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Search of human proteins with 229089137
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|229089137 biorientation of chromosomes in cell division 1
isoform b [Homo sapiens]
(129 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|229089137 biorientation of chromosomes in cell division 1 iso... 264 2e-71
gi|34147529 biorientation of chromosomes in cell division 1 isof... 248 9e-67
gi|87299628 biorientation of chromosomes in cell division 1-like... 127 3e-30
gi|119395750 keratin 1 [Homo sapiens] 44 5e-05
gi|49574532 glycogen synthase kinase 3 alpha [Homo sapiens] 44 5e-05
gi|89145413 short stature homeobox 2 isoform a [Homo sapiens] 43 8e-05
gi|51479192 ring finger protein 1 [Homo sapiens] 43 8e-05
gi|110347455 Brn3b POU domain transcription factor [Homo sapiens] 42 1e-04
gi|40068464 AT rich interactive domain 1B (SWI1-like) isoform 2 ... 42 1e-04
gi|40068466 AT rich interactive domain 1B (SWI1-like) isoform 1 ... 42 1e-04
gi|40068462 AT rich interactive domain 1B (SWI1-like) isoform 3 ... 42 1e-04
gi|109452587 family with sequence similarity 98, member B isofor... 42 2e-04
gi|73427806 v-maf musculoaponeurotic fibrosarcoma oncogene homol... 41 2e-04
gi|5453736 v-maf musculoaponeurotic fibrosarcoma oncogene homolo... 41 2e-04
gi|4885597 sine oculis homeobox homolog 3 [Homo sapiens] 41 3e-04
gi|51702521 POU domain, class 3, transcription factor 2 [Homo sa... 40 5e-04
gi|45439359 triple functional domain (PTPRF interacting) [Homo s... 40 5e-04
gi|154091020 leucine-rich repeats and calponin homology (CH) dom... 40 7e-04
gi|4502565 calpain, small subunit 1 [Homo sapiens] 40 7e-04
gi|51599151 calpain, small subunit 1 [Homo sapiens] 40 7e-04
gi|33620755 YEATS domain containing 2 [Homo sapiens] 40 7e-04
gi|53829370 neuralized homolog 4 isoform 1 [Homo sapiens] 39 9e-04
gi|53829368 neuralized homolog 4 isoform 2 [Homo sapiens] 39 9e-04
gi|210147522 zinc finger, SWIM-type containing 6 [Homo sapiens] 39 9e-04
gi|13994190 frizzled 8 [Homo sapiens] 39 0.001
gi|109255251 loricrin [Homo sapiens] 39 0.001
gi|34452713 Ca2+-dependent secretion activator isoform 2 [Homo s... 39 0.001
gi|34452715 Ca2+-dependent secretion activator isoform 1 [Homo s... 39 0.001
gi|34452711 Ca2+-dependent secretion activator isoform 3 [Homo s... 39 0.001
gi|55956899 keratin 9 [Homo sapiens] 38 0.002
>gi|229089137 biorientation of chromosomes in cell division 1
isoform b [Homo sapiens]
Length = 129
Score = 264 bits (674), Expect = 2e-71
Identities = 129/129 (100%), Positives = 129/129 (100%)
Query: 1 MADGGGGGGTGAVGGGGTSQASAGAATGATGASGGGGPINPASLPPGDPQLIALIVEQLK 60
MADGGGGGGTGAVGGGGTSQASAGAATGATGASGGGGPINPASLPPGDPQLIALIVEQLK
Sbjct: 1 MADGGGGGGTGAVGGGGTSQASAGAATGATGASGGGGPINPASLPPGDPQLIALIVEQLK 60
Query: 61 SRGLFDSFRRDCLADVDTKPAYQNLRQKVDNFVSTHLDKQEWNPTMNKNQLRNGLRQSVV 120
SRGLFDSFRRDCLADVDTKPAYQNLRQKVDNFVSTHLDKQEWNPTMNKNQLRNGLRQSVV
Sbjct: 61 SRGLFDSFRRDCLADVDTKPAYQNLRQKVDNFVSTHLDKQEWNPTMNKNQLRNGLRQSVV 120
Query: 121 QIRQTPFES 129
QIRQTPFES
Sbjct: 121 QIRQTPFES 129
>gi|34147529 biorientation of chromosomes in cell division 1 isoform
a [Homo sapiens]
Length = 185
Score = 248 bits (633), Expect = 9e-67
Identities = 121/121 (100%), Positives = 121/121 (100%)
Query: 1 MADGGGGGGTGAVGGGGTSQASAGAATGATGASGGGGPINPASLPPGDPQLIALIVEQLK 60
MADGGGGGGTGAVGGGGTSQASAGAATGATGASGGGGPINPASLPPGDPQLIALIVEQLK
Sbjct: 1 MADGGGGGGTGAVGGGGTSQASAGAATGATGASGGGGPINPASLPPGDPQLIALIVEQLK 60
Query: 61 SRGLFDSFRRDCLADVDTKPAYQNLRQKVDNFVSTHLDKQEWNPTMNKNQLRNGLRQSVV 120
SRGLFDSFRRDCLADVDTKPAYQNLRQKVDNFVSTHLDKQEWNPTMNKNQLRNGLRQSVV
Sbjct: 61 SRGLFDSFRRDCLADVDTKPAYQNLRQKVDNFVSTHLDKQEWNPTMNKNQLRNGLRQSVV 120
Query: 121 Q 121
Q
Sbjct: 121 Q 121
>gi|87299628 biorientation of chromosomes in cell division 1-like
[Homo sapiens]
Length = 3051
Score = 127 bits (318), Expect = 3e-30
Identities = 62/98 (63%), Positives = 72/98 (73%), Gaps = 7/98 (7%)
Query: 24 GAATGATGASGGGGPINPASLPPGDPQLIALIVEQLKSRGLFDSFRRDCLADVDTKPAYQ 83
GA GA GA G G GDPQL+A+IV LKS+GLFD FRRDCLADVDTKPAYQ
Sbjct: 33 GAGPGAGGAGGAGAGA-------GDPQLVAMIVNHLKSQGLFDQFRRDCLADVDTKPAYQ 85
Query: 84 NLRQKVDNFVSTHLDKQEWNPTMNKNQLRNGLRQSVVQ 121
NLRQ+VDNFV+ HL W+P +NKNQLRN +RQ V++
Sbjct: 86 NLRQRVDNFVANHLATHTWSPHLNKNQLRNNIRQQVLK 123
>gi|119395750 keratin 1 [Homo sapiens]
Length = 644
Score = 43.5 bits (101), Expect = 5e-05
Identities = 20/44 (45%), Positives = 24/44 (54%)
Query: 4 GGGGGGTGAVGGGGTSQASAGAATGATGASGGGGPINPASLPPG 47
GGGGGG G+ G GG+S S G + G+ G GG G S G
Sbjct: 543 GGGGGGRGSYGSGGSSYGSGGGSYGSGGGGGGHGSYGSGSSSGG 586
Score = 38.1 bits (87), Expect = 0.002
Identities = 16/33 (48%), Positives = 21/33 (63%)
Query: 4 GGGGGGTGAVGGGGTSQASAGAATGATGASGGG 36
G GGGG G+ GG G+ S+G + G G+S GG
Sbjct: 590 GSGGGGGGSSGGRGSGGGSSGGSIGGRGSSSGG 622
Score = 37.7 bits (86), Expect = 0.003
Identities = 18/35 (51%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
Query: 4 GGG--GGGTGAVGGGGTSQASAGAATGATGASGGG 36
GGG GGG G G GG+S S G + G+ G GGG
Sbjct: 514 GGGSRGGGGGGYGSGGSSYGSGGGSYGSGGGGGGG 548
Score = 36.6 bits (83), Expect = 0.006
Identities = 23/57 (40%), Positives = 27/57 (47%), Gaps = 10/57 (17%)
Query: 4 GGGGGGTGAVGGGGTSQ-ASAGAATGATGASGGG-----GPINPASLPPGDPQLIAL 54
GGGG G G +GGGG S G G G GGG GP+ PPG Q + +
Sbjct: 105 GGGGFGGGGIGGGGFGGFGSGGGGFGGGGFGGGGYGGGYGPV----CPPGGIQEVTI 157
Score = 36.6 bits (83), Expect = 0.006
Identities = 16/34 (47%), Positives = 21/34 (61%)
Query: 4 GGGGGGTGAVGGGGTSQASAGAATGATGASGGGG 37
G GGGG G G G+ +S G+ G+ G+ GGGG
Sbjct: 540 GSGGGGGGGRGSYGSGGSSYGSGGGSYGSGGGGG 573
Score = 36.6 bits (83), Expect = 0.006
Identities = 17/34 (50%), Positives = 20/34 (58%)
Query: 4 GGGGGGTGAVGGGGTSQASAGAATGATGASGGGG 37
GGG G+G GGG S S ++ G G SGGGG
Sbjct: 562 GGGSYGSGGGGGGHGSYGSGSSSGGYRGGSGGGG 595
Score = 36.6 bits (83), Expect = 0.006
Identities = 16/33 (48%), Positives = 19/33 (57%)
Query: 4 GGGGGGTGAVGGGGTSQASAGAATGATGASGGG 36
GGGGGG G+ G G +S G + G G S GG
Sbjct: 569 GGGGGGHGSYGSGSSSGGYRGGSGGGGGGSSGG 601
Score = 35.4 bits (80), Expect = 0.013
Identities = 18/38 (47%), Positives = 20/38 (52%), Gaps = 4/38 (10%)
Query: 4 GGGGGGTGA----VGGGGTSQASAGAATGATGASGGGG 37
GGGGGG G+ G GG S S G G G+ G GG
Sbjct: 519 GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGRGSYGSGG 556
Score = 34.3 bits (77), Expect = 0.028
Identities = 16/34 (47%), Positives = 16/34 (47%)
Query: 4 GGGGGGTGAVGGGGTSQASAGAATGATGASGGGG 37
GGGG G G GGGG G G GGGG
Sbjct: 100 GGGGFGGGGFGGGGIGGGGFGGFGSGGGGFGGGG 133
Score = 32.7 bits (73), Expect = 0.081
Identities = 16/34 (47%), Positives = 16/34 (47%)
