRKIGSQEDTCLFLTRPGEMVG 554
Query: 535 QLAVLTGEPLIFTLRAQRDCTFLRISKSDFYEIMRAQPSVVLSAAHTVAARMSPFVRQMD 594
QLAVLTGEPLIFT++A RDC+FL ISK+ FYEIMR QP+VVL AHTV RMS FVRQ+D
Sbjct: 555 QLAVLTGEPLIFTVKANRDCSFLSISKAHFYEIMRKQPTVVLGVAHTVVKRMSSFVRQID 614
Query: 595 FAIDWTAVEAGRALYRQGDRSDCTYIVLNGRLRSVIQRGSGKKELVGEYGRGDLIGVVEA 654
FA+DW VEAGRA+YRQGD+SDCTYI+L+GRLRSVI++ GKK L GEYGRGDL+GVVE
Sbjct: 615 FALDWVEVEAGRAIYRQGDKSDCTYIMLSGRLRSVIRKDDGKKRLAGEYGRGDLVGVVET 674
Query: 655 LTRQPRATTVHAVRDTELAKLPEGTLGHIKRRYPQVVTRLIHLLSQKILGNLQQLQGPFP 714
LT Q RATTVHAVRD+ELAKLP G L IKRRYPQVVTRLIHLL +KILG+LQQ GP
Sbjct: 675 LTHQARATTVHAVRDSELAKLPAGALTSIKRRYPQVVTRLIHLLGEKILGSLQQ--GPV- 731
Query: 715 AGSGLGVPPHS---ELTNPASNLATVAILPVCAEVPMVAFTLELQHALQAIGPTLLLNSD 771
G LG+P +L NPA NL+TVA++PV EVP+ AF LEL+HAL AIGPTLLL SD
Sbjct: 732 TGHQLGLPTEGSKWDLGNPAVNLSTVAVMPVSEEVPLTAFALELEHALSAIGPTLLLTSD 791
Query: 772 IIRARLGASALDSIQEFRLSGWLAQQEDAHRIVLYQTDASLTPWTVRCLRQADCILIVGL 831
I+ RLG++ALDS+ E+RLS WL QQED HRIVLYQ D +LTPWT RC+RQADCILIVGL
Sbjct: 792 NIKRRLGSAALDSVHEYRLSSWLGQQEDTHRIVLYQVDGTLTPWTQRCVRQADCILIVGL 851
Query: 832 GDQEPTLGQLEQMLENTAVRALKQLVLLHREEGAGPTRTVEWLNMRSWCSGHLHLRCPRR 891
GDQEPT+G+LE+MLE+TAVRA KQL+LLHREEG P RTVEWLNMRSWCSGHLHL CPRR
Sbjct: 852 GDQEPTVGELERMLESTAVRAQKQLILLHREEGPAPARTVEWLNMRSWCSGHLHLCCPRR 911
Query: 892 LFSRRSPAKLHELYEKVFSRRADRHSDFSRLARVLTGNTIALVLGGGGARGCSHIGVLKA 951
+FSRRS KL E+Y+ VF R DRHSDFSRLARVLTGN IALVLGGGGARGC+ +GVLKA
Sbjct: 912 VFSRRSLPKLVEMYKHVFQRPPDRHSDFSRLARVLTGNAIALVLGGGGARGCAQVGVLKA 971
Query: 952 LEEAGVPVDLVGGTSIGSFIGALYAEERSASRTKQRAREWAKSMTSVLEPVLDLTYPVTS 1011
L E G+PVD+VGGTSIG+F+GALY+EER+ S+ + RA++WA+ MTS+++ LDLTYP+TS
Sbjct: 972 LAECGIPVDMVGGTSIGAFVGALYSEERNYSQMRIRAKQWAEGMTSLMKAALDLTYPITS 1031
Query: 1012 MFTGSAFNRSIHRVFQDKQIEDLWLPYFNVTTDITASAMRVHKDGSLWRYVRASMTLSGY 1071
MF+G+ FN SI VF+D+QIEDLW+PYF +TTDITASAMRVH DGSLW YVRASM+LSGY
Sbjct: 1032 MFSGAGFNSSIFSVFKDQQIEDLWIPYFAITTDITASAMRVHTDGSLWWYVRASMSLSGY 1091
Query: 1072 LPPLCDPKDGHLLMDGGYINNLPADIARSMGAKTVIAIDVGSQDETDLSTYGDSLSGWWL 1131
+PPLCDPKDGHLLMDGGYINNLPAD+ARSMGAK VIAIDVGS+DETDL+ YGD+LSGWWL
Sbjct: 1092 MPPLCDPKDGHLLMDGGYINNLPADVARSMGAKVVIAIDVGSRDETDLTNYGDALSGWWL 1151
Query: 1132 LWKRLNPWADKVKVPDMAEIQSRLAYVSCVRQLEVVKSSSYCEYLRPPIDCFKTMDFGKF 1191
LWKR NP A KVKV +MAEIQ+RLAYV CVRQLEVVKSS YCEYLRPPID + T+DFGKF
Sbjct: 1152 LWKRWNPLATKVKVLNMAEIQTRLAYVCCVRQLEVVKSSDYCEYLRPPIDSYSTLDFGKF 1211
Query: 1192 DQIYDVGYQYGKAVFGGWSRGNVIEKMLTDRRSTDLNESRRADVLAFPSSGFTDLAEIVS 1251
++I +VGYQ+G+ VF W R V+EKML D++ ++ + VL P++ FTDLAEIVS
Sbjct: 1212 NEICEVGYQHGRTVFDIWGRSGVLEKMLRDQQGP--SKKPASAVLTCPNASFTDLAEIVS 1269
Query: 1252 RIEPPTSYVSDGCADGEESDCLTEYEEDAGPDCSRDEGGSPEGASPSTASEMEEEKSILR 1311
RIEP + D +ESD TEYEE+ D RD + S S++E+E S+
Sbjct: 1270 RIEPAKPAMVD-----DESDYQTEYEEEL-LDVPRDAYADFQSTSAQQGSDLEDESSLRH 1323
Query: 1312 QRRCL--PQEPPGSA 1324
+ L P+ GS+
Sbjct: 1324 RHPSLAFPKLSEGSS 1338
>gi|148727290 patatin-like phospholipase domain containing 7 isoform b
[Homo sapiens]
Length = 1317
Score = 1551 bits (4015), Expect = 0.0
Identities = 822/1332 (61%), Positives = 996/1332 (74%), Gaps = 50/1332 (3%)
Query: 12 GVMIGAGVAVVVTAVLILLVVRRLRVPKTPAPDGPRYRFRKRDKVLFYGRKIMRKVSQST 71
G+ +GA +A+ + VLIL + RRLR + P P+YRFRKRDKV+FYGRKIMRKV+
Sbjct: 13 GIAVGALLALALVGVLILFMFRRLRQFRQAQPT-PQYRFRKRDKVMFYGRKIMRKVTTLP 71
Query: 72 SSLVDTSVSATSRPRMRKKLKMLNIAKKILRIQKETPTLQRKEPPPAVLEADLTEGDLAN 131
++LV+ + A R R RK+ K+L++AK+ILR +KE P LQ KEPPP++LEADLTE D+ N
Sbjct: 72 NTLVENT--ALPRQRARKRTKVLSLAKRILRFKKEYPALQPKEPPPSLLEADLTEFDVKN 129
Query: 132 SHLPSEVLYMLKNVRVLGHFEKPLFLELCRHMVFQRLGQGDYVFRPGQPDASIYVVQDGL 191
SHLPSEVLYMLKNVRVLGHFEKPLFLELC+H+VF +L +G++VF+P +PD SI VVQDG
Sbjct: 130 SHLPSEVLYMLKNVRVLGHFEKPLFLELCKHIVFVQLQEGEHVFQPREPDPSICVVQDGR 189
Query: 192 LELCLPGPDGKECVVKEVVPGDSVNSLLSILDVITGHQHPQRTVSARAARDSTVLRLPVE 251
LE+C+ DG E VVKEV+ GDSV+SLLSILD+ITGH P +TVS RAA ST+LRLP
Sbjct: 190 LEVCIQDTDGTEVVVKEVLAGDSVHSLLSILDIITGHAAPYKTVSVRAAIPSTILRLPAA 249
Query: 252 AFSAVFTKYPESLVRVVQIIMVRLQRVTFLALHNYLGLTNELFSHEIQPLRLFPSPGLPT 311
AF VF KYPE+LVRVVQIIMVRLQRVTFLALHNYLGLT ELF+ E Q + L +
Sbjct: 250 AFHGVFEKYPETLVRVVQIIMVRLQRVTFLALHNYLGLTTELFNAESQAIPLV------S 303
Query: 312 RTSPVRGSKRMVSTSATDEPRETPGRPPDPT----GAPLPGPTGDPVKPTSLETPSAPLL 367
