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Search of human proteins with 223941923
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|223941923 OTU domain containing 1 [Homo sapiens]
(481 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|223941923 OTU domain containing 1 [Homo sapiens] 997 0.0
gi|33457350 OTU domain containing 5 isoform a [Homo sapiens] 72 1e-12
gi|209977021 OTU domain containing 5 isoform b [Homo sapiens] 69 9e-12
gi|209977019 OTU domain containing 5 isoform b [Homo sapiens] 69 9e-12
gi|163965366 nascent polypeptide-associated complex alpha subuni... 63 5e-10
gi|116256464 hypothetical protein LOC343990 [Homo sapiens] 62 2e-09
gi|149773456 hypothetical protein LOC643314 [Homo sapiens] 60 3e-09
gi|122937321 UNC homeobox [Homo sapiens] 60 6e-09
gi|110349772 alpha 1 type I collagen preproprotein [Homo sapiens] 59 7e-09
gi|110832843 TBP-associated factor 4 [Homo sapiens] 59 7e-09
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 59 1e-08
gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 56 8e-08
gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi... 56 8e-08
gi|209977067 OTU domain containing 5 isoform c [Homo sapiens] 55 1e-07
gi|55741677 SET domain containing 1A [Homo sapiens] 54 2e-07
gi|149192871 OTU domain containing 3 [Homo sapiens] 54 3e-07
gi|111118976 collagen, type II, alpha 1 isoform 1 precursor [Hom... 54 4e-07
gi|111118974 collagen, type II, alpha 1 isoform 2 precursor [Hom... 54 4e-07
gi|110556644 zinc finger protein, multitype 1 [Homo sapiens] 53 5e-07
gi|169211815 PREDICTED: keratin associated protein 4.6 [Homo sap... 52 9e-07
gi|222418647 mucin 7, secreted precursor [Homo sapiens] 52 2e-06
gi|222418649 mucin 7, secreted precursor [Homo sapiens] 52 2e-06
gi|222418645 mucin 7, secreted precursor [Homo sapiens] 52 2e-06
gi|115298682 HBxAg transactivated protein 2 [Homo sapiens] 52 2e-06
gi|148237270 hypermethylated in cancer 1 isoform 2 [Homo sapiens] 51 2e-06
gi|61676186 hypermethylated in cancer 1 isoform 1 [Homo sapiens] 51 2e-06
gi|122937267 lemur tyrosine kinase 3 [Homo sapiens] 51 2e-06
gi|62177127 myosin heavy chain Myr 8 [Homo sapiens] 51 2e-06
gi|169217659 PREDICTED: similar to ectonucleotide pyrophosphatas... 51 3e-06
gi|169167316 PREDICTED: similar to ectonucleotide pyrophosphatas... 51 3e-06
>gi|223941923 OTU domain containing 1 [Homo sapiens]
Length = 481
Score = 997 bits (2578), Expect = 0.0
Identities = 481/481 (100%), Positives = 481/481 (100%)
Query: 1 MQLYSSVCTHYPAGAPGPTAAAPAPPAAATPFKVSLQPPGAAGAAPEPETGECQPAAAAE 60
MQLYSSVCTHYPAGAPGPTAAAPAPPAAATPFKVSLQPPGAAGAAPEPETGECQPAAAAE
Sbjct: 1 MQLYSSVCTHYPAGAPGPTAAAPAPPAAATPFKVSLQPPGAAGAAPEPETGECQPAAAAE 60
Query: 61 HREAAAVPAAKMPAFSSCFEVVSGAAAPASAAAGPPGASCKPPLPPHYTSTAQITVRALG 120
HREAAAVPAAKMPAFSSCFEVVSGAAAPASAAAGPPGASCKPPLPPHYTSTAQITVRALG
Sbjct: 61 HREAAAVPAAKMPAFSSCFEVVSGAAAPASAAAGPPGASCKPPLPPHYTSTAQITVRALG 120
Query: 121 ADRLLLHGPDPVPGAAGSAAAPRGRCLLLAPAPAAPVPPRRGSSAWLLEELLRPDCPEPA 180
ADRLLLHGPDPVPGAAGSAAAPRGRCLLLAPAPAAPVPPRRGSSAWLLEELLRPDCPEPA
Sbjct: 121 ADRLLLHGPDPVPGAAGSAAAPRGRCLLLAPAPAAPVPPRRGSSAWLLEELLRPDCPEPA 180
Query: 181 GLDATREGPDRNFRLSEHRQALAAAKHRGPAATPGSPDPGPGPWGEEHLAERGPRGWERG 240
GLDATREGPDRNFRLSEHRQALAAAKHRGPAATPGSPDPGPGPWGEEHLAERGPRGWERG
Sbjct: 181 GLDATREGPDRNFRLSEHRQALAAAKHRGPAATPGSPDPGPGPWGEEHLAERGPRGWERG 240
Query: 241 GDRCDAPGGDAARRPDPEAEAPPAGSIEAAPSSAAEPVIVSRSDPRDEKLALYLAEVEKQ 300
GDRCDAPGGDAARRPDPEAEAPPAGSIEAAPSSAAEPVIVSRSDPRDEKLALYLAEVEKQ
Sbjct: 241 GDRCDAPGGDAARRPDPEAEAPPAGSIEAAPSSAAEPVIVSRSDPRDEKLALYLAEVEKQ 300
Query: 301 DKYLRQRNKYRFHIIPDGNCLYRAVSKTVYGDQSLHRELREQTVHYIADHLDHFSPLIEG 360
DKYLRQRNKYRFHIIPDGNCLYRAVSKTVYGDQSLHRELREQTVHYIADHLDHFSPLIEG
Sbjct: 301 DKYLRQRNKYRFHIIPDGNCLYRAVSKTVYGDQSLHRELREQTVHYIADHLDHFSPLIEG 360
Query: 361 DVGEFIIAAAQDGAWAGYPELLAMGQMLNVNIHLTTGGRLESPTVSTMIHYLGPEDSLRP 420
DVGEFIIAAAQDGAWAGYPELLAMGQMLNVNIHLTTGGRLESPTVSTMIHYLGPEDSLRP
Sbjct: 361 DVGEFIIAAAQDGAWAGYPELLAMGQMLNVNIHLTTGGRLESPTVSTMIHYLGPEDSLRP 420
Query: 421 SIWLSWLSNGHYDAVFDHSYPNPEYDNWCKQTQVQRKRDEELAKSMAISLSKMYIEQNAC 480
SIWLSWLSNGHYDAVFDHSYPNPEYDNWCKQTQVQRKRDEELAKSMAISLSKMYIEQNAC
Sbjct: 421 SIWLSWLSNGHYDAVFDHSYPNPEYDNWCKQTQVQRKRDEELAKSMAISLSKMYIEQNAC 480
Query: 481 S 481
S
Sbjct: 481 S 481
>gi|33457350 OTU domain containing 5 isoform a [Homo sapiens]
Length = 571
Score = 71.6 bits (174), Expect = 1e-12
Identities = 67/240 (27%), Positives = 100/240 (41%), Gaps = 17/240 (7%)
Query: 210 PAATPGSPDPGPGPWGEEHLAERGPRGWERG-------GDRCDAPGGDAARRPDPEAEAP 262
P PG P GPG A G G G G C PG RR P A
Sbjct: 102 PCGGPGGPGGGPGDALGAAAAGVGAAGVVVGVGGAVGVGGCCSGPGHSKRRRQAPGVGAV 161
Query: 263 PAGSIEAAPSSAAEPVIVSRSDPRDEKLALYLAEVEKQDKYLRQ--RNKYRFHIIP---D 317
GS E A A+ A VE+Q+ + + R+K F I D
Sbjct: 162 GGGSPEREEVGAGYNSEDEYEAAAARIEAMDPATVEQQEHWFEKALRDKKGFIIKQMKED 221
Query: 318 GNCLYRAVSKTVYGDQSLHRELREQTVHYIADHLDHFSPLIEGDVGEFIIAAAQDGAWAG 377
G CL+RAV+ VYGDQ +H +R+ + Y+ + D+FS + D +I ++
Sbjct: 222 GACLFRAVADQVYGDQDMHEVVRKHCMDYLMKNADYFSNYVTEDFTTYINRKRKNNCHGN 281
Query: 378 YPELLAMGQMLN--VNIHLTTGGRLESPTVSTMIHYLGPEDSLRPSIWLSWLSNGHYDAV 435
+ E+ AM +M N V ++ + G ++T + G + I +S+ N HY++V
Sbjct: 282 HIEMQAMAEMYNRPVEVYQYSTGTSAVEPINT---FHGIHQNEDEPIRVSYHRNIHYNSV 338
>gi|209977021 OTU domain containing 5 isoform b [Homo sapiens]
Length = 566
Score = 68.9 bits (167), Expect = 9e-12
Identities = 65/238 (27%), Positives = 99/238 (41%), Gaps = 18/238 (7%)
Query: 210 PAATPGSPDPGPGPWGEEHLAERGPRGWERG-------GDRCDAPGGDAARRPDPEAEAP 262
P PG P GPG A G G G G C PG RR P A
Sbjct: 102 PCGGPGGPGGGPGDALGAAAAGVGAAGVVVGVGGAVGVGGCCSGPGHSKRRRQAPGVGAV 161
Query: 263 PAGSIEAAPSSAAEPVIVSRSDPRDEKLALYLAEVEKQDKYLRQ--RNKYRFHIIP---D 317
GS E A A+ A VE+Q+ + + R+K F I D
Sbjct: 162 GGGSPEREEVGAGYNSEDEYEAAAARIEAMDPATVEQQEHWFEKALRDKKGFIIKQMKED 221
Query: 318 GNCLYRAVSKTVYGDQSLHRELREQTVHYIADHLDHFSPLIEGDVGEFIIAAAQDGAWAG 377
G CL+RAV+ VYGDQ +H +R+ + Y+ + D+FS + D +I ++
Sbjct: 222 GACLFRAVADQVYGDQDMHEVVRKHCMDYLMKNADYFSNYVTEDFTTYINRKRKNNCHGN 281
Query: 378 YPELLAMGQMLNVNIHLTTGGRLESPTVSTMIHYLGPEDSLRPSIWLSWLSNGHYDAV 435
+ E+ AM +M N + + + + ++T + G + I +S+ N HY++V
Sbjct: 282 HIEMQAMAEMYNRPVEVY---QYSTEPINT---FHGIHQNEDEPIRVSYHRNIHYNSV 333
>gi|209977019 OTU domain containing 5 isoform b [Homo sapiens]
Length = 566
Score = 68.9 bits (167), Expect = 9e-12
Identities = 65/238 (27%), Positives = 99/238 (41%), Gaps = 18/238 (7%)
Query: 210 PAATPGSPDPGPGPWGEEHLAERGPRGWERG-------GDRCDAPGGDAARRPDPEAEAP 262
P PG P GPG A G G G G C PG RR P A
Sbjct: 102 PCGGPGGPGGGPGDALGAAAAGVGAAGVVVGVGGAVGVGGCCSGPGHSKRRRQAPGVGAV 161
Query: 263 PAGSIEAAPSSAAEPVIVSRSDPRDEKLALYLAEVEKQDKYLRQ--RNKYRFHIIP---D 317
GS E A A+ A VE+Q+ + + R+K F I D
Sbjct: 162 GGGSPEREEVGAGYNSEDEYEAAAARIEAMDPATVEQQEHWFEKALRDKKGFIIKQMKED 221
Query: 318 GNCLYRAVSKTVYGDQSLHRELREQTVHYIADHLDHFSPLIEGDVGEFIIAAAQDGAWAG 377
G CL+RAV+ VYGDQ +H +R+ + Y+ + D+FS + D +I ++
Sbjct: 222 GACLFRAVADQVYGDQDMHEVVRKHCMDYLMKNADYFSNYVTEDFTTYINRKRKNNCHGN 281
Query: 378 YPELLAMGQMLNVNIHLTTGGRLESPTVSTMIHYLGPEDSLRPSIWLSWLSNGHYDAV 435
+ E+ AM +M N + + + + ++T + G + I +S+ N HY++V
Sbjct: 282 HIEMQAMAEMYNRPVEVY---QYSTEPINT---FHGIHQNEDEPIRVSYHRNIHYNSV 333
>gi|163965366 nascent polypeptide-associated complex alpha subunit
isoform a [Homo sapiens]
Length = 2078
Score = 63.2 bits (152), Expect = 5e-10
Identities = 87/312 (27%), Positives = 107/312 (34%), Gaps = 49/312 (15%)
Query: 9 THYPAGAPGPTAAAPAPPA---AATPFKVSLQPPGAAGAAPEPETGECQPAAAAEHREAA 65
T P GAP P A P P AATPF P AA P + + PAA + A
Sbjct: 1002 TPSPKGAPTPPAVTPPSPKGSPAATPFPKGASTPPAA----TPPSPKGSPAATPLPKGAP 1057
Query: 66 AVPAAKMPAFSSCFEVVSGAAAPASAAAGPPGASCKP--------PLPPHYTSTAQ---- 113
PAA +P+ S AP AA PP P P+PP T +
Sbjct: 1058 TTPAATLPSPKGGPATPSLKGAPTPPAATPPSPKGGPATPSPKGAPMPPAATPPSPKGGL 1117
Query: 114 ITVRALGADRLLLHGPDPVPGAAGSAAAPRGRCLLLAPAPAAP-----VPPRRGSSAWLL 168
T GA P P P + P+G A P +P PP +G+
Sbjct: 1118 ATPPHKGAPTTPAATP-PSPKGGLATPPPKGAPTTPAATPPSPKGGLATPPPKGAPTTPA 1176
Query: 169 EELLRPD----CPEPAGLDATREGPDRNFRLSEHRQALAAAKHRG----PAATPGSPDPG 220
P P P G T + LA +G PAATP SP G
Sbjct: 1177 ATPPSPKGGLATPSPKGAPTTPAATP-----PSPKGGLATPSPKGAPTTPAATPPSPKGG 1231
Query: 221 ---PGPWGEEHLAERGPRGWERGGDRCDAPGGDAARRPDPEAEAPPA--GSIEAAP-SSA 274
P P G P +GG P G P P A PP+ G + P A
Sbjct: 1232 LATPSPKGAPTTPAATPPS-PKGGPATPPPKG----APTPPAATPPSLKGGLATPPHKGA 1286
Query: 275 AEPVIVSRSDPR 286
P +V+ P+
Sbjct: 1287 PNPAVVTPPSPK 1298
Score = 54.7 bits (130), Expect = 2e-07
Identities = 71/274 (25%), Positives = 90/274 (32%), Gaps = 60/274 (21%)
Query: 12 PAGAPGPTAAAPAPPAAAT--------PFKVSLQPPGAAGAAPEPETGECQPAAAAEHRE 63
P GAP P+A P P T P V+L P A P P+ ++ ++
Sbjct: 861 PKGAPTPSAVTPLSPKGVTLPPKETPTPSVVNLPFPKEGPATPAPKQAPALSMTSSSPKK 920
Query: 64 AAAVPAAK-MPAFSSCFEVVSGAAAPASAAAGPPGASCKPPLP-PHYTSTAQITVRALGA 121
A A PA K +PA S AP AA PP P P P + T
Sbjct: 921 ARATPAPKGIPASP------SPKGAPTPPAATPPSPKGGPATPSPKWAPTPPAAT----- 969