Query: 4 GGGGGGTGAVGGGGTSQASAGAATGATGASGGGG 37
GGGG G G GGGG G SGGGG
Sbjct: 95 GGGGFGGGGFGGGGFGGGGIGGGGFGGFGSGGGG 128
Score = 32.3 bits (72), Expect = 0.11
Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 4/40 (10%)
Query: 4 GGGGGGTGAVGGGGTSQASA----GAATGATGASGGGGPI 39
GGGGG +G G GG S + G+++G +SGG +
Sbjct: 593 GGGGGSSGGRGSGGGSSGGSIGGRGSSSGGVKSSGGSSSV 632
Score = 30.4 bits (67), Expect = 0.40
Identities = 15/34 (44%), Positives = 15/34 (44%)
Query: 4 GGGGGGTGAVGGGGTSQASAGAATGATGASGGGG 37
G GGGG G G GG G G G G GG
Sbjct: 93 GYGGGGFGGGGFGGGGFGGGGIGGGGFGGFGSGG 126
Score = 29.3 bits (64), Expect = 0.90
Identities = 13/31 (41%), Positives = 16/31 (51%)
Query: 5 GGGGGTGAVGGGGTSQASAGAATGATGASGG 35
G GGG G G G+ +S G G+ G GG
Sbjct: 567 GSGGGGGGHGSYGSGSSSGGYRGGSGGGGGG 597
Score = 28.5 bits (62), Expect = 1.5
Identities = 21/60 (35%), Positives = 29/60 (48%), Gaps = 12/60 (20%)
Query: 4 GGGGGGTGAVGGGGTSQASAGAATGATGASGGGGPINPASLPPGDPQLIALIVEQLKSRG 63
GGGGG + GGGG G+ GA GG G + +L G + I++ V + RG
Sbjct: 40 GGGGGRFSSCGGGG----------GSFGAGGGFGSRSLVNL--GGSKSISISVARGGGRG 87
Score = 28.5 bits (62), Expect = 1.5
Identities = 15/32 (46%), Positives = 15/32 (46%), Gaps = 4/32 (12%)
Query: 5 GGGGGTGAVGGGGTSQASAGAATGATGASGGG 36
GGG G G GGGG G G G GGG
Sbjct: 91 GGGYGGGGFGGGG----FGGGGFGGGGIGGGG 118
Score = 28.1 bits (61), Expect = 2.0
Identities = 14/34 (41%), Positives = 14/34 (41%)
Query: 4 GGGGGGTGAVGGGGTSQASAGAATGATGASGGGG 37
G G G G GGGG G G GGGG
Sbjct: 85 GRGSGFGGGYGGGGFGGGGFGGGGFGGGGIGGGG 118
Score = 27.7 bits (60), Expect = 2.6
Identities = 18/44 (40%), Positives = 20/44 (45%), Gaps = 10/44 (22%)
Query: 4 GGGGGGTGAVGG---------GGTSQASAGAATGA-TGASGGGG 37
GGGGG GA GG GG+ S A G G+ GGG
Sbjct: 50 GGGGGSFGAGGGFGSRSLVNLGGSKSISISVARGGGRGSGFGGG 93
Score = 26.6 bits (57), Expect = 5.8
Identities = 13/31 (41%), Positives = 14/31 (45%)
Query: 7 GGGTGAVGGGGTSQASAGAATGATGASGGGG 37
GGG G+ GGG G G GGGG
Sbjct: 83 GGGRGSGFGGGYGGGGFGGGGFGGGGFGGGG 113
>gi|49574532 glycogen synthase kinase 3 alpha [Homo sapiens]
Length = 483
Score = 43.5 bits (101), Expect = 5e-05
Identities = 21/45 (46%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
Query: 4 GGGGGGTGAVG--GGGTSQASAGAATGATGASGGGGPINPASLPP 46
GG GGG +VG GGG +S+G G +G G GGP S PP
Sbjct: 44 GGTGGGKASVGAMGGGVGASSSGGGPGGSGGGGSGGPGAGTSFPP 88
Score = 40.0 bits (92), Expect = 5e-04
Identities = 20/43 (46%), Positives = 23/43 (53%)
Query: 5 GGGGGTGAVGGGGTSQASAGAATGATGASGGGGPINPASLPPG 47
GGG G GG G ++ S+ A G G GGGGP AS P G
Sbjct: 3 GGGPSGGGPGGSGRARTSSFAEPGGGGGGGGGGPGGSASGPGG 45
Score = 26.9 bits (58), Expect = 4.5
Identities = 16/40 (40%), Positives = 18/40 (45%), Gaps = 6/40 (15%)
Query: 2 ADGGG------GGGTGAVGGGGTSQASAGAATGATGASGG 35
A GGG GGG G GGGG+ AG + G G
Sbjct: 55 AMGGGVGASSSGGGPGGSGGGGSGGPGAGTSFPPPGVKLG 94
>gi|89145413 short stature homeobox 2 isoform a [Homo sapiens]
Length = 331
Score = 42.7 bits (99), Expect = 8e-05
Identities = 28/68 (41%), Positives = 32/68 (47%), Gaps = 10/68 (14%)
Query: 2 ADGGGGGGTGAVGGGGTSQASAGAATGATGASGGGGPIN-------PASLPPGDPQLIAL 54
A GGGGGG G GGGG G A G GA GG P+ S PG P+L
Sbjct: 59 AGGGGGGGGGGGGGGGGGGVGGGGAGG--GAGGGRSPVRELDMGAAERSREPGSPRLTE- 115
Query: 55 IVEQLKSR 62
+ +LK R
Sbjct: 116 VSPELKDR 123
>gi|51479192 ring finger protein 1 [Homo sapiens]
Length = 406
Score = 42.7 bits (99), Expect = 8e-05
Identities = 24/46 (52%), Positives = 27/46 (58%), Gaps = 6/46 (13%)
Query: 4 GGGGGGTGAVGGGGTSQASAGAATGATGASGGGGPINPASLPPGDP 49
G GGGGTG VGGG S+ S G G + GGG + P S PPG P
Sbjct: 214 GTGGGGTGGVGGGAGSEDS-----GDRGGTLGGGTLGPPS-PPGAP 253
Score = 28.1 bits (61), Expect = 2.0
Identities = 16/39 (41%), Positives = 16/39 (41%), Gaps = 6/39 (15%)
Query: 4 GGGGGGTGAVGGGGTSQASAGAATGATGASGGGGPINPA 42
GG GGG GG G GA GG GP PA
Sbjct: 317 GGPGGGASDTGGPDGCGGEGG------GAGGGDGPEEPA 349
>gi|110347455 Brn3b POU domain transcription factor [Homo sapiens]
Length = 409
Score = 42.4 bits (98), Expect = 1e-04
Identities = 26/63 (41%), Positives = 35/63 (55%), Gaps = 7/63 (11%)
Query: 2 ADGGGGGGTGAVGGGGTSQASAGAATGATGASGGGG--PINPASLPPGDPQLIALIVEQL 59
A GGGGGG G GGGG S +S+ ++G+SGGGG + A LP + + E L
Sbjct: 53 AGGGGGGGGGGGGGGGRSSSSS-----SSGSSGGGGSEAMRRACLPTPPSNIFGGLDESL 107
Query: 60 KSR 62
+R
Sbjct: 108 LAR 110
>gi|40068464 AT rich interactive domain 1B (SWI1-like) isoform 2
[Homo sapiens]
Length = 2191
Score = 42.0 bits (97), Expect = 1e-04
Identities = 20/34 (58%), Positives = 22/34 (64%)
Query: 4 GGGGGGTGAVGGGGTSQASAGAATGATGASGGGG 37
GGGGGG GA GG + A A AA A A+GGGG
Sbjct: 263 GGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGG 296
Score = 42.0 bits (97), Expect = 1e-04
Identities = 19/34 (55%), Positives = 21/34 (61%)
Query: 4 GGGGGGTGAVGGGGTSQASAGAATGATGASGGGG 37
GGGGGG GA G G + A+A AA A GGGG
Sbjct: 265 GGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGG 298
Score = 41.6 bits (96), Expect = 2e-04
Identities = 18/34 (52%), Positives = 19/34 (55%)
Query: 4 GGGGGGTGAVGGGGTSQASAGAATGATGASGGGG 37
GGGGGG GG G +A AA A A GGGG
Sbjct: 264 GGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGG 297
Score = 39.7 bits (91), Expect = 7e-04
Identities = 17/33 (51%), Positives = 19/33 (57%)
Query: 4 GGGGGGTGAVGGGGTSQASAGAATGATGASGGG 36
GGGG G G G G + A+A AA A G GGG
Sbjct: 267 GGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGG 299
Score = 37.0 bits (84), Expect = 0.004
Identities = 16/31 (51%), Positives = 17/31 (54%)
Query: 5 GGGGGTGAVGGGGTSQASAGAATGATGASGG 35
GGGGG G GGGG+ G GA GA G
Sbjct: 249 GGGGGGGGGGGGGSGGGGGGGGAGAGGAGAG 279
Score = 35.0 bits (79), Expect = 0.016
Identities = 18/34 (52%), Positives = 19/34 (55%), Gaps = 2/34 (5%)
Query: 4 GGGGGGTGAVGGGGTSQASAGAATGATGASGGGG 37
GGG G GA G G A+A AA A G GGGG
Sbjct: 268 GGGAGAGGA--GAGAVAAAAAAAAAAAGGGGGGG 299
Score = 34.7 bits (78), Expect = 0.021
Identities = 15/33 (45%), Positives = 16/33 (48%)
Query: 4 GGGGGGTGAVGGGGTSQASAGAATGATGASGGG 36
G GGGG G GGGG S G G +G G
Sbjct: 247 GAGGGGGGGGGGGGGSGGGGGGGGAGAGGAGAG 279
Score = 33.5 bits (75), Expect = 0.048
Identities = 15/39 (38%), Positives = 17/39 (43%)
Query: 5 GGGGGTGAVGGGGTSQASAGAATGATGASGGGGPINPAS 43
G GGG G GGGG G GA G G + A+
Sbjct: 247 GAGGGGGGGGGGGGGSGGGGGGGGAGAGGAGAGAVAAAA 285
Score = 26.6 bits (57), Expect = 5.8
Identities = 15/37 (40%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Query: 2 ADGGGGGGTGAVGGG-GTSQASAGAATGATGASGGGG 37
A GGGGGG G G G + G GGGG
Sbjct: 292 AGGGGGGGYGGSSAGYGVLSSPRQQGGGMMMGPGGGG 328
Score = 26.2 bits (56), Expect = 7.6
Identities = 12/39 (30%), Positives = 16/39 (41%)
Query: 2 ADGGGGGGTGAVGGGGTSQASAGAATGATGASGGGGPIN 40
A G G G A + A G G G+S G G ++