S G + +E + P R + G P G P+ S P+ +
Sbjct: 304 VASVAAGKAKKQVFYGEEERLKKPPRLQESCDSDHGGGRPAAAG-PLLKRSHSVPAPSIR 362
Query: 368 SRCVS---MPG----DISGLQGGP---RSDFDMAYERGRISVSLQEEASGGSLAAPARTP 417
+ + PG D S QGGP SD MA +R R+ + +E G S+A+ +R
Sbjct: 363 KQILEELEKPGAGDPDPSAPQGGPGSATSDLGMACDRARVFLH-SDEHPGSSVASKSRKS 421
Query: 418 TQEPREQPAGACEYSYCEDESATGGCPFGPYQGRQTSSIFEAAKQELAKLMRIEDPSLLN 477
E P+ ++S + R++ +IF AAK++L LM++ED SLL+
Sbjct: 422 VMVA-EIPSTVSQHSESHTDETLAS--------RKSDAIFRAAKKDLLTLMKLEDSSLLD 472
Query: 478 SRVLLHHAKAGTIIARQGDQDVSLHFVLWGCLHVYQRMIDKAEDVCLFVAQPGELVGQLA 537
RV L H AGT+++RQGDQD S+ FV+ G LHVYQR I ED CLF+ +PGE+VGQLA
Sbjct: 473 GRVALLHVPAGTVVSRQGDQDASILFVVSGLLHVYQRKIGSQEDTCLFLTRPGEMVGQLA 532
Query: 538 VLTGEPLIFTLRAQRDCTFLRISKSDFYEIMRAQPSVVLSAAHTVAARMSPFVRQMDFAI 597
VLTGEPLIFT++A RDC+FL ISK+ FYEIMR QP+VVL AHTV RMS FVRQ+DFA+
Sbjct: 533 VLTGEPLIFTVKANRDCSFLSISKAHFYEIMRKQPTVVLGVAHTVVKRMSSFVRQIDFAL 592
Query: 598 DWTAVEAGRALYRQGDRSDCTYIVLNGRLRSVIQRGSGKKELVGEYGRGDLIGVVEALTR 657
DW VEAGRA+YRQGD+SDCTYI+L+GRLRSVI++ GKK L GEYGRGDL+GVVE LT
Sbjct: 593 DWVEVEAGRAIYRQGDKSDCTYIMLSGRLRSVIRKDDGKKRLAGEYGRGDLVGVVETLTH 652
Query: 658 QPRATTVHAVRDTELAKLPEGTLGHIKRRYPQVVTRLIHLLSQKILGNLQQLQGPFPAGS 717
Q RATTVHAVRD+ELAKLP G L IKRRYPQVVTRLIHLL +KILG+LQQ GP G
Sbjct: 653 QARATTVHAVRDSELAKLPAGALTSIKRRYPQVVTRLIHLLGEKILGSLQQ--GPV-TGH 709
Query: 718 GLGVPPHS---ELTNPASNLATVAILPVCAEVPMVAFTLELQHALQAIGPTLLLNSDIIR 774
LG+P +L NPA NL+TVA++PV EVP+ AF LEL+HAL AIGPTLLL SD I+
Sbjct: 710 QLGLPTEGSKWDLGNPAVNLSTVAVMPVSEEVPLTAFALELEHALSAIGPTLLLTSDNIK 769
Query: 775 ARLGASALDSIQEFRLSGWLAQQEDAHRIVLYQTDASLTPWTVRCLRQADCILIVGLGDQ 834
RLG++ALDS+ E+RLS WL QQED HRIVLYQ D +LTPWT RC+RQADCILIVGLGDQ
Sbjct: 770 RRLGSAALDSVHEYRLSSWLGQQEDTHRIVLYQVDGTLTPWTQRCVRQADCILIVGLGDQ 829
Query: 835 EPTLGQLEQMLENTAVRALKQLVLLHREEGAGPTRTVEWLNMRSWCSGHLHLRCPRRLFS 894
EPT+G+LE+MLE+TAVRA KQL+LLHREEG P RTVEWLNMRSWCSGHLHL CPRR+FS
Sbjct: 830 EPTVGELERMLESTAVRAQKQLILLHREEGPAPARTVEWLNMRSWCSGHLHLCCPRRVFS 889
Query: 895 RRSPAKLHELYEKVFSRRADRHSDFSRLARVLTGNTIALVLGGGGARGCSHIGVLKALEE 954
RRS KL E+Y+ VF R DRHSDFSRLARVLTGN IALVLGGGGARGC+ +GVLKAL E
Sbjct: 890 RRSLPKLVEMYKHVFQRPPDRHSDFSRLARVLTGNAIALVLGGGGARGCAQVGVLKALAE 949
Query: 955 AGVPVDLVGGTSIGSFIGALYAEERSASRTKQRAREWAKSMTSVLEPVLDLTYPVTSMFT 1014
G+PVD+VGGTSIG+F+GALY+EER+ S+ + RA++WA+ MTS+++ LDLTYP+TSMF+
Sbjct: 950 CGIPVDMVGGTSIGAFVGALYSEERNYSQMRIRAKQWAEGMTSLMKAALDLTYPITSMFS 1009
Query: 1015 GSAFNRSIHRVFQDKQIEDLWLPYFNVTTDITASAMRVHKDGSLWRYVRASMTLSGYLPP 1074
G+ FN SI VF+D+QIEDLW+PYF +TTDITASAMRVH DGSLW YVRASM+LSGY+PP
Sbjct: 1010 GAGFNSSIFSVFKDQQIEDLWIPYFAITTDITASAMRVHTDGSLWWYVRASMSLSGYMPP 1069
Query: 1075 LCDPKDGHLLMDGGYINNLPADIARSMGAKTVIAIDVGSQDETDLSTYGDSLSGWWLLWK 1134
LCDPKDGHLLMDGGYINNLPAD+ARSMGAK VIAIDVGS+DETDL+ YGD+LSGWWLLWK
Sbjct: 1070 LCDPKDGHLLMDGGYINNLPADVARSMGAKVVIAIDVGSRDETDLTNYGDALSGWWLLWK 1129
Query: 1135 RLNPWADKVKVPDMAEIQSRLAYVSCVRQLEVVKSSSYCEYLRPPIDCFKTMDFGKFDQI 1194
R NP A KVKV +MAEIQ+RLAYV CVRQLEVVKSS YCEYLRPPID + T+DFGKF++I
Sbjct: 1130 RWNPLATKVKVLNMAEIQTRLAYVCCVRQLEVVKSSDYCEYLRPPIDSYSTLDFGKFNEI 1189
Query: 1195 YDVGYQYGKAVFGGWSRGNVIEKMLTDRRSTDLNESRRADVLAFPSSGFTDLAEIVSRIE 1254
+VGYQ+G+ VF W R V+EKML D++ ++ + VL P++ FTDLAEIVSRIE
Sbjct: 1190 CEVGYQHGRTVFDIWGRSGVLEKMLRDQQGP--SKKPASAVLTCPNASFTDLAEIVSRIE 1247
Query: 1255 PPTSYVSDGCADGEESDCLTEYEEDAGPDCSRDEGGSPEGASPSTASEMEEEKSILRQRR 1314
P + D +ESD TEYEE+ D RD + S S++E+E S+ +
Sbjct: 1248 PAKPAMVD-----DESDYQTEYEEEL-LDVPRDAYADFQSTSAQQGSDLEDESSLRHRHP 1301
Query: 1315 CL--PQEPPGSA 1324
L P+ GS+
Sbjct: 1302 SLAFPKLSEGSS 1313
>gi|38257139 protein kinase, cAMP-dependent, regulatory, type I,
beta [Homo sapiens]
Length = 381
Score = 49.3 bits (116), Expect = 2e-05
Identities = 63/285 (22%), Positives = 114/285 (40%), Gaps = 19/285 (6%)
Query: 402 QEEASGGSLAAPARTPTQEPREQPAGACEYSYCEDESATGGCPFGPYQGRQTSSIFEAAK 461
Q ++ ++ P + R + G Y E+++ + P + +++ +A
Sbjct: 74 QSDSHDEEVSPTPPNPVVKARRRRGGVSAEVYTEEDAVSYVRKVIPKDYKTMTALAKAIS 133
Query: 462 QEL--AKLMRIEDPSLLNSRVLLHHAKAGTIIARQGDQDVSLHFVLWGCLHVYQRMIDKA 519
+ + A L E + ++ + H AG + +QG++ + + V G + VY
Sbjct: 134 KNVLFAHLDDNERSDIFDAMFPVTHI-AGETVIQQGNEGDNFYVVDQGEVDVY------V 186
Query: 520 EDVCLFVAQPGELVGQLAVLTGEPLIFTLRAQRDCTFLRISKSDFYEIM-------RAQP 572