Query: 122 DRLLLHGPDPVPGAAGSAAAPRGRCLLLAPAPAAPVPPRRGSSAWLLEELLRPDCPEPAG 181
P P + +P+G AP P A PP P P P G
Sbjct: 970 --------PPSPKGGPATPSPKG-----APTPPAATPPSPKGG---------PATPSPKG 1007
Query: 182 LDATREGPDRNFRLSEHRQALAAAKHRGPAATPGSPDPGPGPWGEEHLAERGPRGWERGG 241
+ + S PAATP SP P A P+G
Sbjct: 1008 APTPPAVTPPSPKGSPAATPFPKGASTPPAATPPSPKGSPA-------ATPLPKG----- 1055
Query: 242 DRCDAPGGDAARRPDPEAEAPPAGSIEAAPSSAA 275
AP AA P P+ P S++ AP+ A
Sbjct: 1056 ----APTTPAATLPSPKG-GPATPSLKGAPTPPA 1084
Score = 51.6 bits (122), Expect = 2e-06
Identities = 77/281 (27%), Positives = 100/281 (35%), Gaps = 45/281 (16%)
Query: 15 APGPTAAAPAPPAAATPFKVSLQPPGAAGAAPEPETGECQPAAAAEHREAAAVPAAKMPA 74
AP A+P+P A TP + P A P P+ PAA + PA P
Sbjct: 926 APKGIPASPSPKGAPTPPAATPPSPKGGPATPSPKWAPTPPAATPPSPKGG--PATPSPK 983
Query: 75 FSSCFEVVSGAAAPASAAAGP----PGASCKPP--LPPHYTSTAQITVRALGADRLLLHG 128
+ AA P S GP P + PP PP + T GA
Sbjct: 984 GAP----TPPAATPPSPKGGPATPSPKGAPTPPAVTPPSPKGSPAATPFPKGASTPPAAT 1039
Query: 129 PDPVPGAAGSAAAPRGRCLLLAP-APAAPVP-PRRGSSAWLLEELLRPDC---PEPAGLD 183
P G+ + P+G AP PAA +P P+ G + L+ P P P G
Sbjct: 1040 PPSPKGSPAATPLPKG-----APTTPAATLPSPKGGPATPSLKGAPTPPAATPPSPKGGP 1094
Query: 184 ATREGPDRNFRLS----EHRQALAAAKHRGPAATPGSPDPGPGPWGEEHLAERGPRGWER 239
AT + + LA H+G TP + P P + LA P+G
Sbjct: 1095 ATPSPKGAPMPPAATPPSPKGGLATPPHKGAPTTPAATPPSP----KGGLATPPPKG--- 1147
Query: 240 GGDRCDAPGGDAARRPDPE---AEAPPAGSIEAAPSSAAEP 277
AP AA P P+ A PP G A + AA P
Sbjct: 1148 ------APTTPAATPPSPKGGLATPPPKG---APTTPAATP 1179
Score = 38.1 bits (87), Expect = 0.018
Identities = 77/304 (25%), Positives = 97/304 (31%), Gaps = 38/304 (12%)
Query: 12 PAGAPGPTAAAPAPPAAATPFKVSLQPPGAAG-AAPEPETGECQPAAAAEH--------- 61
P GAP P A P P TP + P G P + G PAA H
Sbjct: 1329 PKGAPTPPAVTP-PSPKGTPTLPATTPSSKGGPTTPSSKEGPTPPAATPSHKGGPAMTPP 1387
Query: 62 --REAAAVPAAKMPAFSSCFEVVSGAAAPAS-----AAAGPPGASCKPP-LPPHYTSTAQ 113
+ A+P+ K S +S APA+ AA P PP + P A
Sbjct: 1388 SPKRGPAIPSPKGDPTSPAVIPLSPKKAPATPVTREGAATPSKGDLTPPAVTPVSLKKAP 1447
Query: 114 ITVRALGADRLLLHGPDP-----VPGAAGSAAAPRGRCLLLAP--APAAPVPPRRGSSAW 166
T G DP P + AP+ +P APA P P A
Sbjct: 1448 ATSAPKGGPATPSSKGDPTLPAVTPPSPKEPPAPKQVATSSSPKKAPATPAP----MGAP 1503
Query: 167 LLEELLRPDCPEPAGLDATREGP--DRNFRLSEHRQALAAAKHR--GPAATPGSPDPGPG 222
L ++ E ++R P LS+ A A K PA T SP P
Sbjct: 1504 TLPAVIPSSPKEVPATPSSRRDPIAPTATLLSKKTPATLAPKEALIPPAMTVPSPKKTPA 1563
Query: 223 -PWGEEHLAERGPRGWERGGDRCDAPGGDAARRPDPEAEAPPAGSIEAAPSSAAEPVIVS 281
P +E A P E P E PPA + +P A P V+
Sbjct: 1564 IPTPKE--APATPSSKEASSPPAVTPSTYKGAPSPKELLIPPAVT-SPSPKEAPTPPAVT 1620
Query: 282 RSDP 285
P
Sbjct: 1621 PPSP 1624
Score = 34.7 bits (78), Expect = 0.20
Identities = 52/227 (22%), Positives = 68/227 (29%), Gaps = 47/227 (20%)
Query: 14 GAPGPTAAAPAPP----------AAATPFKVSLQPPGAAGAAPEPETGECQPAAAAEHRE 63
GAP P P P A TP + P + P P+ PA +
Sbjct: 1285 GAPNPAVVTPPSPKGGPATSPPKGAPTPPAATPPSPKGSPGTPPPKGAPTPPAVTPPSPK 1344
Query: 64 AAAVPAAKMPAFSSCFEVVSGAAAPASAAAGPP---GASCKPPLPPHYTSTAQITVRALG 120
A P+ S P AA P G + PP P
Sbjct: 1345 GTPTLPATTPSSKGGPTTPSSKEGPTPPAATPSHKGGPAMTPPSPK-------------- 1390
Query: 121 ADRLLLHGPDPVPGAAGSAAAPRGRCLLLAPAPAAPVPPRRGSSAWLLEELLRPDCPEPA 180
GP +P G +P + L+P A P R +A + L P P
Sbjct: 1391 ------RGP-AIPSPKGDPTSP--AVIPLSPKKAPATPVTREGAATPSKGDLTPPAVTPV 1441
Query: 181 GLDATREGPDRNFRLSEHRQALAAAKHRG----PAATPGSPDPGPGP 223
L ++ P S + A +G PA TP SP P P
Sbjct: 1442 SL---KKAP----ATSAPKGGPATPSSKGDPTLPAVTPPSPKEPPAP 1481
Score = 33.1 bits (74), Expect = 0.57
Identities = 45/174 (25%), Positives = 69/174 (39%), Gaps = 29/174 (16%)
Query: 17 GPTA-----AAPAP---PAAATPFKVSLQPPGAAGAAPEPETGECQPAAAAEHREAAAVP 68
GPTA APAP P P + Q ++ +P P + ++ + P
Sbjct: 1677 GPTALKEVLVAPAPESTPIITAPTRKGPQTKKSSATSP-PICPDPSAKNGSKGPLSTVAP 1735
Query: 69 AAKMPAFSSCFEVVSGAAAPASAAAGPPGASCKPPLPPHYTSTAQITVRALGADRLLLHG 128
A +P + G A S P G P PP ++ +T A +++L
Sbjct: 1736 APLLPVQKDSSKTAKGKDASHS----PKG----PLAPPESKASTPLTAAAF--EKVL--- 1782
Query: 129 PDPVPGAAGSAAAPRGRCLL-LAPAPAAPVPPRR----GSSAWLLEELLRPDCP 177
P P +A +AAP L LAP+P +PP++ S +LE +P P
Sbjct: 1783 --PKPESASVSAAPSPPVSLPLAPSPVPTLPPKQQFLPSSPGLVLESPSKPLAP 1834
Score = 32.7 bits (73), Expect = 0.75
Identities = 38/153 (24%), Positives = 56/153 (36%), Gaps = 12/153 (7%)
Query: 14 GAPGPTAAAPAPPAAATPFKVSLQPPGAAGAAPEPETGECQPAAA--AEHREAAAVPAAK 71
G PGPT P PA P + L A P P T P + A+P
Sbjct: 39 GQPGPTLPPPCSPA---PQQCPLSAANQASPFPSPSTIASTPLEVPFPQSSSGTALPLGT 95
Query: 72 MPAFSSCF-EVVSGAAAPASAAAGPPGASCKPPLPPHYTSTAQITVRAL---GADRLLLH 127
P + ++ +PA+ A P P L +S+A + + AL +
Sbjct: 96 APEAPTFLPNLIGPPISPAALALASP--MIAPTLKGTPSSSAPLALVALAPHSVQKSSAF 153
Query: 128 GPDPVPGAAGSAAAPRGRCLLLAPAPAAPVPPR 160
P+ + A A G + L+ AP AP P+
Sbjct: 154 PPNLLTSPPSVAVAESGSVITLS-APIAPSEPK 185
Score = 30.0 bits (66), Expect = 4.9
Identities = 44/185 (23%), Positives = 63/185 (34%), Gaps = 71/185 (38%)
Query: 18 PTAAAPAPPAAATPFKVSLQPPGAAGAAPEPETGECQPAAAAEHREAAAVPAAKMPAFSS 77
P +P+P A TP A P PE G PA
Sbjct: 1603 PAVTSPSPKEAPTP---------PAVTPPSPEKGPATPA--------------------- 1632
Query: 78 CFEVVSGAAAPASAAAGPPGASCKPPLPPHY-----TSTAQITVRALGADRLLLHGPDPV 132
P G PP+ P TS A +T + +GA V
Sbjct: 1633 -----------------PKGTPTSPPVTPSSLKDSPTSPASVTCK-MGA---------TV 1665
Query: 133 PGAAGSAAAPRG----RCLLLAPAP-AAPV---PPRRGSSAWLLEELLRPDCPEPAGLDA 184
P A+ A +G + +L+APAP + P+ P R+G P CP+P+ +
Sbjct: 1666 PQASKGLPAKKGPTALKEVLVAPAPESTPIITAPTRKGPQTKKSSATSPPICPDPSAKNG 1725
Query: 185 TREGP 189
++ GP
Sbjct: 1726 SK-GP 1729
>gi|116256464 hypothetical protein LOC343990 [Homo sapiens]
Length = 962
Score = 61.6 bits (148), Expect = 2e-09
Identities = 79/291 (27%), Positives = 104/291 (35%), Gaps = 41/291 (14%)
Query: 12 PAGAPGPTAAAPAPPAAATPFKVSLQPPGAAGAAPEPET-GECQPAAAAEHR------EA 64
P+ GP + P A TP + + G G APEPE E +P A E
Sbjct: 425 PSARDGPERSVPKE-AEPTPPVLPDEEKGPPGPAPEPEREAETEPERGAGTEPERIGTEP 483
Query: 65 AAVPAAKMPAFSSCFEVVSGAAAPASAAAGPPGASCKPPLPPHYTSTAQITVRALGADRL 124
+ PA PA SC + AA+ AA+ P A+ PP+ P
Sbjct: 484 STAPAPSPPAPKSCLKHRPAAASEGPAASPPLAAAESPPVEP------------------ 525
Query: 125 LLHGPDPVPGAAGSAAAPRGRCLLLAPAPAAPVPPRRGSSAWLLEELLRPDCPEPAGLDA 184
GP + A + P+ PA A P R + E +
Sbjct: 526 ---GPGSLDAEAAAPERPKAERAEAPPAGAERAAPERKAERGGAELRGAKKFSVSSCRAR 582
Query: 185 TREGPDRNFRLSEHRQALAAAKH--RGPAATP---GSPDPGPGPWGEEHLAERGPRGWER 239
R G R + R LA + R AA G P+P G LAERGP +
Sbjct: 583 PRPGVSRPLERASGRLPLARSGPVWRSEAALDDLQGLPEPQHAKPGPRKLAERGP---QD 639
Query: 240 GGDRCDAPGGDAARRPDPEAEAPPAGSIEAAPSSAAEPVIVSRSDPRDEKL 290
GDR +P G R P+ A G+ E P +A EP +P KL
Sbjct: 640 SGDRAASPAGP---RKSPQEAAAAPGTREPCP-AAQEPAPSEDRNPFPVKL 686
Score = 47.4 bits (111), Expect = 3e-05
Identities = 79/280 (28%), Positives = 95/280 (33%), Gaps = 60/280 (21%)
Query: 14 GAPGPTAAA-PAPPAAATPFKVSLQPPGAAGAAPEPETGECQPAAAAEHREAAAVPAAKM 72
G PG ++ PA P A P P P P G P ++ A PA
Sbjct: 326 GVPGEDPSSRPATPELAEPESA----PTLRVEPPSPPEGPPNPGPDGGKQDGEAPPAGPC 381
Query: 73 -PAFSSCFEVVSGAAAPASA--AAGPPGASCKPPLPPHYTSTAQITVRALGADRLLLHGP 129
PA EVV AS A P G + P P TS A G +R +
Sbjct: 382 APATDKAEEVVCAPEDVASPFPTAIPEGDTTPPETDPAATSEAPSARD--GPERSVPKEA 439
Query: 130 DPVPGAA-GSAAAPRGRCLLLAPAPA--APVPPRRGSSAWLLEELLRPDCPEPAGLD--- 183
+P P P G AP P A P RG+ PE G +
Sbjct: 440 EPTPPVLPDEEKGPPGP----APEPEREAETEPERGAGTE----------PERIGTEPST 485
Query: 184 ATREGPDRNFRLSEHRQALAAAKHRGPAATPG-----SP--DPGPGPWGEEHLAERGPRG 236
A P +HR A A+ GPAA+P SP +PGPG E A P+
Sbjct: 486 APAPSPPAPKSCLKHRPAAAS---EGPAASPPLAAAESPPVEPGPGSLDAEAAAPERPKA 542
Query: 237 WERGGDRCDAPGGDAARRPDPEAEAPPAGSIEAAPSSAAE 276
AEAPPAG+ AAP AE
Sbjct: 543 --------------------ERAEAPPAGAERAAPERKAE 562
Score = 35.4 bits (80), Expect = 0.12
Identities = 51/192 (26%), Positives = 65/192 (33%), Gaps = 34/192 (17%)
Query: 13 AGAPG-----PTAAAPAPPAAATPFKVSLQPPGAA-----GAAPEPETGECQPAAAAEHR 62
A APG P A PAP PF V L+ + GA+ E + + A R
Sbjct: 658 AAAPGTREPCPAAQEPAPSEDRNPFPVKLRSTSLSLKYRDGASQEVKGVKRYSAEVRLER 717
Query: 63 EAAAVPAAKMPAFSSCFEVVSGAAAPASAAAG----PPGASCKPPLPPHYTSTAQITVRA 118
+P + + + G AP+ G P S KPPLP +
Sbjct: 718 SLTVLPKEEKCPLGTA-PALRGTRAPSDQGKGKARPPEPLSSKPPLPR----------KP 766
Query: 119 LGADRLLLHGPDPVPGAAGSAAAPRGRCLLLAPAPAAPVPPRRGSSAWLLEELLRPDC-- 176
L L H P P P A PR P A P RRG+ L P
Sbjct: 767 LLQSFTLPHQPAP-PDAGPGEREPRKE-----PRTAEKRPLRRGAEKSLPPAATGPGADG 820
Query: 177 -PEPAGLDATRE 187
P P + TR+
Sbjct: 821 QPAPPWITVTRQ 832
Score = 34.7 bits (78), Expect = 0.20
Identities = 51/177 (28%), Positives = 63/177 (35%), Gaps = 30/177 (16%)
Query: 6 SVCTHYPAGAP-GPTAAAPAPPAAATPFKV---SLQPPGAAGAAPEPETGECQPAAAAE- 60
S H PA A GP A+ P A + P + SL AA P+ E E PA A
Sbjct: 496 SCLKHRPAAASEGPAASPPLAAAESPPVEPGPGSLDAEAAAPERPKAERAEAPPAGAERA 555
Query: 61 ------HREAAAVPAAKMPAFSSCFEVVSGAAAPASAAAGP-PGASCKPPL----PPHYT 109
R A + AK + SSC A P + P AS + PL P +
Sbjct: 556 APERKAERGGAELRGAKKFSVSSC------RARPRPGVSRPLERASGRLPLARSGPVWRS 609
Query: 110 STAQITVRAL--------GADRLLLHGPDPVPGAAGSAAAPRGRCLLLAPAPAAPVP 158
A ++ L G +L GP A S A PR A AP P
Sbjct: 610 EAALDDLQGLPEPQHAKPGPRKLAERGPQDSGDRAASPAGPRKSPQEAAAAPGTREP 666