Sbjct: 273 AGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSSAGYGVLS 311
Score = 25.8 bits (55), Expect = 9.9
Identities = 13/31 (41%), Positives = 14/31 (45%)
Query: 5 GGGGGTGAVGGGGTSQASAGAATGATGASGG 35
GGGGG AV SA A+G G G
Sbjct: 161 GGGGGPAAVPEFNNYYGSAAPASGGPGGRAG 191
Score = 25.8 bits (55), Expect = 9.9
Identities = 19/60 (31%), Positives = 26/60 (43%), Gaps = 1/60 (1%)
Query: 5 GGGGGTGAVGGGGTSQASAGAATGATGASG-GGGPINPASLPPGDPQLIALIVEQLKSRG 63
GGG G GGG S + A A + A G G +P+ P QL+ ++S G
Sbjct: 317 GGGMMMGPGGGGAASLSKAAAGSAAGGFQRFAGQNQHPSGATPTLNQLLTSPSPMMRSYG 376
>gi|40068466 AT rich interactive domain 1B (SWI1-like) isoform 1
[Homo sapiens]
Length = 2231
Score = 42.0 bits (97), Expect = 1e-04
Identities = 20/34 (58%), Positives = 22/34 (64%)
Query: 4 GGGGGGTGAVGGGGTSQASAGAATGATGASGGGG 37
GGGGGG GA GG + A A AA A A+GGGG
Sbjct: 263 GGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGG 296
Score = 42.0 bits (97), Expect = 1e-04
Identities = 19/34 (55%), Positives = 21/34 (61%)
Query: 4 GGGGGGTGAVGGGGTSQASAGAATGATGASGGGG 37
GGGGGG GA G G + A+A AA A GGGG
Sbjct: 265 GGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGG 298
Score = 41.6 bits (96), Expect = 2e-04
Identities = 18/34 (52%), Positives = 19/34 (55%)
Query: 4 GGGGGGTGAVGGGGTSQASAGAATGATGASGGGG 37
GGGGGG GG G +A AA A A GGGG
Sbjct: 264 GGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGG 297
Score = 39.7 bits (91), Expect = 7e-04
Identities = 17/33 (51%), Positives = 19/33 (57%)
Query: 4 GGGGGGTGAVGGGGTSQASAGAATGATGASGGG 36
GGGG G G G G + A+A AA A G GGG
Sbjct: 267 GGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGG 299
Score = 37.0 bits (84), Expect = 0.004
Identities = 16/31 (51%), Positives = 17/31 (54%)
Query: 5 GGGGGTGAVGGGGTSQASAGAATGATGASGG 35
GGGGG G GGGG+ G GA GA G
Sbjct: 249 GGGGGGGGGGGGGSGGGGGGGGAGAGGAGAG 279
Score = 35.0 bits (79), Expect = 0.016
Identities = 18/34 (52%), Positives = 19/34 (55%), Gaps = 2/34 (5%)
Query: 4 GGGGGGTGAVGGGGTSQASAGAATGATGASGGGG 37
GGG G GA G G A+A AA A G GGGG
Sbjct: 268 GGGAGAGGA--GAGAVAAAAAAAAAAAGGGGGGG 299
Score = 34.7 bits (78), Expect = 0.021
Identities = 15/33 (45%), Positives = 16/33 (48%)
Query: 4 GGGGGGTGAVGGGGTSQASAGAATGATGASGGG 36
G GGGG G GGGG S G G +G G
Sbjct: 247 GAGGGGGGGGGGGGGSGGGGGGGGAGAGGAGAG 279
Score = 33.5 bits (75), Expect = 0.048
Identities = 15/39 (38%), Positives = 17/39 (43%)
Query: 5 GGGGGTGAVGGGGTSQASAGAATGATGASGGGGPINPAS 43
G GGG G GGGG G GA G G + A+
Sbjct: 247 GAGGGGGGGGGGGGGSGGGGGGGGAGAGGAGAGAVAAAA 285
Score = 26.6 bits (57), Expect = 5.8
Identities = 15/37 (40%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Query: 2 ADGGGGGGTGAVGGG-GTSQASAGAATGATGASGGGG 37
A GGGGGG G G G + G GGGG
Sbjct: 292 AGGGGGGGYGGSSAGYGVLSSPRQQGGGMMMGPGGGG 328
Score = 26.2 bits (56), Expect = 7.6
Identities = 12/39 (30%), Positives = 16/39 (41%)
Query: 2 ADGGGGGGTGAVGGGGTSQASAGAATGATGASGGGGPIN 40
A G G G A + A G G G+S G G ++
Sbjct: 273 AGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSSAGYGVLS 311
Score = 25.8 bits (55), Expect = 9.9
Identities = 13/31 (41%), Positives = 14/31 (45%)
Query: 5 GGGGGTGAVGGGGTSQASAGAATGATGASGG 35
GGGGG AV SA A+G G G
Sbjct: 161 GGGGGPAAVPEFNNYYGSAAPASGGPGGRAG 191
Score = 25.8 bits (55), Expect = 9.9
Identities = 19/60 (31%), Positives = 26/60 (43%), Gaps = 1/60 (1%)
Query: 5 GGGGGTGAVGGGGTSQASAGAATGATGASG-GGGPINPASLPPGDPQLIALIVEQLKSRG 63
GGG G GGG S + A A + A G G +P+ P QL+ ++S G
Sbjct: 317 GGGMMMGPGGGGAASLSKAAAGSAAGGFQRFAGQNQHPSGATPTLNQLLTSPSPMMRSYG 376
>gi|40068462 AT rich interactive domain 1B (SWI1-like) isoform 3
[Homo sapiens]
Length = 2178
Score = 42.0 bits (97), Expect = 1e-04
Identities = 20/34 (58%), Positives = 22/34 (64%)
Query: 4 GGGGGGTGAVGGGGTSQASAGAATGATGASGGGG 37
GGGGGG GA GG + A A AA A A+GGGG
Sbjct: 263 GGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGG 296
Score = 42.0 bits (97), Expect = 1e-04
Identities = 19/34 (55%), Positives = 21/34 (61%)
Query: 4 GGGGGGTGAVGGGGTSQASAGAATGATGASGGGG 37
GGGGGG GA G G + A+A AA A GGGG
Sbjct: 265 GGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGG 298
Score = 41.6 bits (96), Expect = 2e-04
Identities = 18/34 (52%), Positives = 19/34 (55%)
Query: 4 GGGGGGTGAVGGGGTSQASAGAATGATGASGGGG 37
GGGGGG GG G +A AA A A GGGG
Sbjct: 264 GGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGG 297
Score = 39.7 bits (91), Expect = 7e-04
Identities = 17/33 (51%), Positives = 19/33 (57%)
Query: 4 GGGGGGTGAVGGGGTSQASAGAATGATGASGGG 36
GGGG G G G G + A+A AA A G GGG
Sbjct: 267 GGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGG 299
Score = 37.0 bits (84), Expect = 0.004
Identities = 16/31 (51%), Positives = 17/31 (54%)
Query: 5 GGGGGTGAVGGGGTSQASAGAATGATGASGG 35
GGGGG G GGGG+ G GA GA G
Sbjct: 249 GGGGGGGGGGGGGSGGGGGGGGAGAGGAGAG 279
Score = 35.0 bits (79), Expect = 0.016
Identities = 18/34 (52%), Positives = 19/34 (55%), Gaps = 2/34 (5%)
Query: 4 GGGGGGTGAVGGGGTSQASAGAATGATGASGGGG 37
GGG G GA G G A+A AA A G GGGG
Sbjct: 268 GGGAGAGGA--GAGAVAAAAAAAAAAAGGGGGGG 299
Score = 34.7 bits (78), Expect = 0.021
Identities = 15/33 (45%), Positives = 16/33 (48%)
Query: 4 GGGGGGTGAVGGGGTSQASAGAATGATGASGGG 36
G GGGG G GGGG S G G +G G
Sbjct: 247 GAGGGGGGGGGGGGGSGGGGGGGGAGAGGAGAG 279
Score = 33.5 bits (75), Expect = 0.048
Identities = 15/39 (38%), Positives = 17/39 (43%)
Query: 5 GGGGGTGAVGGGGTSQASAGAATGATGASGGGGPINPAS 43
G GGG G GGGG G GA G G + A+
Sbjct: 247 GAGGGGGGGGGGGGGSGGGGGGGGAGAGGAGAGAVAAAA 285
Score = 26.6 bits (57), Expect = 5.8
Identities = 15/37 (40%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Query: 2 ADGGGGGGTGAVGGG-GTSQASAGAATGATGASGGGG 37
A GGGGGG G G G + G GGGG
Sbjct: 292 AGGGGGGGYGGSSAGYGVLSSPRQQGGGMMMGPGGGG 328
Score = 26.2 bits (56), Expect = 7.6
Identities = 12/39 (30%), Positives = 16/39 (41%)
Query: 2 ADGGGGGGTGAVGGGGTSQASAGAATGATGASGGGGPIN 40
A G G G A + A G G G+S G G ++
Sbjct: 273 AGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSSAGYGVLS 311
Score = 25.8 bits (55), Expect = 9.9
Identities = 13/31 (41%), Positives = 14/31 (45%)
Query: 5 GGGGGTGAVGGGGTSQASAGAATGATGASGG 35
GGGGG AV SA A+G G G
Sbjct: 161 GGGGGPAAVPEFNNYYGSAAPASGGPGGRAG 191
Score = 25.8 bits (55), Expect = 9.9
Identities = 19/60 (31%), Positives = 26/60 (43%), Gaps = 1/60 (1%)
Query: 5 GGGGGTGAVGGGGTSQASAGAATGATGASG-GGGPINPASLPPGDPQLIALIVEQLKSRG 63
GGG G GGG S + A A + A G G +P+ P QL+ ++S G
Sbjct: 317 GGGMMMGPGGGGAASLSKAAAGSAAGGFQRFAGQNQHPSGATPTLNQLLTSPSPMMRSYG 376
>gi|109452587 family with sequence similarity 98, member B isoform 1
[Homo sapiens]
Length = 433
Score = 41.6 bits (96), Expect = 2e-04
