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Search of human proteins with 223972690
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|223972690 adenosine deaminase domain containing 2 isoform 2
[Homo sapiens]
(583 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|223972690 adenosine deaminase domain containing 2 isoform 2 [... 1191 0.0
gi|223972688 adenosine deaminase domain containing 2 isoform 1 [... 901 0.0
gi|226530771 adenosine deaminase domain containing 1 (testis-spe... 189 8e-48
gi|21245124 adenosine deaminase domain containing 1 (testis-spec... 189 8e-48
gi|226529650 adenosine deaminase domain containing 1 (testis-spe... 169 6e-42
gi|4501919 RNA-specific adenosine deaminase B1 isoform 1 [Homo s... 142 6e-34
gi|8922077 adenosine deaminase, RNA-specific, B2 [Homo sapiens] 135 1e-31
gi|237681091 RNA-specific adenosine deaminase B1 isoform 7 [Homo... 132 1e-30
gi|70167032 adenosine deaminase, RNA-specific isoform c [Homo sa... 119 8e-27
gi|70166944 adenosine deaminase, RNA-specific isoform b [Homo sa... 119 8e-27
gi|70167113 adenosine deaminase, RNA-specific isoform d [Homo sa... 115 1e-25
gi|70166852 adenosine deaminase, RNA-specific isoform a [Homo sa... 115 1e-25
gi|7669477 RNA-specific adenosine deaminase B1 isoform 2 [Homo s... 84 5e-16
gi|7669479 RNA-specific adenosine deaminase B1 isoform 3 [Homo s... 79 1e-14
gi|6912230 adenosine deaminase, tRNA-specific 1 [Homo sapiens] 43 7e-04
gi|31324577 molecule interacting with Rab13 [Homo sapiens] 42 0.002
gi|153946391 N-methyl-D-aspartate receptor subunit 2D precursor ... 41 0.003
gi|112734870 hypothetical protein LOC57648 [Homo sapiens] 40 0.006
gi|170650694 centaurin, gamma 1 isoform PIKE-L [Homo sapiens] 40 0.008
gi|122937321 UNC homeobox [Homo sapiens] 39 0.010
gi|37537554 hypothetical protein FLJ37538 [Homo sapiens] 39 0.013
gi|239735519 SET binding factor 1 [Homo sapiens] 38 0.023
gi|209862845 nuclear factor of activated T-cells, cytoplasmic, c... 38 0.023
gi|27886563 nuclear factor of activated T-cells, cytoplasmic, ca... 38 0.023
gi|239753839 PREDICTED: hypothetical protein [Homo sapiens] 38 0.023
gi|110832843 TBP-associated factor 4 [Homo sapiens] 38 0.023
gi|45433499 zinc finger, DHHC-type containing 18 [Homo sapiens] 36 0.11
gi|38488720 DiGeorge syndrome critical region gene 8 [Homo sapiens] 35 0.15
gi|112421108 capicua homolog [Homo sapiens] 35 0.15
gi|7662236 TSC22 domain family, member 2 [Homo sapiens] 35 0.19
>gi|223972690 adenosine deaminase domain containing 2 isoform 2
[Homo sapiens]
Length = 583
Score = 1191 bits (3080), Expect = 0.0
Identities = 583/583 (100%), Positives = 583/583 (100%)
Query: 1 MASASQGADDDGSRRKPRLAASLQISPQPRPWRPLPAQAQSAWGPAPAPATYRAEGGWPQ 60
MASASQGADDDGSRRKPRLAASLQISPQPRPWRPLPAQAQSAWGPAPAPATYRAEGGWPQ
Sbjct: 1 MASASQGADDDGSRRKPRLAASLQISPQPRPWRPLPAQAQSAWGPAPAPATYRAEGGWPQ 60
Query: 61 VSVLRDSGPGAGAGVGELGAARAWENLGEQMGKAPRVPVPPAGLSLPLKDPPASQAVSLL 120
VSVLRDSGPGAGAGVGELGAARAWENLGEQMGKAPRVPVPPAGLSLPLKDPPASQAVSLL
Sbjct: 61 VSVLRDSGPGAGAGVGELGAARAWENLGEQMGKAPRVPVPPAGLSLPLKDPPASQAVSLL 120
Query: 121 TEYAASLGIFLLFREDQPPGPCFPFSVSAELDGVVCPAGTANSKTEAKQQAALSALCYIR 180
TEYAASLGIFLLFREDQPPGPCFPFSVSAELDGVVCPAGTANSKTEAKQQAALSALCYIR
Sbjct: 121 TEYAASLGIFLLFREDQPPGPCFPFSVSAELDGVVCPAGTANSKTEAKQQAALSALCYIR 180
Query: 181 SQLENPESPQTSSRPPLAPLSVENILTHEQRCAALVSAGFDLLLDERSPYWACKGTVAGV 240
SQLENPESPQTSSRPPLAPLSVENILTHEQRCAALVSAGFDLLLDERSPYWACKGTVAGV
Sbjct: 181 SQLENPESPQTSSRPPLAPLSVENILTHEQRCAALVSAGFDLLLDERSPYWACKGTVAGV 240
Query: 241 ILEREIPRARGHVKEIYKLVALGTGSSCCAGWLEFSGQQLHDCHGLVIARRALLRFLFRQ 300
ILEREIPRARGHVKEIYKLVALGTGSSCCAGWLEFSGQQLHDCHGLVIARRALLRFLFRQ
Sbjct: 241 ILEREIPRARGHVKEIYKLVALGTGSSCCAGWLEFSGQQLHDCHGLVIARRALLRFLFRQ 300
Query: 301 LLLATQGGPKGKEQSVLAPQPGPGPPFTLKPRVFLHLYISNTPKGAARDIYLPPTSEGGL 360
LLLATQGGPKGKEQSVLAPQPGPGPPFTLKPRVFLHLYISNTPKGAARDIYLPPTSEGGL
Sbjct: 301 LLLATQGGPKGKEQSVLAPQPGPGPPFTLKPRVFLHLYISNTPKGAARDIYLPPTSEGGL 360
Query: 361 PHSPPMRLQAHVLGQLKPVCYVAPSLCDTHVGCLSASDKLARWAVLGLGGALLAHLVSPL 420
PHSPPMRLQAHVLGQLKPVCYVAPSLCDTHVGCLSASDKLARWAVLGLGGALLAHLVSPL
Sbjct: 361 PHSPPMRLQAHVLGQLKPVCYVAPSLCDTHVGCLSASDKLARWAVLGLGGALLAHLVSPL 420
Query: 421 YSTSLILADSCHDPPTLSRAIHTRPCLDSVLGPCLPPPYVRTALHLFAGPPVAPSEPTPD 480
YSTSLILADSCHDPPTLSRAIHTRPCLDSVLGPCLPPPYVRTALHLFAGPPVAPSEPTPD
Sbjct: 421 YSTSLILADSCHDPPTLSRAIHTRPCLDSVLGPCLPPPYVRTALHLFAGPPVAPSEPTPD 480
Query: 481 TCRGLSLNWSLGDPGIEVVDVATGRVKANAALGPPSRLCKASFLRAFHQAARAVGKPYLL 540
TCRGLSLNWSLGDPGIEVVDVATGRVKANAALGPPSRLCKASFLRAFHQAARAVGKPYLL
Sbjct: 481 TCRGLSLNWSLGDPGIEVVDVATGRVKANAALGPPSRLCKASFLRAFHQAARAVGKPYLL 540
Query: 541 ALKTYEAAKAGPYQEARRQLSLLLDQQGLGAWPSKPLVGKFRN 583
ALKTYEAAKAGPYQEARRQLSLLLDQQGLGAWPSKPLVGKFRN
Sbjct: 541 ALKTYEAAKAGPYQEARRQLSLLLDQQGLGAWPSKPLVGKFRN 583
>gi|223972688 adenosine deaminase domain containing 2 isoform 1
[Homo sapiens]
Length = 665
Score = 901 bits (2329), Expect = 0.0
Identities = 444/454 (97%), Positives = 444/454 (97%), Gaps = 10/454 (2%)
Query: 140 GPCFPFSVSAELDGVVCPAGTANSKTEAKQQAALSALCYIRSQLENPESPQTSSRPPLAP 199
GPCFPFSVSAELDGVVCPAGTANSKTEAKQQAALSALCYIRSQLENPESPQTSSRPPLAP
Sbjct: 212 GPCFPFSVSAELDGVVCPAGTANSKTEAKQQAALSALCYIRSQLENPESPQTSSRPPLAP 271