Score = 30.4 bits (67), Expect = 3.7
Identities = 44/162 (27%), Positives = 58/162 (35%), Gaps = 17/162 (10%)
Query: 124 LLLHGPDPVPGAAGSAAAP-RGRCLLLAPAPAAPVPP---RRGSSAWLLEELLRPDCPEP 179
LL P+ P + AP RG P P AP+PP R A L E
Sbjct: 269 LLEVSPEERPSSGQQDVAPDRGP----EPGPPAPLPPPGGARARRARLQHSSALTASVEE 324
Query: 180 AGLDATREGPDRNFRLSEHRQALAAAKHRGPAATPGSPDPGPGPWGEEHLAERGPRG--- 236
G+ E P E + +A R +P P PGP G + E P G
Sbjct: 325 GGVPG--EDPSSRPATPELAEPESAPTLRVEPPSPPEGPPNPGPDGGKQDGEAPPAGPCA 382
Query: 237 --WERGGDRCDAPGGDAARRPD--PEAEAPPAGSIEAAPSSA 274
++ + AP A+ P PE + P + AA S A
Sbjct: 383 PATDKAEEVVCAPEDVASPFPTAIPEGDTTPPETDPAATSEA 424
>gi|149773456 hypothetical protein LOC643314 [Homo sapiens]
Length = 1427
Score = 60.5 bits (145), Expect = 3e-09
Identities = 81/298 (27%), Positives = 101/298 (33%), Gaps = 41/298 (13%)
Query: 12 PAGAPGPTAAAPAPPAAATPFKVSLQPPGAAGAAPEPETGECQPAAAAEHREAAAVPAAK 71
PA A PT P PAAA P P AA PE T PAAA E PAA
Sbjct: 1042 PAAAV-PTPEEPTSPAAAVPTPEEPTSPAAAVPTPEEPT---SPAAAVPTPEEPTSPAAA 1097
Query: 72 MPAFSSCFEVVSGAAAPASAAAGPPGASCKPPLPPHYTSTAQITVRALGADRLLLHGPDP 131
+P AA P P A+ P P + A T + P+
Sbjct: 1098 VPTPEE--PTSPAAAVPTPEEPASPAAAVPTPEEPASPAAAVPTPEEPAFPAPAVPTPEE 1155
Query: 132 VPGAAGSAAAPRGRCLLLAPAPAAPVPPRRGSSAWLLEELLRP-----DCPEPAGLDATR 186
AA + P +PA A P P S A ++ L P P PA + AT
Sbjct: 1156 SASAAVAVPTPEESA---SPAAAVPTPAESASFAAVVATLEEPTSPAASVPTPAAMVATL 1212
Query: 187 E---GPDRNFRLSEHRQALAAA------------------KHRGPAATPGSPDPGPGPWG 225
E P + SE +LAAA + AA +P+ P
Sbjct: 1213 EEFTSPAASVPTSEEPASLAAAVSNPEEPTSPAAAVPTLEEPTSSAAAVLTPEELSSPAA 1272
Query: 226 EEHLAERGPRGWERGGDRCDAPGGDAARRPDPEAEAPPAGS-----IEAAPSSAAEPV 278
E P + P AA P PE A PA S + A P++A P+
Sbjct: 1273 SVPTPEE-PASPAAAVSNLEEPASPAAAVPTPEVAAIPAASVPTPEVPAIPAAAVPPM 1329
Score = 36.6 bits (83), Expect = 0.052
Identities = 65/272 (23%), Positives = 88/272 (32%), Gaps = 18/272 (6%)
Query: 20 AAAPAPPAAATPFKVSLQPPGAAGAAPEPETGECQPA-AAAEHREAAAVPAAKMPAFSSC 78
AA AP A P P G A A E PA AAA +E + A P +++
Sbjct: 899 AAVSAPERATVPAVTVSVPEGTAAVAAVSSPEETAPAVAAAITQEGMSAVAGFSPEWAA- 957
Query: 79 FEVVSGAAAPASAAAGP--PGASCKPPLPPHYTSTAQITVRALGADRLLLHGPDPVPGAA 136
+ GP P + P P + T + + P+ A
Sbjct: 958 LAITVPITEEDGTPEGPVTPATTVHAPEEPDTAAVRVSTPEEPASPAAAVPTPEEPTSPA 1017
Query: 137 GSAAAPRGRCLLLAPAPAAPVPPRRGSSAWLL---EELLRPDCPEPAGLDATREGPDRNF 193
+ P +PA A P P S A + EE P P + T P
Sbjct: 1018 AAVPTPEEP---TSPAAAVPPPEEPTSPAAAVPTPEEPTSPAAAVPTPEEPT--SPAAAV 1072
Query: 194 RLSEHRQALAAA-----KHRGPAATPGSPDPGPGPWGEEHLAERGPRGWERGGDRCDAPG 248
E + AAA + PAA +P+ P E P + P
Sbjct: 1073 PTPEEPTSPAAAVPTPEEPTSPAAAVPTPEEPTSPAAAVPTPEE-PASPAAAVPTPEEPA 1131
Query: 249 GDAARRPDPEAEAPPAGSIEAAPSSAAEPVIV 280
AA P PE A PA ++ SA+ V V
Sbjct: 1132 SPAAAVPTPEEPAFPAPAVPTPEESASAAVAV 1163
Score = 36.2 bits (82), Expect = 0.068
Identities = 37/136 (27%), Positives = 49/136 (36%), Gaps = 27/136 (19%)
Query: 18 PTAAAPAPPAAATPFKVSLQPPGA-AGAAPEPETGECQPAAAAEHREAAAVPAAKMPAFS 76
PT PA PAAA +L+ P + A A P PE PAA+ E A+PAA +P
Sbjct: 1275 PTPEEPASPAAAVS---NLEEPASPAAAVPTPEVAAI-PAASVPTPEVPAIPAAAVPPME 1330
Query: 77 SCFEV---------------VSGAAAPASAAAGPPGASCKPPLPPHYTSTAQITVRALGA 121
+ +S P A G K L ++T
Sbjct: 1331 EVSPIGVPFLGVSAHTDSVPISEEGTPVLEEASSTGMWIKEDLDSLVFGIKEVT------ 1384
Query: 122 DRLLLHGPDPVPGAAG 137
+LHG P+ AG
Sbjct: 1385 -STVLHGKVPLAATAG 1399
>gi|122937321 UNC homeobox [Homo sapiens]
Length = 531
Score = 59.7 bits (143), Expect = 6e-09
Identities = 80/291 (27%), Positives = 102/291 (35%), Gaps = 52/291 (17%)
Query: 11 YPAGAPGPTAAAPAPPAAATPFKVSLQPPGAAGAAPEPETG--------ECQP--AAAAE 60
+ +GA G A P P A + P +GA P+P G C P A AA
Sbjct: 260 HASGAAGTAPAPPGEPPAPGTCDPAFYPSQRSGAGPQPRPGRPADKDAASCGPGAAVAAV 319
Query: 61 HREAAAVPAAKMPAFSSCF-----EVVSGAAAPASAAAGPPGASCKPPLPPHYTSTAQIT 115
R AA +P A + S + + A A+AAAG A P P
Sbjct: 320 ERGAAGLPKASPFSVESLLSDSPPRRKAASNAAAAAAAGLDFAPGLPCAPRTLIGKGHFL 379
Query: 116 VRALGADRLLLHGPDPVPGAAGSAAAPRGRCLLLAPAPAA-PVPPRRGSSAWLLEELLRP 174
+ + L + G AG AP+ PAPA P PP + S
Sbjct: 380 LYPITQPLGFLVPQAALKGGAGLEPAPKD----APPAPAVPPAPPAQASFGAF------- 428
Query: 175 DCPEPAGLDATREGPDRNFRLSEHRQALAAAKHRGPAATPGSPDPGPGPWGEEHLAERGP 234
P G PD F A + A+PG+P P P P+ + A
Sbjct: 429 --SGPGG------APDSAF----------ARRSPDAVASPGAPAPAPAPFRDLASAAATE 470
Query: 235 RGWERGGDRCDAPGGDAARRPDPEAEAPPAGSIEAAPSSAAEPVIVSRSDP 285
G GGD DA G A P P A +P G PS A EP +P
Sbjct: 471 GG---GGDCADA--GTAGPAPPPPAPSPRPG--PRPPSPAEEPATCGVPEP 514
>gi|110349772 alpha 1 type I collagen preproprotein [Homo sapiens]
Length = 1464
Score = 59.3 bits (142), Expect = 7e-09
Identities = 83/271 (30%), Positives = 96/271 (35%), Gaps = 51/271 (18%)
Query: 12 PAGAPGPTAAAPAPPAAATPFKVSLQPPGAAGAAPEPETGECQPAAAAEHREAAAV---- 67
P+G GPT A AP P PPG AG A P + QP A E +A A
Sbjct: 786 PSGPAGPTGARGAPGDRGEP-----GPPGPAGFA-GPPGADGQPGAKGEPGDAGAKGDAG 839
Query: 68 ---PAAKMPAFSSCFEVVSGAAAPASAAAGPPGASCKPPL-----PPHYTSTAQITVRAL 119
PA V + A A +AGPPGA+ P PP + A
Sbjct: 840 PPGPAGPAGPPGPIGNVGAPGAKGARGSAGPPGATGFPGAAGRVGPPGPSGNA------- 892
Query: 120 GADRLLLHGPDPVPGAAG--SAAAPRGRCLLLAPA--PAAPVPPRRGSSAWLLEELLRPD 175
GP PG AG PRG PA P PP A E P
Sbjct: 893 --------GPPGPPGPAGKEGGKGPRGE---TGPAGRPGEVGPPGPPGPA---GEKGSPG 938
Query: 176 CPEPAGLDATREGPDRNFRLSEHRQALAAAKHRGPAATPGSPDPG--PGPWGEEHLA-ER 232
PAG T GP ++ R + RG PG P P PG G + ER
Sbjct: 939 ADGPAGAPGT-PGPQ---GIAGQRGVVGLPGQRGERGFPGLPGPSGEPGKQGPSGASGER 994
Query: 233 GPRGWERGGDRCDAPGGDAARRPDPEAEAPP 263
GP G G P G++ R P AE P
Sbjct: 995 GPPG-PMGPPGLAGPPGESGREGAPGAEGSP 1024
Score = 45.8 bits (107), Expect = 9e-05
Identities = 72/262 (27%), Positives = 88/262 (33%), Gaps = 55/262 (20%)
Query: 12 PAGAPGPTAAAPAPPAAATPFKVSLQPPGAAGAAPEPETGECQPAAAAEHREAAAVPAAK 71
PAG PGP AP A + S PPGA G G P + + A P
Sbjct: 846 PAGPPGPIGNVGAPGAKGA--RGSAGPPGATGF--PGAAGRVGPPGPSGN---AGPPGPP 898
Query: 72 MPAFSSCFEVVSGAAAPAS--AAAGPPGASCKPPLPPHYTSTAQITVRALGADRLLLHGP 129
PA + G PA GPPG PP P + GAD GP
Sbjct: 899 GPAGKEGGKGPRGETGPAGRPGEVGPPG----PPGPAGEKGSP-------GAD-----GP 942
Query: 130 DPVPGAAGSAAAPRGRCLLLAPAPAAPVPPRRGSSAWLLEELLRPDCPEPAGLDATREGP 189
PG G P+G + +P +RG + P P P+G + ++GP
Sbjct: 943 AGAPGTPG----PQG---IAGQRGVVGLPGQRGERGF-------PGLPGPSG-EPGKQGP 987
Query: 190 DRNFRLSEHRQALAAAKHRGPAATPGSPDPGPGPWGEEHLAERGPRGWERGGDRCDAPGG 249
A+ RGP G P GP GE G G E R +PG
Sbjct: 988 S------------GASGERGPPGPMGPPGLA-GPPGES--GREGAPGAEGSPGRDGSPGA 1032
Query: 250 DAARRPDPEAEAPPAGSIEAAP 271
R A P A AP
Sbjct: 1033 KGDRGETGPAGPPGAPGAPGAP 1054
Score = 42.7 bits (99), Expect = 7e-04
Identities = 78/295 (26%), Positives = 93/295 (31%), Gaps = 51/295 (17%)
Query: 12 PAGAPGPTA-----AAPAPPAAATPFKVSLQP--------PGAAGAAPEP-ETGECQPAA 57
P GAPGP P P A+ P P G AG P E G P
Sbjct: 192 PPGAPGPQGFQGPPGEPGEPGASGPMGPRGPPGPPGKNGDDGEAGKPGRPGERGPPGPQG 251
Query: 58 AAEHREAAAVPAAKMPAFSSCFEVVSGAAAPASAAAGPPGASCKPPLPPHYTSTAQITVR 117
A A +P K S + G A GP G +P P + Q+ R
Sbjct: 252 ARGLPGTAGLPGMKGHRGFSGLDGAKGDA-------GPAGPKGEPGSPGENGAPGQMGPR 304
Query: 118 ALGADRLLLHGPDPV--------------PGAAGSAAAPRGRCLLLAPAPAAPVPPRRGS 163
L +R P P PG G A P + A A P PR
Sbjct: 305 GLPGERGRPGAPGPAGARGNDGATGAAGPPGPTGPAGPPGFPGAVGAKGEAGPQGPRGSE 364
Query: 164 SAWLLEELLRPDCPEPAGLDATREGPDRNFRLSEHRQALAAAKHRGPAATPGSPDPGPGP 223
+ P P PAG GP N A A G A PG P GP
Sbjct: 365 GPQGVRG--EPGPPGPAG----AAGPAGNPGADGQPGAKGANGAPGIAGAPGFPG-ARGP 417
Query: 224 WGEEHLAERGPRGWERGGDRCDAPG--GDAARRPDPEAEAPPAGSIEAAPSSAAE 276
G + GP G + APG GD + +P P G ++ P A E
Sbjct: 418 SGPQ--GPGGPPGPKGNSGEPGAPGSKGDTGAKGEP----GPVG-VQGPPGPAGE 465
Score = 42.0 bits (97), Expect = 0.001
Identities = 81/301 (26%), Positives = 98/301 (32%), Gaps = 57/301 (18%)
Query: 14 GAPGPTAAAPAPPAAATPFKVSLQPPGAAGAA-------PEPETGECQPAAAAEHREAAA 66
G+PGP +P A P + L PGA G P+ +TG PA
Sbjct: 512 GSPGPAGPKGSPGEAGRPGEAGL--PGAKGLTGSPGSPGPDGKTGPPGPAGQDGRPGPPG 569
Query: 67 VPAAKMPAFSSCFEVVSGAAAPASAAA-----GPPGA-----------SCKPPLPPHYTS 110
P A+ A F GAA A GPPGA + PP P
Sbjct: 570 PPGARGQAGVMGFPGPKGAAGEPGKAGERGVPGPPGAVGPAGKDGEAGAQGPPGPAGPAG 629
Query: 111 TAQITVRALGADRLLLHGPDPVPGAAGSAAAPRGRCLLLAPAPAAPVPPRRGSSAWLLEE 170
A L GP PG AG L AP P+ RG + E
Sbjct: 630 ERGEQGPAGSPGFQGLPGPAGPPGEAGKPGEQGVPGDLGAPGPSGA----RGERGFPGER 685
Query: 171 LLRPDCPEPAGLDATREGPDRNFRLSEHRQALAAAKHRGPAATPGSPDPGPGPWGEEHLA 230
++ P PAG P + +G A PG+P P +
Sbjct: 686 GVQGP-PGPAGPRGANGAPGNDGA-------------KGDAGAPGAPGSQGAPGLQGMPG 731
Query: 231 ERGPRGWE-RGGDRCDA--------PGGDAAR-RPDPEAEAPPAGSI----EAAPSSAAE 276
ERG G GDR DA PG D R P PAG+ E+ PS A
Sbjct: 732 ERGAAGLPGPKGDRGDAGPKGADGSPGKDGVRGLTGPIGPPGPAGAPGDKGESGPSGPAG 791
Query: 277 P 277
P
Sbjct: 792 P 792
Score = 41.2 bits (95), Expect = 0.002
Identities = 75/284 (26%), Positives = 88/284 (30%), Gaps = 75/284 (26%)
Query: 14 GAPGPTAA--------APAPPAAATPFKVSLQPPGAAGAA-PEPETGECQPAAAAEHREA 64
GAPGP A A PP P PPG GA + E G P + +
Sbjct: 314 GAPGPAGARGNDGATGAAGPPGPTGP----AGPPGFPGAVGAKGEAGPQGPRGSEGPQGV 369
Query: 65 AAVPAAKMPAFSSCFEVVSGAAAPASAAAGPPGASCKPPLPPHYTSTAQITVRALGADRL 124