Identities = 18/34 (52%), Positives = 18/34 (52%)
Query: 4 GGGGGGTGAVGGGGTSQASAGAATGATGASGGGG 37
GGGGGG G GGGG G G G GGGG
Sbjct: 350 GGGGGGRGGWGGGGGGWGGGGGGGGGWGGGGGGG 383
Score = 38.9 bits (89), Expect = 0.001
Identities = 18/34 (52%), Positives = 18/34 (52%)
Query: 4 GGGGGGTGAVGGGGTSQASAGAATGATGASGGGG 37
GGGGGG G GGGG G G G GGGG
Sbjct: 341 GGGGGGRGGGGGGGGRGGWGGGGGGWGGGGGGGG 374
Score = 38.1 bits (87), Expect = 0.002
Identities = 17/34 (50%), Positives = 18/34 (52%)
Query: 4 GGGGGGTGAVGGGGTSQASAGAATGATGASGGGG 37
GGGGGG GGGG + G G G GGGG
Sbjct: 340 GGGGGGGRGGGGGGGGRGGWGGGGGGWGGGGGGG 373
Score = 36.2 bits (82), Expect = 0.007
Identities = 17/33 (51%), Positives = 17/33 (51%)
Query: 5 GGGGGTGAVGGGGTSQASAGAATGATGASGGGG 37
GGGGG G GGGG G G G GGGG
Sbjct: 339 GGGGGGGGRGGGGGGGGRGGWGGGGGGWGGGGG 371
Score = 35.4 bits (80), Expect = 0.013
Identities = 16/35 (45%), Positives = 18/35 (51%)
Query: 3 DGGGGGGTGAVGGGGTSQASAGAATGATGASGGGG 37
+GGGG G GGGG + G G G GGGG
Sbjct: 330 EGGGGRGGWGGGGGGGGRGGGGGGGGRGGWGGGGG 364
Score = 33.5 bits (75), Expect = 0.048
Identities = 15/33 (45%), Positives = 15/33 (45%)
Query: 4 GGGGGGTGAVGGGGTSQASAGAATGATGASGGG 36
GG GG G GGGG G G G GGG
Sbjct: 333 GGRGGWGGGGGGGGRGGGGGGGGRGGWGGGGGG 365
Score = 33.5 bits (75), Expect = 0.048
Identities = 16/34 (47%), Positives = 16/34 (47%)
Query: 4 GGGGGGTGAVGGGGTSQASAGAATGATGASGGGG 37
GGGGGG G GGGG G G GG G
Sbjct: 370 GGGGGGWGGGGGGGRGGFQGRGDYGGRGGYGGRG 403
Score = 33.1 bits (74), Expect = 0.062
Identities = 15/33 (45%), Positives = 15/33 (45%)
Query: 5 GGGGGTGAVGGGGTSQASAGAATGATGASGGGG 37
GG GG G GG G G G G GGGG
Sbjct: 397 GGYGGRGGYGGRGYGDPYGGGGGGGGGGGGGGG 429
Score = 32.7 bits (73), Expect = 0.081
Identities = 15/33 (45%), Positives = 15/33 (45%)
Query: 4 GGGGGGTGAVGGGGTSQASAGAATGATGASGGG 36
GGGG G G GGG G G G GGG
Sbjct: 343 GGGGRGGGGGGGGRGGWGGGGGGWGGGGGGGGG 375
Score = 32.7 bits (73), Expect = 0.081
Identities = 16/34 (47%), Positives = 16/34 (47%)
Query: 4 GGGGGGTGAVGGGGTSQASAGAATGATGASGGGG 37
GGGGGG G GGGG G G GG G
Sbjct: 367 GGGGGGGGGWGGGGGGGRGGFQGRGDYGGRGGYG 400
Score = 32.0 bits (71), Expect = 0.14
Identities = 15/34 (44%), Positives = 15/34 (44%)
Query: 4 GGGGGGTGAVGGGGTSQASAGAATGATGASGGGG 37
GGG GG G GGG G G G G GG
Sbjct: 353 GGGRGGWGGGGGGWGGGGGGGGGWGGGGGGGRGG 386
Score = 30.8 bits (68), Expect = 0.31
Identities = 15/34 (44%), Positives = 15/34 (44%)
Query: 4 GGGGGGTGAVGGGGTSQASAGAATGATGASGGGG 37
GGGG G G GGGG G G G GG
Sbjct: 362 GGGGWGGGGGGGGGWGGGGGGGRGGFQGRGDYGG 395
Score = 30.8 bits (68), Expect = 0.31
Identities = 18/46 (39%), Positives = 19/46 (41%)
Query: 4 GGGGGGTGAVGGGGTSQASAGAATGATGASGGGGPINPASLPPGDP 49
GGGGGG G GGGG + G G GG GDP
Sbjct: 368 GGGGGGGGWGGGGGGGRGGFQGRGDYGGRGGYGGRGGYGGRGYGDP 413
Score = 29.3 bits (64), Expect = 0.90
Identities = 16/36 (44%), Positives = 16/36 (44%), Gaps = 1/36 (2%)
Query: 3 DGGGGGGTGAVGG-GGTSQASAGAATGATGASGGGG 37
D GG GG G GG GG G G GGGG
Sbjct: 392 DYGGRGGYGGRGGYGGRGYGDPYGGGGGGGGGGGGG 427
Score = 28.1 bits (61), Expect = 2.0
Identities = 14/32 (43%), Positives = 14/32 (43%)
Query: 5 GGGGGTGAVGGGGTSQASAGAATGATGASGGG 36
GGGGG GGGG G G G G G
Sbjct: 360 GGGGGGWGGGGGGGGGWGGGGGGGRGGFQGRG 391
Score = 28.1 bits (61), Expect = 2.0
Identities = 11/14 (78%), Positives = 11/14 (78%)
Query: 4 GGGGGGTGAVGGGG 17
GGGGGG G GGGG
Sbjct: 415 GGGGGGGGGGGGGG 428
Score = 28.1 bits (61), Expect = 2.0
Identities = 11/14 (78%), Positives = 11/14 (78%)
Query: 4 GGGGGGTGAVGGGG 17
GGGGGG G GGGG
Sbjct: 416 GGGGGGGGGGGGGG 429
Score = 27.7 bits (60), Expect = 2.6
Identities = 14/34 (41%), Positives = 14/34 (41%)
Query: 4 GGGGGGTGAVGGGGTSQASAGAATGATGASGGGG 37
GGGGG G GGGG G G G G
Sbjct: 361 GGGGGWGGGGGGGGGWGGGGGGGRGGFQGRGDYG 394
>gi|73427806 v-maf musculoaponeurotic fibrosarcoma oncogene homolog
isoform b [Homo sapiens]
Length = 373
Score = 41.2 bits (95), Expect = 2e-04
Identities = 24/66 (36%), Positives = 31/66 (46%), Gaps = 12/66 (18%)
Query: 2 ADGGGGGGTGAVGGGGTSQASAGAATGATGASGGGGPINPASLPPG--------DPQLIA 53
A G GGGG + GGGG G G GA+G GG ++P G D QL+
Sbjct: 213 AGGAGGGGPASAGGGG----GGGGGGGGGGAAGAGGALHPHHAAGGLHFDDRFSDEQLVT 268
Query: 54 LIVEQL 59
+ V +L
Sbjct: 269 MSVREL 274
Score = 31.2 bits (69), Expect = 0.24
Identities = 14/36 (38%), Positives = 15/36 (41%)
Query: 2 ADGGGGGGTGAVGGGGTSQASAGAATGATGASGGGG 37
A G G+ A GG A G A G GGGG
Sbjct: 197 AGAPGAAGSAAASAGGAGGAGGGGPASAGGGGGGGG 232
Score = 30.8 bits (68), Expect = 0.31
Identities = 13/36 (36%), Positives = 16/36 (44%)
Query: 2 ADGGGGGGTGAVGGGGTSQASAGAATGATGASGGGG 37
A G G + GG G + A+ G G GGGG
Sbjct: 199 APGAAGSAAASAGGAGGAGGGGPASAGGGGGGGGGG 234
Score = 30.4 bits (67), Expect = 0.40
Identities = 16/28 (57%), Positives = 18/28 (64%), Gaps = 4/28 (14%)
Query: 11 GAVGGGGTSQASAGAATGATGASGGGGP 38
GA G G++ ASAG A GA GGGGP
Sbjct: 198 GAPGAAGSAAASAGGAGGA----GGGGP 221
>gi|5453736 v-maf musculoaponeurotic fibrosarcoma oncogene homolog
isoform a [Homo sapiens]
Length = 403
Score = 41.2 bits (95), Expect = 2e-04
Identities = 24/66 (36%), Positives = 31/66 (46%), Gaps = 12/66 (18%)
Query: 2 ADGGGGGGTGAVGGGGTSQASAGAATGATGASGGGGPINPASLPPG--------DPQLIA 53
A G GGGG + GGGG G G GA+G GG ++P G D QL+
Sbjct: 213 AGGAGGGGPASAGGGG----GGGGGGGGGGAAGAGGALHPHHAAGGLHFDDRFSDEQLVT 268
Query: 54 LIVEQL 59
+ V +L
Sbjct: 269 MSVREL 274
Score = 31.2 bits (69), Expect = 0.24
Identities = 14/36 (38%), Positives = 15/36 (41%)
Query: 2 ADGGGGGGTGAVGGGGTSQASAGAATGATGASGGGG 37
A G G+ A GG A G A G GGGG
Sbjct: 197 AGAPGAAGSAAASAGGAGGAGGGGPASAGGGGGGGG 232
Score = 30.8 bits (68), Expect = 0.31
Identities = 13/36 (36%), Positives = 16/36 (44%)
Query: 2 ADGGGGGGTGAVGGGGTSQASAGAATGATGASGGGG 37
A G G + GG G + A+ G G GGGG
Sbjct: 199 APGAAGSAAASAGGAGGAGGGGPASAGGGGGGGGGG 234
Score = 30.4 bits (67), Expect = 0.40
Identities = 16/28 (57%), Positives = 18/28 (64%), Gaps = 4/28 (14%)
Query: 11 GAVGGGGTSQASAGAATGATGASGGGGP 38
GA G G++ ASAG A GA GGGGP
Sbjct: 198 GAPGAAGSAAASAGGAGGA----GGGGP 221
>gi|4885597 sine oculis homeobox homolog 3 [Homo sapiens]
Length = 332
Score = 40.8 bits (94), Expect = 3e-04
Identities = 24/68 (35%), Positives = 30/68 (44%), Gaps = 7/68 (10%)
Query: 3 DGGGGGGTGAVGGGGTSQASAGAATGATGASGGGGPINPASLP-------PGDPQLIALI 55
+G GGGG G GG + A G A GA G GGG P L P+ +A +
Sbjct: 36 NGAGGGGGAGGGSGGGNGAGGGGAGGAGGGGGGGSRAPPEELSMFQLPTLNFSPEQVASV 95
Query: 56 VEQLKSRG 63
E L+ G
Sbjct: 96 CETLEETG 103
>gi|51702521 POU domain, class 3, transcription factor 2 [Homo
sapiens]
Length = 443
Score = 40.0 bits (92), Expect = 5e-04
Identities = 25/64 (39%), Positives = 30/64 (46%), Gaps = 14/64 (21%)