Query: 200 LSVENILTHEQRCAALVSAGFDLLLDERSPYWACKGTVAGVILER----------EIPRA 249
LSVENILTHEQRCAALVSAGFDLLLDERSPYWACKGTVAGVILER EIPRA
Sbjct: 272 LSVENILTHEQRCAALVSAGFDLLLDERSPYWACKGTVAGVILERGWAVSAPSCTEIPRA 331
Query: 250 RGHVKEIYKLVALGTGSSCCAGWLEFSGQQLHDCHGLVIARRALLRFLFRQLLLATQGGP 309
RGHVKEIYKLVALGTGSSCCAGWLEFSGQQLHDCHGLVIARRALLRFLFRQLLLATQGGP
Sbjct: 332 RGHVKEIYKLVALGTGSSCCAGWLEFSGQQLHDCHGLVIARRALLRFLFRQLLLATQGGP 391
Query: 310 KGKEQSVLAPQPGPGPPFTLKPRVFLHLYISNTPKGAARDIYLPPTSEGGLPHSPPMRLQ 369
KGKEQSVLAPQPGPGPPFTLKPRVFLHLYISNTPKGAARDIYLPPTSEGGLPHSPPMRLQ
Sbjct: 392 KGKEQSVLAPQPGPGPPFTLKPRVFLHLYISNTPKGAARDIYLPPTSEGGLPHSPPMRLQ 451
Query: 370 AHVLGQLKPVCYVAPSLCDTHVGCLSASDKLARWAVLGLGGALLAHLVSPLYSTSLILAD 429
AHVLGQLKPVCYVAPSLCDTHVGCLSASDKLARWAVLGLGGALLAHLVSPLYSTSLILAD
Sbjct: 452 AHVLGQLKPVCYVAPSLCDTHVGCLSASDKLARWAVLGLGGALLAHLVSPLYSTSLILAD 511
Query: 430 SCHDPPTLSRAIHTRPCLDSVLGPCLPPPYVRTALHLFAGPPVAPSEPTPDTCRGLSLNW 489
SCHDPPTLSRAIHTRPCLDSVLGPCLPPPYVRTALHLFAGPPVAPSEPTPDTCRGLSLNW
Sbjct: 512 SCHDPPTLSRAIHTRPCLDSVLGPCLPPPYVRTALHLFAGPPVAPSEPTPDTCRGLSLNW 571
Query: 490 SLGDPGIEVVDVATGRVKANAALGPPSRLCKASFLRAFHQAARAVGKPYLLALKTYEAAK 549
SLGDPGIEVVDVATGRVKANAALGPPSRLCKASFLRAFHQAARAVGKPYLLALKTYEAAK
Sbjct: 572 SLGDPGIEVVDVATGRVKANAALGPPSRLCKASFLRAFHQAARAVGKPYLLALKTYEAAK 631
Query: 550 AGPYQEARRQLSLLLDQQGLGAWPSKPLVGKFRN 583
AGPYQEARRQLSLLLDQQGLGAWPSKPLVGKFRN
Sbjct: 632 AGPYQEARRQLSLLLDQQGLGAWPSKPLVGKFRN 665
Score = 290 bits (742), Expect = 3e-78
Identities = 141/145 (97%), Positives = 142/145 (97%)
Query: 1 MASASQGADDDGSRRKPRLAASLQISPQPRPWRPLPAQAQSAWGPAPAPATYRAEGGWPQ 60
MASASQGADDDGSRRKPRLAASLQISPQPRPWRPLPAQAQSAWGPAPAPATYRAEGGWPQ
Sbjct: 1 MASASQGADDDGSRRKPRLAASLQISPQPRPWRPLPAQAQSAWGPAPAPATYRAEGGWPQ 60
Query: 61 VSVLRDSGPGAGAGVGELGAARAWENLGEQMGKAPRVPVPPAGLSLPLKDPPASQAVSLL 120
VSVLRDSGPGAGAGVGELGAARAWENLGEQMGKAPRVPVPPAGLSLPLKDPPASQAVSLL
Sbjct: 61 VSVLRDSGPGAGAGVGELGAARAWENLGEQMGKAPRVPVPPAGLSLPLKDPPASQAVSLL 120
Query: 121 TEYAASLGIFLLFREDQPPGPCFPF 145
TEYAASLGIFLLFREDQPPG F +
Sbjct: 121 TEYAASLGIFLLFREDQPPGKVFKY 145
>gi|226530771 adenosine deaminase domain containing 1
(testis-specific) isoform 3 [Homo sapiens]
Length = 558
Score = 189 bits (479), Expect = 8e-48
Identities = 155/468 (33%), Positives = 236/468 (50%), Gaps = 44/468 (9%)
Query: 140 GPCFPFSVSAELDGVVCPAGTANSKTEAKQQAALSALCYIRSQLENPESP--QTSSRPP- 196
GP F F A +DG+ G +K E++ AA AL + QL+ PE +TS PP
Sbjct: 107 GPYFAFC--AVVDGIQYKTGLGQNKKESRSNAAKLALDELL-QLDEPEPRILETSGPPPF 163
Query: 197 ------LAPLSVENILTHEQR------CAALVSAGFDLLLDERSPYWACKGTVAGVILER 244
L+ L+ + + +E R + +V F+ L+ RS Y ++A I+ER
Sbjct: 164 PAEPVVLSELAYVSKVHYEGRHIQYAKISQIVKERFNQLISNRSEYLKYSSSLAAFIIER 223
Query: 245 EIPRARGHVKEIYKLVALGTGSSCCAGWLEFSGQQLHDCHGLVIARRALLRFLFRQLLLA 304
A H ++VA+GTG + ++ G+ LHD H +V ARR+LLR+ +RQLLL
Sbjct: 224 ----AGQH-----EVVAIGTGEYNYSQDIKPDGRVLHDTHAVVTARRSLLRYFYRQLLLF 274
Query: 305 TQGGPKGKEQSVLAPQPGPGPPFTLKPRVFLHLYISNTPKGAAR---DIYLPPTSEGGLP 361
P E+S+ +P TLK + + LY++ PKG+A+ + L P S
Sbjct: 275 YSKNPAMMEKSIFCTEP-TSNLLTLKQNINICLYMNQLPKGSAQIKSQLRLNPHSISAFE 333
Query: 362 HSPPMRLQAHVLGQLKPVCYVAPSLCDTHVGCLSASDKLARWAVLGLGGALLAHLVSPLY 421
+ + L V G++ Y P + +S+SDKL RW VLG+ GALL+H + P+Y
Sbjct: 334 ANEELCLHVAVEGKIYLTVY-CPKDGVNRISSMSSSDKLTRWEVLGVQGALLSHFIQPVY 392
Query: 422 STSLILAD-SCHDPPTLSRAIHTRPCLDSVLGPCLPPPYVRTALHLFAGPPVAPSEPTPD 480
+S+++ D +C D L AI R +D L LP Y+ H+ P P + +
Sbjct: 393 ISSILIGDGNCSDTRGLEIAIKQR--VDDALTSKLPMFYLVNRPHISLVPSAYPLQMNLE 450
Query: 481 TCRGLSLNWSLGDPGIEVVDVATGRVKAN----AALGPPSRLCKASFLRAFHQAARAVGK 536
+ LSLNW+ GD +E+VD +G++ + + + SRLCKA+ L F+ A+ K
Sbjct: 451 -YKFLSLNWAQGDVSLEIVDGLSGKITESSPFKSGMSMASRLCKAAMLSRFNLLAKE-AK 508
Query: 537 PYLLALKTYEAAK--AGPYQEARRQLSLLLDQQGLGAWPSK-PLVGKF 581
LL TY AAK + YQEA+ +L L Q G G+W K P + +F
Sbjct: 509 KELLEAGTYHAAKCMSASYQEAKCKLKSYLQQHGYGSWIVKSPCIEQF 556
>gi|21245124 adenosine deaminase domain containing 1
(testis-specific) isoform 1 [Homo sapiens]
Length = 576
Score = 189 bits (479), Expect = 8e-48
Identities = 155/468 (33%), Positives = 236/468 (50%), Gaps = 44/468 (9%)
Query: 140 GPCFPFSVSAELDGVVCPAGTANSKTEAKQQAALSALCYIRSQLENPESP--QTSSRPP- 196
GP F F A +DG+ G +K E++ AA AL + QL+ PE +TS PP
Sbjct: 125 GPYFAFC--AVVDGIQYKTGLGQNKKESRSNAAKLALDELL-QLDEPEPRILETSGPPPF 181
Query: 197 ------LAPLSVENILTHEQR------CAALVSAGFDLLLDERSPYWACKGTVAGVILER 244
L+ L+ + + +E R + +V F+ L+ RS Y ++A I+ER
Sbjct: 182 PAEPVVLSELAYVSKVHYEGRHIQYAKISQIVKERFNQLISNRSEYLKYSSSLAAFIIER 241
Query: 245 EIPRARGHVKEIYKLVALGTGSSCCAGWLEFSGQQLHDCHGLVIARRALLRFLFRQLLLA 304
A H ++VA+GTG + ++ G+ LHD H +V ARR+LLR+ +RQLLL
Sbjct: 242 ----AGQH-----EVVAIGTGEYNYSQDIKPDGRVLHDTHAVVTARRSLLRYFYRQLLLF 292
Query: 305 TQGGPKGKEQSVLAPQPGPGPPFTLKPRVFLHLYISNTPKGAAR---DIYLPPTSEGGLP 361
P E+S+ +P TLK + + LY++ PKG+A+ + L P S
Sbjct: 293 YSKNPAMMEKSIFCTEP-TSNLLTLKQNINICLYMNQLPKGSAQIKSQLRLNPHSISAFE 351
Query: 362 HSPPMRLQAHVLGQLKPVCYVAPSLCDTHVGCLSASDKLARWAVLGLGGALLAHLVSPLY 421
+ + L V G++ Y P + +S+SDKL RW VLG+ GALL+H + P+Y
Sbjct: 352 ANEELCLHVAVEGKIYLTVY-CPKDGVNRISSMSSSDKLTRWEVLGVQGALLSHFIQPVY 410
Query: 422 STSLILAD-SCHDPPTLSRAIHTRPCLDSVLGPCLPPPYVRTALHLFAGPPVAPSEPTPD 480
+S+++ D +C D L AI R +D L LP Y+ H+ P P + +