P PA GAA PA G PGA +P GA
Sbjct: 370 RGEPGPPGPA---------GAAGPA----GNPGADGQP-----------------GAK-- 397
Query: 125 LLHGPDPVPGAAGSAAAPRGRCLLLAPAPAAPVPPRRGSSAWLLEELLRPDCPEPAGLDA 184
G + PG AG+ P R P P P+ S P P G
Sbjct: 398 ---GANGAPGIAGAPGFPGARGPSGPQGPGGPPGPKGNSG--------EPGAPGSKGDTG 446
Query: 185 TR--------EGPDRNFRLSEHRQALAAAKHRGPAATPGSPDP--GPG----PWGEEHLA 230
+ +GP R A GP PG P GPG P +
Sbjct: 447 AKGEPGPVGVQGPPGPAGEEGKR---GARGEPGPTGLPGPPGERGGPGSRGFPGADGVAG 503
Query: 231 ERGPRGWERGGDRCDAPGGDAARRPDP-EAEAPPAGSIEAAPSS 273
+GP G ERG P G P EA P A + +P S
Sbjct: 504 PKGPAG-ERGSPGPAGPKGSPGEAGRPGEAGLPGAKGLTGSPGS 546
Score = 38.9 bits (89), Expect = 0.010
Identities = 79/285 (27%), Positives = 93/285 (32%), Gaps = 53/285 (18%)
Query: 12 PAGAPGPTAAAPAPPAAATPFKVSLQPPGAAGAAPEPETGECQPAAAAEHREAAAVPAAK 71
PAG PG P PP A PGA G A P G P A R +P +
Sbjct: 915 PAGRPGEVGP-PGPPGPAG----EKGSPGADGPAGAP--GTPGPQGIAGQRGVVGLPGQR 967
Query: 72 -------MPAFSSCFEVVSGAAAPASAAAGPPGASCKPPLP-PHYTSTAQITVRALGADR 123
+P S E + AS GPPG P L P S + A G+
Sbjct: 968 GERGFPGLPGPSG--EPGKQGPSGASGERGPPGPMGPPGLAGPPGESGREGAPGAEGSP- 1024
Query: 124 LLLHGPDPVPGAAGSA-----AAPRGRCLLLAP-APAAPVPPRRGSSAWLLEELLRPDCP 177
G D PGA G A P G AP AP AP P + E
Sbjct: 1025 ----GRDGSPGAKGDRGETGPAGPPG-----APGAPGAPGPVGPAGKSGDRGETGPAGPA 1075
Query: 178 EPAGLDATR-----EGPDRNFRLSEHRQALAAAKHRGPAATPGSPDPGPGPWGEEHLAER 232
P G R +GP + + + HRG + G P P PG GE+
Sbjct: 1076 GPVGPVGARGPAGPQGPRGDKGETGEQGDRGIKGHRGFSGLQGPPGP-PGSPGEQ----- 1129
Query: 233 GPRGWERGGDRCDAPGGDAARRPDPEAEAPPAGSIEAAPSSAAEP 277
GP G A G R P A AP + P P
Sbjct: 1130 GPSG---------ASGPAGPRGPPGSAGAPGKDGLNGLPGPIGPP 1165
>gi|110832843 TBP-associated factor 4 [Homo sapiens]
Length = 1085
Score = 59.3 bits (142), Expect = 7e-09
Identities = 76/279 (27%), Positives = 91/279 (32%), Gaps = 68/279 (24%)
Query: 3 LYSSVCTHYPAGAPGPTAAAPAPPAAATPFKVSLQPPGAAGAAPEPE-TGECQPAAAAEH 61
L + V + PAGA G AAPA GA GAAPEP G +P
Sbjct: 58 LGNHVVSGSPAGAAGAGPAAPAE--------------GAPGAAPEPPPAGRARPGGGGPQ 103
Query: 62 REAAAVPAAKMPAFSSCFEVVSGAAAPASAAAGPPGASCKPPLPPHYTSTAQITVRALGA 121
R P + PA A PP A +PP S A + A A
Sbjct: 104 RPGPPSPRRPL--------------VPAGPA--PPAAKLRPPPEGSAGSCAPVPAAAAVA 147
Query: 122 DRLLLHGPDPVPGAAGSAAAPRGRCLLLAPAPAAPVPPRRGSSAWLLEELLRPDCPEPAG 181
GP+P P A P P P P G P +PAG
Sbjct: 148 A-----GPEPAPAGPAKPAGPAALAARAGPGPGPGPGPGPG-----------PGPGKPAG 191
Query: 182 LDATREGPDRNFRLSEHRQALAAAK--HRGPAATPGSPDPG-PGPWGEEHLAERGPRGWE 238
A + L+ H A A + GPAA P P PG +
Sbjct: 192 PGAAQTLNGSAALLNSHHAAAPAVSLVNNGPAALLPLPKPAAPGTVIQT----------- 240
Query: 239 RGGDRCDAPGGDAARRPDPEAEAPPAGSIEAAPSSAAEP 277
P AA P P A +PPA AAP++A P
Sbjct: 241 -------PPFVGAAAPPAPAAPSPPAAPAPAAPAAAPPP 272
Score = 55.5 bits (132), Expect = 1e-07
Identities = 88/298 (29%), Positives = 106/298 (35%), Gaps = 82/298 (27%)
Query: 14 GAPGP----TAAAPAPPAAATPFKVSLQPPGAAGAAPEPETGECQPAAAAEHREAAAVPA 69
G P P A PAPPAA L+PP PE G C P AA AAV A
Sbjct: 106 GPPSPRRPLVPAGPAPPAA------KLRPP------PEGSAGSCAPVPAA-----AAVAA 148
Query: 70 AKMPAFSSCFEVVSGAAAPASAAAGP-------PGASCKPPLPP---------------H 107
PA + + AA A A GP PG P P H
Sbjct: 149 GPEPAPAGPAKPAGPAALAARAGPGPGPGPGPGPGPGPGKPAGPGAAQTLNGSAALLNSH 208
Query: 108 YTSTAQITVRALGADRLLLHGPDPVPGAAGS---------AAAPRGRCLLLAPAPAAPVP 158
+ + +++ G LL P P P A G+ AAAP PAPAAP P
Sbjct: 209 HAAAPAVSLVNNGPAALL---PLPKPAAPGTVIQTPPFVGAAAP--------PAPAAPSP 257
Query: 159 PRRGSSAWLLEELLRPDCPEPAGLDATREGPDRNFRLSEHRQALAAAKHRGPAATPGSPD 218
P + A P P PA L P + AAA++ G A +P
Sbjct: 258 PAAPAPA-APAAAPPPPPPAPATLARPPGHPAGPPTAAPAVPPPAAAQNGGSAGAAPAPA 316
Query: 219 PGPGPWGEEHLAERGPRGWERGGDRCDAPG-GDAARRPDPEAEA-PPAGSIEAAPSSA 274
P G GP G PG G AA P P +A P ++AAP +A
Sbjct: 317 PAAG----------GPAGVS------GQPGPGAAAAAPAPGVKAESPKRVVQAAPPAA 358
Score = 55.1 bits (131), Expect = 1e-07
Identities = 52/181 (28%), Positives = 66/181 (36%), Gaps = 18/181 (9%)
Query: 12 PAGAPGPTAAAPAPPAAATPFKVSLQPPGAAGAAPEPETGECQPAAAAEHREAAAVPAAK 71
P AP P A A APP +PPG P PAAA A A PA
Sbjct: 257 PPAAPAPAAPAAAPPPPPPAPATLARPPGHPAGPPTAAPAVPPPAAAQNGGSAGAAPAPA 316
Query: 72 MPAFSSCFEVVSGAAAPASAAAGP-PGASCKPP------LPPHYTSTAQITVRALGADRL 124
A VSG P +AAA P PG + P PP + A + A +
Sbjct: 317 PAAGGPA--GVSGQPGPGAAAAAPAPGVKAESPKRVVQAAPPAAQTLAASGPASTAASMV 374
Query: 125 LLHGPDPVPGAAGSAAAPRGRCLLLAPAPAAPVPPRRGSSAWLLEELLRPDCPEPAGLDA 184
+ GP AA P PAP P +G++ + + L R +G+ A
Sbjct: 375 I--GPTMQGALPSPAAVP-------PPAPGTPTGLPKGAAGAVTQSLSRTPTATTSGIRA 425
Query: 185 T 185
T
Sbjct: 426 T 426
Score = 47.8 bits (112), Expect = 2e-05
Identities = 74/261 (28%), Positives = 88/261 (33%), Gaps = 67/261 (25%)
Query: 8 CTHYPAGA-----PGPTAAAPAPPAAATPFKVSLQPPGAAGAAPEPETGECQPAAA---- 58
C PA A P P A PA PA P G P P G +PA
Sbjct: 137 CAPVPAAAAVAAGPEPAPAGPAKPAGPAALAARAGPGPGPGPGPGPGPGPGKPAGPGAAQ 196
Query: 59 ----------AEHREAAAV------PAAKMP-----AFSSCFEV---VSGAAAPASAAAG 94
+ H A AV PAA +P A + + V AA PA AA
Sbjct: 197 TLNGSAALLNSHHAAAPAVSLVNNGPAALLPLPKPAAPGTVIQTPPFVGAAAPPAPAAPS 256
Query: 95 PPG-------ASCKPPLPPHYTSTAQITVRALGADRLLLHGPDPVPGAAGSAAAPRGRCL 147
PP A+ PP PP + A+ G P P AAA G
Sbjct: 257 PPAAPAPAAPAAAPPPPPPAPATLARPPGHPAGP-------PTAAPAVPPPAAAQNGGSA 309
Query: 148 LLAPAPAAPVPPRRGSSAWLLEELLRPDCPEPAGLDAT------REGPDRNFRLS-EHRQ 200
APAPA P G A + + P P A E P R + + Q
Sbjct: 310 GAAPAPA----PAAGGPAGVSGQ------PGPGAAAAAPAPGVKAESPKRVVQAAPPAAQ 359
Query: 201 ALAAAKHRGPAATPGSPDPGP 221
LAA+ GPA+T S GP
Sbjct: 360 TLAAS---GPASTAASMVIGP 377
>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 1124
Score = 58.9 bits (141), Expect = 1e-08
Identities = 84/296 (28%), Positives = 106/296 (35%), Gaps = 36/296 (12%)
Query: 16 PGPTAAAPAPPAAATPFKVSLQPPGAAG---AAPEPETGECQPAAAAEHREAAAVPAAKM 72
P P AP P A+ P S PP A AAP + PA+ A P A
Sbjct: 669 PSPPVQAPFSPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPP 728
Query: 73 PAFSSCFEVVSG--AAAPASAAAGPPGASCK---------PPLPPHYTSTAQITVRALGA 121
P + +V A+ P S +A PP PP PP + + A
Sbjct: 729 PLAAPPLQVPPSPPASPPMSPSATPPPRVPPLLAAPPLQVPPSPPASLPMSPLAKPPPQA 788
Query: 122 DRLLLHGP---DPVPGAAGSAAAPRGRCLLLAPAPAAPVPPRRGS--SAWLLEELLRPDC 176
L P P P A+ AP L +P A PP+ +A LL+ + P
Sbjct: 789 PPALATPPLQALPSPPASFPGQAPFSPSASLPMSPLATPPPQAPPVLAAPLLQ--VPPSP 846
Query: 177 PEPAGLDATRE----GPDRNFRLSEHRQALAAAKHRGPAATPGSPDPGPGPWGEEHLAER 232
P L A R GPD + ALA P+ +P S GP G A
Sbjct: 847 PASPTLQAPRRPPTPGPDTSVSGPRLTLALAPGPPPPPSRSPSSTLSGPDLAGHSSSATS 906
Query: 233 GP---RGWERGGDRCDAPGGDAARRPDPEAEAPPAGSIEAAPSSAAEPVIVSRSDP 285
P RG++ G P G AA P P+AE A AA S P + R P
Sbjct: 907 TPEELRGYDSG------PEGGAAASPPPDAEL--AACHPAAWSRGPAPPLAFRGAP 954
Score = 50.4 bits (119), Expect = 3e-06
Identities = 77/298 (25%), Positives = 100/298 (33%), Gaps = 62/298 (20%)
Query: 12 PAGAPGPTAAAPAPPAAATPFKVSLQPPGAAGAAPEPETGECQPAAAAEHREAAAVPAAK 71
P A P P+PPA+ ++ PP + PA A +A P A
Sbjct: 759 PLLAAPPLQVPPSPPASLPMSPLAKPPP------------QAPPALATPPLQALPSPPAS 806
Query: 72 MPAFSSCFEVVSGAAAPASAAAGPPGASCKPPLPPHYTS-TAQITVRALGADRLLLHGPD 130
P + A+ P S A PP P PP + Q+ + L
Sbjct: 807 FPGQA---PFSPSASLPMSPLATPP-----PQAPPVLAAPLLQVPPSPPASPTLQAPRRP 858
Query: 131 PVPGAAGSAAAPRGRCLLLAPAPAAPVPPRRGSSAWL----LEELLRPDCPEPAGLDATR 186
P PG S + PR L LA AP P PP R S+ L L P L
Sbjct: 859 PTPGPDTSVSGPR---LTLALAPGPPPPPSRSPSSTLSGPDLAGHSSSATSTPEELRGYD 915
Query: 187 EGPDRNFRLSEHRQALAAAKH-----RGPA------ATPGSPDPGP---GPWGEEHLA-- 230
GP+ S A AA H RGPA PG+P P P GP + L
Sbjct: 916 SGPEGGAAASPPPDAELAACHPAAWSRGPAPPLAFRGAPGAPLPWPPATGPGSADGLCTI 975
Query: 231 ----------------ERGPRGWERGGDRCDAPGGDAARRPDPEAEAP--PAGSIEAA 270
+ GP GG G A+ R +A P G+++A+
Sbjct: 976 YETEGPESATPAPGALDPGPSPGTSGGKAAAGAGAGASSRSPKQARLGELPLGALQAS 1033
Score = 40.0 bits (92), Expect = 0.005
Identities = 58/210 (27%), Positives = 79/210 (37%), Gaps = 27/210 (12%)
Query: 15 APGPTAAAPAPPAAATPFKVSLQPPGAAGAAPEPETGECQPAAAAEHREAAAVPAAKMPA 74
A G P P +A P + P + +A E T E PAA R +A + PA
Sbjct: 182 AAGTEVGLPRPAPSARPRPPTEGPRKSVSSASEHSTTEPSPAA---RRRPSAGGGLQRPA 238
Query: 75 FSSCFEVVSGAAAP-ASAAAGPPGASCKPPLPPHYTSTAQITVRALGADRLLLHGPDPVP 133
S +S +A P +S A P A P P H + ++AL ++ D P
Sbjct: 239 SRS----LSSSATPLSSPARSGPSARGTPRAPAHPSQPKPKGLQALRPPQVTPPRKDAAP 294
Query: 134 GAAGSAAAPRGRCLLLAPAP----AAPVPPRRGSSAWLLEELLRPDCPEPAGLDATREGP 189
+++P L P+P A PVPP ++A L L P P L P
Sbjct: 295 ALGPLSSSP-----LATPSPSGTKARPVPP-PDNAATPLPATLPPSPPLATPLPLAPPSP 348
Query: 190 DRNFRLSEHRQALAAAKHRGPAATPGSPDP 219
L Q L + P ATP S P
Sbjct: 349 SAPPSL----QTLPS-----PPATPPSQAP 369
Score = 39.3 bits (90), Expect = 0.008
Identities = 72/300 (24%), Positives = 97/300 (32%), Gaps = 67/300 (22%)
Query: 22 APAPPAAATPFKVSLQPPGAAGAAPEPETGECQPAAA-----------------AEHREA 64
+P+ PA+ P LQ P + A+P +T PA + A H
Sbjct: 443 SPSRPASTPPDSPPLQAPLSLPASPPLQT-SLSPAVSPLSSPLTIHPLQALSSLASHSPQ 501
Query: 65 AAVPAAKMPAFSSCFEVVSGAAAPASAAAGPPGASCKPPL--------PPHYTSTAQITV 116
A + + MP E S A P+ PP + PPL PP T++A +T
Sbjct: 502 APLSSLIMPP----LETQSSLAPPSLQT--PPASLTTPPLENLPSLAPPPLQTASAPLTT 555