Query: 1 MADGGGGGGTGAVGGGGTSQASAGAATGATGASGGGGPINPASLPP-GDPQLIALIVEQL 59
++ GGGGGG G GGGG G GGGG +P S P G P + +V Q
Sbjct: 65 LSHGGGGGGGGGGGGGG-------------GGGGGGGDGSPWSTSPLGQPDIKPSVVVQQ 111
Query: 60 KSRG 63
RG
Sbjct: 112 GGRG 115
>gi|45439359 triple functional domain (PTPRF interacting) [Homo
sapiens]
Length = 3097
Score = 40.0 bits (92), Expect = 5e-04
Identities = 22/52 (42%), Positives = 24/52 (46%), Gaps = 5/52 (9%)
Query: 4 GGGGGGTGAVGGGGTSQASAGAATGATGASG-----GGGPINPASLPPGDPQ 50
GGGGGG GGG GA +G +G SG GG P S P PQ
Sbjct: 2292 GGGGGGGSGGSGGGGGSGGGGAPSGGSGHSGGPSSCGGAPSTSRSRPSRIPQ 2343
Score = 27.7 bits (60), Expect = 2.6
Identities = 11/27 (40%), Positives = 15/27 (55%)
Query: 10 TGAVGGGGTSQASAGAATGATGASGGG 36
+G GGGG+ + G +G GA GG
Sbjct: 2291 SGGGGGGGSGGSGGGGGSGGGGAPSGG 2317
>gi|154091020 leucine-rich repeats and calponin homology (CH)
domain containing 2 [Homo sapiens]
Length = 765
Score = 39.7 bits (91), Expect = 7e-04
Identities = 18/34 (52%), Positives = 19/34 (55%)
Query: 4 GGGGGGTGAVGGGGTSQASAGAATGATGASGGGG 37
GGG G G GGGG+S A G GA GGGG
Sbjct: 7 GGGNSGGGGCGGGGSSGGCGTAGGGGGGAGGGGG 40
Score = 37.4 bits (85), Expect = 0.003
Identities = 23/61 (37%), Positives = 25/61 (40%), Gaps = 18/61 (29%)
Query: 4 GGGGGGTGAVGGGGTSQASAGAATGATGASGG------------------GGPINPASLP 45
GGG GG G+ GG GT+ G A G G GG G P NP SL
Sbjct: 13 GGGCGGGGSSGGCGTAGGGGGGAGGGGGGGGGTLVVPIPVPTLFGQPFPNGPPWNPGSLQ 72
Query: 46 P 46
P
Sbjct: 73 P 73
Score = 34.7 bits (78), Expect = 0.021
Identities = 16/42 (38%), Positives = 19/42 (45%)
Query: 4 GGGGGGTGAVGGGGTSQASAGAATGATGASGGGGPINPASLP 45
GGGG G G GG + G G G GGG + P +P
Sbjct: 12 GGGGCGGGGSSGGCGTAGGGGGGAGGGGGGGGGTLVVPIPVP 53
>gi|4502565 calpain, small subunit 1 [Homo sapiens]
Length = 268
Score = 39.7 bits (91), Expect = 7e-04
Identities = 18/34 (52%), Positives = 19/34 (55%)
Query: 4 GGGGGGTGAVGGGGTSQASAGAATGATGASGGGG 37
GGGGGG G GGG G +GA G GGGG
Sbjct: 11 GGGGGGGGGGLGGGLGNVLGGLISGAGGGGGGGG 44
Score = 35.4 bits (80), Expect = 0.013
Identities = 18/34 (52%), Positives = 18/34 (52%)
Query: 4 GGGGGGTGAVGGGGTSQASAGAATGATGASGGGG 37
GG GGG G V GG S A G G G GGGG
Sbjct: 19 GGLGGGLGNVLGGLISGAGGGGGGGGGGGGGGGG 52
Score = 35.4 bits (80), Expect = 0.013
Identities = 19/43 (44%), Positives = 20/43 (46%), Gaps = 2/43 (4%)
Query: 4 GGGGGGTGAVGGGGTSQASAGAATGATGASGGGGPINPASLPP 46
GGGGGG G GGGGT+ G A S NP PP
Sbjct: 43 GGGGGGGGGGGGGGTAMRILGGVISA--ISEAAAQYNPEPPPP 83
Score = 33.1 bits (74), Expect = 0.062
Identities = 17/42 (40%), Positives = 19/42 (45%), Gaps = 8/42 (19%)
Query: 4 GGGGGGTGAVGGGG--------TSQASAGAATGATGASGGGG 37
GGGGGG G +GGG + G G G GGGG
Sbjct: 12 GGGGGGGGGLGGGLGNVLGGLISGAGGGGGGGGGGGGGGGGG 53
Score = 28.9 bits (63), Expect = 1.2
Identities = 17/43 (39%), Positives = 19/43 (44%), Gaps = 4/43 (9%)
Query: 1 MADGGGGGGTGAVGGGGTSQASAGAATGATGASGGGGPINPAS 43
+ G GGGG G GGGG G G T GG I+ S
Sbjct: 32 LISGAGGGGGGGGGGGG----GGGGGGGGTAMRILGGVISAIS 70
>gi|51599151 calpain, small subunit 1 [Homo sapiens]
Length = 268
Score = 39.7 bits (91), Expect = 7e-04
Identities = 18/34 (52%), Positives = 19/34 (55%)
Query: 4 GGGGGGTGAVGGGGTSQASAGAATGATGASGGGG 37
GGGGGG G GGG G +GA G GGGG
Sbjct: 11 GGGGGGGGGGLGGGLGNVLGGLISGAGGGGGGGG 44
Score = 35.4 bits (80), Expect = 0.013
Identities = 18/34 (52%), Positives = 18/34 (52%)
Query: 4 GGGGGGTGAVGGGGTSQASAGAATGATGASGGGG 37
GG GGG G V GG S A G G G GGGG
Sbjct: 19 GGLGGGLGNVLGGLISGAGGGGGGGGGGGGGGGG 52
Score = 35.4 bits (80), Expect = 0.013
Identities = 19/43 (44%), Positives = 20/43 (46%), Gaps = 2/43 (4%)
Query: 4 GGGGGGTGAVGGGGTSQASAGAATGATGASGGGGPINPASLPP 46
GGGGGG G GGGGT+ G A S NP PP
Sbjct: 43 GGGGGGGGGGGGGGTAMRILGGVISA--ISEAAAQYNPEPPPP 83
Score = 33.1 bits (74), Expect = 0.062
Identities = 17/42 (40%), Positives = 19/42 (45%), Gaps = 8/42 (19%)
Query: 4 GGGGGGTGAVGGGG--------TSQASAGAATGATGASGGGG 37
GGGGGG G +GGG + G G G GGGG
Sbjct: 12 GGGGGGGGGLGGGLGNVLGGLISGAGGGGGGGGGGGGGGGGG 53
Score = 28.9 bits (63), Expect = 1.2
Identities = 17/43 (39%), Positives = 19/43 (44%), Gaps = 4/43 (9%)
Query: 1 MADGGGGGGTGAVGGGGTSQASAGAATGATGASGGGGPINPAS 43
+ G GGGG G GGGG G G T GG I+ S
Sbjct: 32 LISGAGGGGGGGGGGGG----GGGGGGGGTAMRILGGVISAIS 70
>gi|33620755 YEATS domain containing 2 [Homo sapiens]
Length = 1422
Score = 39.7 bits (91), Expect = 7e-04
Identities = 17/34 (50%), Positives = 20/34 (58%)
Query: 4 GGGGGGTGAVGGGGTSQASAGAATGATGASGGGG 37
G G GG G GGGG S + G +TG G + GGG
Sbjct: 800 GSGAGGGGGGGGGGGSGSGGGGSTGGGGGTAGGG 833
Score = 38.5 bits (88), Expect = 0.001
Identities = 17/37 (45%), Positives = 22/37 (59%)
Query: 4 GGGGGGTGAVGGGGTSQASAGAATGATGASGGGGPIN 40
GGGGGG GGGG++ G A G T ++ G G I+
Sbjct: 808 GGGGGGGSGSGGGGSTGGGGGTAGGGTQSTAGPGGIS 844
Score = 36.6 bits (83), Expect = 0.006
Identities = 17/35 (48%), Positives = 20/35 (57%), Gaps = 4/35 (11%)
Query: 2 ADGGGGGGTGAVGGGGTSQASAGAATGATGASGGG 36
A GGGGGG GGGG+ G+ G G +GGG
Sbjct: 803 AGGGGGGG----GGGGSGSGGGGSTGGGGGTAGGG 833
Score = 33.1 bits (74), Expect = 0.062
Identities = 16/36 (44%), Positives = 20/36 (55%), Gaps = 4/36 (11%)
Query: 2 ADGGGGGGTGAVGGGGTSQASAGAATGATGASGGGG 37
A GG G G GGGG G+ +G G++GGGG
Sbjct: 796 AASGGSGAGGGGGGGG----GGGSGSGGGGSTGGGG 827
>gi|53829370 neuralized homolog 4 isoform 1 [Homo sapiens]
Length = 1562
Score = 39.3 bits (90), Expect = 9e-04
Identities = 16/38 (42%), Positives = 22/38 (57%)
Query: 4 GGGGGGTGAVGGGGTSQASAGAATGATGASGGGGPINP 41
GG GGG G GGG + +G+ G+ G G GG ++P
Sbjct: 9 GGSGGGPGPGPGGGGGPSGSGSGPGSNGGLGSGGELHP 46
>gi|53829368 neuralized homolog 4 isoform 2 [Homo sapiens]
Length = 1560
Score = 39.3 bits (90), Expect = 9e-04
Identities = 16/38 (42%), Positives = 22/38 (57%)
Query: 4 GGGGGGTGAVGGGGTSQASAGAATGATGASGGGGPINP 41
GG GGG G GGG + +G+ G+ G G GG ++P
Sbjct: 9 GGSGGGPGPGPGGGGGPSGSGSGPGSNGGLGSGGELHP 46
>gi|210147522 zinc finger, SWIM-type containing 6 [Homo sapiens]
Length = 1215
Score = 39.3 bits (90), Expect = 9e-04
Identities = 21/52 (40%), Positives = 27/52 (51%), Gaps = 3/52 (5%)
Query: 3 DGGGGGGTGAVGGGGTSQ---ASAGAATGATGASGGGGPINPASLPPGDPQL 51
D GGGGG G GGGG+S A++ AAT A A+ A+ G P +
Sbjct: 140 DSGGGGGAGGGGGGGSSSSPAATSAAATSAAAAAAAAAAAAAAAAGAGAPSV 191
Score = 37.4 bits (85), Expect = 0.003
Identities = 22/54 (40%), Positives = 26/54 (48%), Gaps = 7/54 (12%)
Query: 4 GGGGGGTGAVGGGGTSQASAGAAT-------GATGASGGGGPINPASLPPGDPQ 50
GGGGGG G+ GGGG + +A GA A+ GG LPPG Q
Sbjct: 19 GGGGGGGGSSGGGGGAGGGYSSACRPGPRAGGAAAAAACGGGAALGLLPPGKTQ 72
Score = 31.2 bits (69), Expect = 0.24
Identities = 17/39 (43%), Positives = 20/39 (51%), Gaps = 4/39 (10%)
Query: 2 ADGGGGGGT----GAVGGGGTSQASAGAATGATGASGGG 36