Sbjct: 411 ISSILIGDGNCSDTRGLEIAIKQR--VDDALTSKLPMFYLVNRPHISLVPSAYPLQMNLE 468
Query: 481 TCRGLSLNWSLGDPGIEVVDVATGRVKAN----AALGPPSRLCKASFLRAFHQAARAVGK 536
+ LSLNW+ GD +E+VD +G++ + + + SRLCKA+ L F+ A+ K
Sbjct: 469 -YKFLSLNWAQGDVSLEIVDGLSGKITESSPFKSGMSMASRLCKAAMLSRFNLLAKE-AK 526
Query: 537 PYLLALKTYEAAK--AGPYQEARRQLSLLLDQQGLGAWPSK-PLVGKF 581
LL TY AAK + YQEA+ +L L Q G G+W K P + +F
Sbjct: 527 KELLEAGTYHAAKCMSASYQEAKCKLKSYLQQHGYGSWIVKSPCIEQF 574
>gi|226529650 adenosine deaminase domain containing 1
(testis-specific) isoform 2 [Homo sapiens]
Length = 565
Score = 169 bits (428), Expect = 6e-42
Identities = 149/468 (31%), Positives = 228/468 (48%), Gaps = 55/468 (11%)
Query: 140 GPCFPFSVSAELDGVVCPAGTANSKTEAKQQAALSALCYIRSQLENPESP--QTSSRPP- 196
GP F F A +DG+ G +K E++ AA AL + QL+ PE +TS PP
Sbjct: 125 GPYFAFC--AVVDGIQYKTGLGQNKKESRSNAAKLALDELL-QLDEPEPRILETSGPPPF 181
Query: 197 ------LAPLSVENILTHEQR------CAALVSAGFDLLLDERSPYWACKGTVAGVILER 244
L+ L+ + + +E R + +V F+ L+ RS Y ++A I+ER
Sbjct: 182 PAEPVVLSELAYVSKVHYEGRHIQYAKISQIVKERFNQLISNRSEYLKYSSSLAAFIIER 241
Query: 245 EIPRARGHVKEIYKLVALGTGSSCCAGWLEFSGQQLHDCHGLVIARRALLRFLFRQLLLA 304
A H ++VA+GTG + ++ G+ LHD H +V ARR+LL
Sbjct: 242 ----AGQH-----EVVAIGTGEYNYSQDIKPDGRVLHDTHAVVTARRSLL---------- 282
Query: 305 TQGGPKGKEQSVLAPQPGPGPPFTLKPRVFLHLYISNTPKGAAR---DIYLPPTSEGGLP 361
P E+S+ +P TLK + + LY++ PKG+A+ + L P S
Sbjct: 283 -SKNPAMMEKSIFCTEPTSNL-LTLKQNINICLYMNQLPKGSAQIKSQLRLNPHSISAFE 340
Query: 362 HSPPMRLQAHVLGQLKPVCYVAPSLCDTHVGCLSASDKLARWAVLGLGGALLAHLVSPLY 421
+ + L V G++ Y P + +S+SDKL RW VLG+ GALL+H + P+Y
Sbjct: 341 ANEELCLHVAVEGKIYLTVY-CPKDGVNRISSMSSSDKLTRWEVLGVQGALLSHFIQPVY 399
Query: 422 STSLILAD-SCHDPPTLSRAIHTRPCLDSVLGPCLPPPYVRTALHLFAGPPVAPSEPTPD 480
+S+++ D +C D L AI R +D L LP Y+ H+ P P + +
Sbjct: 400 ISSILIGDGNCSDTRGLEIAIKQR--VDDALTSKLPMFYLVNRPHISLVPSAYPLQMNLE 457
Query: 481 TCRGLSLNWSLGDPGIEVVDVATGRVKAN----AALGPPSRLCKASFLRAFHQAARAVGK 536
+ LSLNW+ GD +E+VD +G++ + + + SRLCKA+ L F+ A+ K
Sbjct: 458 -YKFLSLNWAQGDVSLEIVDGLSGKITESSPFKSGMSMASRLCKAAMLSRFNLLAKE-AK 515
Query: 537 PYLLALKTYEAAK--AGPYQEARRQLSLLLDQQGLGAWPSK-PLVGKF 581
LL TY AAK + YQEA+ +L L Q G G+W K P + +F
Sbjct: 516 KELLEAGTYHAAKCMSASYQEAKCKLKSYLQQHGYGSWIVKSPCIEQF 563
>gi|4501919 RNA-specific adenosine deaminase B1 isoform 1 [Homo
sapiens]
Length = 701
Score = 142 bits (359), Expect = 6e-34
Identities = 148/500 (29%), Positives = 220/500 (44%), Gaps = 51/500 (10%)
Query: 100 PPAGLSLPLKDPPASQAVSLLTEYAASLGIFLLFREDQPPGPCFPFSVSAELDGVVCPAG 159
PP + P P V +L E L L + F SV +DG G
Sbjct: 220 PPLPVLPPFPPPSGKNPVMILNELRPGLKYDFLSESGESHAKSFVMSVV--VDGQFFE-G 276
Query: 160 TANSKTEAKQQAALSALCYIRSQLENPESPQTSSRPPLAPLSVENILTH--EQRCAALVS 217
+ +K AK +AA SAL I N QT SR P+ ++ L + LV
Sbjct: 277 SGRNKKLAKARAAQSALAAIF----NLHLDQTPSRQPIPSEGLQLHLPQVLADAVSRLVL 332
Query: 218 AGFDLLLDERSPYWACKGTVAGVILEREIPRARGHVKEIYKLVALGTGSSCCAG-WLEFS 276
F L D S A + +AGV++ G + K++++ TG+ C G ++
Sbjct: 333 GKFGDLTDNFSSPHARRKVLAGVVM------TTGTDVKDAKVISVSTGTKCINGEYMSDR 386
Query: 277 GQQLHDCHGLVIARRALLRFLFRQLLLATQGGPKGKEQSVLAPQPGPGPPFTLKPRVFLH 336
G L+DCH +I+RR+LLRFL+ QL L K + G F LK V H
Sbjct: 387 GLALNDCHAEIISRRSLLRFLYTQLELYLNNKDDQKRSIFQKSERGG---FRLKENVQFH 443
Query: 337 LYISNTPKGAARDIYLP--PTSEGGLPHSPPMRLQAHVLGQLKPVCYVAPSLCDTHVGC- 393
LYIS +P G AR I+ P P E P + + + +++ P + +
Sbjct: 444 LYISTSPCGDAR-IFSPHEPILEEPADRHPNRKARGQLRTKIESGEGTIPVRSNASIQTW 502
Query: 394 -----------LSASDKLARWAVLGLGGALLAHLVSPLYSTSLILADSCHDPPTLSRAIH 442
+S SDK+ARW V+G+ G+LL+ V P+Y +S+IL H LSRA++
Sbjct: 503 DGVLQGERLLTMSCSDKIARWNVVGIQGSLLSIFVEPIYFSSIILGSLYHG-DHLSRAMY 561
Query: 443 TRPCLDSVLGPCLPPPYVRTALHLFAGPPVAPSEPTPDTCRGLSLNWSLGDPGIEVVDVA 502
R + ++ LPP Y L +G A + P S+NW++GD IEV++
Sbjct: 562 QR--ISNI--EDLPPLYTLNK-PLLSGISNAEAR-QPGKAPNFSVNWTVGDSAIEVINAT 615
Query: 503 TGRVKANAALGPPSRLCK----ASFLRAFHQAARAVGKPYLLALKTYEAAK--AGPYQEA 556
TG+ + LG SRLCK ++R + + + + Y +K A YQ A
Sbjct: 616 TGKDE----LGRASRLCKHALYCRWMRVHGKVPSHLLRSKITKPNVYHESKLAAKEYQAA 671
Query: 557 RRQLSLLLDQQGLGAWPSKP 576
+ +L + GLGAW KP
Sbjct: 672 KARLFTAFIKAGLGAWVEKP 691
>gi|8922077 adenosine deaminase, RNA-specific, B2 [Homo sapiens]
Length = 739
Score = 135 bits (339), Expect = 1e-31
Identities = 140/487 (28%), Positives = 214/487 (43%), Gaps = 52/487 (10%)
Query: 111 PPASQAVSLLTEYAASLGIFLLFREDQPPGPCFPFSVSAELDGVVCPAGTANSKTEAKQQ 170
P V LL A L L + F +VS +DG G+ SK A+ Q
Sbjct: 274 PGERNPVVLLNRLRAGLRYVCLAEPAERRARSFVMAVS--VDGRTFE-GSGRSKKLARGQ 330
Query: 171 AALSALCYIRSQLENPESPQTSSRPPLAPLSVENILTHEQRCAALVSAGFDLLLDERSPY 230
AA +AL + +P + R P+ ++I + LV+ F + + +P
Sbjct: 331 AAQAALQELFDIQMPGHAPGRARRTPMPQEFADSI-------SQLVTQKFREVTTDLTPM 383
Query: 231 WACKGTVAGVILEREIPRARGHVKEIYKLVALGTGSSCCAG-WLEFSGQQLHDCHGLVIA 289
A +AG+++ + + + V VAL +G+ C +G L G ++DCH V+A
Sbjct: 384 HARHKALAGIVMTKGLDARQAQV------VALSSGTKCISGEHLSDQGLVVNDCHAEVVA 437
Query: 290 RRALLRFLFRQLLLATQGGPKGKEQSVLAPQPGPGPPFTLKPRVFLHLYISNTPKGAARD 349
RRA L FL+ QL L + E+S+ G + L+ + HLY+S +P G AR
Sbjct: 438 RRAFLHFLYTQLELHLSKRREDSERSIFVRLKEGG--YRLRENILFHLYVSTSPCGDAR- 494
Query: 350 IYLPPTSEGGLPHSPPM--RLQAHVLGQLKP----VCYVAPSLCDTHVGCL--------S 395
++ P L S + + + H+ +++ V PS T G L S