+ G G+LA++ G P T++A+ D I + + I+ R
Sbjct: 187 NGEWVTNISEGGSFGELALIYGTPRAATVKAKTDLKLWGIDRDSYRRILMGSTLRKRKMY 246
Query: 573 SVVLSAAHTVAARMSPFVRQMDFAIDWTAVEAGRALYRQGDRSDCTYIVLNGRLRSVIQR 632
LS + + + A++ E G + QG+ D YI+ G SV+QR
Sbjct: 247 EEFLSKVSILESLEKWERLTVADALEPVQFEDGEKIVVQGEPGDDFYIITEG-TASVLQR 305
Query: 633 GSGKKEL--VGEYGRGDLIGVVEALTRQPRATTVHAVRDTELAKL 675
S +E VG G D G + L +PRA TV A + KL
Sbjct: 306 RSPNEEYVEVGRLGPSDYFGEIALLLNRPRAATVVARGPLKCVKL 350
>gi|47132583 cAMP-dependent protein kinase, regulatory subunit alpha
1 [Homo sapiens]
Length = 381
Score = 48.1 bits (113), Expect = 5e-05
Identities = 49/199 (24%), Positives = 85/199 (42%), Gaps = 18/199 (9%)
Query: 487 AGTIIARQGDQDVSLHFVLWGCLHVYQRMIDKAEDVCLFVAQPGELVGQLAVLTGEPLIF 546
AG + +QGD+ + + + G VY + V + G G+LA++ G P
Sbjct: 160 AGETVIQQGDEGDNFYVIDQGETDVYVN-----NEWATSVGEGGSF-GELALIYGTPRAA 213
Query: 547 TLRAQRDCTFLRISKSDFYEIMRAQPSVVLSAAHTVAARMSPFVRQMD--------FAID 598
T++A+ + I + + I+ +++S + +D A++
Sbjct: 214 TVKAKTNVKLWGIDRDSYRRILMGSTLRKRKMYEEFLSKVS-ILESLDKWERLTVADALE 272
Query: 599 WTAVEAGRALYRQGDRSDCTYIVLNGRLRSVIQRGSGKKEL--VGEYGRGDLIGVVEALT 656
E G+ + QG+ D +I+L G +V+QR S +E VG G D G + L
Sbjct: 273 PVQFEDGQKIVVQGEPGDEFFIILEGS-AAVLQRRSENEEFVEVGRLGPSDYFGEIALLM 331
Query: 657 RQPRATTVHAVRDTELAKL 675
+PRA TV A + KL
Sbjct: 332 NRPRAATVVARGPLKCVKL 350
>gi|47132581 cAMP-dependent protein kinase, regulatory subunit alpha
1 [Homo sapiens]
Length = 381
Score = 48.1 bits (113), Expect = 5e-05
Identities = 49/199 (24%), Positives = 85/199 (42%), Gaps = 18/199 (9%)
Query: 487 AGTIIARQGDQDVSLHFVLWGCLHVYQRMIDKAEDVCLFVAQPGELVGQLAVLTGEPLIF 546
AG + +QGD+ + + + G VY + V + G G+LA++ G P
Sbjct: 160 AGETVIQQGDEGDNFYVIDQGETDVYVN-----NEWATSVGEGGSF-GELALIYGTPRAA 213
Query: 547 TLRAQRDCTFLRISKSDFYEIMRAQPSVVLSAAHTVAARMSPFVRQMD--------FAID 598
T++A+ + I + + I+ +++S + +D A++
Sbjct: 214 TVKAKTNVKLWGIDRDSYRRILMGSTLRKRKMYEEFLSKVS-ILESLDKWERLTVADALE 272
Query: 599 WTAVEAGRALYRQGDRSDCTYIVLNGRLRSVIQRGSGKKEL--VGEYGRGDLIGVVEALT 656
E G+ + QG+ D +I+L G +V+QR S +E VG G D G + L
Sbjct: 273 PVQFEDGQKIVVQGEPGDEFFIILEGS-AAVLQRRSENEEFVEVGRLGPSDYFGEIALLM 331
Query: 657 RQPRATTVHAVRDTELAKL 675
+PRA TV A + KL
Sbjct: 332 NRPRAATVVARGPLKCVKL 350
>gi|4506063 cAMP-dependent protein kinase, regulatory subunit alpha
1 [Homo sapiens]
Length = 381
Score = 48.1 bits (113), Expect = 5e-05
Identities = 49/199 (24%), Positives = 85/199 (42%), Gaps = 18/199 (9%)
Query: 487 AGTIIARQGDQDVSLHFVLWGCLHVYQRMIDKAEDVCLFVAQPGELVGQLAVLTGEPLIF 546
AG + +QGD+ + + + G VY + V + G G+LA++ G P
Sbjct: 160 AGETVIQQGDEGDNFYVIDQGETDVYVN-----NEWATSVGEGGSF-GELALIYGTPRAA 213
Query: 547 TLRAQRDCTFLRISKSDFYEIMRAQPSVVLSAAHTVAARMSPFVRQMD--------FAID 598
T++A+ + I + + I+ +++S + +D A++
Sbjct: 214 TVKAKTNVKLWGIDRDSYRRILMGSTLRKRKMYEEFLSKVS-ILESLDKWERLTVADALE 272
Query: 599 WTAVEAGRALYRQGDRSDCTYIVLNGRLRSVIQRGSGKKEL--VGEYGRGDLIGVVEALT 656
E G+ + QG+ D +I+L G +V+QR S +E VG G D G + L
Sbjct: 273 PVQFEDGQKIVVQGEPGDEFFIILEGS-AAVLQRRSENEEFVEVGRLGPSDYFGEIALLM 331
Query: 657 RQPRATTVHAVRDTELAKL 675
+PRA TV A + KL
Sbjct: 332 NRPRAATVVARGPLKCVKL 350
>gi|155030206 Rap guanine nucleotide exchange factor (GEF) 4 isoform
b [Homo sapiens]
Length = 867
Score = 47.0 bits (110), Expect = 1e-04
Identities = 37/127 (29%), Positives = 60/127 (47%), Gaps = 12/127 (9%)
Query: 450 GRQTSSIFEAAKQELAKLMRIEDPSLLNSRVLL------HHAKAGTIIARQGDQDVSLHF 503
G++T E +EL + + S R L HAK GT++ QG++ S +
Sbjct: 193 GQRTVDDLEIIYEELLHIKALSHLSTTVKRELAGVLIFESHAKGGTVLFNQGEEGTSWYI 252
Query: 504 VLWGCLHVYQRMIDKAEDVCLFVAQPGELVGQLAVLTGEPLIFTLRAQRD-CTFLRISKS 562
+L G ++V +I VC G+ G+LA++ P ++ + D C FLR+ K
Sbjct: 253 ILKGSVNV---VIYGKGVVC--TLHEGDDFGKLALVNDAPRAASIVLREDNCHFLRVDKE 307
Query: 563 DFYEIMR 569
DF I+R
Sbjct: 308 DFNRILR 314
>gi|155030204 Rap guanine nucleotide exchange factor (GEF) 4 isoform
a [Homo sapiens]
Length = 1011
Score = 47.0 bits (110), Expect = 1e-04
Identities = 37/127 (29%), Positives = 60/127 (47%), Gaps = 12/127 (9%)
Query: 450 GRQTSSIFEAAKQELAKLMRIEDPSLLNSRVLL------HHAKAGTIIARQGDQDVSLHF 503
G++T E +EL + + S R L HAK GT++ QG++ S +
Sbjct: 337 GQRTVDDLEIIYEELLHIKALSHLSTTVKRELAGVLIFESHAKGGTVLFNQGEEGTSWYI 396
Query: 504 VLWGCLHVYQRMIDKAEDVCLFVAQPGELVGQLAVLTGEPLIFTLRAQRD-CTFLRISKS 562