Query: 117 RALGADRLLLHGPDPVPGAAGSAAAPRGRCLLLAPAPAAP----VPPRRGSSAWLLEELL 172
L P P + + P + P P AP PP +G + L L
Sbjct: 556 PHLETPPCPAPCPLQAPPSPLTTPPPETPSSIATPPPQAPPALASPPLQGLPSPPLSPLA 615
Query: 173 RPDCPEPAGLDATREGPDRNFRLSEHRQALAAAKHRGPAA-------TPGSPDPGPGPWG 225
P P L + S LA + P A P SP P P
Sbjct: 616 TPPPQAPPXLALPPLQAPPSPPASPPLSPLATPSPQAPNALAVHLLQAPFSPPPSP---- 671
Query: 226 EEHLAERGPRGWERGGDRCDAPGGDAARRPDPEAEAPPAGSIEAAPSSAAEPVIVSRSDP 285
AP A P + PP+ +A PS AA P+ V S P
Sbjct: 672 -----------------PVQAPFSPPASPPVSPSATPPS---QAPPSLAAPPLQVPPSPP 711
Score = 36.6 bits (83), Expect = 0.052
Identities = 66/270 (24%), Positives = 86/270 (31%), Gaps = 58/270 (21%)
Query: 21 AAPAPPAAATPFKVSLQPPGAAGAAPEPETGECQPAAAAEHREAAAVPAAKMPAFSSCFE 80
AA PAA P ++ +PPG+ P P A R A A +
Sbjct: 12 AAARTPAARAPGLLTPRPPGSPRPPP--------PVTPAALRVLGAAGAVGRKPLAERAG 63
Query: 81 VVSGAAAPASA-AAGP---PGASCKPPLPPHYTSTAQITVRALGADRLLLHGPDPVPGAA 136
+ GA P SA AGP G S + P S + R A P PV
Sbjct: 64 GIGGATIPESAPRAGPTRSAGTSSRNP-----ASRPPASGRGERAPPAKNTSPGPVSSPG 118
Query: 137 GSAAAPRGRCLLLAPAPAAPVPPRRGSSAWLLEELLRPDCPEPAGLDATREGPDRNFRLS 196
++ R P P L ++ LR E E P R+
Sbjct: 119 RASGTTR-------PGP-------------LGQKGLRISAEETVARGKATEAPKRS---- 154
Query: 197 EHRQALAAAKHRGPAA-TPGSPDPGPGPWGEEHLAERGPRGWERGGDRCDAPGGDAARRP 255
AL+A R + TPG+P P +A R G P + RP
Sbjct: 155 ----ALSAGARRDTSGPTPGTPSPA--------MARRS----RAAGTEVGLPRPAPSARP 198
Query: 256 DPEAEAPPAGSIEAAPSSAAEPVIVSRSDP 285
P E P A+ S EP +R P
Sbjct: 199 RPPTEGPRKSVSSASEHSTTEPSPAARRRP 228
>gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 855
Score = 55.8 bits (133), Expect = 8e-08
Identities = 89/312 (28%), Positives = 109/312 (34%), Gaps = 62/312 (19%)
Query: 12 PAGAPGPTAAAPAPPAAATPFKVSLQPPGAAGAAPEPETGECQPAAAAEHREAAAV---- 67
PA A P A P+PPA+ PP + A P P+ P A A H A
Sbjct: 398 PALALPPLQAPPSPPAS---------PPLSPLATPSPQA----PNALAVHLLQAPFSPPP 444
Query: 68 -PAAKMPAFSSCFEVVSGAAAPASAAAG---------PPGASCKPPLPPHYTSTAQITVR 117
P + P VS +A P S A PP PP+ P T Q
Sbjct: 445 SPPVQAPFSPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQ-APP 503
Query: 118 ALGADRLLLHGPD---------------PVPGAAGSAAAPRGRCLLLAPAPAAPVPPRRG 162
L A L L P P P A+ AP L +P A PP+
Sbjct: 504 PLAAPPLQLAKPPPQAPPALATPPLQALPSPPASFPGQAPFSPSASLPMSPLATPPPQAP 563
Query: 163 S--SAWLLEELLRPDCPEPAGLDATRE----GPDRNFRLSEHRQALAAAKHRGPAATPGS 216
+A LL+ + P P L A R GPD + ALA P+ +P S
Sbjct: 564 PVLAAPLLQ--VPPSPPASPTLQAPRRPPTPGPDTSVSGPRLTLALAPGPPPPPSRSPSS 621
Query: 217 PDPGPGPWGEEHLAERGP---RGWERGGDRCDAPGGDAARRPDPEAEAPPAGSIEAAPSS 273
GP G A P RG++ G P G AA P P+AE A AA S
Sbjct: 622 TLSGPDLAGHSSSATSTPEELRGYDSG------PEGGAAASPPPDAEL--AACHPAAWSR 673
Query: 274 AAEPVIVSRSDP 285
P + R P
Sbjct: 674 GPAPPLAFRGAP 685
Score = 53.9 bits (128), Expect = 3e-07
Identities = 79/298 (26%), Positives = 102/298 (34%), Gaps = 65/298 (21%)
Query: 12 PAGAPGPTAAAPAPPAAATPFKVSLQPPGAAGAAPEPETGECQPAAAAEHREAAAVPAAK 71
P+ P P A PP AA P +++ PP + PA A +A P A
Sbjct: 493 PSATPPPQAP---PPLAAPPLQLAKPPP------------QAPPALATPPLQALPSPPAS 537
Query: 72 MPAFSSCFEVVSGAAAPASAAAGPPGASCKPPLPPHYTS-TAQITVRALGADRLLLHGPD 130
P + A+ P S A PP P PP + Q+ + L
Sbjct: 538 FPGQA---PFSPSASLPMSPLATPP-----PQAPPVLAAPLLQVPPSPPASPTLQAPRRP 589
Query: 131 PVPGAAGSAAAPRGRCLLLAPAPAAPVPPRRGSSAWL----LEELLRPDCPEPAGLDATR 186
P PG S + PR L LA AP P PP R S+ L L P L
Sbjct: 590 PTPGPDTSVSGPR---LTLALAPGPPPPPSRSPSSTLSGPDLAGHSSSATSTPEELRGYD 646
Query: 187 EGPDRNFRLSEHRQALAAAKH-----RGPA------ATPGSPDPGP---GPWGEEHLA-- 230
GP+ S A AA H RGPA PG+P P P GP + L
Sbjct: 647 SGPEGGAAASPPPDAELAACHPAAWSRGPAPPLAFRGAPGAPLPWPPATGPGSADGLCTI 706
Query: 231 ----------------ERGPRGWERGGDRCDAPGGDAARRPDPEAEAP--PAGSIEAA 270
+ GP GG G A+ R +A P G+++A+
Sbjct: 707 YETEGPESATPAPGALDPGPSPGTSGGKAAAGAGAGASSRSPKQARLGELPLGALQAS 764
Score = 43.9 bits (102), Expect = 3e-04
Identities = 80/315 (25%), Positives = 100/315 (31%), Gaps = 54/315 (17%)
Query: 15 APGPTAAAPAPPAAATPFKVSLQPPGAAGAAPEPETGECQPAAAAEHREAAAVPAAKMPA 74
A G P P +A P + P + +A E T E PAA + +
Sbjct: 182 AAGTEVGLPRPAPSARPRPPTEGPRKSVSSASEHSTTEPSPAARRRPSAGGGLQRPASRS 241
Query: 75 FSSCFEVVSGAAAPASAAAGPPGASCKPP----------LPPHYTSTAQITVRALGADRL 124
SS +S A +A G P A P PP T + ALG
Sbjct: 242 LSSSATPLSSPARSGPSARGTPRAPAHPSQPKPKGLQALRPPQVTPPRKDAAPALGP--- 298
Query: 125 LLHGP--DPVPGAAGSAAAPRG----------RCLLLAPAPAAPVPPRRGSSAWLLEELL 172
L P P P AA + AP C L P P AP P S L+ L
Sbjct: 299 LSSSPLATPSPSAALQSQAPPTLPATPHSSSLTCQLATPLPLAPPSPSAPPS---LQTLP 355
Query: 173 RPDCPEPAGLDATREGP----DRNFRLSEHRQALAA---------------AKHRGPAAT 213
P P+ + P +F S LA A PA+
Sbjct: 356 SPPATPPSQATTSLGSPTLQATHSFLPSPPLSPLATPPPQAPPALALPPLQAPPSPPASP 415
Query: 214 PGSPDPGPGPWGEEHLAE---RGPRGWERGGDRCDAPGGDAARRPDPEAEAPPAGSIEAA 270
P SP P P LA + P AP A P + PP+ +A
Sbjct: 416 PLSPLATPSPQAPNALAVHLLQAPFS-PPPSPPVQAPFSPPASPPVSPSATPPS---QAP 471
Query: 271 PSSAAEPVIVSRSDP 285
PS AA P+ V S P
Sbjct: 472 PSLAAPPLQVPPSPP 486
Score = 36.6 bits (83), Expect = 0.052
Identities = 66/270 (24%), Positives = 86/270 (31%), Gaps = 58/270 (21%)
Query: 21 AAPAPPAAATPFKVSLQPPGAAGAAPEPETGECQPAAAAEHREAAAVPAAKMPAFSSCFE 80
AA PAA P ++ +PPG+ P P A R A A +
Sbjct: 12 AAARTPAARAPGLLTPRPPGSPRPPP--------PVTPAALRVLGAAGAVGRKPLAERAG 63
Query: 81 VVSGAAAPASA-AAGP---PGASCKPPLPPHYTSTAQITVRALGADRLLLHGPDPVPGAA 136
+ GA P SA AGP G S + P S + R A P PV
Sbjct: 64 GIGGATIPESAPRAGPTRSAGTSSRNP-----ASRPPASGRGERAPPAKNTSPGPVSSPG 118
Query: 137 GSAAAPRGRCLLLAPAPAAPVPPRRGSSAWLLEELLRPDCPEPAGLDATREGPDRNFRLS 196
++ R P P L ++ LR E E P R+
Sbjct: 119 RASGTTR-------PGP-------------LGQKGLRISAEETVARGKATEAPKRS---- 154
Query: 197 EHRQALAAAKHRGPAA-TPGSPDPGPGPWGEEHLAERGPRGWERGGDRCDAPGGDAARRP 255
AL+A R + TPG+P P +A R G P + RP
Sbjct: 155 ----ALSAGARRDTSGPTPGTPSPA--------MARRS----RAAGTEVGLPRPAPSARP 198
Query: 256 DPEAEAPPAGSIEAAPSSAAEPVIVSRSDP 285
P E P A+ S EP +R P
Sbjct: 199 RPPTEGPRKSVSSASEHSTTEPSPAARRRP 228
>gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo
sapiens]
Length = 816
Score = 55.8 bits (133), Expect = 8e-08
Identities = 89/312 (28%), Positives = 109/312 (34%), Gaps = 62/312 (19%)
Query: 12 PAGAPGPTAAAPAPPAAATPFKVSLQPPGAAGAAPEPETGECQPAAAAEHREAAAV---- 67
PA A P A P+PPA+ PP + A P P+ P A A H A
Sbjct: 359 PALALPPLQAPPSPPAS---------PPLSPLATPSPQA----PNALAVHLLQAPFSPPP 405
Query: 68 -PAAKMPAFSSCFEVVSGAAAPASAAAG---------PPGASCKPPLPPHYTSTAQITVR 117
P + P VS +A P S A PP PP+ P T Q
Sbjct: 406 SPPVQAPFSPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQ-APP 464
Query: 118 ALGADRLLLHGPD---------------PVPGAAGSAAAPRGRCLLLAPAPAAPVPPRRG 162
L A L L P P P A+ AP L +P A PP+
Sbjct: 465 PLAAPPLQLAKPPPQAPPALATPPLQALPSPPASFPGQAPFSPSASLPMSPLATPPPQAP 524
Query: 163 S--SAWLLEELLRPDCPEPAGLDATRE----GPDRNFRLSEHRQALAAAKHRGPAATPGS 216
+A LL+ + P P L A R GPD + ALA P+ +P S
Sbjct: 525 PVLAAPLLQ--VPPSPPASPTLQAPRRPPTPGPDTSVSGPRLTLALAPGPPPPPSRSPSS 582
Query: 217 PDPGPGPWGEEHLAERGP---RGWERGGDRCDAPGGDAARRPDPEAEAPPAGSIEAAPSS 273
GP G A P RG++ G P G AA P P+AE A AA S
Sbjct: 583 TLSGPDLAGHSSSATSTPEELRGYDSG------PEGGAAASPPPDAEL--AACHPAAWSR 634
Query: 274 AAEPVIVSRSDP 285
P + R P
Sbjct: 635 GPAPPLAFRGAP 646
Score = 53.9 bits (128), Expect = 3e-07
Identities = 79/298 (26%), Positives = 102/298 (34%), Gaps = 65/298 (21%)
Query: 12 PAGAPGPTAAAPAPPAAATPFKVSLQPPGAAGAAPEPETGECQPAAAAEHREAAAVPAAK 71
P+ P P A PP AA P +++ PP + PA A +A P A
Sbjct: 454 PSATPPPQAP---PPLAAPPLQLAKPPP------------QAPPALATPPLQALPSPPAS 498
Query: 72 MPAFSSCFEVVSGAAAPASAAAGPPGASCKPPLPPHYTS-TAQITVRALGADRLLLHGPD 130
P + A+ P S A PP P PP + Q+ + L
Sbjct: 499 FPGQA---PFSPSASLPMSPLATPP-----PQAPPVLAAPLLQVPPSPPASPTLQAPRRP 550
Query: 131 PVPGAAGSAAAPRGRCLLLAPAPAAPVPPRRGSSAWL----LEELLRPDCPEPAGLDATR 186
P PG S + PR L LA AP P PP R S+ L L P L
Sbjct: 551 PTPGPDTSVSGPR---LTLALAPGPPPPPSRSPSSTLSGPDLAGHSSSATSTPEELRGYD 607
Query: 187 EGPDRNFRLSEHRQALAAAKH-----RGPA------ATPGSPDPGP---GPWGEEHLA-- 230
GP+ S A AA H RGPA PG+P P P GP + L
Sbjct: 608 SGPEGGAAASPPPDAELAACHPAAWSRGPAPPLAFRGAPGAPLPWPPATGPGSADGLCTI 667
Query: 231 ----------------ERGPRGWERGGDRCDAPGGDAARRPDPEAEAP--PAGSIEAA 270
+ GP GG G A+ R +A P G+++A+
Sbjct: 668 YETEGPESATPAPGALDPGPSPGTSGGKAAAGAGAGASSRSPKQARLGELPLGALQAS 725
Score = 46.6 bits (109), Expect = 5e-05
Identities = 76/294 (25%), Positives = 105/294 (35%), Gaps = 42/294 (14%)
Query: 15 APGPTAAAPAPPAAATPFKVSLQPPGAAGAAPEPETGECQPAAAAEHREAAAVPAAKMPA 74
A G P P +A P + P + +A E T E PAA R +A + PA
Sbjct: 173 AAGTEVGLPRPAPSARPRPPTEGPRKSVSSASEHSTTEPSPAA---RRRPSAGGGLQRPA 229
Query: 75 FSSCFEVVSGAAAP-ASAAAGPPGASCKPPLPPHYTSTAQITVRALGADRLLLHGPDPVP 133
S +S +A P +S A P A P P H + ++AL ++ D P
Sbjct: 230 SRS----LSSSATPLSSPARSGPSARGTPRAPAHPSQPKPKGLQALRPPQVTPPRKDAAP 285
Query: 134 GAAGSAAAPRGRCLLLAPAPAAPVPPRRGSSAWLLEELLRPDCPEPAGLDATREGP---- 189
+++P L P+P+AP P S L+ L P P+ + P
Sbjct: 286 ALGPLSSSP-----LATPSPSAPPSPSAPPS---LQTLPSPPATPPSQATTSLGSPTLQA 337
Query: 190 DRNFRLSEHRQALAA---------------AKHRGPAATPGSPDPGPGPWGEEHLAE--- 231
+F S LA A PA+ P SP P P LA