Sbjct: 495 LHSPYEITTDLHSSKHLVRKFRGHLRTKIESGEGTVPVRGPSAVQTWDGVLLGEQLITMS 554
Query: 396 ASDKLARWAVLGLGGALLAHLVSPLYSTSLILADSCHDPPTLSRAIHTRPCLDSVLGPCL 455
+DK+ARW VLGL GALL+H V P+Y S+++ S H L+R + R + G
Sbjct: 555 CTDKIARWNVLGLQGALLSHFVEPVYLQSIVVG-SLHHTGHLARVMSHR-----MEGVGQ 608
Query: 456 PPPYVRTALHLFAGPPVAPSEPTPDTCRGLSLNWSLGDPGIEVVDVATGRVKANAALGPP 515
P R L +G A + P S+NW +G +E+++ TGR + G P
Sbjct: 609 LPASYRHNRPLLSGVSDAEAR-QPGKSPPFSMNWVVGSADLEIINATTGR----RSCGGP 663
Query: 516 SRLCK----ASFLRAFHQAARAVGKPYLLALKTYEAAKAG--PYQEARRQLSLLLDQQGL 569
SRLCK A + R + + + P Y AK G YQ ++QL + GL
Sbjct: 664 SRLCKHVLSARWARLYGRLSTRTPSPGDTP-SMYCEAKLGAHTYQSVKQQLFKAFQKAGL 722
Query: 570 GAWPSKP 576
G W KP
Sbjct: 723 GTWVRKP 729
>gi|237681091 RNA-specific adenosine deaminase B1 isoform 7 [Homo
sapiens]
Length = 674
Score = 132 bits (331), Expect = 1e-30
Identities = 145/481 (30%), Positives = 211/481 (43%), Gaps = 59/481 (12%)
Query: 100 PPAGLSLPLKDPPASQAVSLLTEYAASLGIFLLFREDQPPGPCFPFSVSAELDGVVCPAG 159
PP + P P V +L E L L + F SV +DG G
Sbjct: 220 PPLPVLPPFPPPSGKNPVMILNELRPGLKYDFLSESGESHAKSFVMSVV--VDGQFFE-G 276
Query: 160 TANSKTEAKQQAALSALCYIRSQLENPESPQTSSRPPLAPLSVENILTH--EQRCAALVS 217
+ +K AK +AA SAL I N QT SR P+ ++ L + LV
Sbjct: 277 SGRNKKLAKARAAQSALAAIF----NLHLDQTPSRQPIPSEGLQLHLPQVLADAVSRLVL 332
Query: 218 AGFDLLLDERSPYWACKGTVAGVILEREIPRARGHVKEIYKLVALGTGSSCCAG-WLEFS 276
F L D S A + +AGV++ G + K++++ TG+ C G ++
Sbjct: 333 GKFGDLTDNFSSPHARRKVLAGVVM------TTGTDVKDAKVISVSTGTKCINGEYMSDR 386
Query: 277 GQQLHDCHGLVIARRALLRFLFRQLLLATQGGPKGKEQSVLAPQPGPGPPFTLKPRVFLH 336
G L+DCH +I+RR+LLRFL+ QL L K + G F LK V H
Sbjct: 387 GLALNDCHAEIISRRSLLRFLYTQLELYLNNKDDQKRSIFQKSERGG---FRLKENVQFH 443
Query: 337 LYISNTPKGAARDIYLP--PTSEGGLPHSPPMRLQAHVLGQLKPVCYVAPSLCDTHVGC- 393
LYIS +P G AR I+ P P E P + + + +++ P + +
Sbjct: 444 LYISTSPCGDAR-IFSPHEPILEEPADRHPNRKARGQLRTKIESGEGTIPVRSNASIQTW 502
Query: 394 -----------LSASDKLARWAVLGLGGALLAHLVSPLYSTSLILADSCHDPPTLSRAIH 442
+S SDK+ARW V+G+ G+LL+ V P+Y +S+IL H LSRA++
Sbjct: 503 DGVLQGERLLTMSCSDKIARWNVVGIQGSLLSIFVEPIYFSSIILGSLYHG-DHLSRAMY 561
Query: 443 TRPCLDSVLGPCLPPPYVRTALHLFAGPPVAPSEPTPDTCRGLSLNWSLGDPGIEVVDVA 502
R + ++ LPP Y L +G A + P S+NW++GD IEV++
Sbjct: 562 QR--ISNI--EDLPPLYTLNK-PLLSGISNAEAR-QPGKAPNFSVNWTVGDSAIEVINAT 615
Query: 503 TGRVKANAALGPPSRLCK-ASFLR--------AFHQAARAVGKPYL-----LALKTYEAA 548
TG+ + LG SRLCK A + R H + KP + LA K Y+AA
Sbjct: 616 TGKDE----LGRASRLCKHALYCRWMRVHGKVPSHLLRSKITKPNVYHESKLAAKEYQAA 671
Query: 549 K 549
K
Sbjct: 672 K 672
>gi|70167032 adenosine deaminase, RNA-specific isoform c [Homo
sapiens]
Length = 1181
Score = 119 bits (298), Expect = 8e-27
Identities = 136/482 (28%), Positives = 206/482 (42%), Gaps = 48/482 (9%)
Query: 120 LTEYAASLGIFLLFR-EDQPPGPCFP-FSVSAELDGVVCPAGTANSKTEAKQQAALSALC 177
L EYA S G F+ DQ P P F A++ G PA A+SK + KQ+AA +AL
Sbjct: 712 LLEYARSHGFAAEFKLVDQSGPPHEPKFVYQAKVGGRWFPAVCAHSKKQGKQEAADAALR 771
Query: 178 YIRSQLENPESPQTSSRPPLAPLSVENILTHEQRCAALVSAGFDLLLDERSPYWACKGTV 237
+ + E E + P + I RC F+ L + P + +
Sbjct: 772 VLIGENEKAERMGFTELPLTGSTFHDQIAMLSHRC-------FNTLTNSFQPSLLGRKIL 824
Query: 238 AGVILEREIPRARGHVKEIYKLVALGTGSSCCAG-WLEFSGQQLHDCHGLVIARRALLRF 296
A +I++++ +++ +V+LGTG+ C G L G+ ++DCH +I+RR +RF
Sbjct: 825 AAIIMKKDS-------EDMGVVVSLGTGNRCVKGDSLSLKGETVNDCHAEIISRRGFIRF 877
Query: 297 LFRQLLLATQGGPKGKEQSVLAPQPGPGPPFTLKPRVFLHLYISNTPKG-------AARD 349
L+ +L+ + + + S+ P G G +K V HLYIS P G + D
Sbjct: 878 LYSELM---KYNSQTAKDSIFEPAKG-GEKLQIKKTVSFHLYISTAPCGDGALFDKSCSD 933
Query: 350 IYLPPTSEGGLP--HSPPM-RLQAHVLGQLKPVCYVAPSLCDTHVG--------CLSASD 398
+ T P +P +L+ V + + + T G +S SD
Sbjct: 934 RAMESTESRHYPVFENPKQGKLRTKVENGEGTIPVESSDIVPTWDGIRLGERLRTMSCSD 993
Query: 399 KLARWAVLGLGGALLAHLVSPLYSTSLILADSCHDPPTLSRAIHTRPCLD-SVLGPCLPP 457
K+ RW VLGL GALL H + P+Y S+ L L+RAI R D S L
Sbjct: 994 KILRWNVLGLQGALLTHFLQPIYLKSVTLG-YLFSQGHLTRAICCRVTRDGSAFEDGLRH 1052
Query: 458 PYVRTALHLFAG-PPVAPSEPTPDTCRGLSLNWSLGDP-GIEVVDVATGRVKANAALGPP 515
P++ H G + S+ + S+NW L D +E++D G V +
Sbjct: 1053 PFI--VNHPKVGRVSIYDSKRQSGKTKETSVNWCLADGYDLEILDGTRGTV--DGPRNEL 1108
Query: 516 SRLCKASFLRAFHQAARAVGKPYLLALKTYEAAKAG-PYQEARRQLSLLLDQQGLGAWPS 574
SR+ K + F + + LL L EA KA Y+ A+ L G G W S
Sbjct: 1109 SRVSKKNIFLLFKKLCSFRYRRDLLRLSYGEAKKAARDYETAKNYFKKGLKDMGYGNWIS 1168
Query: 575 KP 576
KP
Sbjct: 1169 KP 1170
>gi|70166944 adenosine deaminase, RNA-specific isoform b [Homo
sapiens]
Length = 1200
Score = 119 bits (298), Expect = 8e-27
Identities = 136/482 (28%), Positives = 206/482 (42%), Gaps = 48/482 (9%)
Query: 120 LTEYAASLGIFLLFR-EDQPPGPCFP-FSVSAELDGVVCPAGTANSKTEAKQQAALSALC 177
L EYA S G F+ DQ P P F A++ G PA A+SK + KQ+AA +AL
Sbjct: 731 LLEYARSHGFAAEFKLVDQSGPPHEPKFVYQAKVGGRWFPAVCAHSKKQGKQEAADAALR 790
Query: 178 YIRSQLENPESPQTSSRPPLAPLSVENILTHEQRCAALVSAGFDLLLDERSPYWACKGTV 237
+ + E E + P + I RC F+ L + P + +
Sbjct: 791 VLIGENEKAERMGFTELPLTGSTFHDQIAMLSHRC-------FNTLTNSFQPSLLGRKIL 843
Query: 238 AGVILEREIPRARGHVKEIYKLVALGTGSSCCAG-WLEFSGQQLHDCHGLVIARRALLRF 296
A +I++++ +++ +V+LGTG+ C G L G+ ++DCH +I+RR +RF
Sbjct: 844 AAIIMKKDS-------EDMGVVVSLGTGNRCVKGDSLSLKGETVNDCHAEIISRRGFIRF 896
Query: 297 LFRQLLLATQGGPKGKEQSVLAPQPGPGPPFTLKPRVFLHLYISNTPKG-------AARD 349