+L G ++V +I VC G+ G+LA++ P ++ + D C FLR+ K
Sbjct: 397 ILKGSVNV---VIYGKGVVC--TLHEGDDFGKLALVNDAPRAASIVLREDNCHFLRVDKE 451
Query: 563 DFYEIMR 569
DF I+R
Sbjct: 452 DFNRILR 458
Score = 32.7 bits (73), Expect = 2.4
Identities = 31/119 (26%), Positives = 49/119 (41%), Gaps = 6/119 (5%)
Query: 142 LKNVRVLGHFEKPLFLELCRHMVFQRLGQGDYVFRPGQPDASIYVVQDGLLELCLPGPDG 201
LK V+ F L ++C ++ L +G +FR G + Y V G L++ +
Sbjct: 38 LKEVKAFEKFHPNLLHQICLCGYYENLEKGITLFRQGDIGTNWYAVLAGSLDVKVSETSS 97
Query: 202 KECVVKEVVPGDSVNSLLSILDVITGHQHPQRTVSARAARDSTVLRLPVEAFSAVFTKY 260
+ V G SILD H T+ R S +LR+ + F A++ KY
Sbjct: 98 HQDAVTICTLGIGTAFGESILDNTPRH----ATIVTR--ESSELLRIEQKDFKALWEKY 150
Score = 31.6 bits (70), Expect = 5.3
Identities = 26/96 (27%), Positives = 40/96 (41%), Gaps = 3/96 (3%)
Query: 602 VEAGRALYRQGDRSDCTYIVLNGRLRSVIQRGSGKKELVG--EYGRGDLIGVVEALTRQP 659
+E G L+RQGD Y VL G L + S ++ V G G G L P
Sbjct: 64 LEKGITLFRQGDIGTNWYAVLAGSLDVKVSETSSHQDAVTICTLGIGTAFG-ESILDNTP 122
Query: 660 RATTVHAVRDTELAKLPEGTLGHIKRRYPQVVTRLI 695
R T+ +EL ++ + + +Y Q + L+
Sbjct: 123 RHATIVTRESSELLRIEQKDFKALWEKYRQYMAGLL 158
>gi|47132585 cAMP-dependent protein kinase, regulatory subunit beta
2 [Homo sapiens]
Length = 418
Score = 47.0 bits (110), Expect = 1e-04
Identities = 67/314 (21%), Positives = 118/314 (37%), Gaps = 25/314 (7%)
Query: 375 GDISGLQGG--PRSDFDMAYERGRI-SVSLQEEASGGSLAAPARTPTQEPREQPAGACEY 431
GD+ GG P + A E + S +EE + + A P + A C
Sbjct: 59 GDLGAAAGGGTPSKGVNFAEEPMQSDSEDGEEEEAAPADAGAFNAPVINRFTRRASVCAE 118
Query: 432 SYCEDESATGGCP--FGPYQGRQTSSIFEAAKQELA-KLMRIEDPSLLNSRVLLHHAKAG 488
+Y DE P Q + + EA K L K + E S + + K G
Sbjct: 119 AYNPDEEEDDAESRIIHPKTDDQRNRLQEACKDILLFKNLDPEQMSQVLDAMFEKLVKDG 178
Query: 489 TIIARQGDQDVSLHFVLWGCLHVYQRMIDKAEDVCLFVAQPGELVGQLAVLTGEPLIFTL 548
+ QGD + + + G +Y + C+ G+LA++ P T+
Sbjct: 179 EHVIDQGDDGDNFYVIDRGTFDIYVKCDGVGR--CVGNYDNRGSFGELALMYNTPRAATI 236
Query: 549 RAQRDCTFLRISKSDFYEIMRAQPSVVLSAAHTVAARMSPFVRQMDFAIDWTAVEA---- 604
A + + F I+ + + + PF++ ++F+ V+
Sbjct: 237 TATSPGALWGLDRVTFRRII-VKNNAKKRKMYESFIESLPFLKSLEFSERLKVVDVIGTK 295
Query: 605 ----GRALYRQGDRSDCTYIVLNGRLRSVIQRGSGKKEL-------VGEYGRGDLIGVVE 653
G + QGD +D +IV +G ++ ++R GK E+ + RG G +
Sbjct: 296 VYNDGEQIIAQGDSADSFFIVESGEVKITMKR-KGKSEVEENGAVEIARCSRGQYFGELA 354
Query: 654 ALTRQPRATTVHAV 667
+T +PRA + HA+
Sbjct: 355 LVTNKPRAASAHAI 368
>gi|117938768 GNAS complex locus alex [Homo sapiens]
Length = 626
Score = 46.6 bits (109), Expect = 2e-04
Identities = 28/79 (35%), Positives = 39/79 (49%), Gaps = 6/79 (7%)
Query: 299 QPLRLFP--SPGLPTRTSPVRGSKRMVSTSATDEPRETPGRPPDPTGAPLPGPTGDPVKP 356
QPL+ P +PG P + P G + + T +P TPG+P P P P G P+ P
Sbjct: 332 QPLQPQPILTPGQPQKI-PTPGQHQPILTPGHSQPIPTPGQPLPPQPIPTP---GRPLTP 387
Query: 357 TSLETPSAPLLSRCVSMPG 375
+ TP PL + + MPG
Sbjct: 388 QPIPTPGRPLTPQPIQMPG 406
Score = 33.1 bits (74), Expect = 1.8
Identities = 43/147 (29%), Positives = 55/147 (37%), Gaps = 34/147 (23%)
Query: 305 PSPGLPTRTSPVRGSKRMVSTSATDEPRETPGRPPDPTGAPLPG------------PTGD 352
P+PG P P+ R + T +P TPGRP P +PG G
Sbjct: 367 PTPGQPLPPQPIPTPGRPL----TPQPIPTPGRPLTPQPIQMPGRPLRLPPPLRLLRPGQ 422
Query: 353 PVKPTSLETPSAPLLSRCVSMPGD-------ISGLQGGP--RSDFDMAYERGRISVSLQE 403
P+ P +T P L + + PG + L GP RS D R R+ + L
Sbjct: 423 PMSPQLRQTQGLP-LPQPLLPPGQPKSAGRPLQPLPPGPDARSISDPPAPRSRLPIRLLR 481
Query: 404 EASGGSLAAPARTP-TQEPREQPAGAC 429
G L AR P PR A AC
Sbjct: 482 ----GLL---ARLPGGASPRAAAAAAC 501
>gi|148747862 Rap guanine nucleotide exchange factor 3 isoform b
[Homo sapiens]
Length = 881
Score = 45.1 bits (105), Expect = 5e-04
Identities = 32/120 (26%), Positives = 56/120 (46%), Gaps = 17/120 (14%)
Query: 451 RQTSSIFEAAKQELAKLMRIEDPSLLNSRVLLHHAKAGTIIARQGDQDVSLHFVLWGCLH 510
+ + + + K+ELA ++ E H+KAGT++ QGD+ S + + G ++
Sbjct: 202 KAVAHLSNSVKRELAAVLLFEP-----------HSKAGTVLFSQGDKGTSWYIIWKGSVN 250
Query: 511 VYQRMIDKAEDVCLFVAQPGELVGQLAVLTGEPLIFTLRAQRD-CTFLRISKSDFYEIMR 569
V + G+ GQLA++ P T+ + D C FLR+ K DF I++
Sbjct: 251 VVTH-----GKGLVTTLHEGDDFGQLALVNDAPRAATIILREDNCHFLRVDKQDFNRIIK 305
Score = 34.3 bits (77), Expect = 0.82
Identities = 21/62 (33%), Positives = 31/62 (50%), Gaps = 4/62 (6%)
Query: 603 EAGRALYRQGDRSDCTYIVLNGRLRSVIQRGSGKKELVGEYGRGDLIGVVEALTRQPRAT 662
+AG L+ QGD+ YI+ G + +V+ G G LV GD G + + PRA