Sbjct: 338 THSFLPSPPLSPLATPPPQAPPALALPPLQAPPSPPASPPLSPLATPSPQAPNALAVHLL 397
Query: 232 RGPRGWERGGDRCDAPGGDAARRPDPEAEAPPAGSIEAAPSSAAEPVIVSRSDP 285
+ P AP A P + PP+ +A PS AA P+ V S P
Sbjct: 398 QAPFS-PPPSPPVQAPFSPPASPPVSPSATPPS---QAPPSLAAPPLQVPPSPP 447
Score = 38.9 bits (89), Expect = 0.010
Identities = 62/266 (23%), Positives = 81/266 (30%), Gaps = 59/266 (22%)
Query: 21 AAPAPPAAATPFKVSLQPPGAAGAAPEPETGECQPAAAAEHREAAAVPAAKMPAFSSCFE 80
AA PAA P ++ +PPG+ P P A R A A +
Sbjct: 12 AAARTPAARAPGLLTPRPPGSPRPPP--------PVTPAALRVLGAAGAVGRKPLAERAG 63
Query: 81 VVSGAAAPASAAAGPPGASCKPPLPPHYTSTAQITVRALGADRLLLHGPDPVPGAAGSAA 140
+ GA P SA P + +PP A G + PG S
Sbjct: 64 GIGGATIPESAPRAGPTRTSRPP--------------ASGRGERAPPAKNTSPGPVSSPG 109
Query: 141 APRGRCLLLAPAPAAPVPPRRGSSAWLLEELLRPDCPEPAGLDATREGPDRNFRLSEHRQ 200
G P P L ++ LR E E P R+
Sbjct: 110 RASG---TTRPGP-------------LGQKGLRISAEETVARGKATEAPKRS-------- 145
Query: 201 ALAAAKHRGPAA-TPGSPDPGPGPWGEEHLAERGPRGWERGGDRCDAPGGDAARRPDPEA 259
AL+A R + TPG+P P +A R G P + RP P
Sbjct: 146 ALSAGARRDTSGPTPGTPSPA--------MARRS----RAAGTEVGLPRPAPSARPRPPT 193
Query: 260 EAPPAGSIEAAPSSAAEPVIVSRSDP 285
E P A+ S EP +R P
Sbjct: 194 EGPRKSVSSASEHSTTEPSPAARRRP 219
Score = 32.0 bits (71), Expect = 1.3
Identities = 35/151 (23%), Positives = 52/151 (34%), Gaps = 12/151 (7%)
Query: 13 AGAPGPTAAAPAPPAAATPFKVSLQPPGAAGAAPEPETGECQPAAAAEHREAAAVPAAKM 72
+ +P T + APP+ + P + P A + T P A H + P +
Sbjct: 291 SSSPLATPSPSAPPSPSAPPSLQTLPSPPATPPSQATTSLGSPTLQATHSFLPSPPLS-- 348
Query: 73 PAFSSCFEVVSGAAAPASAAAGPPGASCKPPLPPHYTSTAQ----ITVRALGADRLLLHG 128
P + + A P A PP PPL P T + Q + V L A
Sbjct: 349 PLATPPPQAPPALALPPLQA--PPSPPASPPLSPLATPSPQAPNALAVHLLQAP----FS 402
Query: 129 PDPVPGAAGSAAAPRGRCLLLAPAPAAPVPP 159
P P P + P + + P + PP
Sbjct: 403 PPPSPPVQAPFSPPASPPVSPSATPPSQAPP 433
>gi|209977067 OTU domain containing 5 isoform c [Homo sapiens]
Length = 349
Score = 55.1 bits (131), Expect = 1e-07
Identities = 33/119 (27%), Positives = 61/119 (51%), Gaps = 6/119 (5%)
Query: 317 DGNCLYRAVSKTVYGDQSLHRELREQTVHYIADHLDHFSPLIEGDVGEFIIAAAQDGAWA 376
DG CL+RAV+ VYGDQ +H +R+ + Y+ + D+FS + D +I ++
Sbjct: 4 DGACLFRAVADQVYGDQDMHEVVRKHCMDYLMKNADYFSNYVTEDFTTYINRKRKNNCHG 63
Query: 377 GYPELLAMGQMLNVNIHLTTGGRLESPTVSTMIHYLGPEDSLRPSIWLSWLSNGHYDAV 435
+ E+ AM +M N + + + + ++T + G + I +S+ N HY++V
Sbjct: 64 NHIEMQAMAEMYNRPVEVY---QYSTEPINT---FHGIHQNEDEPIRVSYHRNIHYNSV 116
>gi|55741677 SET domain containing 1A [Homo sapiens]
Length = 1707
Score = 54.3 bits (129), Expect = 2e-07
Identities = 64/220 (29%), Positives = 81/220 (36%), Gaps = 25/220 (11%)
Query: 21 AAPAPPAAATPFKVSLQPPGAAGAAPEPETGECQPAAAAEHREAAAVPAAKMP---AFSS 77
A+PA PA T PP A PEP G PA + R ++ +P P +
Sbjct: 1113 ASPARPAGPT----EESPPSAPLRPPEPPAGPPAPAPRPDERPSSPIPLLPPPKKRRKTV 1168
Query: 78 CFEVVSGAAAPASAAAGPPGASCKPPLPPHYTSTAQITVRALGADR--LLLHGPDPVPGA 135
F + AP A PP A P + T+R L D L+ P+ V
Sbjct: 1169 SFSAIEVVPAPEPPPATPPQAKFPGPASRKAPRGVERTIRNLPLDHASLVKSWPEEVSRG 1228
Query: 136 AGSAAAPRGRCL------------LLAPAPAAPVPPRRGSSAWLLEELLRPDCPEPAGLD 183
S A RGR L A A P RRG A L + + E + +
Sbjct: 1229 GRSRAGGRGRLTEEEEAEPGTEVDLAVLADLALTPARRGLPA--LPAVEDSEATETSD-E 1285
Query: 184 ATREGPDRNFRLSEHRQALAAAKHRGPAATPGSPDPGPGP 223
A R P + L EH AL A K PA P+P P P
Sbjct: 1286 AERPRPLLSHILLEHNYAL-AVKPTPPAPALRPPEPVPAP 1324
>gi|149192871 OTU domain containing 3 [Homo sapiens]
Length = 398
Score = 53.9 bits (128), Expect = 3e-07
Identities = 36/123 (29%), Positives = 62/123 (50%), Gaps = 13/123 (10%)
Query: 317 DGNCLYRAVSKTVYGDQSLHRELREQTVHYIADHLDHFSPLIEGDV--GEFIIAAAQDGA 374
DGNCL+RA+ + G H + R++TV Y+ + F P +E D+ + + + A+ G
Sbjct: 73 DGNCLFRALGDQLEGHSRNHLKHRQETVDYMIKQREDFEPFVEDDIPFEKHVASLAKPGT 132
Query: 375 WAGYPELLAMGQ--MLNVNIHLTTGGRLESPTVSTMIHYLGPEDSLRPSIWLSWLSNGHY 432
+AG ++A + LNV IH +L +P + G E S + +++ HY
Sbjct: 133 FAGNDAIVAFARNHQLNVVIH-----QLNAP----LWQIRGTEKSSVRELHIAYRYGEHY 183
Query: 433 DAV 435
D+V
Sbjct: 184 DSV 186
>gi|111118976 collagen, type II, alpha 1 isoform 1 precursor [Homo
sapiens]
Length = 1487
Score = 53.5 bits (127), Expect = 4e-07
Identities = 81/286 (28%), Positives = 94/286 (32%), Gaps = 48/286 (16%)
Query: 12 PAGAPGPTAA-------APAPPAAATPFKVSLQPPGAAGAA-------PEPETGECQPAA 57
P GAPG P PA A K + PPG AG+A ETG PA
Sbjct: 775 PEGAPGKDGGRGLTGPIGPPGPAGANGEKGEVGPPGPAGSAGARGAPGERGETGPPGPAG 834
Query: 58 AAEHREAAAVPAAKMPAFSSCFEVVSGAAAP--ASAAAGPPGASCKPPLPPHYTSTAQIT 115
A A P AK + + +GA P S A GP G + P AQ
Sbjct: 835 FAGPPGADGQPGAKGEQGEAGQKGDAGAPGPQGPSGAPGPQGPT--GVTGPKGARGAQGP 892
Query: 116 VRALGADRLLLHGPDPVPGAAGSAAAPRGRCLLLAPAPAAPV-------------PPRRG 162
A G PGAAG P P P P PP R
Sbjct: 893 PGATG-----------FPGAAGRVGPPGSNGNPGPPGPPGPSGKDGPKGARGDSGPPGRA 941
Query: 163 SSAWLLEELLRPDCPEPAGLD--ATREGPDRNFRLSEHRQALAAAKHRGPAATPGSPDPG 220
L P G D + EGP L+ R + RG PG P P
Sbjct: 942 GEPGLQGPAGPPGEKGEPGDDGPSGAEGPPGPQGLAGQRGIVGLPGQRGERGFPGLPGPS 1001
Query: 221 --PGPWGEEHLA-ERGPRGWERGGDRCDAPGGDAARRPDPEAEAPP 263
PG G + +RGP G G P G+ R P A+ PP
Sbjct: 1002 GEPGKQGAPGASGDRGPPG-PVGPPGLTGPAGEPGREGSPGADGPP 1046
Score = 49.3 bits (116), Expect = 8e-06
Identities = 87/281 (30%), Positives = 102/281 (36%), Gaps = 57/281 (20%)
Query: 13 AGAPGPTAAAPAPPAAATPFKVSLQPPGAAGAAPEPETGECQPAAAAEHRE------AAA 66
AGAPG + +P +P + P G G E G PA AA R A
Sbjct: 302 AGAPGVKGESGSPGENGSPGPMG--PRGLPG-----ERGRTGPAGAAGARGNDGQPGPAG 354
Query: 67 VPAAKMPAFSSCFEVVSGAAAPA--SAAAGPPGASCKPPLPPHYTSTAQITVRALGADRL 124
P PA F GA A + A GP GA + P T + A G
Sbjct: 355 PPGPVGPAGGPGFPGAPGAKGEAGPTGARGPEGA--QGPRGEPGTPGSPGPAGASGNP-- 410
Query: 125 LLHGPDPVPGAAGSAAAPRGRCLLLAPAPAAPVPPRRGSSAWLLEELLRPDCPEPAGLDA 184
G D +PGA GSA AP +A AP P P RG P P G
Sbjct: 411 ---GTDGIPGAKGSAGAPG-----IAGAPGFPGP--RGP-------------PGPQGATG 447
Query: 185 TREGPDRNFRLSEHRQALAAAK-HRGPAATPG--SPDPGPGPWGEEHLAERGPRGWERGG 241
GP + +A K +GP PG P PGP GEE +RG RG G
Sbjct: 448 PL-GP----KGQTGEPGIAGFKGEQGPKGEPGPAGPQGAPGPAGEE--GKRGARGEPGGV 500
Query: 242 DRCDAPG--GDAARR--PDPEAEAPPAGSI-EAAPSSAAEP 277
PG G R P + A P G+ E PS A P
Sbjct: 501 GPIGPPGERGAPGNRGFPGQDGLAGPKGAPGERGPSGLAGP 541
Score = 45.4 bits (106), Expect = 1e-04
Identities = 77/268 (28%), Positives = 92/268 (34%), Gaps = 52/268 (19%)
Query: 12 PAGAPGPTAAAPAPPAAATPFKVSLQPPGAAGAAPEP-ETGECQPAAAAEHREAAAVPAA 70
PAG PGP A P PGA GA E TG P A R P +
Sbjct: 352 PAGPPGPVGPAGGPGF-----------PGAPGAKGEAGPTGARGPEGAQGPRGEPGTPGS 400
Query: 71 KMPAFSSCFEVVSGAAAPASAAAGPPGASCKPPLP-PHYTSTAQITVRALGADRLLLHGP 129
PA +S G A +AG PG + P P P Q LG G
Sbjct: 401 PGPAGASGNPGTDGIPG-AKGSAGAPGIAGAPGFPGPRGPPGPQGATGPLGP-----KGQ 454
Query: 130 DPVPGAAG--SAAAPRGRCLLLAPAPAAPVPPRRGSSAWLLEELLRPDCPEPAGLDATRE 187
PG AG P+G P PA P +G+ EE R EP G+
Sbjct: 455 TGEPGIAGFKGEQGPKGE-----PGPAGP----QGAPGPAGEEGKRGARGEPGGVGPIGP 505
Query: 188 GPDRNFRLSEHRQALAAAKHRGPAATPG--SPDPGPGPWGEEHLAERGPRGWERGGDRCD 245
+R A +RG G P PG G LA GP+G R
Sbjct: 506 PGER-----------GAPGNRGFPGQDGLAGPKGAPGERGPSGLA--GPKGANGDPGRPG 552
Query: 246 APGGDAAR----RP---DPEAEAPPAGS 266
PG AR RP P+ + P+G+
Sbjct: 553 EPGLPGARGLTGRPGDAGPQGKVGPSGA 580
Score = 41.2 bits (95), Expect = 0.002
Identities = 71/267 (26%), Positives = 83/267 (31%), Gaps = 43/267 (16%)
Query: 12 PAGAPGP-----TAAAPAPPAAATPFKVSLQPPGAAGAAPEP-ETGEC-QPAAAAEHREA 64
PAGAPGP P P + P + P G G +P + GE +P A E
Sbjct: 214 PAGAPGPQGFQGNPGEPGEPGVSGP----MGPRGPPGPPGKPGDDGEAGKPGKAGERGPP 269
Query: 65 AAVPAAKMPAFSSCFEVVSGAAAP----ASAAAGPPGASCKPPLPPHYTSTAQITVRALG 120
A P V P A AG PG + P S + R L
Sbjct: 270 GPQGARGFPGTPGLPGVKGHRGYPGLDGAKGEAGAPGVKGESGSPGENGSPGPMGPRGLP 329
Query: 121 ADRLLLHGPDPVPGAAGSAAAPRGRCLLLAPA-PAAPVPPRRGSSAWLLEELLRPDCPEP 179
+R GP GA G+ P PA P PV P G P P
Sbjct: 330 GERGRT-GPAGAAGARGNDGQP-------GPAGPPGPVGPAGGPGF--------PGAPGA 373
Query: 180 AGLDATREGPDRNFRLSEHRQALAAAKHRGPAATPGSPDPGPGPWGEEHLAERGPRGWER 239
G GP + R A RG TPGSP P G +G
Sbjct: 374 KG----EAGP------TGARGPEGAQGPRGEPGTPGSPGPAGASGNPGTDGIPGAKGSAG 423
Query: 240 GGDRCDAPGGDAAR-RPDPEAEAPPAG 265
APG R P P+ P G
Sbjct: 424 APGIAGAPGFPGPRGPPGPQGATGPLG 450
Score = 33.5 bits (75), Expect = 0.44
Identities = 70/294 (23%), Positives = 86/294 (29%), Gaps = 52/294 (17%)
Query: 14 GAPGPTA--AAPAPPAAATPFKVSLQPPGAAGAAPEPET-GECQPAAAAEHREAAAVPAA 70
GAPGP+ P PP PPG G + GE R P
Sbjct: 657 GAPGPSGFQGLPGPPG----------PPGEGGKPGDQGVPGEAGAPGLVGPRGERGFPGE 706
Query: 71 KMPAFSSCFEVVSGAAAP--------ASAAAGPPGASCKPPLPPHYTSTAQITVRALGAD 122
+ + + G AS AGPPGA P L + D
Sbjct: 707 RGSPGAQGLQGPRGLPGTPGTDGPKGASGPAGPPGAQGPPGLQGMPGERGAAGIAGPKGD 766
Query: 123 R--LLLHGPDPVPGAAG--SAAAPRGRCLLLAPAPAA----------PVPPRRGSSAWLL 168
R + GP+ PG G P G P PA P P +
Sbjct: 767 RGDVGEKGPEGAPGKDGGRGLTGPIG-----PPGPAGANGEKGEVGPPGPAGSAGARGAP 821
Query: 169 EELLRPDCPEPAGLDATREGPDRNFRLSEHRQALAAAKHRGPAATPG--SPDPGPGPWGE 226
E P PAG GP + A +G A PG P PGP G
Sbjct: 822 GERGETGPPGPAGF----AGPPGADGQPGAKGEQGEAGQKGDAGAPGPQGPSGAPGPQGP 877
Query: 227 EHL-AERGPRGWERGGDRCDAPG-----GDAARRPDPEAEAPPAGSIEAAPSSA 274
+ +G RG + PG G +P PP S + P A