L+ +L+ + + + S+ P G G +K V HLYIS P G + D
Sbjct: 897 LYSELM---KYNSQTAKDSIFEPAKG-GEKLQIKKTVSFHLYISTAPCGDGALFDKSCSD 952
Query: 350 IYLPPTSEGGLP--HSPPM-RLQAHVLGQLKPVCYVAPSLCDTHVG--------CLSASD 398
+ T P +P +L+ V + + + T G +S SD
Sbjct: 953 RAMESTESRHYPVFENPKQGKLRTKVENGEGTIPVESSDIVPTWDGIRLGERLRTMSCSD 1012
Query: 399 KLARWAVLGLGGALLAHLVSPLYSTSLILADSCHDPPTLSRAIHTRPCLD-SVLGPCLPP 457
K+ RW VLGL GALL H + P+Y S+ L L+RAI R D S L
Sbjct: 1013 KILRWNVLGLQGALLTHFLQPIYLKSVTLG-YLFSQGHLTRAICCRVTRDGSAFEDGLRH 1071
Query: 458 PYVRTALHLFAG-PPVAPSEPTPDTCRGLSLNWSLGDP-GIEVVDVATGRVKANAALGPP 515
P++ H G + S+ + S+NW L D +E++D G V +
Sbjct: 1072 PFI--VNHPKVGRVSIYDSKRQSGKTKETSVNWCLADGYDLEILDGTRGTV--DGPRNEL 1127
Query: 516 SRLCKASFLRAFHQAARAVGKPYLLALKTYEAAKAG-PYQEARRQLSLLLDQQGLGAWPS 574
SR+ K + F + + LL L EA KA Y+ A+ L G G W S
Sbjct: 1128 SRVSKKNIFLLFKKLCSFRYRRDLLRLSYGEAKKAARDYETAKNYFKKGLKDMGYGNWIS 1187
Query: 575 KP 576
KP
Sbjct: 1188 KP 1189
>gi|70167113 adenosine deaminase, RNA-specific isoform d [Homo
sapiens]
Length = 931
Score = 115 bits (288), Expect = 1e-25
Identities = 137/501 (27%), Positives = 210/501 (41%), Gaps = 60/501 (11%)
Query: 120 LTEYAASLGIFLLFR-EDQPPGPCFP-FSVSAELDGVVCPAGTANSKTEAKQQAALSALC 177
L EYA S G F+ DQ P P F A++ G PA A+SK + KQ+AA +AL
Sbjct: 436 LLEYARSHGFAAEFKLVDQSGPPHEPKFVYQAKVGGRWFPAVCAHSKKQGKQEAADAALR 495
Query: 178 YIRSQLENPESPQTSSRPPLAPLSVENIL-------------------THEQRCAALVSA 218
+ + E E + P+ S+ + T + A L
Sbjct: 496 VLIGENEKAERMGFTEVTPVTGASLRRTMLLLSRSPEAQPKTLPLTGSTFHDQIAMLSHR 555
Query: 219 GFDLLLDERSPYWACKGTVAGVILEREIPRARGHVKEIYKLVALGTGSSCCAG-WLEFSG 277
F+ L + P + +A +I++++ +++ +V+LGTG+ C G L G
Sbjct: 556 CFNTLTNSFQPSLLGRKILAAIIMKKDS-------EDMGVVVSLGTGNRCVKGDSLSLKG 608
Query: 278 QQLHDCHGLVIARRALLRFLFRQLLLATQGGPKGKEQSVLAPQPGPGPPFTLKPRVFLHL 337
+ ++DCH +I+RR +RFL+ +L+ + + + S+ P G G +K V HL
Sbjct: 609 ETVNDCHAEIISRRGFIRFLYSELM---KYNSQTAKDSIFEPAKG-GEKLQIKKTVSFHL 664
Query: 338 YISNTPKG-------AARDIYLPPTSEGGLP--HSPPM-RLQAHVLGQLKPVCYVAPSLC 387
YIS P G + D + T P +P +L+ V + + +
Sbjct: 665 YISTAPCGDGALFDKSCSDRAMESTESRHYPVFENPKQGKLRTKVENGEGTIPVESSDIV 724
Query: 388 DTHVG--------CLSASDKLARWAVLGLGGALLAHLVSPLYSTSLILADSCHDPPTLSR 439
T G +S SDK+ RW VLGL GALL H + P+Y S+ L L+R
Sbjct: 725 PTWDGIRLGERLRTMSCSDKILRWNVLGLQGALLTHFLQPIYLKSVTLG-YLFSQGHLTR 783
Query: 440 AIHTRPCLD-SVLGPCLPPPYVRTALHLFAG-PPVAPSEPTPDTCRGLSLNWSLGDP-GI 496
AI R D S L P++ H G + S+ + S+NW L D +
Sbjct: 784 AICCRVTRDGSAFEDGLRHPFI--VNHPKVGRVSIYDSKRQSGKTKETSVNWCLADGYDL 841
Query: 497 EVVDVATGRVKANAALGPPSRLCKASFLRAFHQAARAVGKPYLLALKTYEAAKAG-PYQE 555
E++D G V + SR+ K + F + + LL L EA KA Y+
Sbjct: 842 EILDGTRGTV--DGPRNELSRVSKKNIFLLFKKLCSFRYRRDLLRLSYGEAKKAARDYET 899
Query: 556 ARRQLSLLLDQQGLGAWPSKP 576
A+ L G G W SKP
Sbjct: 900 AKNYFKKGLKDMGYGNWISKP 920
>gi|70166852 adenosine deaminase, RNA-specific isoform a [Homo
sapiens]
Length = 1226
Score = 115 bits (288), Expect = 1e-25
Identities = 137/501 (27%), Positives = 210/501 (41%), Gaps = 60/501 (11%)
Query: 120 LTEYAASLGIFLLFR-EDQPPGPCFP-FSVSAELDGVVCPAGTANSKTEAKQQAALSALC 177
L EYA S G F+ DQ P P F A++ G PA A+SK + KQ+AA +AL
Sbjct: 731 LLEYARSHGFAAEFKLVDQSGPPHEPKFVYQAKVGGRWFPAVCAHSKKQGKQEAADAALR 790
Query: 178 YIRSQLENPESPQTSSRPPLAPLSVENIL-------------------THEQRCAALVSA 218
+ + E E + P+ S+ + T + A L
Sbjct: 791 VLIGENEKAERMGFTEVTPVTGASLRRTMLLLSRSPEAQPKTLPLTGSTFHDQIAMLSHR 850
Query: 219 GFDLLLDERSPYWACKGTVAGVILEREIPRARGHVKEIYKLVALGTGSSCCAG-WLEFSG 277
F+ L + P + +A +I++++ +++ +V+LGTG+ C G L G
Sbjct: 851 CFNTLTNSFQPSLLGRKILAAIIMKKDS-------EDMGVVVSLGTGNRCVKGDSLSLKG 903
Query: 278 QQLHDCHGLVIARRALLRFLFRQLLLATQGGPKGKEQSVLAPQPGPGPPFTLKPRVFLHL 337
+ ++DCH +I+RR +RFL+ +L+ + + + S+ P G G +K V HL
Sbjct: 904 ETVNDCHAEIISRRGFIRFLYSELM---KYNSQTAKDSIFEPAKG-GEKLQIKKTVSFHL 959
Query: 338 YISNTPKG-------AARDIYLPPTSEGGLP--HSPPM-RLQAHVLGQLKPVCYVAPSLC 387
YIS P G + D + T P +P +L+ V + + +
Sbjct: 960 YISTAPCGDGALFDKSCSDRAMESTESRHYPVFENPKQGKLRTKVENGEGTIPVESSDIV 1019
Query: 388 DTHVG--------CLSASDKLARWAVLGLGGALLAHLVSPLYSTSLILADSCHDPPTLSR 439
T G +S SDK+ RW VLGL GALL H + P+Y S+ L L+R
Sbjct: 1020 PTWDGIRLGERLRTMSCSDKILRWNVLGLQGALLTHFLQPIYLKSVTLG-YLFSQGHLTR 1078
Query: 440 AIHTRPCLD-SVLGPCLPPPYVRTALHLFAG-PPVAPSEPTPDTCRGLSLNWSLGDP-GI 496
AI R D S L P++ H G + S+ + S+NW L D +
Sbjct: 1079 AICCRVTRDGSAFEDGLRHPFI--VNHPKVGRVSIYDSKRQSGKTKETSVNWCLADGYDL 1136
Query: 497 EVVDVATGRVKANAALGPPSRLCKASFLRAFHQAARAVGKPYLLALKTYEAAKAG-PYQE 555
E++D G V + SR+ K + F + + LL L EA KA Y+
Sbjct: 1137 EILDGTRGTV--DGPRNELSRVSKKNIFLLFKKLCSFRYRRDLLRLSYGEAKKAARDYET 1194
Query: 556 ARRQLSLLLDQQGLGAWPSKP 576
A+ L G G W SKP
Sbjct: 1195 AKNYFKKGLKDMGYGNWISKP 1215
>gi|7669477 RNA-specific adenosine deaminase B1 isoform 2 [Homo
sapiens]
Length = 741
Score = 83.6 bits (205), Expect = 5e-16
Identities = 64/189 (33%), Positives = 97/189 (51%), Gaps = 17/189 (8%)
Query: 394 LSASDKLARWAVLGLGGALLAHLVSPLYSTSLILADSCHDPPTLSRAIHTRPCLDSVLGP 453
+S SDK+ARW V+G+ G+LL+ V P+Y +S+IL H LSRA++ R + ++
Sbjct: 554 MSCSDKIARWNVVGIQGSLLSIFVEPIYFSSIILGSLYHG-DHLSRAMYQR--ISNI--E 608
Query: 454 CLPPPYVRTALHLFAGPPVAPSEPTPDTCRGLSLNWSLGDPGIEVVDVATGRVKANAALG 513
LPP Y L +G A + P S+NW++GD IEV++ TG+ + LG