A GGGGGG+ A TS A+A AA A A+ G
Sbjct: 147 AGGGGGGGSSSSPAATSAAATSAAAAAAAAAAAAAAAAG 185
Score = 28.9 bits (63), Expect = 1.2
Identities = 15/35 (42%), Positives = 17/35 (48%), Gaps = 3/35 (8%)
Query: 9 GTGAVGGGGTSQASAGAATGATGASGGGGPINPAS 43
G GA GG G G GA G GGG +PA+
Sbjct: 130 GGGAAGGPGDDSGGGG---GAGGGGGGGSSSSPAA 161
>gi|13994190 frizzled 8 [Homo sapiens]
Length = 694
Score = 38.9 bits (89), Expect = 0.001
Identities = 18/38 (47%), Positives = 19/38 (50%)
Query: 2 ADGGGGGGTGAVGGGGTSQASAGAATGATGASGGGGPI 39
A GGG G T A GGGG G G G GGGG +
Sbjct: 628 AVGGGAGATAAGGGGGPGGGGGGGPGGGGGPGGGGGSL 665
Score = 35.8 bits (81), Expect = 0.010
Identities = 17/37 (45%), Positives = 19/37 (51%)
Query: 1 MADGGGGGGTGAVGGGGTSQASAGAATGATGASGGGG 37
+A GG G G GG G + A AGAA G GG G
Sbjct: 338 VACSGGAPGAGGAGGAGGAAAGAGAAGAGAGGPGGRG 374
Score = 30.4 bits (67), Expect = 0.40
Identities = 16/43 (37%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Query: 4 GGGGGGTGAVGGGGTSQASAGAATGATGASGGGGPIN-PASLP 45
GGGG G G GGG + +TG T SG ++ P +P
Sbjct: 648 GGGGPGGGGGPGGGGGSLYSDVSTGLTWRSGTASSVSYPKQMP 690
Score = 29.6 bits (65), Expect = 0.69
Identities = 14/28 (50%), Positives = 15/28 (53%), Gaps = 1/28 (3%)
Query: 11 GAVGGGGTSQASAGAATGATGASGGGGP 38
GA GGG +AG G G GGGGP
Sbjct: 626 GAAVGGGAGATAAGGG-GGPGGGGGGGP 652
Score = 28.5 bits (62), Expect = 1.5
Identities = 13/27 (48%), Positives = 14/27 (51%)
Query: 21 ASAGAATGATGASGGGGPINPASLPPG 47
A+ G GAT A GGGGP PG
Sbjct: 627 AAVGGGAGATAAGGGGGPGGGGGGGPG 653
Score = 27.7 bits (60), Expect = 2.6
Identities = 12/28 (42%), Positives = 13/28 (46%)
Query: 11 GAVGGGGTSQASAGAATGATGASGGGGP 38
GA G GG A AA +G GGP
Sbjct: 343 GAPGAGGAGGAGGAAAGAGAAGAGAGGP 370
Score = 25.8 bits (55), Expect = 9.9
Identities = 11/23 (47%), Positives = 12/23 (52%)
Query: 2 ADGGGGGGTGAVGGGGTSQASAG 24
A GGGGGG GGG + G
Sbjct: 209 ARGGGGGGKARPPGGGAAPCEPG 231
>gi|109255251 loricrin [Homo sapiens]
Length = 312
Score = 38.5 bits (88), Expect = 0.001
Identities = 18/36 (50%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
Query: 4 GGGGGGTGAVGGGGTSQASAGAATGATGASG--GGG 37
G GGGG G GGGG+ S+G+ G +G G GGG
Sbjct: 28 GSGGGGCGFFGGGGSGGGSSGSGCGYSGGGGYSGGG 63
Score = 37.4 bits (85), Expect = 0.003
Identities = 16/36 (44%), Positives = 21/36 (58%)
Query: 2 ADGGGGGGTGAVGGGGTSQASAGAATGATGASGGGG 37
+ GGGG G + GGGG+S +G + G S GGG
Sbjct: 105 SSGGGGSGCFSSGGGGSSGGGSGCFSSGGGGSSGGG 140
Score = 35.8 bits (81), Expect = 0.010
Identities = 18/38 (47%), Positives = 22/38 (57%), Gaps = 4/38 (10%)
Query: 4 GGGGGGTGAVGGG----GTSQASAGAATGATGASGGGG 37
GGGGGG G+ GGG G + G++ G SGGGG
Sbjct: 21 GGGGGGGGSGGGGCGFFGGGGSGGGSSGSGCGYSGGGG 58
Score = 34.7 bits (78), Expect = 0.021
Identities = 16/34 (47%), Positives = 19/34 (55%)
Query: 4 GGGGGGTGAVGGGGTSQASAGAATGATGASGGGG 37
GG GGG+ GGGG G + G+ SGGGG
Sbjct: 62 GGCGGGSSGGGGGGGIGGCGGGSGGSVKYSGGGG 95
Score = 34.7 bits (78), Expect = 0.021
Identities = 17/40 (42%), Positives = 20/40 (50%), Gaps = 6/40 (15%)
Query: 4 GGGGGGTGAVGGGGTSQASAGAATGATG------ASGGGG 37
GGGGGG G GGG G++G +SGGGG
Sbjct: 71 GGGGGGIGGCGGGSGGSVKYSGGGGSSGGGSGCFSSGGGG 110
Score = 33.5 bits (75), Expect = 0.048
Identities = 15/42 (35%), Positives = 21/42 (50%)
Query: 6 GGGGTGAVGGGGTSQASAGAATGATGASGGGGPINPASLPPG 47
GGG +G G GG+ S+G G++G GG I + G
Sbjct: 226 GGGSSGGGGSGGSGCFSSGGGGGSSGCGGGSSGIGSGCIISG 267
Score = 33.1 bits (74), Expect = 0.062
Identities = 16/34 (47%), Positives = 18/34 (52%), Gaps = 2/34 (5%)
Query: 4 GGGGGGTGAVGGGGTSQASAGAATGATGASGGGG 37
G G G G GGGG S G G++G GGGG
Sbjct: 45 GSSGSGCGYSGGGGYS--GGGCGGGSSGGGGGGG 76
Score = 32.7 bits (73), Expect = 0.081
Identities = 14/31 (45%), Positives = 18/31 (58%)
Query: 6 GGGGTGAVGGGGTSQASAGAATGATGASGGG 36
GGGG G +GG G + +G G+SGGG
Sbjct: 70 GGGGGGGIGGCGGGSGGSVKYSGGGGSSGGG 100
Score = 32.0 bits (71), Expect = 0.14
Identities = 14/32 (43%), Positives = 16/32 (50%)
Query: 5 GGGGGTGAVGGGGTSQASAGAATGATGASGGG 36
GGGG +G GGG+S G G G GG
Sbjct: 55 GGGGYSGGGCGGGSSGGGGGGGIGGCGGGSGG 86
Score = 32.0 bits (71), Expect = 0.14
Identities = 16/38 (42%), Positives = 20/38 (52%), Gaps = 5/38 (13%)
Query: 5 GGGGGTGAVGGGGTSQA-----SAGAATGATGASGGGG 37
GGGGG+ GGG + S G + G+SGGGG
Sbjct: 244 GGGGGSSGCGGGSSGIGSGCIISGGGSVCGGGSSGGGG 281
Score = 31.6 bits (70), Expect = 0.18
Identities = 14/32 (43%), Positives = 15/32 (46%)
Query: 4 GGGGGGTGAVGGGGTSQASAGAATGATGASGG 35
GGGG G GGG + G G G SGG
Sbjct: 55 GGGGYSGGGCGGGSSGGGGGGGIGGCGGGSGG 86
Score = 31.6 bits (70), Expect = 0.18
Identities = 14/35 (40%), Positives = 19/35 (54%)
Query: 2 ADGGGGGGTGAVGGGGTSQASAGAATGATGASGGG 36
+ GGG G + GGGG+ +G +G G S GG
Sbjct: 169 SSGGGSGCFSSGGGGGSVCGYSGGGSGCGGGSSGG 203
Score = 31.2 bits (69), Expect = 0.24
Identities = 17/38 (44%), Positives = 23/38 (60%), Gaps = 5/38 (13%)
Query: 5 GGGGGTGAVGGGGT---SQASAGAATGATG--ASGGGG 37
GGG G + GGGG+ S G++ G +G +SGGGG
Sbjct: 98 GGGSGCFSSGGGGSGCFSSGGGGSSGGGSGCFSSGGGG 135
Score = 30.8 bits (68), Expect = 0.31
Identities = 14/34 (41%), Positives = 17/34 (50%)
Query: 4 GGGGGGTGAVGGGGTSQASAGAATGATGASGGGG 37
GGG GG + GGGG G +G + GGG
Sbjct: 61 GGGCGGGSSGGGGGGGIGGCGGGSGGSVKYSGGG 94
Score = 30.8 bits (68), Expect = 0.31
Identities = 16/38 (42%), Positives = 19/38 (50%), Gaps = 4/38 (10%)
Query: 4 GGGGGGTGAVGGGGTSQASAGAATGATGASG----GGG 37
GG GG GGGG+S +G + G SG GGG
Sbjct: 82 GGSGGSVKYSGGGGSSGGGSGCFSSGGGGSGCFSSGGG 119
Score = 30.8 bits (68), Expect = 0.31
Identities = 15/34 (44%), Positives = 20/34 (58%), Gaps = 2/34 (5%)
Query: 6 GGGGTGAVGGGGTSQASAGAATGATG--ASGGGG 37
GGGG+ G G S G++ G +G +SGGGG
Sbjct: 117 GGGGSSGGGSGCFSSGGGGSSGGGSGCFSSGGGG 150
Score = 30.8 bits (68), Expect = 0.31
Identities = 18/57 (31%), Positives = 26/57 (45%), Gaps = 11/57 (19%)
Query: 2 ADGGGGGGTGAVGGGGTSQASAGAAT---------GATGASGGGGPINPASLPPGDP 49
+ GGGGG +G GGG+S +G G++G GGG + + G P
Sbjct: 242 SSGGGGGSSGC--GGGSSGIGSGCIISGGGSVCGGGSSGGGGGGSSVGGSGSGKGVP 296
Score = 30.4 bits (67), Expect = 0.40
Identities = 14/34 (41%), Positives = 17/34 (50%)
Query: 4 GGGGGGTGAVGGGGTSQASAGAATGATGASGGGG 37
GG GG G+ G G S G ++G G S G G
Sbjct: 227 GGSSGGGGSGGSGCFSSGGGGGSSGCGGGSSGIG 260
Score = 29.6 bits (65), Expect = 0.69
Identities = 15/40 (37%), Positives = 20/40 (50%), Gaps = 7/40 (17%)
Query: 4 GGGGGGT-------GAVGGGGTSQASAGAATGATGASGGG 36
GGG GG+ G+ GGG +S G +G + GGG
Sbjct: 81 GGGSGGSVKYSGGGGSSGGGSGCFSSGGGGSGCFSSGGGG 120
Score = 29.3 bits (64), Expect = 0.90
Identities = 16/49 (32%), Positives = 22/49 (44%), Gaps = 14/49 (28%)
Query: 5 GGGGGTGAVGGGG--------------TSQASAGAATGATGASGGGGPI 39
GGG G + GGGG +S S+G +G + GGGG +
Sbjct: 138 GGGSGCFSSGGGGFSGQAVQCQSYGGVSSGGSSGGGSGCFSSGGGGGSV 186