Sbjct: 878 TGVTGPKGARGAQGPPGATGFPGAAGRVGPPGSNGNPGPPGPPGPSGKDGPKGA 931
Score = 32.7 bits (73), Expect = 0.75
Identities = 77/274 (28%), Positives = 91/274 (33%), Gaps = 70/274 (25%)
Query: 12 PAGAPG----PTAAAPAPPAAATPFKVSLQPPGAAGA--APEP--ETGECQPAAAAEHRE 63
PAG PG P A P A K GA GA AP P G P R
Sbjct: 1030 PAGEPGREGSPGADGPPGRDGAAGVKGDRGETGAVGAPGAPGPPGSPGPAGPTGKQGDRG 1089
Query: 64 AAAVPAAKMPAFSSCFEVVSGAAAPAS--AAAGPPGASCKPPLPPHYTSTAQITVRALGA 121
A P+ + + G P AG PG + L H T ++ L
Sbjct: 1090 EAGAQGPMGPSGPAGARGIQGPQGPRGDKGEAGEPG---ERGLKGHRGFTG---LQGLPG 1143
Query: 122 DRLLLHGPDPVPGAAGSA--AAPRGRCLLLAPAPAAPVPPRRGSSAWLLEELLRPDCPEP 179
GP GA+G A + PRG P PV P A + + P P P
Sbjct: 1144 PP----GPSGDQGASGPAGPSGPRG--------PPGPVGPSGKDGANGIPGPIGP--PGP 1189
Query: 180 AGLDATREGPDRNFRLSEHRQALAAAKHRGPAATPGSPDPGPGPWGE-------EHLAER 232
G R G GPA PG+P P PGP G A
Sbjct: 1190 RG----RSG------------------ETGPAGPPGNPGP-PGPPGPPGPGIDMSAFAGL 1226
Query: 233 GPRGWERGGD-----RCDAPGGDAARRPDPEAEA 261
GPR E+G D R D G R+ D E +A
Sbjct: 1227 GPR--EKGPDPLQYMRADQAAG-GLRQHDAEVDA 1257
>gi|111118974 collagen, type II, alpha 1 isoform 2 precursor [Homo
sapiens]
Length = 1418
Score = 53.5 bits (127), Expect = 4e-07
Identities = 81/286 (28%), Positives = 94/286 (32%), Gaps = 48/286 (16%)
Query: 12 PAGAPGPTAA-------APAPPAAATPFKVSLQPPGAAGAA-------PEPETGECQPAA 57
P GAPG P PA A K + PPG AG+A ETG PA
Sbjct: 706 PEGAPGKDGGRGLTGPIGPPGPAGANGEKGEVGPPGPAGSAGARGAPGERGETGPPGPAG 765
Query: 58 AAEHREAAAVPAAKMPAFSSCFEVVSGAAAP--ASAAAGPPGASCKPPLPPHYTSTAQIT 115
A A P AK + + +GA P S A GP G + P AQ
Sbjct: 766 FAGPPGADGQPGAKGEQGEAGQKGDAGAPGPQGPSGAPGPQGPT--GVTGPKGARGAQGP 823
Query: 116 VRALGADRLLLHGPDPVPGAAGSAAAPRGRCLLLAPAPAAPV-------------PPRRG 162
A G PGAAG P P P P PP R
Sbjct: 824 PGATG-----------FPGAAGRVGPPGSNGNPGPPGPPGPSGKDGPKGARGDSGPPGRA 872
Query: 163 SSAWLLEELLRPDCPEPAGLD--ATREGPDRNFRLSEHRQALAAAKHRGPAATPGSPDPG 220
L P G D + EGP L+ R + RG PG P P
Sbjct: 873 GEPGLQGPAGPPGEKGEPGDDGPSGAEGPPGPQGLAGQRGIVGLPGQRGERGFPGLPGPS 932
Query: 221 --PGPWGEEHLA-ERGPRGWERGGDRCDAPGGDAARRPDPEAEAPP 263
PG G + +RGP G G P G+ R P A+ PP
Sbjct: 933 GEPGKQGAPGASGDRGPPG-PVGPPGLTGPAGEPGREGSPGADGPP 977
Score = 49.3 bits (116), Expect = 8e-06
Identities = 87/281 (30%), Positives = 102/281 (36%), Gaps = 57/281 (20%)
Query: 13 AGAPGPTAAAPAPPAAATPFKVSLQPPGAAGAAPEPETGECQPAAAAEHRE------AAA 66
AGAPG + +P +P + P G G E G PA AA R A
Sbjct: 233 AGAPGVKGESGSPGENGSPGPMG--PRGLPG-----ERGRTGPAGAAGARGNDGQPGPAG 285
Query: 67 VPAAKMPAFSSCFEVVSGAAAPA--SAAAGPPGASCKPPLPPHYTSTAQITVRALGADRL 124
P PA F GA A + A GP GA + P T + A G
Sbjct: 286 PPGPVGPAGGPGFPGAPGAKGEAGPTGARGPEGA--QGPRGEPGTPGSPGPAGASGNP-- 341
Query: 125 LLHGPDPVPGAAGSAAAPRGRCLLLAPAPAAPVPPRRGSSAWLLEELLRPDCPEPAGLDA 184
G D +PGA GSA AP +A AP P P RG P P G
Sbjct: 342 ---GTDGIPGAKGSAGAPG-----IAGAPGFPGP--RGP-------------PGPQGATG 378
Query: 185 TREGPDRNFRLSEHRQALAAAK-HRGPAATPG--SPDPGPGPWGEEHLAERGPRGWERGG 241
GP + +A K +GP PG P PGP GEE +RG RG G
Sbjct: 379 PL-GP----KGQTGEPGIAGFKGEQGPKGEPGPAGPQGAPGPAGEE--GKRGARGEPGGV 431
Query: 242 DRCDAPG--GDAARR--PDPEAEAPPAGSI-EAAPSSAAEP 277
PG G R P + A P G+ E PS A P
Sbjct: 432 GPIGPPGERGAPGNRGFPGQDGLAGPKGAPGERGPSGLAGP 472
Score = 45.4 bits (106), Expect = 1e-04
Identities = 77/268 (28%), Positives = 92/268 (34%), Gaps = 52/268 (19%)
Query: 12 PAGAPGPTAAAPAPPAAATPFKVSLQPPGAAGAAPEP-ETGECQPAAAAEHREAAAVPAA 70
PAG PGP A P PGA GA E TG P A R P +
Sbjct: 283 PAGPPGPVGPAGGPGF-----------PGAPGAKGEAGPTGARGPEGAQGPRGEPGTPGS 331
Query: 71 KMPAFSSCFEVVSGAAAPASAAAGPPGASCKPPLP-PHYTSTAQITVRALGADRLLLHGP 129
PA +S G A +AG PG + P P P Q LG G
Sbjct: 332 PGPAGASGNPGTDGIPG-AKGSAGAPGIAGAPGFPGPRGPPGPQGATGPLGP-----KGQ 385
Query: 130 DPVPGAAG--SAAAPRGRCLLLAPAPAAPVPPRRGSSAWLLEELLRPDCPEPAGLDATRE 187
PG AG P+G P PA P +G+ EE R EP G+
Sbjct: 386 TGEPGIAGFKGEQGPKGE-----PGPAGP----QGAPGPAGEEGKRGARGEPGGVGPIGP 436
Query: 188 GPDRNFRLSEHRQALAAAKHRGPAATPG--SPDPGPGPWGEEHLAERGPRGWERGGDRCD 245
+R A +RG G P PG G LA GP+G R
Sbjct: 437 PGER-----------GAPGNRGFPGQDGLAGPKGAPGERGPSGLA--GPKGANGDPGRPG 483
Query: 246 APGGDAAR----RP---DPEAEAPPAGS 266
PG AR RP P+ + P+G+
Sbjct: 484 EPGLPGARGLTGRPGDAGPQGKVGPSGA 511
Score = 41.2 bits (95), Expect = 0.002
Identities = 71/267 (26%), Positives = 83/267 (31%), Gaps = 43/267 (16%)
Query: 12 PAGAPGP-----TAAAPAPPAAATPFKVSLQPPGAAGAAPEP-ETGEC-QPAAAAEHREA 64
PAGAPGP P P + P + P G G +P + GE +P A E
Sbjct: 145 PAGAPGPQGFQGNPGEPGEPGVSGP----MGPRGPPGPPGKPGDDGEAGKPGKAGERGPP 200
Query: 65 AAVPAAKMPAFSSCFEVVSGAAAP----ASAAAGPPGASCKPPLPPHYTSTAQITVRALG 120
A P V P A AG PG + P S + R L
Sbjct: 201 GPQGARGFPGTPGLPGVKGHRGYPGLDGAKGEAGAPGVKGESGSPGENGSPGPMGPRGLP 260
Query: 121 ADRLLLHGPDPVPGAAGSAAAPRGRCLLLAPA-PAAPVPPRRGSSAWLLEELLRPDCPEP 179
+R GP GA G+ P PA P PV P G P P
Sbjct: 261 GERGRT-GPAGAAGARGNDGQP-------GPAGPPGPVGPAGGPGF--------PGAPGA 304
Query: 180 AGLDATREGPDRNFRLSEHRQALAAAKHRGPAATPGSPDPGPGPWGEEHLAERGPRGWER 239
G GP + R A RG TPGSP P G +G
Sbjct: 305 KG----EAGP------TGARGPEGAQGPRGEPGTPGSPGPAGASGNPGTDGIPGAKGSAG 354
Query: 240 GGDRCDAPGGDAAR-RPDPEAEAPPAG 265
APG R P P+ P G
Sbjct: 355 APGIAGAPGFPGPRGPPGPQGATGPLG 381
Score = 33.5 bits (75), Expect = 0.44
Identities = 70/294 (23%), Positives = 86/294 (29%), Gaps = 52/294 (17%)
Query: 14 GAPGPTA--AAPAPPAAATPFKVSLQPPGAAGAAPEPET-GECQPAAAAEHREAAAVPAA 70
GAPGP+ P PP PPG G + GE R P
Sbjct: 588 GAPGPSGFQGLPGPPG----------PPGEGGKPGDQGVPGEAGAPGLVGPRGERGFPGE 637
Query: 71 KMPAFSSCFEVVSGAAAP--------ASAAAGPPGASCKPPLPPHYTSTAQITVRALGAD 122
+ + + G AS AGPPGA P L + D
Sbjct: 638 RGSPGAQGLQGPRGLPGTPGTDGPKGASGPAGPPGAQGPPGLQGMPGERGAAGIAGPKGD 697
Query: 123 R--LLLHGPDPVPGAAG--SAAAPRGRCLLLAPAPAA----------PVPPRRGSSAWLL 168
R + GP+ PG G P G P PA P P +
Sbjct: 698 RGDVGEKGPEGAPGKDGGRGLTGPIG-----PPGPAGANGEKGEVGPPGPAGSAGARGAP 752
Query: 169 EELLRPDCPEPAGLDATREGPDRNFRLSEHRQALAAAKHRGPAATPG--SPDPGPGPWGE 226
E P PAG GP + A +G A PG P PGP G
Sbjct: 753 GERGETGPPGPAGF----AGPPGADGQPGAKGEQGEAGQKGDAGAPGPQGPSGAPGPQGP 808
Query: 227 EHL-AERGPRGWERGGDRCDAPG-----GDAARRPDPEAEAPPAGSIEAAPSSA 274
+ +G RG + PG G +P PP S + P A
Sbjct: 809 TGVTGPKGARGAQGPPGATGFPGAAGRVGPPGSNGNPGPPGPPGPSGKDGPKGA 862
Score = 32.7 bits (73), Expect = 0.75
Identities = 77/274 (28%), Positives = 91/274 (33%), Gaps = 70/274 (25%)
Query: 12 PAGAPG----PTAAAPAPPAAATPFKVSLQPPGAAGA--APEP--ETGECQPAAAAEHRE 63
PAG PG P A P A K GA GA AP P G P R
Sbjct: 961 PAGEPGREGSPGADGPPGRDGAAGVKGDRGETGAVGAPGAPGPPGSPGPAGPTGKQGDRG 1020
Query: 64 AAAVPAAKMPAFSSCFEVVSGAAAPAS--AAAGPPGASCKPPLPPHYTSTAQITVRALGA 121
A P+ + + G P AG PG + L H T ++ L
Sbjct: 1021 EAGAQGPMGPSGPAGARGIQGPQGPRGDKGEAGEPG---ERGLKGHRGFTG---LQGLPG 1074
Query: 122 DRLLLHGPDPVPGAAGSA--AAPRGRCLLLAPAPAAPVPPRRGSSAWLLEELLRPDCPEP 179
GP GA+G A + PRG P PV P A + + P P P
Sbjct: 1075 PP----GPSGDQGASGPAGPSGPRG--------PPGPVGPSGKDGANGIPGPIGP--PGP 1120
Query: 180 AGLDATREGPDRNFRLSEHRQALAAAKHRGPAATPGSPDPGPGPWGE-------EHLAER 232
G R G GPA PG+P P PGP G A
Sbjct: 1121 RG----RSG------------------ETGPAGPPGNPGP-PGPPGPPGPGIDMSAFAGL 1157
Query: 233 GPRGWERGGD-----RCDAPGGDAARRPDPEAEA 261
GPR E+G D R D G R+ D E +A
Sbjct: 1158 GPR--EKGPDPLQYMRADQAAG-GLRQHDAEVDA 1188
>gi|110556644 zinc finger protein, multitype 1 [Homo sapiens]
Length = 1006
Score = 53.1 bits (126), Expect = 5e-07
Identities = 82/278 (29%), Positives = 95/278 (34%), Gaps = 59/278 (21%)
Query: 12 PAGAPGPTAAAPAPPAAA---TPFKVSLQPPGAAGAAPEPETGECQPAAAAEHREAAAVP 68
P G PGP AA PAP AA T + L AAGA P P G A A
Sbjct: 720 PPGPPGP-AAPPAPSPAAPVRTRRRRKLYELHAAGAPPPPPPG-----------HAPAPE 767
Query: 69 AAKMPAFSSCFEVVSGAAAPASAAAGPPGASCKPPLP-PHYTSTAQITVRALGADRLLLH 127
+ + + S ++ A +P AA GP S KP P P + A A R+ H
Sbjct: 768 SPRPGSGSGSGPGLAPARSPGPAADGPIDLSKKPRRPLPGAPAPALADYHECTACRVSFH 827
Query: 128 GPDPVPGAAGSAAAPRGRCLLLAPAPAAPVPPRRGSSAWLLEELLRPDCPEPAGLDATRE 187
+ A + C PAAP P G L P CP
Sbjct: 828 SLE------AYLAHKKYSC------PAAPPPGALG-----LPAAACPYCPP--------N 862
Query: 188 GPDRNFRLSEHRQA---LAAAKHRGP---AATPG--SPDPGPGPWGEEHLAERGPRGWER 239
GP R L R A L A GP A TP P P P P RGPR
Sbjct: 863 GPVRGDLLEHFRLAHGLLLGAPLAGPGVEARTPADRGPSPAPAPAASPQPGSRGPRDGL- 921
Query: 240 GGDRCDAPGGDAARRPDPEAEAPPAGSIEAAPSSAAEP 277
G + P P PA + EA P A P
Sbjct: 922 ---------GPEPQEPPPGPPPSPAAAPEAVPPPPAPP 950
Score = 42.4 bits (98), Expect = 0.001
Identities = 64/226 (28%), Positives = 75/226 (33%), Gaps = 36/226 (15%)
Query: 15 APGPTAAAPAPPAAATPFKVSLQPPGAAGAAPEPETGECQPAAAAEHREAAAVPAAKMPA 74
AP AA P A P + PPG A P+ P A E AA P
Sbjct: 605 APEDAPAARRPKAPPGPARA---PPGQP-AEPDAPRSSPGPGAREEGAGGAATPE----- 655
Query: 75 FSSCFEVVSGAAAPASAAAGPPGASCKPPLP-PHYTSTAQITVRALGADRLLLHGP---- 129
GA S + PG+S P T +R + +H
Sbjct: 656 --------DGAGGRGSEGSQSPGSSVDDAEDDPSRTLCEACNIRFSRHETYTVHKRYYCA 707
Query: 130 ---DPVPGAAGSAAAPRGRCLLLAPAPAAPVPPRRGSSAWLLEELLRPDCPEPAGLDATR 186
DP P + P G AP+PAAPV RR + L P P P G
Sbjct: 708 SRHDPPPRRPAAPPGPPGPAAPPAPSPAAPVRTRRRRKLYELHAAGAPP-PPPPGHAPAP 766
Query: 187 EGPDRNFRLSEHRQALAAAKHRGPAA--------TPGSPDPG-PGP 223