Sbjct: 609 DLPPLYTLNK-PLLSGISNAEAR-QPGKAPNFSVNWTVGDSAIEVINATTGKDE----LG 662
Query: 514 PPSRLCK----ASFLRAFHQAARAVGKPYLLALKTYEAAK--AGPYQEARRQLSLLLDQQ 567
SRLCK ++R + + + + Y +K A YQ A+ +L +
Sbjct: 663 RASRLCKHALYCRWMRVHGKVPSHLLRSKITKPNVYHESKLAAKEYQAAKARLFTAFIKA 722
Query: 568 GLGAWPSKP 576
GLGAW KP
Sbjct: 723 GLGAWVEKP 731
Score = 79.0 bits (193), Expect = 1e-14
Identities = 83/264 (31%), Positives = 114/264 (43%), Gaps = 22/264 (8%)
Query: 100 PPAGLSLPLKDPPASQAVSLLTEYAASLGIFLLFREDQPPGPCFPFSVSAELDGVVCPAG 159
PP + P P V +L E L L + F SV +DG G
Sbjct: 220 PPLPVLPPFPPPSGKNPVMILNELRPGLKYDFLSESGESHAKSFVMSVV--VDGQFFE-G 276
Query: 160 TANSKTEAKQQAALSALCYIRSQLENPESPQTSSRPPLAPLSVENILTH--EQRCAALVS 217
+ +K AK +AA SAL I N QT SR P+ ++ L + LV
Sbjct: 277 SGRNKKLAKARAAQSALAAIF----NLHLDQTPSRQPIPSEGLQLHLPQVLADAVSRLVL 332
Query: 218 AGFDLLLDERSPYWACKGTVAGVILEREIPRARGHVKEIYKLVALGTGSSCCAG-WLEFS 276
F L D S A + +AGV++ G + K++++ TG+ C G ++
Sbjct: 333 GKFGDLTDNFSSPHARRKVLAGVVM------TTGTDVKDAKVISVSTGTKCINGEYMSDR 386
Query: 277 GQQLHDCHGLVIARRALLRFLFRQLLLATQGGPKGKEQSVLAPQPGPGPPFTLKPRVFLH 336
G L+DCH +I+RR+LLRFL+ QL L K + G F LK V H
Sbjct: 387 GLALNDCHAEIISRRSLLRFLYTQLELYLNNKDDQKRSIFQKSERG---GFRLKENVQFH 443
Query: 337 LYISNTPKGAARDIYLP--PTSEG 358
LYIS +P G AR I+ P P EG
Sbjct: 444 LYISTSPCGDAR-IFSPHEPILEG 466
>gi|7669479 RNA-specific adenosine deaminase B1 isoform 3 [Homo
sapiens]
Length = 714
Score = 79.0 bits (193), Expect = 1e-14
Identities = 83/264 (31%), Positives = 114/264 (43%), Gaps = 22/264 (8%)
Query: 100 PPAGLSLPLKDPPASQAVSLLTEYAASLGIFLLFREDQPPGPCFPFSVSAELDGVVCPAG 159
PP + P P V +L E L L + F SV +DG G
Sbjct: 220 PPLPVLPPFPPPSGKNPVMILNELRPGLKYDFLSESGESHAKSFVMSVV--VDGQFFE-G 276
Query: 160 TANSKTEAKQQAALSALCYIRSQLENPESPQTSSRPPLAPLSVENILTH--EQRCAALVS 217
+ +K AK +AA SAL I N QT SR P+ ++ L + LV
Sbjct: 277 SGRNKKLAKARAAQSALAAIF----NLHLDQTPSRQPIPSEGLQLHLPQVLADAVSRLVL 332
Query: 218 AGFDLLLDERSPYWACKGTVAGVILEREIPRARGHVKEIYKLVALGTGSSCCAG-WLEFS 276
F L D S A + +AGV++ G + K++++ TG+ C G ++
Sbjct: 333 GKFGDLTDNFSSPHARRKVLAGVVM------TTGTDVKDAKVISVSTGTKCINGEYMSDR 386
Query: 277 GQQLHDCHGLVIARRALLRFLFRQLLLATQGGPKGKEQSVLAPQPGPGPPFTLKPRVFLH 336
G L+DCH +I+RR+LLRFL+ QL L K + G F LK V H
Sbjct: 387 GLALNDCHAEIISRRSLLRFLYTQLELYLNNKDDQKRSIFQKSERG---GFRLKENVQFH 443
Query: 337 LYISNTPKGAARDIYLP--PTSEG 358
LYIS +P G AR I+ P P EG
Sbjct: 444 LYISTSPCGDAR-IFSPHEPILEG 466
Score = 72.8 bits (177), Expect = 8e-13
Identities = 61/170 (35%), Positives = 88/170 (51%), Gaps = 25/170 (14%)
Query: 394 LSASDKLARWAVLGLGGALLAHLVSPLYSTSLILADSCHDPPTLSRAIHTRPCLDSVLGP 453
+S SDK+ARW V+G+ G+LL+ V P+Y +S+IL H LSRA++ R + ++
Sbjct: 554 MSCSDKIARWNVVGIQGSLLSIFVEPIYFSSIILGSLYHG-DHLSRAMYQR--ISNI--E 608
Query: 454 CLPPPYVRTALHLFAGPPVAPSEPTPDTCRGLSLNWSLGDPGIEVVDVATGRVKANAALG 513
LPP Y L +G A + P S+NW++GD IEV++ TG+ + LG
Sbjct: 609 DLPPLYTLNK-PLLSGISNAEAR-QPGKAPNFSVNWTVGDSAIEVINATTGKDE----LG 662
Query: 514 PPSRLCK-ASFLR--------AFHQAARAVGKPYL-----LALKTYEAAK 549
SRLCK A + R H + KP + LA K Y+AAK
Sbjct: 663 RASRLCKHALYCRWMRVHGKVPSHLLRSKITKPNVYHESKLAAKEYQAAK 712
>gi|6912230 adenosine deaminase, tRNA-specific 1 [Homo sapiens]
Length = 502
Score = 43.1 bits (100), Expect = 7e-04
Identities = 31/91 (34%), Positives = 47/91 (51%), Gaps = 6/91 (6%)
Query: 258 KLVALGTGSSCCA-GWLEFSGQQLHDCHGLVIARRALLRFLFRQLLLATQGGPKGKEQSV 316
++V++GTG+ C + +G L+D H VIARR+ R+L QL LA KE S+
Sbjct: 60 EIVSMGTGTKCIGQSKMRKNGDILNDSHAEVIARRSFQRYLLHQLQLAA----TLKEDSI 115
Query: 317 LAPQPGPGPPFTLKPRVFLHLYISNTPKGAA 347
P G + L+ + + S+TP G A
Sbjct: 116 FVPGTQKG-VWKLRRDLIFVFFSSHTPCGDA 145
Score = 43.1 bits (100), Expect = 7e-04
Identities = 20/49 (40%), Positives = 32/49 (65%), Gaps = 1/49 (2%)
Query: 394 LSASDKLARWAVLGLGGALLAHLV-SPLYSTSLILADSCHDPPTLSRAI 441
+S SDK+ARW VLG GALL HL+ P+Y +++++ + + RA+
Sbjct: 297 MSCSDKMARWNVLGCQGALLMHLLEEPIYLSAVVIGKCPYSQEAMQRAL 345
>gi|31324577 molecule interacting with Rab13 [Homo sapiens]
Length = 863
Score = 41.6 bits (96), Expect = 0.002
Identities = 36/121 (29%), Positives = 47/121 (38%), Gaps = 19/121 (15%)
Query: 2 ASASQGADDDGSRR----------KPRLAASLQISPQPRPWRPLPAQAQSAWGPAPAPAT 51
+SA GA+ DG + KPR+ LQ P RP PA +++ PAP T
Sbjct: 259 SSAPAGAEADGPKASPEARPQIPTKPRVPGKLQELASPPAGRPTPAPRKASESTTPAPPT 318
Query: 52 YRAEGGWPQVSVLRDSGPGAGAGVGELGAARAWENLGEQMGKAPRVPVPPAGLSLPLKDP 111
R Q +++ AG L R E + K P P G P KDP
Sbjct: 319 PRPRSSLQQENLVEQ------AGSSSLVNGRLHE---LPVPKPRGTPKPSEGTPAPRKDP 369
Query: 112 P 112
P
Sbjct: 370 P 370
>gi|153946391 N-methyl-D-aspartate receptor subunit 2D precursor [Homo
sapiens]
Length = 1336
Score = 41.2 bits (95), Expect = 0.003
Identities = 54/189 (28%), Positives = 75/189 (39%), Gaps = 41/189 (21%)
Query: 29 PRPWRPLPAQAQSAWGPAPAPATY--RAEGGWPQVSVLRDSGPGAGAGVGELGAARAW-- 84
P P +PLP+ A A PAP PA + R + + +GP GAG+ + G R +
Sbjct: 909 PPPPQPLPSPAYPAPRPAPGPAPFVPRERASVDRWRRTKGAGPPGGAGLAD-GFHRYYGP 967
Query: 85 ---ENLGEQMGKAPRVPVPPAG--LSLPLKDPPASQAVSLLTEYAASLGIFLLFRED--- 136
+ LG +G+A P AG LS P PP S F + R+
Sbjct: 968 IEPQGLGLGLGEARAAPRGAAGRPLSPPAAQPPQKPPPS----------YFAIVRDKEPA 1017
Query: 137 QPPGPCFPFSVSAELDGVVCPAGTANSKTEAKQQAALSALCYIRSQLENPESP------Q 190
+PP FP S PA A + T A LC + + E+P +P