Score = 29.3 bits (64), Expect = 0.90
Identities = 14/35 (40%), Positives = 18/35 (51%), Gaps = 5/35 (14%)
Query: 2 ADGGGGGGTGAVGGGGTSQASAGAATGATGASGGG 36
+ GGGGG GGG +G G++G SG G
Sbjct: 178 SSGGGGGSVCGYSGGG-----SGCGGGSSGGSGSG 207
Score = 28.9 bits (63), Expect = 1.2
Identities = 14/32 (43%), Positives = 15/32 (46%)
Query: 5 GGGGGTGAVGGGGTSQASAGAATGATGASGGG 36
G GG G GGG +S G G G GGG
Sbjct: 52 GYSGGGGYSGGGCGGGSSGGGGGGGIGGCGGG 83
Score = 28.9 bits (63), Expect = 1.2
Identities = 16/43 (37%), Positives = 21/43 (48%), Gaps = 9/43 (20%)
Query: 4 GGGGGGTGAVGGGGTSQASAGAATGAT---------GASGGGG 37
GG G G G+ GG G+ S+ T + G+SGGGG
Sbjct: 192 GGSGCGGGSSGGSGSGYVSSQQVTQTSCAPQPSYGGGSSGGGG 234
Score = 28.5 bits (62), Expect = 1.5
Identities = 13/33 (39%), Positives = 17/33 (51%), Gaps = 2/33 (6%)
Query: 4 GGGGGGTGAVGGGGTSQASAGAATGATGASGGG 36
G GGG+G GG S+G +G + GGG
Sbjct: 120 GSSGGGSGCFSSGG--GGSSGGGSGCFSSGGGG 150
Score = 27.3 bits (59), Expect = 3.4
Identities = 13/34 (38%), Positives = 15/34 (44%)
Query: 4 GGGGGGTGAVGGGGTSQASAGAATGATGASGGGG 37
G GGG + GG G + G G G GG G
Sbjct: 52 GYSGGGGYSGGGCGGGSSGGGGGGGIGGCGGGSG 85
Score = 26.9 bits (58), Expect = 4.5
Identities = 14/32 (43%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Query: 6 GGGGTGAVGGGGTSQASAGAATGAT-GASGGG 36
GG +G GGG+ S+G G+ G SGGG
Sbjct: 162 GGVSSGGSSGGGSGCFSSGGGGGSVCGYSGGG 193
Score = 26.2 bits (56), Expect = 7.6
Identities = 16/45 (35%), Positives = 18/45 (40%), Gaps = 11/45 (24%)
Query: 4 GGGGGGTGAVGGGGTS-----------QASAGAATGATGASGGGG 37
G GGG +G G G S Q S G + G SGG G
Sbjct: 195 GCGGGSSGGSGSGYVSSQQVTQTSCAPQPSYGGGSSGGGGSGGSG 239
Score = 25.8 bits (55), Expect = 9.9
Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 6/39 (15%)
Query: 1 MADGGGGGGTGAVGGGGTSQASAGAATGATGASGGGGPI 39
++ GG G G+ GGGG G++ G +G SG G PI
Sbjct: 265 ISGGGSVCGGGSSGGGG-----GGSSVGGSG-SGKGVPI 297
>gi|34452713 Ca2+-dependent secretion activator isoform 2 [Homo
sapiens]
Length = 1314
Score = 38.5 bits (88), Expect = 0.001
Identities = 21/45 (46%), Positives = 26/45 (57%), Gaps = 6/45 (13%)
Query: 4 GGGGGGTGA---VGGGGTSQASAGAATGA---TGASGGGGPINPA 42
GGGG G GA GGGG S AS+G G + +GGG P +P+
Sbjct: 49 GGGGAGAGAGVGAGGGGGSGASSGGGAGGLQPSSRAGGGRPSSPS 93
Score = 31.6 bits (70), Expect = 0.18
Identities = 21/49 (42%), Positives = 26/49 (53%), Gaps = 10/49 (20%)
Query: 6 GGGGTGAVGGGGTSQASAGAATGA-----TGASGGGGP--INPASLPPG 47
G G+ +GGGG A AGA GA +GAS GGG + P+S G
Sbjct: 41 GSAGSAGLGGGG---AGAGAGVGAGGGGGSGASSGGGAGGLQPSSRAGG 86
>gi|34452715 Ca2+-dependent secretion activator isoform 1 [Homo
sapiens]
Length = 1353
Score = 38.5 bits (88), Expect = 0.001
Identities = 21/45 (46%), Positives = 26/45 (57%), Gaps = 6/45 (13%)
Query: 4 GGGGGGTGA---VGGGGTSQASAGAATGA---TGASGGGGPINPA 42
GGGG G GA GGGG S AS+G G + +GGG P +P+
Sbjct: 49 GGGGAGAGAGVGAGGGGGSGASSGGGAGGLQPSSRAGGGRPSSPS 93
Score = 31.6 bits (70), Expect = 0.18
Identities = 21/49 (42%), Positives = 26/49 (53%), Gaps = 10/49 (20%)
Query: 6 GGGGTGAVGGGGTSQASAGAATGA-----TGASGGGGP--INPASLPPG 47
G G+ +GGGG A AGA GA +GAS GGG + P+S G
Sbjct: 41 GSAGSAGLGGGG---AGAGAGVGAGGGGGSGASSGGGAGGLQPSSRAGG 86
>gi|34452711 Ca2+-dependent secretion activator isoform 3 [Homo
sapiens]
Length = 1274
Score = 38.5 bits (88), Expect = 0.001
Identities = 21/45 (46%), Positives = 26/45 (57%), Gaps = 6/45 (13%)
Query: 4 GGGGGGTGA---VGGGGTSQASAGAATGA---TGASGGGGPINPA 42
GGGG G GA GGGG S AS+G G + +GGG P +P+
Sbjct: 49 GGGGAGAGAGVGAGGGGGSGASSGGGAGGLQPSSRAGGGRPSSPS 93
Score = 31.6 bits (70), Expect = 0.18
Identities = 21/49 (42%), Positives = 26/49 (53%), Gaps = 10/49 (20%)
Query: 6 GGGGTGAVGGGGTSQASAGAATGA-----TGASGGGGP--INPASLPPG 47
G G+ +GGGG A AGA GA +GAS GGG + P+S G
Sbjct: 41 GSAGSAGLGGGG---AGAGAGVGAGGGGGSGASSGGGAGGLQPSSRAGG 86
>gi|55956899 keratin 9 [Homo sapiens]
Length = 623
Score = 38.1 bits (87), Expect = 0.002
Identities = 17/34 (50%), Positives = 20/34 (58%)
Query: 4 GGGGGGTGAVGGGGTSQASAGAATGATGASGGGG 37
GG GGG G GGG S S G +G +G + GGG
Sbjct: 528 GGSGGGYGGGSGGGHSGGSGGGHSGGSGGNYGGG 561
Score = 37.0 bits (84), Expect = 0.004
Identities = 16/34 (47%), Positives = 20/34 (58%)
Query: 4 GGGGGGTGAVGGGGTSQASAGAATGATGASGGGG 37
GGGG G G GG G+ S G+ G +G+ GG G
Sbjct: 498 GGGGSGGGYGGGSGSRGGSGGSYGGGSGSGGGSG 531
Score = 35.0 bits (79), Expect = 0.016
Identities = 16/34 (47%), Positives = 18/34 (52%)
Query: 4 GGGGGGTGAVGGGGTSQASAGAATGATGASGGGG 37
GG GGG GGG S S G G +G+ GG G
Sbjct: 536 GGSGGGHSGGSGGGHSGGSGGNYGGGSGSGGGSG 569
Score = 35.0 bits (79), Expect = 0.016
Identities = 16/34 (47%), Positives = 19/34 (55%)
Query: 4 GGGGGGTGAVGGGGTSQASAGAATGATGASGGGG 37
GG GGG+G+ GG G S G +G S GGG
Sbjct: 570 GGYGGGSGSRGGSGGSHGGGSGFGGESGGSYGGG 603
Score = 34.7 bits (78), Expect = 0.021
Identities = 17/33 (51%), Positives = 21/33 (63%), Gaps = 3/33 (9%)
Query: 4 GGGGGGTGAVGGGGTSQASAGAATGATGASGGG 36
GG GGG+G+ GG G S G +G+ G SGGG
Sbjct: 504 GGYGGGSGSRGGSG---GSYGGGSGSGGGSGGG 533
Score = 34.3 bits (77), Expect = 0.028
Identities = 17/35 (48%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
Query: 4 GGGGGGTGAVGGG--GTSQASAGAATGATGASGGG 36
G GGG +G GGG G S + G +G+ G SGGG
Sbjct: 537 GSGGGHSGGSGGGHSGGSGGNYGGGSGSGGGSGGG 571
Score = 33.5 bits (75), Expect = 0.048
Identities = 15/32 (46%), Positives = 17/32 (53%)
Query: 4 GGGGGGTGAVGGGGTSQASAGAATGATGASGG 35
G GGG G GGG S G+ G +G SGG
Sbjct: 525 GSGGGSGGGYGGGSGGGHSGGSGGGHSGGSGG 556
Score = 33.1 bits (74), Expect = 0.062
Identities = 14/33 (42%), Positives = 17/33 (51%)
Query: 5 GGGGGTGAVGGGGTSQASAGAATGATGASGGGG 37
GGG G+G GGG S G +G +G GG
Sbjct: 521 GGGSGSGGGSGGGYGGGSGGGHSGGSGGGHSGG 553
Score = 33.1 bits (74), Expect = 0.062
Identities = 14/34 (41%), Positives = 18/34 (52%)
Query: 4 GGGGGGTGAVGGGGTSQASAGAATGATGASGGGG 37
G GGG+G+ GG G + G +G S GGG
Sbjct: 556 GNYGGGSGSGGGSGGGYGGGSGSRGGSGGSHGGG 589
Score = 32.0 bits (71), Expect = 0.14
Identities = 13/31 (41%), Positives = 19/31 (61%)
Query: 6 GGGGTGAVGGGGTSQASAGAATGATGASGGG 36
GGGG G +G GG+ ++S + + G GGG
Sbjct: 15 GGGGGGGLGSGGSIRSSYSRFSSSGGGGGGG 45
Score = 32.0 bits (71), Expect = 0.14
Identities = 17/33 (51%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Query: 4 GGGGGGTGAVGGGGTSQASAGAATGATGASGGG 36
GGG G G GGG S +S G G G SGGG
Sbjct: 91 GGGSRGFGGASGGGYS-SSGGFGGGFGGGSGGG 122
Score = 31.6 bits (70), Expect = 0.18
Identities = 14/33 (42%), Positives = 18/33 (54%)
Query: 4 GGGGGGTGAVGGGGTSQASAGAATGATGASGGG 36
GG GG G G GG +G+ G+ G+ GGG
Sbjct: 491 GGSGGSYGGGGSGGGYGGGSGSRGGSGGSYGGG 523
Score = 31.2 bits (69), Expect = 0.24
Identities = 17/40 (42%), Positives = 19/40 (47%)