Sbjct: 226 KAGTVLFSQGDKGTSWYIIWKGSV-NVVTHGKG---LVTTLHEGDDFGQLALVNDAPRAA 281
Query: 663 TV 664
T+
Sbjct: 282 TI 283
>gi|20070215 Rap guanine nucleotide exchange factor 3 isoform b
[Homo sapiens]
Length = 881
Score = 45.1 bits (105), Expect = 5e-04
Identities = 32/120 (26%), Positives = 56/120 (46%), Gaps = 17/120 (14%)
Query: 451 RQTSSIFEAAKQELAKLMRIEDPSLLNSRVLLHHAKAGTIIARQGDQDVSLHFVLWGCLH 510
+ + + + K+ELA ++ E H+KAGT++ QGD+ S + + G ++
Sbjct: 202 KAVAHLSNSVKRELAAVLLFEP-----------HSKAGTVLFSQGDKGTSWYIIWKGSVN 250
Query: 511 VYQRMIDKAEDVCLFVAQPGELVGQLAVLTGEPLIFTLRAQRD-CTFLRISKSDFYEIMR 569
V + G+ GQLA++ P T+ + D C FLR+ K DF I++
Sbjct: 251 VVTH-----GKGLVTTLHEGDDFGQLALVNDAPRAATIILREDNCHFLRVDKQDFNRIIK 305
Score = 34.3 bits (77), Expect = 0.82
Identities = 21/62 (33%), Positives = 31/62 (50%), Gaps = 4/62 (6%)
Query: 603 EAGRALYRQGDRSDCTYIVLNGRLRSVIQRGSGKKELVGEYGRGDLIGVVEALTRQPRAT 662
+AG L+ QGD+ YI+ G + +V+ G G LV GD G + + PRA
Sbjct: 226 KAGTVLFSQGDKGTSWYIIWKGSV-NVVTHGKG---LVTTLHEGDDFGQLALVNDAPRAA 281
Query: 663 TV 664
T+
Sbjct: 282 TI 283
>gi|148747859 Rap guanine nucleotide exchange factor 3 isoform a
[Homo sapiens]
Length = 923
Score = 45.1 bits (105), Expect = 5e-04
Identities = 32/120 (26%), Positives = 56/120 (46%), Gaps = 17/120 (14%)
Query: 451 RQTSSIFEAAKQELAKLMRIEDPSLLNSRVLLHHAKAGTIIARQGDQDVSLHFVLWGCLH 510
+ + + + K+ELA ++ E H+KAGT++ QGD+ S + + G ++
Sbjct: 244 KAVAHLSNSVKRELAAVLLFEP-----------HSKAGTVLFSQGDKGTSWYIIWKGSVN 292
Query: 511 VYQRMIDKAEDVCLFVAQPGELVGQLAVLTGEPLIFTLRAQRD-CTFLRISKSDFYEIMR 569
V + G+ GQLA++ P T+ + D C FLR+ K DF I++
Sbjct: 293 VVTH-----GKGLVTTLHEGDDFGQLALVNDAPRAATIILREDNCHFLRVDKQDFNRIIK 347
Score = 34.3 bits (77), Expect = 0.82
Identities = 21/62 (33%), Positives = 31/62 (50%), Gaps = 4/62 (6%)
Query: 603 EAGRALYRQGDRSDCTYIVLNGRLRSVIQRGSGKKELVGEYGRGDLIGVVEALTRQPRAT 662
+AG L+ QGD+ YI+ G + +V+ G G LV GD G + + PRA
Sbjct: 268 KAGTVLFSQGDKGTSWYIIWKGSV-NVVTHGKG---LVTTLHEGDDFGQLALVNDAPRAA 323
Query: 663 TV 664
T+
Sbjct: 324 TI 325
>gi|42718011 cyclic nucleotide gated channel alpha 2 [Homo sapiens]
Length = 664
Score = 42.4 bits (98), Expect = 0.003
Identities = 38/147 (25%), Positives = 65/147 (44%), Gaps = 13/147 (8%)
Query: 117 PAVLEADLTEGDLANSHLPSEVLYMLKNVRVLGHFEKPLFLELCRHMVFQRLGQGDYVFR 176
PA L A++ N HL + LK VR+ E L +EL + Q GDY+ R
Sbjct: 433 PAKLRAEIA----INVHLST-----LKKVRIFHDCEAGLLVELVLKLRPQVFSPGDYICR 483
Query: 177 PGQPDASIYVVQDGLLELCLPGPDGKECVVKEVVPGDSVNSLLSILDVITGHQHPQRTVS 236
G +Y++++G +L + DG ++ S +SIL++ +RT +
Sbjct: 484 KGDIGKEMYIIKEG--KLAVVADDG--VTQYALLSAGSCFGEISILNIKGSKMGNRRTAN 539
Query: 237 ARAARDSTVLRLPVEAFSAVFTKYPES 263
R+ S + L + T+YP++
Sbjct: 540 IRSLGYSDLFCLSKDDLMEAVTEYPDA 566
>gi|33286446 opioid growth factor receptor [Homo sapiens]
Length = 677
Score = 41.6 bits (96), Expect = 0.005
Identities = 39/130 (30%), Positives = 47/130 (36%), Gaps = 11/130 (8%)
Query: 325 TSATDEPRE-TPGRPPDPTGAPLPGPTGDPVKPTSLETPSAPLLSRCVSMPGDISGLQGG 383
T P+E TPG P + G GP GD + ETP P + G
Sbjct: 504 TEGRTGPKEGTPGSPSETPGPSPAGPAGDEPAESPSETPGPRPAGPAGDEPAESPSETPG 563
Query: 384 PRSDFDMAYERGRISVSLQEEASGGSLAAPAR-----TPTQEPREQPAGACEYSYCEDES 438
PR A G E G S A P R +P++ P +PAG E S
Sbjct: 564 PRP----AGPAGDEPAESPSETPGPSPAGPTRDEPAESPSETPGPRPAGPAGDEPAESPS 619
Query: 439 AT-GGCPFGP 447
T G P GP
Sbjct: 620 ETPGPRPAGP 629
Score = 36.2 bits (82), Expect = 0.21
Identities = 23/62 (37%), Positives = 26/62 (41%), Gaps = 7/62 (11%)
Query: 305 PSPGLPTRTSPVRGSKR----MVSTSATDEPRETPGRPPDPTGAPLPGPTGDPVKPTSLE 360
PSP PTR P + A DEP E+P P P A GP GD + E
Sbjct: 584 PSPAGPTRDEPAESPSETPGPRPAGPAGDEPAESPSETPGPRPA---GPAGDEPAESPSE 640
Query: 361 TP 362
TP
Sbjct: 641 TP 642
Score = 33.1 bits (74), Expect = 1.8
Identities = 38/147 (25%), Positives = 52/147 (35%), Gaps = 15/147 (10%)
Query: 312 RTSPVRGSKRMVSTSATDEPRETPGRPPDPTGAPLP-----GPTGDPVKPTSLET----P 362
RT P G+ S + P G P + + P GP GD + ET P
Sbjct: 507 RTGPKEGTPGSPSETPGPSPAGPAGDEPAESPSETPGPRPAGPAGDEPAESPSETPGPRP 566
Query: 363 SAPLLSRCVSMPGDISG-LQGGPRSDFDMAYERGRISVSLQEEASGGSLAAPARTPTQEP 421
+ P P + G GP D S + +G + PA +P++ P
Sbjct: 567 AGPAGDEPAESPSETPGPSPAGPTRDEPAESP----SETPGPRPAGPAGDEPAESPSETP 622
Query: 422 REQPAGACEYSYCEDESAT-GGCPFGP 447
+PAG E S T G P GP
Sbjct: 623 GPRPAGPAGDEPAESPSETPGPSPAGP 649