Sbjct: 1018 EPPAGAFPGFPSP-------PAPPAAAAT-----AVGPPLCRLAFEDESPPAPARWPRSD 1065
Query: 191 TSSRPPLAP 199
S+P L P
Sbjct: 1066 PESQPLLGP 1074
>gi|112734870 hypothetical protein LOC57648 [Homo sapiens]
Length = 1094
Score = 40.0 bits (92), Expect = 0.006
Identities = 68/223 (30%), Positives = 82/223 (36%), Gaps = 72/223 (32%)
Query: 20 AASLQI----SPQPRPWRPLPAQAQSAWG-----PAPAPATYRAEGGWPQVSV------- 63
A +LQI SP P P P PA A SA G P P GG P+ V
Sbjct: 822 ATALQIQPPGSPDPPPAPPAPAPASSAPGHVAKLPQKEPVGCSKGGGPPREDVGAPLVTP 881
Query: 64 -------LRDSGPGAGAGVGELGAARAWENLGEQM-GKAPRVPVPPAGLSLPLKDPPASQ 115
LR G GA LG + + L + G+A VP P +GL ++ +
Sbjct: 882 SLLQMVRLRSVGAPGGAPTPALGPSAPQKPLRRALSGRASPVPAPSSGLHAAVR----LK 937
Query: 116 AVSLLTEYAASLGIFLLFREDQPPGPCFPFSVSAELDGVVCPAGTAN---SKTEAKQQAA 172
A SL AAS G+ QP GP AE PA TA+ SK K
Sbjct: 938 ACSL----AASEGL----SSAQPNGP-----PEAEPRPPQSPASTASFIFSKGSRK---- 980
Query: 173 LSALCYIRSQLENPESPQTSS----------------RPPLAP 199
QLE P SP+T + RPP AP
Sbjct: 981 --------LQLERPVSPETQADLQRNLVAELRSISEQRPPQAP 1015
>gi|170650694 centaurin, gamma 1 isoform PIKE-L [Homo sapiens]
Length = 1192
Score = 39.7 bits (91), Expect = 0.008
Identities = 30/107 (28%), Positives = 42/107 (39%), Gaps = 14/107 (13%)
Query: 48 APATYRAEGGWPQVSVLRDSGPGAGAGVGELGAARAWENLGEQMGKAPRVPVPPAGLSLP 107
A AT A GG + + G GAG G G + + + + P PPAG P
Sbjct: 236 AAATAAAAGGGGSTA---STSGGVGAGAGARGKLSPRKGKSKTLDNSDLHPGPPAGSPPP 292
Query: 108 LKDPPASQAVSLLTEYAASLGIFLLFREDQPPGPCFPFSVSAELDGV 154
L PP + +T +A QPPGP P ++ G+
Sbjct: 293 LTLPPTPSPATAVTAASA-----------QPPGPAPPITLEPPAPGL 328
>gi|122937321 UNC homeobox [Homo sapiens]
Length = 531
Score = 39.3 bits (90), Expect = 0.010
Identities = 39/126 (30%), Positives = 47/126 (37%), Gaps = 12/126 (9%)
Query: 27 PQPRPWRPLPAQAQSAWGPAPAPATYRAEGGWPQV------SVLRDSGPGAGAGVGELGA 80
PQPRP RP A S A A R G P+ S+L DS P A A
Sbjct: 295 PQPRPGRPADKDAASCGPGAAVAAVERGAAGLPKASPFSVESLLSDSPPRRKAASNAAAA 354
Query: 81 ARAWENLGEQMGKAPRVPVPPAGLSLPLKDPPASQAVSLLTEYAASLGIFLL--FREDQP 138
A A + + APR + L P +Q + L AA G L +D P
Sbjct: 355 AAAGLDFAPGLPCAPRTLIGKGHFLL----YPITQPLGFLVPQAALKGGAGLEPAPKDAP 410
Query: 139 PGPCFP 144
P P P
Sbjct: 411 PAPAVP 416
>gi|37537554 hypothetical protein FLJ37538 [Homo sapiens]
Length = 841
Score = 38.9 bits (89), Expect = 0.013
Identities = 59/251 (23%), Positives = 83/251 (33%), Gaps = 47/251 (18%)
Query: 2 ASASQGADDDGSRRKPRLAASLQISPQPRPWRPLPAQAQSAWGPAPAPATYRAEGGWPQV 61
A ++ DG R P L S + + P +PA+ + P P P P
Sbjct: 343 AKSASRTPGDGVSRLPVLCHSKEPAGST-PAPQVPARERETPPPPPPPPAANLLLLGPSG 401
Query: 62 SVLRDSGP----GAGAGVGELGAARAWENLGEQMGKAPRVPVPPAGLSLPLKDPPASQAV 117
S P G+G GE + + + AP P PA L L PP +AV
Sbjct: 402 RARSHSTPLPPQGSGQPRGERELPNSHSMICPKAAGAPAAPPAPAAL---LPGPPKDKAV 458
Query: 118 SLLTEYAASLGIFLLFREDQPPGPCFPFSVSAELDGVVCPAGTANSKTEAKQQAALSALC 177
S Y+A + + P GP P G KTE + LC
Sbjct: 459 SYTMVYSA---VKVTTHSVLPAGP---------------PLGAGEPKTEKEISVLHGMLC 500
Query: 178 YIRSQLENPESPQTSSRPPL--------APLSVENILTHEQRCAALVSAGFDLLLDERSP 229
TSSRPP+ + + H + C A + D + +P
Sbjct: 501 -------------TSSRPPVPGKTSPHGGAMGAAAGVLHHRGCLASPHSLPDPTVGPLTP 547
Query: 230 YWACKGTVAGV 240
W T AG+
Sbjct: 548 LWTYPATAAGL 558
>gi|239735519 SET binding factor 1 [Homo sapiens]
Length = 1893
Score = 38.1 bits (87), Expect = 0.023
Identities = 45/175 (25%), Positives = 70/175 (40%), Gaps = 34/175 (19%)
Query: 36 PAQAQSAWGPAPAPATYRAEGGWPQ-----VSVLRDSGPGAGAGV------------GEL 78
P + A GP P R++GG PQ V DS P A EL
Sbjct: 1631 PYDWELAQGPPEPPEEERSDGGAPQSRRRVVWPCYDSCPRAQPDAISRLLEELQRLETEL 1690
Query: 79 G-AARAWENLGEQMGKAPRVPVPPAGLSLPLKDPPASQAVSLLTEYAASLGIFLLFREDQ 137
G A W++ +++ A R+ P G + P+S VS + SLG++L ++
Sbjct: 1691 GQPAERWKDTWDRVKAAQRLEGRPDG-----RGTPSSLLVSTAPHHRRSLGVYL---QEG 1742
Query: 138 PPGPCFPFSVSAELDGVVCPAGTANSKTEAKQQAALSALCYIRSQLENPESPQTS 192
P G S+ ++ ++ S T +QAA + + SQ + ES S
Sbjct: 1743 PVGSTLSLSLDSD--------QSSGSTTSGSRQAARRSTSTLYSQFQTAESENRS 1789
>gi|209862845 nuclear factor of activated T-cells, cytoplasmic,
calcineurin-dependent 4 isoform 1 [Homo sapiens]
Length = 964
Score = 38.1 bits (87), Expect = 0.023
Identities = 54/182 (29%), Positives = 72/182 (39%), Gaps = 34/182 (18%)
Query: 29 PRPWRPLPAQAQSAWGPAPAPATYRAEGGWPQVSVLRDSGPGAGAGVGELGAARAWENLG 88
PRP P P PAP+P T+ ++ P SV R GPG GA G G R E
Sbjct: 125 PRPPPPRPGMHSPPPRPAPSPGTWESQ---PARSV-RLGGPGGGA--GGAGGGRVLECPS 178
Query: 89 EQMGKAPRVPVPPAGLSLPLKDPPASQAVSLLTEYAASLGIFLLFREDQPPGPCFPFSVS 148
++ P PPA L+D P + +Y G F +RE G FS S
Sbjct: 179 IRITSISPTPEPPAA----LEDNPDAWGDGSPRDYPPPEG-FGGYREAGGQGGGAFFSPS 233
Query: 149 AELDGVVCPAGTANSK----TEAKQQAALSALC-YIRSQLENP----------ESPQTSS 193
P ++ S ++A +AAL A C + S+L SP+ S
Sbjct: 234 --------PGSSSLSSWSFFSDASDEAALYAACDEVESELNEAASRFGLGSPLPSPRASP 285
Query: 194 RP 195
RP
Sbjct: 286 RP 287
>gi|27886563 nuclear factor of activated T-cells, cytoplasmic,
calcineurin-dependent 4 isoform 2 [Homo sapiens]
Length = 902
Score = 38.1 bits (87), Expect = 0.023
Identities = 54/182 (29%), Positives = 72/182 (39%), Gaps = 34/182 (18%)
Query: 29 PRPWRPLPAQAQSAWGPAPAPATYRAEGGWPQVSVLRDSGPGAGAGVGELGAARAWENLG 88
PRP P P PAP+P T+ ++ P SV R GPG GA G G R E
Sbjct: 62 PRPPPPRPGMHSPPPRPAPSPGTWESQ---PARSV-RLGGPGGGA--GGAGGGRVLECPS 115