Query: 4 GGGGGGTGAVGGGGTSQASAGAATGATGASGGGGPINPAS 43
GG GGG+G GGG G GA GG G I A+
Sbjct: 113 GGFGGGSGGGFGGGYGSGFGGFGGFGGGAGGGDGGILTAN 152
Score = 31.2 bits (69), Expect = 0.24
Identities = 14/31 (45%), Positives = 17/31 (54%)
Query: 5 GGGGGTGAVGGGGTSQASAGAATGATGASGG 35
G GG+G GGG S G +G+ G SGG
Sbjct: 488 GSRGGSGGSYGGGGSGGGYGGGSGSRGGSGG 518
Score = 31.2 bits (69), Expect = 0.24
Identities = 15/34 (44%), Positives = 18/34 (52%), Gaps = 2/34 (5%)
Query: 4 GGGGGGTGAVGGGGTSQASAGAATGATGASGGGG 37
GG GG G GG G+ S G G +G+ GG G
Sbjct: 552 GGSGGNYG--GGSGSGGGSGGGYGGGSGSRGGSG 583
Score = 30.8 bits (68), Expect = 0.31
Identities = 14/32 (43%), Positives = 16/32 (50%)
Query: 4 GGGGGGTGAVGGGGTSQASAGAATGATGASGG 35
G GG G G GG S G +G+ G SGG
Sbjct: 553 GSGGNYGGGSGSGGGSGGGYGGGSGSRGGSGG 584
Score = 30.8 bits (68), Expect = 0.31
Identities = 16/45 (35%), Positives = 21/45 (46%)
Query: 4 GGGGGGTGAVGGGGTSQASAGAATGATGASGGGGPINPASLPPGD 48
GG G G G+ GG G S G + G+ G G G + S G+
Sbjct: 560 GGSGSGGGSGGGYGGGSGSRGGSGGSHGGGSGFGGESGGSYGGGE 604
Score = 30.4 bits (67), Expect = 0.40
Identities = 14/37 (37%), Positives = 17/37 (45%)
Query: 1 MADGGGGGGTGAVGGGGTSQASAGAATGATGASGGGG 37
+ G GGG G G G +S+G G G GGG
Sbjct: 86 LGGGFGGGSRGFGGASGGGYSSSGGFGGGFGGGSGGG 122
Score = 30.4 bits (67), Expect = 0.40
Identities = 14/34 (41%), Positives = 17/34 (50%)
Query: 4 GGGGGGTGAVGGGGTSQASAGAATGATGASGGGG 37
GG GG G+ GG G S G + G+ G G G
Sbjct: 494 GGSYGGGGSGGGYGGGSGSRGGSGGSYGGGSGSG 527
Score = 30.0 bits (66), Expect = 0.53
Identities = 16/36 (44%), Positives = 18/36 (50%), Gaps = 2/36 (5%)
Query: 4 GGGGG--GTGAVGGGGTSQASAGAATGATGASGGGG 37
GG GG G G+ GG G S G+ G G SG G
Sbjct: 479 GGSGGSYGRGSRGGSGGSYGGGGSGGGYGGGSGSRG 514
Score = 30.0 bits (66), Expect = 0.53
Identities = 13/33 (39%), Positives = 16/33 (48%)
Query: 5 GGGGGTGAVGGGGTSQASAGAATGATGASGGGG 37
GG GG+ GG G + G +G S GGG
Sbjct: 491 GGSGGSYGGGGSGGGYGGGSGSRGGSGGSYGGG 523
Score = 30.0 bits (66), Expect = 0.53
Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 2/36 (5%)
Query: 4 GGGGGGTGAVGG--GGTSQASAGAATGATGASGGGG 37
G GGG +G GG GG S + G+ G G SG G
Sbjct: 545 GSGGGHSGGSGGNYGGGSGSGGGSGGGYGGGSGSRG 580
Score = 30.0 bits (66), Expect = 0.53
Identities = 15/34 (44%), Positives = 17/34 (50%)
Query: 4 GGGGGGTGAVGGGGTSQASAGAATGATGASGGGG 37
G GG G G GG S S G A+G+ GG G
Sbjct: 581 GSGGSHGGGSGFGGESGGSYGGGEEASGSGGGYG 614
Score = 29.6 bits (65), Expect = 0.69
Identities = 16/37 (43%), Positives = 21/37 (56%), Gaps = 3/37 (8%)
Query: 4 GGGGGG---TGAVGGGGTSQASAGAATGATGASGGGG 37
GGGGGG + + GGG+S+ G+ G S GGG
Sbjct: 40 GGGGGGRFSSSSGYGGGSSRVCGRGGGGSFGYSYGGG 76
Score = 29.6 bits (65), Expect = 0.69
Identities = 18/38 (47%), Positives = 22/38 (57%), Gaps = 4/38 (10%)
Query: 4 GGGGGGTGA--VGGG--GTSQASAGAATGATGASGGGG 37
GG GGG A +GGG G S+ GA+ G +SGG G
Sbjct: 75 GGSGGGFSASSLGGGFGGGSRGFGGASGGGYSSSGGFG 112
Score = 29.6 bits (65), Expect = 0.69
Identities = 13/32 (40%), Positives = 17/32 (53%)
Query: 5 GGGGGTGAVGGGGTSQASAGAATGATGASGGG 36
GG GG + G GG +G+ G+ G GGG
Sbjct: 544 GGSGGGHSGGSGGNYGGGSGSGGGSGGGYGGG 575
Score = 29.3 bits (64), Expect = 0.90
Identities = 19/43 (44%), Positives = 22/43 (51%), Gaps = 10/43 (23%)
Query: 4 GGGGGGT-----GAVGGGGTSQAS-----AGAATGATGASGGG 36
G GGGG+ G GGG S +S G + G GASGGG
Sbjct: 62 GRGGGGSFGYSYGGGSGGGFSASSLGGGFGGGSRGFGGASGGG 104
Score = 29.3 bits (64), Expect = 0.90
Identities = 15/33 (45%), Positives = 17/33 (51%), Gaps = 2/33 (6%)
Query: 4 GGGGGGTGAVGGGGTSQASAGAATGATGASGGG 36
G GG G+ GGG S +G G G SGGG
Sbjct: 511 GSRGGSGGSYGGGSGSGGGSGGGYG--GGSGGG 541
Score = 29.3 bits (64), Expect = 0.90
Identities = 16/34 (47%), Positives = 17/34 (50%), Gaps = 2/34 (5%)
Query: 4 GGGGGGTGAVGGGGTSQASAGAATGATGASGGGG 37
GG GG G GG G S G+ G ASG GG
Sbjct: 580 GGSGGSHG--GGSGFGGESGGSYGGGEEASGSGG 611
Score = 29.3 bits (64), Expect = 0.90
Identities = 14/33 (42%), Positives = 17/33 (51%)
Query: 4 GGGGGGTGAVGGGGTSQASAGAATGATGASGGG 36
G GGG+G G G S A+G+ G GGG
Sbjct: 584 GSHGGGSGFGGESGGSYGGGEEASGSGGGYGGG 616
Score = 28.9 bits (63), Expect = 1.2
Identities = 17/50 (34%), Positives = 22/50 (44%), Gaps = 16/50 (32%)
Query: 4 GGGGGG----------------TGAVGGGGTSQASAGAATGATGASGGGG 37
GGGGGG +G GGGG +S+G G++ G GG
Sbjct: 16 GGGGGGLGSGGSIRSSYSRFSSSGGGGGGGRFSSSSGYGGGSSRVCGRGG 65
Score = 28.5 bits (62), Expect = 1.5
Identities = 15/35 (42%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Query: 2 ADGGGGGGTGAVGGGGTSQASAGAATGATGASGGG 36
+ GG GGG G GGG G+ G G GGG
Sbjct: 107 SSGGFGGGFGGGSGGGFG-GGYGSGFGGFGGFGGG 140
Score = 28.5 bits (62), Expect = 1.5
Identities = 14/33 (42%), Positives = 15/33 (45%)
Query: 5 GGGGGTGAVGGGGTSQASAGAATGATGASGGGG 37
GGG G G+ GG G S G G GGG
Sbjct: 112 GGGFGGGSGGGFGGGYGSGFGGFGGFGGGAGGG 144
Score = 28.5 bits (62), Expect = 1.5
Identities = 15/36 (41%), Positives = 17/36 (47%), Gaps = 3/36 (8%)
Query: 4 GGGGGGTG---AVGGGGTSQASAGAATGATGASGGG 36
GG GG G GGG G+ G +G SGGG
Sbjct: 514 GGSGGSYGGGSGSGGGSGGGYGGGSGGGHSGGSGGG 549
Score = 27.7 bits (60), Expect = 2.6
Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Query: 2 ADGGGGGGTGAVGGGGTS--QASAGAATGATGASGGGG 37
+ G G G G GG G S + S G + G+ G G GG
Sbjct: 467 SSGAGKIGLGGRGGSGGSYGRGSRGGSGGSYGGGGSGG 504
Score = 27.3 bits (59), Expect = 3.4
Identities = 14/33 (42%), Positives = 16/33 (48%)
Query: 4 GGGGGGTGAVGGGGTSQASAGAATGATGASGGG 36
GGG GG G GG + G G G +GGG
Sbjct: 112 GGGFGGGSGGGFGGGYGSGFGGFGGFGGGAGGG 144
Score = 26.6 bits (57), Expect = 5.8
Identities = 16/40 (40%), Positives = 17/40 (42%), Gaps = 4/40 (10%)
Query: 2 ADGGG----GGGTGAVGGGGTSQASAGAATGATGASGGGG 37
A GGG GG G GGG G +G G G GG
Sbjct: 100 ASGGGYSSSGGFGGGFGGGSGGGFGGGYGSGFGGFGGFGG 139
Score = 26.6 bits (57), Expect = 5.8
Identities = 12/35 (34%), Positives = 17/35 (48%)
Query: 3 DGGGGGGTGAVGGGGTSQASAGAATGATGASGGGG 37
+ G G G G GG+ + + G +G S GGG
Sbjct: 466 ESSGAGKIGLGGRGGSGGSYGRGSRGGSGGSYGGG 500
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.312 0.133 0.393
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,784,847
Number of Sequences: 37866
Number of extensions: 305697
Number of successful extensions: 10031
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 551
Number of HSP's successfully gapped in prelim test: 202
Number of HSP's that attempted gapping in prelim test: 3032
Number of HSP's gapped (non-prelim): 4297
length of query: 129
length of database: 18,247,518
effective HSP length: 90
effective length of query: 39
effective length of database: 14,839,578
effective search space: 578743542
effective search space used: 578743542
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.