Score = 32.0 bits (71), Expect = 4.1
Identities = 42/151 (27%), Positives = 51/151 (33%), Gaps = 22/151 (14%)
Query: 305 PSPGLPTRTSPVRGSKRMVSTSATDEPR------ETPGRPPDPTGAPLP-GPTGDPVKPT 357
PS R + G + S S T PR + P P T P P GPT D +
Sbjct: 538 PSETPGPRPAGPAGDEPAESPSETPGPRPAGPAGDEPAESPSETPGPSPAGPTRDEPAES 597
Query: 358 SLETPSAPLLSRCVSMPGDISGLQGGPRSDFDMAYERGRISVSLQEEASGGSLAAPARTP 417
ETP P + GPR A G E G S A P
Sbjct: 598 PSETPGPRPAGPAGDEPAESPSETPGPRP----AGPAGDEPAESPSETPGPSPAGPT--- 650
Query: 418 TQEPREQPAGACEYSYCED----ESATGGCP 444
R++PA A E + +D SA G P
Sbjct: 651 ----RDEPAKAGEAAELQDAEVESSAKSGKP 677
>gi|217035093 cyclic nucleotide gated channel alpha 1 isoform 1
[Homo sapiens]
Length = 759
Score = 41.2 bits (95), Expect = 0.007
Identities = 33/123 (26%), Positives = 58/123 (47%), Gaps = 6/123 (4%)
Query: 142 LKNVRVLGHFEKPLFLELCRHMVFQRLGQGDYVFRPGQPDASIYVVQDGLLELCLPGPDG 201
LK VR+ E L +EL + Q GDY+ + G +Y++++G +L + DG
Sbjct: 543 LKKVRIFADCEAGLLVELVLKLQPQVYSPGDYICKKGDIGREMYIIKEG--KLAVVADDG 600
Query: 202 KECVVKEVVPGD-SVNSLLSILDVITGHQHPQRTVSARAARDSTVLRLPVEAFSAVFTKY 260
V + VV D S +SIL++ +RT + ++ S + L + T+Y
Sbjct: 601 ---VTQFVVLSDGSYFGEISILNIKGSKAGNRRTANIKSIGYSDLFCLSKDDLMEALTEY 657
Query: 261 PES 263
P++
Sbjct: 658 PDA 660
>gi|71143141 cyclic nucleotide gated channel alpha 1 isoform 2 [Homo
sapiens]
Length = 690
Score = 41.2 bits (95), Expect = 0.007
Identities = 33/123 (26%), Positives = 58/123 (47%), Gaps = 6/123 (4%)
Query: 142 LKNVRVLGHFEKPLFLELCRHMVFQRLGQGDYVFRPGQPDASIYVVQDGLLELCLPGPDG 201
LK VR+ E L +EL + Q GDY+ + G +Y++++G +L + DG
Sbjct: 474 LKKVRIFADCEAGLLVELVLKLQPQVYSPGDYICKKGDIGREMYIIKEG--KLAVVADDG 531
Query: 202 KECVVKEVVPGD-SVNSLLSILDVITGHQHPQRTVSARAARDSTVLRLPVEAFSAVFTKY 260
V + VV D S +SIL++ +RT + ++ S + L + T+Y
Sbjct: 532 ---VTQFVVLSDGSYFGEISILNIKGSKAGNRRTANIKSIGYSDLFCLSKDDLMEALTEY 588
Query: 261 PES 263
P++
Sbjct: 589 PDA 591
>gi|4758958 cAMP-dependent protein kinase, regulatory subunit alpha
2 [Homo sapiens]
Length = 404
Score = 41.2 bits (95), Expect = 0.007
Identities = 69/317 (21%), Positives = 125/317 (39%), Gaps = 28/317 (8%)
Query: 417 PTQEPREQPAGACEYSYCEDESATGGCPFGPYQGRQTSSIFEAAKQELA-KLMRIEDPSL 475
P++ R A Y+ E+E T P Q + EA K L K + E S
Sbjct: 91 PSRFNRRVSVCAETYNPDEEEEDTDPRVIHPKTDEQRCRLQEACKDILLFKNLDQEQLSQ 150
Query: 476 LNSRVLLHHAKAGTIIARQGDQDVSLHFVLWGCLHVYQRMIDKAEDVCLFVAQPGELVGQ 535
+ + KA + QGD + + + G + ++ V + + G+
Sbjct: 151 VLDAMFERIVKADEHVIDQGDDGDNFYVIERGTYDILVTKDNQTRSVGQYDNRGS--FGE 208
Query: 536 LAVLTGEPLIFTLRAQRD--------CTFLRISKSDFYEIMRAQPSVVLSAAHTVAARMS 587
LA++ P T+ A + TF RI + + + S + S + +S
Sbjct: 209 LALMYNTPRAATIVATSEGSLWGLDRVTFRRIIVKNNAKKRKMFESFIESVPLLKSLEVS 268
Query: 588 PFVRQMDFAIDWTAVEAGRALYRQGDRSDCTYIVLNG------RLRSVIQRGSGKKEL-V 640
++ +D I + G + QG+++D YI+ +G R R+ + G +E+ +
Sbjct: 269 ERMKIVD-VIGEKIYKDGERIITQGEKADSFYIIESGEVSILIRSRTKSNKDGGNQEVEI 327
Query: 641 GEYGRGDLIGVVEALTRQPRATTVHAVRDTELAKLP----EGTLGH----IKRRYPQVVT 692
+G G + +T +PRA + +AV D + + E LG +KR
Sbjct: 328 ARCHKGQYFGELALVTNKPRAASAYAVGDVKCLVMDVQAFERLLGPCMDIMKRNISHYEE 387
Query: 693 RLIHLLSQKI-LGNLQQ 708
+L+ + + LGNL Q
Sbjct: 388 QLVKMFGSSVDLGNLGQ 404
>gi|116256354 alpha 2 type IV collagen preproprotein [Homo sapiens]
Length = 1712
Score = 40.8 bits (94), Expect = 0.009
Identities = 32/98 (32%), Positives = 36/98 (36%), Gaps = 18/98 (18%)
Query: 305 PSPGLPTRTSPVRGSKRMVSTSATDEPRETPGRP-----PDPTG----------APLPGP 349
P P PT +RG PR PG P P G LPGP
Sbjct: 692 PGPPGPTGAKGLRGIPGFAGADGGPGPRGLPGDAGREGFPGPPGFIGPRGSKGAVGLPGP 751
Query: 350 TGDPVKPTSLETPSAPLLSRCVSMPGDISGLQGGPRSD 387
G P P L P P R +PG++ G Q GPR D
Sbjct: 752 DGSP-GPIGLPGPDGPPGER--GLPGEVLGAQPGPRGD 786
>gi|120433600 cyclic nucleotide gated channel alpha 3 isoform 2
[Homo sapiens]
Length = 676
Score = 40.4 bits (93), Expect = 0.011
Identities = 34/123 (27%), Positives = 56/123 (45%), Gaps = 6/123 (4%)
Query: 142 LKNVRVLGHFEKPLFLELCRHMVFQRLGQGDYVFRPGQPDASIYVVQDGLLELCLPGPDG 201
LK VR+ E L +EL + GDY+ + G +Y++ +G +L + DG
Sbjct: 459 LKKVRIFQDCEAGLLVELVLKLRPTVFSPGDYICKKGDIGKEMYIINEG--KLAVVADDG 516
Query: 202 KECVVKEVVPGD-SVNSLLSILDVITGHQHPQRTVSARAARDSTVLRLPVEAFSAVFTKY 260
V + VV D S +SIL++ +RT + R+ S + L + T+Y
Sbjct: 517 ---VTQFVVLSDGSYFGEISILNIKGSKSGNRRTANIRSIGYSDLFCLSKDDLMEALTEY 573