Query: 89 EQMGKAPRVPVPPAGLSLPLKDPPASQAVSLLTEYAASLGIFLLFREDQPPGPCFPFSVS 148
++ P PPA L+D P + +Y G F +RE G FS S
Sbjct: 116 IRITSISPTPEPPAA----LEDNPDAWGDGSPRDYPPPEG-FGGYREAGGQGGGAFFSPS 170
Query: 149 AELDGVVCPAGTANSK----TEAKQQAALSALC-YIRSQLENP----------ESPQTSS 193
P ++ S ++A +AAL A C + S+L SP+ S
Sbjct: 171 --------PGSSSLSSWSFFSDASDEAALYAACDEVESELNEAASRFGLGSPLPSPRASP 222
Query: 194 RP 195
RP
Sbjct: 223 RP 224
>gi|239753839 PREDICTED: hypothetical protein [Homo sapiens]
Length = 257
Score = 38.1 bits (87), Expect = 0.023
Identities = 33/101 (32%), Positives = 40/101 (39%), Gaps = 7/101 (6%)
Query: 12 GSRRKPRLAASLQISPQPRPWRPLPAQAQSAWGPAPAPA--TYRAEGGWPQVSVLRDSGP 69
GS+ P L + W P PA+A A G PA RA G + R P
Sbjct: 64 GSQEHPGAGGPLCFPARSAAWGP-PARASRAAGRRAGPAGPPCRAPGRGRAAATRRSPAP 122
Query: 70 GAG----AGVGELGAARAWENLGEQMGKAPRVPVPPAGLSL 106
G AGV G A A + G + A R+P P G SL
Sbjct: 123 GTARGSPAGVERAGGATAASSAGTRSVPARRLPPPCGGTSL 163
>gi|110832843 TBP-associated factor 4 [Homo sapiens]
Length = 1085
Score = 38.1 bits (87), Expect = 0.023
Identities = 47/173 (27%), Positives = 60/173 (34%), Gaps = 31/173 (17%)
Query: 34 PLPAQAQSAWGPAPAPATYRAEGGWPQVSVLRDSGPGAGAGVGELGAARAWENLGEQMGK 93
P+PA A A GP PAPA G ++ GPG G G G G
Sbjct: 139 PVPAAAAVAAGPEPAPAGPAKPAGPAALAARAGPGPGPGPGPGP--------------GP 184
Query: 94 APRVPVPP-------AGLSLPLKDPPASQAVSLLTEYAASLGIFLLFREDQPPGPCFPFS 146
P P P +L A+ AVSL+ A+ L +P P
Sbjct: 185 GPGKPAGPGAAQTLNGSAALLNSHHAAAPAVSLVNNGPAA-----LLPLPKPAAPGTVIQ 239
Query: 147 VSAELDGVVCPAGTANSKTEAKQQAALSALCYIRSQLENPESPQTSSRPPLAP 199
+ PA A S A AA +A + P +P T +RPP P
Sbjct: 240 TPPFVGAAAPPAPAAPSPPAAPAPAAPAA-----APPPPPPAPATLARPPGHP 287
Score = 37.4 bits (85), Expect = 0.038
Identities = 46/178 (25%), Positives = 63/178 (35%), Gaps = 20/178 (11%)
Query: 27 PQPRPWRPLPAQAQSAWGPAPAPATYRAEGGWPQVSVLRDSGPGAGAGVGELGAARAWEN 86
P P P PA AQ+ APA A GG V GPGA A G
Sbjct: 291 PTAAPAVPPPAAAQNGGSAGAAPAPAPAAGG--PAGVSGQPGPGAAAAAPAPG------- 341
Query: 87 LGEQMGKAPRVPVPPAGLSLPLKDPPASQAVSLLTEYAASLGIFLLFREDQPPGPCFPFS 146
+ + K PPA +L PAS A S++ G PP P P
Sbjct: 342 VKAESPKRVVQAAPPAAQTLAASG-PASTAASMVIG-PTMQGALPSPAAVPPPAPGTPTG 399
Query: 147 VSAELDGVVCPAGTANSKTEAKQQAALSALCYIRSQLENPESPQTSSRPPLAPLSVEN 204
+ P G A + T++ + + IR+ L +PP P +++N
Sbjct: 400 L---------PKGAAGAVTQSLSRTPTATTSGIRATLTPTVLAPRLPQPPQNPTNIQN 448
>gi|45433499 zinc finger, DHHC-type containing 18 [Homo sapiens]
Length = 388
Score = 35.8 bits (81), Expect = 0.11
Identities = 28/68 (41%), Positives = 32/68 (47%), Gaps = 11/68 (16%)
Query: 20 AASLQISPQPRPWRPLPAQAQSAWGPAPAPATYRAEGGWPQVSVLRDSGPGAGAGVGELG 79
AA L SP R RP PA + + GP PAP A W SG G+G+G G LG
Sbjct: 13 AAPLPASPGAR--RPGPAASPTP-GPGPAPPAAPAPPRWSS------SGSGSGSGSGSLG 63
Query: 80 --AARAWE 85
R WE
Sbjct: 64 RRPRRKWE 71
>gi|38488720 DiGeorge syndrome critical region gene 8 [Homo sapiens]
Length = 773
Score = 35.4 bits (80), Expect = 0.15
Identities = 23/68 (33%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Query: 110 DPPASQAVSLLTEYAAS-LGIFLLFREDQPPGPCFPFSVSAELDGVVCPAGTANSKTEAK 168
+P V +L EY L + ++ + P PF S +DGV +GTA+SK AK
Sbjct: 506 NPNGKSEVCILHEYMQRVLKVRPVYNFFECENPSEPFGASVTIDGVTYGSGTASSKKLAK 565
Query: 169 QQAALSAL 176
+AA + L
Sbjct: 566 NKAARATL 573
>gi|112421108 capicua homolog [Homo sapiens]
Length = 1608
Score = 35.4 bits (80), Expect = 0.15
Identities = 30/88 (34%), Positives = 37/88 (42%), Gaps = 3/88 (3%)
Query: 35 LPAQAQSAWGPAPAPATYRA--EGGWPQVSVLRDSGPGAGAGVGELGAARAWENLGEQMG 92
LP Q Q A PAPAP T A G P S+ PG G++ AA A +
Sbjct: 832 LPQQLQVAPAPAPAPGTKAAAPSGPAPTTSIRFTLPPGTSTN-GKVLAATAPTPGIPILQ 890
Query: 93 KAPRVPVPPAGLSLPLKDPPASQAVSLL 120
P P P A P++ PP + LL
Sbjct: 891 SVPSAPPPKAQSVSPVQAPPPGGSAQLL 918
>gi|7662236 TSC22 domain family, member 2 [Homo sapiens]
Length = 780
Score = 35.0 bits (79), Expect = 0.19
Identities = 46/185 (24%), Positives = 65/185 (35%), Gaps = 13/185 (7%)
Query: 1 MASASQGADDDGSRRKPRLAASLQISPQPRPWRPLPAQAQSAWGPAPAPATYRAEGGWPQ 60
+ ++ QGA S L A Q+ P + +P PAQ QS P P G Q
Sbjct: 228 VVASMQGAHGPESGTDSSLTAVSQLPPSEKMSQPTPAQPQSFSVGQPQPPPPPVGGAVAQ 287
Query: 61 VSVLRDSGPGAGAGVGELGAARAWENLGEQMGKAP-RVPVPPAGLSL--PLKDPPASQAV 117
S PGA G + AA + G P +PP ++L P P
Sbjct: 288 SSAPLPPFPGAATGPQPMMAA---AQPSQPQGAGPGGQTLPPTNVTLAQPAMSLPPQPGP 344
Query: 118 SLLTEYAASLGIFLLFREDQPPGPCFPFSVSAELD-------GVVCPAGTANSKTEAKQQ 170
++ A F + PPG P S + + G+ P+ S T A
Sbjct: 345 AVGAPAAQQPQQFAYPQPQIPPGHLLPVQPSGQSEYLQQHVAGLQPPSPAQPSSTGAAAS 404
Query: 171 AALSA 175
A +A
Sbjct: 405 PATAA 409
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.136 0.426
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 28,308,162
Number of Sequences: 37866
Number of extensions: 1653477
Number of successful extensions: 7097
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 147
Number of HSP's that attempted gapping in prelim test: 6782
Number of HSP's gapped (non-prelim): 422
length of query: 583
length of database: 18,247,518
effective HSP length: 108
effective length of query: 475
effective length of database: 14,157,990
effective search space: 6725045250
effective search space used: 6725045250
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.