Query: 261 PES 263
PE+
Sbjct: 574 PEA 576
>gi|4502917 cyclic nucleotide gated channel alpha 3 isoform 1 [Homo
sapiens]
Length = 694
Score = 40.4 bits (93), Expect = 0.011
Identities = 34/123 (27%), Positives = 56/123 (45%), Gaps = 6/123 (4%)
Query: 142 LKNVRVLGHFEKPLFLELCRHMVFQRLGQGDYVFRPGQPDASIYVVQDGLLELCLPGPDG 201
LK VR+ E L +EL + GDY+ + G +Y++ +G +L + DG
Sbjct: 477 LKKVRIFQDCEAGLLVELVLKLRPTVFSPGDYICKKGDIGKEMYIINEG--KLAVVADDG 534
Query: 202 KECVVKEVVPGD-SVNSLLSILDVITGHQHPQRTVSARAARDSTVLRLPVEAFSAVFTKY 260
V + VV D S +SIL++ +RT + R+ S + L + T+Y
Sbjct: 535 ---VTQFVVLSDGSYFGEISILNIKGSKSGNRRTANIRSIGYSDLFCLSKDDLMEALTEY 591
Query: 261 PES 263
PE+
Sbjct: 592 PEA 594
>gi|72004269 tetra-peptide repeat homeobox [Homo sapiens]
Length = 411
Score = 40.0 bits (92), Expect = 0.015
Identities = 30/89 (33%), Positives = 40/89 (44%), Gaps = 7/89 (7%)
Query: 300 PLRLFPSPG-LPTRTSPVRGSKRMVSTSATDEPRETPG--RPPDPTGAPLPGPTGDPVK- 355
P L P PG +P +P+ G ++ P PG + P P AP+PGP PV+
Sbjct: 89 PAALSPGPGPIP---APIPGPAQIPGPLPGSIPGPIPGPAQIPSPIPAPIPGPISGPVQI 145
Query: 356 PTSLETPSAPLLSRCVSMPGDISGLQGGP 384
P P +S +PG ISG GP
Sbjct: 146 PGPFRGPIPGPISGPAPIPGPISGPFSGP 174
Score = 34.7 bits (78), Expect = 0.63
Identities = 36/126 (28%), Positives = 48/126 (38%), Gaps = 10/126 (7%)
Query: 305 PSPGLPTRTSPVRG--SKRMVSTSATDEPRETPGRPPDPTGAPLPGPTGDPVKPTSLETP 362
P PG + +P+ G S + P PG P P P+PGP P+ P + P
Sbjct: 152 PIPGPISGPAPIPGPISGPFSGPNPGPIPGPNPGPIPGPISGPIPGPISVPI-PGPIPGP 210
Query: 363 -SAPLLSRCVS-----MPGDISGLQGGPRSDFDMAYERGRISVSLQEEASG-GSLAAPAR 415
S P+ +PG ISG GP G I + SG G + P
Sbjct: 211 ISGPISGPNPGPIPGPIPGPISGPNPGPIPGPISGPNPGLIPGPIPGPISGPGPIIGPIP 270
Query: 416 TPTQEP 421
+P Q P
Sbjct: 271 SPAQIP 276
>gi|114205399 cyclic nucleotide gated channel beta 1 isoform a [Homo
sapiens]
Length = 1251
Score = 39.7 bits (91), Expect = 0.019
Identities = 34/117 (29%), Positives = 56/117 (47%), Gaps = 14/117 (11%)
Query: 155 LFLELCRHMVFQRLGQ--------GDYVFRPGQPDASIYVVQDGLLELCLPGPDGKECVV 206
LF R M+F L + DYV + G+ +Y++Q G +++ L GPDGK +V
Sbjct: 962 LFQGCDRQMIFDMLKRLRSVVYLPNDYVCKKGEIGREMYIIQAGQVQV-LGGPDGKSVLV 1020
Query: 207 KEVVPGDSVNSLLSILDVITGHQHPQRTVSARAARDSTVLRLPVEAFSAVFTKYPES 263
+ SV +S+L V G+ +RT + A + + L + + + YPES
Sbjct: 1021 --TLKAGSVFGEISLLAVGGGN---RRTANVVAHGFTNLFILDKKDLNEILVHYPES 1072
>gi|116089335 BR serine/threonine kinase 2 [Homo sapiens]
Length = 668
Score = 38.9 bits (89), Expect = 0.033
Identities = 22/52 (42%), Positives = 29/52 (55%), Gaps = 3/52 (5%)
Query: 312 RTSPVRGSKRMVSTSATDEPRETPGRPPDPTGAPLPGPTGDPVKPTSLETPS 363
R+ + G+ +STS PR TP P P G+PLP P G PV T E+P+
Sbjct: 409 RSRSISGASSGLSTSPLSSPRVTPH--PSPRGSPLPTPKGTPVH-TPKESPA 457
>gi|156071470 hyperpolarization activated cyclic nucleotide-gated
potassium channel 2 [Homo sapiens]
Length = 889
Score = 38.1 bits (87), Expect = 0.057
Identities = 56/250 (22%), Positives = 91/250 (36%), Gaps = 52/250 (20%)
Query: 165 FQRLGQGDYVFRPGQPDASIYVVQDGLLELCLPGPDGKECVVKEVVPGDSVNSLLSILDV 224
F+ GDY+ R G +Y +Q G++ + G KE+ D S + +
Sbjct: 562 FEVFQPGDYIIREGTIGKKMYFIQHGVVSVLTKGN-------KEMKLSDG--SYFGEICL 612
Query: 225 ITGHQHPQRTVSARAARDSTVLRLPVEAFSAVFTKYPESLVRVVQIIMVRLQRV---TFL 281
+T +RT S RA + L V+ F+ V +YP + + RL R+ +
Sbjct: 613 LT---RGRRTASVRADTYCRLYSLSVDNFNEVLEEYPMMRRAFETVAIDRLDRIGKKNSI 669
Query: 282 ALHNYL-GLTNELFSHEI---------------------QPLRLFPSPGLPTRTSPV--- 316
LH L + +F+++ Q + LFP P P + +
Sbjct: 670 LLHKVQHDLNSGVFNNQENAIIQEIVKYDREMVQQAELGQRVGLFPPPPPPPQVTSAIAT 729
Query: 317 -----------RGSKRMVSTSATDEPRETPGRPPDPT-GAPLPGPTGDPVKPTSLETPSA 364
+ ++ +V A PR PP P A PGP P + +P A
Sbjct: 730 LQQAAAMSFCPQVARPLVGPLALGSPRLVRRPPPGPAPAAASPGPPPPASPPGAPASPRA 789
Query: 365 PLLSRCVSMP 374
P S +P
Sbjct: 790 PRTSPYGGLP 799
Score = 31.2 bits (69), Expect = 6.9
Identities = 34/124 (27%), Positives = 46/124 (37%), Gaps = 9/124 (7%)
Query: 331 PRETPGRPPDPTGAPLPGPTGDPVKPTSLETPSAPLLSRCVSMPGDISGLQGGPRSDFDM 390
P E+PG P P G P P P P + P AP + P + P D
Sbjct: 10 PGESPGATPAP-GPPPPPPPAPPQQQPPPPPPPAPPPGPGPAPPQHPPRAEALPPEAADE 68
Query: 391 AYERGRISVSLQEEASGGSLAAPARTPTQEPREQPAGACEYSYCEDESATGGCPFGPYQG 450
RGR+ ++S G P T + P G C E + + G P GP +G
Sbjct: 69 GGPRGRLR---SRDSSCGRPGTPGAAST--AKGSPNGECGRG--EPQCSPAG-PEGPARG 120
Query: 451 RQTS 454
+ S
Sbjct: 121 PKVS 124
>gi|145309322 insulinoma-associated protein IA-6 [Homo sapiens]
Length = 566
Score = 38.1 bits (87), Expect = 0.057
Identities = 36/133 (27%), Positives = 43/133 (32%), Gaps = 25/133 (18%)
Query: 310 PTRTSPVRGSKRMVSTSATDEPRETPGRPPDPTG--------------APLPGPTGDPVK 355
PTR P +G + + P G P G P P P+ P K
Sbjct: 55 PTREEPGKGLTAEAAREQSGSPCRAAGVSPGTGGREGAEWRAGGREGPGPSPSPSPSPAK 114
Query: 356 PTSLETPSAPLLSRCVSMPGDISGLQGGPRSDFDMAYERGRISVSLQEEAS---GGSLAA 412
P E A L RC+S P GG A S S+ A+ G
Sbjct: 115 PAGAELRRA-FLERCLSSPVSAESFPGG-------AAAVAAFSCSVAPAAAPTPGEQFLL 166
Query: 413 PARTPTQEPREQP 425
P R P EP QP
Sbjct: 167 PLRAPFPEPALQP 179
>gi|24431935 reticulon 4 isoform A [Homo sapiens]
Length = 1192
Score = 37.4 bits (85), Expect = 0.096
Identities = 46/183 (25%), Positives = 66/183 (36%), Gaps = 22/183 (12%)
Query: 305 PSPGLPTRTSPVRGSKRMVSTSATDEPRETPGRPPDPTGA---PLPGPTGDPVKPTSLET 361
PSP T +P S VS S E E P RPP P A P P P P
Sbjct: 110 PSPVSSTVPAPSPLSAAAVSPSKLPEDDEPPARPPPPPPASVSPQAEPVWTPPAPAPAAP 169
Query: 362 PSAPLLSR-----------CVSMPGDISGLQGGPRSDFDMAYERGRISVSLQEEASGGSL 410
PS P + ++P + + D+ + G + QE+ L
Sbjct: 170 PSTPAAPKRRGSSGSVDETLFALPAASEPVIRSSAENMDLKEQPGNTISAGQEDFPSVLL 229
Query: 411 AAPARTPTQEPREQPAGACEYSYCEDESATGGCPFGPYQGRQTSSIFEAAKQ--ELAKLM 468
A P+ P A E+ Y + S P +G ++ EA+K+ E AK +
Sbjct: 230 ETAASLPSLSPL-SAASFKEHEYLGNLSTV-----LPTEGTLQENVSEASKEVSEKAKTL 283
Query: 469 RIE 471
I+
Sbjct: 284 LID 286
>gi|197245373 proline rich 22 isoform 1 [Homo sapiens]
Length = 422
Score = 37.0 bits (84), Expect = 0.13
Identities = 58/260 (22%), Positives = 87/260 (33%), Gaps = 44/260 (16%)
Query: 108 PTLQRKEPPPAV--LEADLTEGDLANSHLPSEVLYMLKNVRVLGHFEKPLFLEL-CRHMV 164
P + +PPP + L A+ T A SHL LGHF P L + +
Sbjct: 186 PPPKENKPPPVLITLPAEPTLPPDAYSHLQGH----------LGHFPGPEPLAFPVKELQ 235
Query: 165 FQRLGQGDYVFRPGQPDASIYVVQDGLLELCLPGPDGKECVVKEVVPGDSVNSLLSILDV 224
G ++ PG + + V++G L K + + + + D
Sbjct: 236 GSGARPGVPLYPPGLSELKVAEVKEGALLGAGKAKAPKTARALALPDKVLLEDAMKLFDC 295
Query: 225 ITGHQHPQRTV------------SARAARDSTVLRLPVEAFSAVFTKYPESLVRVVQIIM 272
+ G P+ T+ +A D L LP E S ++ PE L V +
Sbjct: 296 LPGASEPEGTLCEVPGPALPDSSGGNSADDIRSLCLPEELLSFDYS-VPEILDTVSNVDY 354
Query: 273 VRLQRVTFLALHNYLGLTNELFSHEIQPLRLFPSPGLPTRTSPVRGSKRMVSTSATDEPR 332
N+ L E H P P +P+ KR ST+ +P
Sbjct: 355 ----------FFNFKALDEEQPPH--------PGPPATNTPAPILSGKRKASTAKKGKPG 396
Query: 333 ETPGRPPDPTGAPLPGPTGD 352
+P P A PGP D
Sbjct: 397 RKARQPAGPASATPPGPRED 416
>gi|23503299 proline rich 22 isoform 2 [Homo sapiens]
Length = 420
Score = 37.0 bits (84), Expect = 0.13
Identities = 58/260 (22%), Positives = 87/260 (33%), Gaps = 44/260 (16%)
Query: 108 PTLQRKEPPPAV--LEADLTEGDLANSHLPSEVLYMLKNVRVLGHFEKPLFLEL-CRHMV 164
P + +PPP + L A+ T A SHL LGHF P L + +
Sbjct: 184 PPPKENKPPPVLITLPAEPTLPPDAYSHLQGH----------LGHFPGPEPLAFPVKELQ 233
Query: 165 FQRLGQGDYVFRPGQPDASIYVVQDGLLELCLPGPDGKECVVKEVVPGDSVNSLLSILDV 224
G ++ PG + + V++G L K + + + + D
Sbjct: 234 GSGARPGVPLYPPGLSELKVAEVKEGALLGAGKAKAPKTARALALPDKVLLEDAMKLFDC 293
Query: 225 ITGHQHPQRTV------------SARAARDSTVLRLPVEAFSAVFTKYPESLVRVVQIIM 272
+ G P+ T+ +A D L LP E S ++ PE L V +
Sbjct: 294 LPGASEPEGTLCEVPGPALPDSSGGNSADDIRSLCLPEELLSFDYS-VPEILDTVSNVDY 352
Query: 273 VRLQRVTFLALHNYLGLTNELFSHEIQPLRLFPSPGLPTRTSPVRGSKRMVSTSATDEPR 332
N+ L E H P P +P+ KR ST+ +P
Sbjct: 353 ----------FFNFKALDEEQPPH--------PGPPATNTPAPILSGKRKASTAKKGKPG 394
Query: 333 ETPGRPPDPTGAPLPGPTGD 352
+P P A PGP D
Sbjct: 395 RKARQPAGPASATPPGPRED 414
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.136 0.404
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 53,892,384
Number of Sequences: 37866
Number of extensions: 2682292
Number of successful extensions: 13380
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 257
Number of HSP's that attempted gapping in prelim test: 11713
Number of HSP's gapped (non-prelim): 1781
length of query: 1327
length of database: 18,247,518
effective HSP length: 114
effective length of query: 1213
effective length of database: 13,930,794
effective search space: 16898053122
effective search space used: 16898053122
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 68 (30.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.