E P R S LA A+ GPAA P P PG P P
Sbjct: 767 ESP-RPGSGSGSGPGLAPARSPGPAADGPIDLSKKPRRPLPGAPAP 811
Score = 29.3 bits (64), Expect = 8.3
Identities = 27/85 (31%), Positives = 32/85 (37%), Gaps = 11/85 (12%)
Query: 13 AGAPGPTAAAPAPPAAATPFKVSLQPPGAAGAAP-EPETG-ECQPAAAAEHREAAAVPAA 70
A P +PAP AA+P S P G P EP G PAAA E A P
Sbjct: 892 ARTPADRGPSPAPAPAASPQPGSRGPRDGLGPEPQEPPPGPPPSPAAAPE----AVPPPP 947
Query: 71 KMPAFSSCFEVVSGAAAPASAAAGP 95
P++S G P+ P
Sbjct: 948 APPSYSD-----KGVQTPSKGTPAP 967
>gi|169211815 PREDICTED: keratin associated protein 4.6 [Homo
sapiens]
Length = 288
Score = 52.4 bits (124), Expect = 9e-07
Identities = 48/147 (32%), Positives = 62/147 (42%), Gaps = 23/147 (15%)
Query: 12 PAGAPGPTAAAPAPPAAATPFKVSLQPPGAAGAAPEPETGECQPAAAAEHREAAAVPAAK 71
PA P AA PPAA PP AA AA P + A+ AAVPAA
Sbjct: 138 PAAVPAAVPAAVRPPAAG--------PPAAALAAVYPAAADPSAASLCAASPLAAVPAAA 189
Query: 72 MPAFSSCFEVVSGAAAPASAAAGPPGASCKPPLPPHYTSTAQITVRALGADRLLLHGPDP 131
PA + V GAA P++A+ A+ +P P S A A+
Sbjct: 190 SPAAVAPAAVCPGAAGPSAASL---CAASQPAAVPAAASPAAAAPLAVNP---------- 236
Query: 132 VPGAAGSAAAPRGRCL-LLAPAPAAPV 157
AA +AAAP C+ +A +PA P+
Sbjct: 237 -AAAARAAAAPAAACVQSVAESPATPL 262
Score = 41.2 bits (95), Expect = 0.002
Identities = 47/139 (33%), Positives = 58/139 (41%), Gaps = 30/139 (21%)
Query: 5 SSVCTHYPAGAPGPTAAAPAP--PAAATPFKVSLQPPGAAGAAPEPETGECQPAAAAEHR 62
+S+C P A P AA+PA PAA PGAAG + QP
Sbjct: 174 ASLCAASPLAAV-PAAASPAAVAPAAVC--------PGAAGPSAASLCAASQP------- 217
Query: 63 EAAAVPAAKMPAFSSCFEVVSGAAAPASAAAGPPGASCKPPLPPHYTSTAQITVRALGAD 122
AAVPAA PA ++ V AAA A+AA P A+C S A+ L
Sbjct: 218 --AAVPAAASPAAAAPLAVNPAAAARAAAA---PAAAC-------VQSVAESPATPLAIA 265
Query: 123 RLLLHGPDPVPGAAGSAAA 141
+ + P PVP A AA
Sbjct: 266 QPVSFPPAPVPCAVPPLAA 284
Score = 38.9 bits (89), Expect = 0.010
Identities = 60/204 (29%), Positives = 78/204 (38%), Gaps = 25/204 (12%)
Query: 18 PTAAAPAPPAAATPFKVSLQPPGAAGAAPEPETGECQPAAAAEHREAAAVPAAKMPAFSS 77
P +A P+A T + P AA AA P PAAA AA PAA P+ +S
Sbjct: 79 PWSAPVVVPSALT--RAVAWRPAAAPAAVRPPAAG-PPAAA----PAAVCPAAADPSAAS 131
Query: 78 CFEVVSGAAAPASAAAGPPGASCKPPLPPHYTSTAQITVRALGADRLLLHGPDPVPGAAG 137
+ A+ PA+ A P A P P + A + A L P+ A
Sbjct: 132 ----LCAASPPAAVPAAVPAAVRPPAAGPPAAALAAVYPAAADPSAASLCAASPL-AAVP 186
Query: 138 SAAAPRGRCLLLAPAPAAPVPPRRGSSAWLL----EELLRPDCPEPAGLDATREGPDRNF 193
+AA+P A APAA P G SA L + P PA P
Sbjct: 187 AAASP------AAVAPAAVCPGAAGPSAASLCAASQPAAVPAAASPAAAAPLAVNPAAAA 240
Query: 194 RLSEHRQALAAAKHRGPAATPGSP 217
R + A AAA + A +P +P
Sbjct: 241 RAA---AAPAAACVQSVAESPATP 261
Score = 30.0 bits (66), Expect = 4.9
Identities = 50/166 (30%), Positives = 58/166 (34%), Gaps = 36/166 (21%)
Query: 58 AAEHREAAAVPAAKMPAFSSCFEVVSGAAAPAS---AAAGPPGASCKPPLPPHYTSTAQI 114
A R AAA A + PA AAAPA+ AAA P AS PP A +
Sbjct: 93 AVAWRPAAAPAAVRPPAAG------PPAAAPAAVCPAAADPSAASLCAASPP-----AAV 141
Query: 115 TVRALGADRLLLHGPDPVP-GAAGSAAAPRGRCLLLAPAPAAPVPPRRGSSAWLLEELLR 173
A R GP A AAA L A +P A VP +A +
Sbjct: 142 PAAVPAAVRPPAAGPPAAALAAVYPAAADPSAASLCAASPLAAVPAAASPAAVAPAAV-- 199
Query: 174 PDCPEPAGLDATREGPDRNFRLSEHRQALAAAKHRGPAATPGSPDP 219
CP AG A +L AA PAA P + P
Sbjct: 200 --CPGAAGPSAA---------------SLCAASQ--PAAVPAAASP 226
>gi|222418647 mucin 7, secreted precursor [Homo sapiens]
Length = 377
Score = 51.6 bits (122), Expect = 2e-06
Identities = 51/165 (30%), Positives = 63/165 (38%), Gaps = 24/165 (14%)
Query: 5 SSVCTHYPAGAPGP--TAAAPAPPAAATPFKVSLQ-PPGAAGAAPEPE-TGECQPAAAAE 60
SSV T P +P P T AAP P+A TP S PP A P P T + P+++A
Sbjct: 149 SSVATLAPVNSPAPQDTTAAPPTPSATTPAPPSSSAPPETTAAPPTPSATTQAPPSSSAP 208
Query: 61 HREAAA--VPAAKMPAFSSCFEVVSGAAAPASAAAGPPGASCKPPLP-----PHYTSTAQ 113
AA P A PA S ++AP A PP S P P P T+
Sbjct: 209 PETTAAPPTPPATTPAPPS-------SSAPPETTAAPPTPSATTPAPLSSSAPPETTAVP 261
Query: 114 ITVRALGADRLLLHGPDPVPGAAGSAAAPRGRCLLLAPAPAAPVP 158
T A D P + AAP P++P P
Sbjct: 262 PTPSATTLD------PSSASAPPETTAAPPTPSATTPAPPSSPAP 300
Score = 50.8 bits (120), Expect = 3e-06
Identities = 34/111 (30%), Positives = 45/111 (40%), Gaps = 11/111 (9%)
Query: 5 SSVCTHYPAGAPGPTAAAPAPPAAATPFKVSLQPPGAAGAAPEPETGECQPAAAAEHREA 64
SS A P P A PAPP+++ P + + PP + P P + P E
Sbjct: 205 SSAPPETTAAPPTPPATTPAPPSSSAPPETTAAPPTPSATTPAPLSSSAPP-------ET 257
Query: 65 AAVPAAKMPAFSSCFEVVSGAAAPASAAAGPPGASCKPPLPPHYTSTAQIT 115
AVP P S+ S A+AP A PP S P PP + + T
Sbjct: 258 TAVP----PTPSATTLDPSSASAPPETTAAPPTPSATTPAPPSSPAPQETT 304
Score = 33.5 bits (75), Expect = 0.44
Identities = 20/56 (35%), Positives = 23/56 (41%)
Query: 13 AGAPGPTAAAPAPPAAATPFKVSLQPPGAAGAAPEPETGECQPAAAAEHREAAAVP 68
A AP T AAP P+A TP S P AAP A + E +A P
Sbjct: 274 ASAPPETTAAPPTPSATTPAPPSSPAPQETTAAPITTPNSSPTTLAPDTSETSAAP 329
Score = 31.6 bits (70), Expect = 1.7
Identities = 28/105 (26%), Positives = 40/105 (38%), Gaps = 18/105 (17%)
Query: 13 AGAPGPTAAAPAPPAAAT--PFKVSLQPPGAAGAAPEPETGECQPAAAAEHREAAAVPAA 70
+ AP T A P P+A T P S PP A P P P ++ +E A P
Sbjct: 251 SSAPPETTAVPPTPSATTLDPSSASA-PPETTAAPPTPSATTPAPPSSPAPQETTAAP-- 307
Query: 71 KMPAFSSCFEVVSGAAAPASAAAGPPGASCKPPLPPHYTSTAQIT 115
+ + ++P + A P S P H T+T+ T
Sbjct: 308 ----------ITTPNSSPTTLA---PDTSETSAAPTHQTTTSVTT 339
Score = 31.2 bits (69), Expect = 2.2
Identities = 41/153 (26%), Positives = 48/153 (31%), Gaps = 20/153 (13%)
Query: 133 PGAAGSAAAPRGRCLLLAPAPAAPVPPRRGSSAWLLEELLRPDCPEPAGLDATREGPDRN 192
P + AAP P+ P PP SS+ E P P AT + P +
Sbjct: 160 PAPQDTTAAPP------TPSATTPAPP---SSSAPPETTAAPPTPS-----ATTQAPPSS 205
Query: 193 FRLSEHRQALAAAKHRGPAATPGSPDPGPGPWGEEHLAERGPRGWERGGDRCDAPGGDAA 252
E AA PA TP P P E A P AP A
Sbjct: 206 SAPPE----TTAAPPTPPATTPAPPSSSAPP--ETTAAPPTPSATTPAPLSSSAPPETTA 259
Query: 253 RRPDPEAEAPPAGSIEAAPSSAAEPVIVSRSDP 285
P P A S A P + A P S + P
Sbjct: 260 VPPTPSATTLDPSSASAPPETTAAPPTPSATTP 292
>gi|222418649 mucin 7, secreted precursor [Homo sapiens]
Length = 377
Score = 51.6 bits (122), Expect = 2e-06
Identities = 51/165 (30%), Positives = 63/165 (38%), Gaps = 24/165 (14%)
Query: 5 SSVCTHYPAGAPGP--TAAAPAPPAAATPFKVSLQ-PPGAAGAAPEPE-TGECQPAAAAE 60
SSV T P +P P T AAP P+A TP S PP A P P T + P+++A
Sbjct: 149 SSVATLAPVNSPAPQDTTAAPPTPSATTPAPPSSSAPPETTAAPPTPSATTQAPPSSSAP 208
Query: 61 HREAAA--VPAAKMPAFSSCFEVVSGAAAPASAAAGPPGASCKPPLP-----PHYTSTAQ 113
AA P A PA S ++AP A PP S P P P T+
Sbjct: 209 PETTAAPPTPPATTPAPPS-------SSAPPETTAAPPTPSATTPAPLSSSAPPETTAVP 261
Query: 114 ITVRALGADRLLLHGPDPVPGAAGSAAAPRGRCLLLAPAPAAPVP 158
T A D P + AAP P++P P
Sbjct: 262 PTPSATTLD------PSSASAPPETTAAPPTPSATTPAPPSSPAP 300
Score = 50.8 bits (120), Expect = 3e-06
Identities = 34/111 (30%), Positives = 45/111 (40%), Gaps = 11/111 (9%)
Query: 5 SSVCTHYPAGAPGPTAAAPAPPAAATPFKVSLQPPGAAGAAPEPETGECQPAAAAEHREA 64
SS A P P A PAPP+++ P + + PP + P P + P E
Sbjct: 205 SSAPPETTAAPPTPPATTPAPPSSSAPPETTAAPPTPSATTPAPLSSSAPP-------ET 257
Query: 65 AAVPAAKMPAFSSCFEVVSGAAAPASAAAGPPGASCKPPLPPHYTSTAQIT 115
AVP P S+ S A+AP A PP S P PP + + T
Sbjct: 258 TAVP----PTPSATTLDPSSASAPPETTAAPPTPSATTPAPPSSPAPQETT 304
Score = 33.5 bits (75), Expect = 0.44
Identities = 20/56 (35%), Positives = 23/56 (41%)
Query: 13 AGAPGPTAAAPAPPAAATPFKVSLQPPGAAGAAPEPETGECQPAAAAEHREAAAVP 68
A AP T AAP P+A TP S P AAP A + E +A P
Sbjct: 274 ASAPPETTAAPPTPSATTPAPPSSPAPQETTAAPITTPNSSPTTLAPDTSETSAAP 329
Score = 31.6 bits (70), Expect = 1.7
Identities = 28/105 (26%), Positives = 40/105 (38%), Gaps = 18/105 (17%)
Query: 13 AGAPGPTAAAPAPPAAAT--PFKVSLQPPGAAGAAPEPETGECQPAAAAEHREAAAVPAA 70
+ AP T A P P+A T P S PP A P P P ++ +E A P
Sbjct: 251 SSAPPETTAVPPTPSATTLDPSSASA-PPETTAAPPTPSATTPAPPSSPAPQETTAAP-- 307
Query: 71 KMPAFSSCFEVVSGAAAPASAAAGPPGASCKPPLPPHYTSTAQIT 115
+ + ++P + A P S P H T+T+ T
Sbjct: 308 ----------ITTPNSSPTTLA---PDTSETSAAPTHQTTTSVTT 339
Score = 31.2 bits (69), Expect = 2.2
Identities = 41/153 (26%), Positives = 48/153 (31%), Gaps = 20/153 (13%)
Query: 133 PGAAGSAAAPRGRCLLLAPAPAAPVPPRRGSSAWLLEELLRPDCPEPAGLDATREGPDRN 192
P + AAP P+ P PP SS+ E P P AT + P +
Sbjct: 160 PAPQDTTAAPP------TPSATTPAPP---SSSAPPETTAAPPTPS-----ATTQAPPSS 205
Query: 193 FRLSEHRQALAAAKHRGPAATPGSPDPGPGPWGEEHLAERGPRGWERGGDRCDAPGGDAA 252
E AA PA TP P P E A P AP A
Sbjct: 206 SAPPE----TTAAPPTPPATTPAPPSSSAPP--ETTAAPPTPSATTPAPLSSSAPPETTA 259
Query: 253 RRPDPEAEAPPAGSIEAAPSSAAEPVIVSRSDP 285
P P A S A P + A P S + P
Sbjct: 260 VPPTPSATTLDPSSASAPPETTAAPPTPSATTP 292
>gi|222418645 mucin 7, secreted precursor [Homo sapiens]
Length = 377
Score = 51.6 bits (122), Expect = 2e-06
Identities = 51/165 (30%), Positives = 63/165 (38%), Gaps = 24/165 (14%)
Query: 5 SSVCTHYPAGAPGP--TAAAPAPPAAATPFKVSLQ-PPGAAGAAPEPE-TGECQPAAAAE 60
SSV T P +P P T AAP P+A TP S PP A P P T + P+++A
Sbjct: 149 SSVATLAPVNSPAPQDTTAAPPTPSATTPAPPSSSAPPETTAAPPTPSATTQAPPSSSAP 208
Query: 61 HREAAA--VPAAKMPAFSSCFEVVSGAAAPASAAAGPPGASCKPPLP-----PHYTSTAQ 113
AA P A PA S ++AP A PP S P P P T+
Sbjct: 209 PETTAAPPTPPATTPAPPS-------SSAPPETTAAPPTPSATTPAPLSSSAPPETTAVP 261
Query: 114 ITVRALGADRLLLHGPDPVPGAAGSAAAPRGRCLLLAPAPAAPVP 158
T A D P + AAP P++P P
Sbjct: 262 PTPSATTLD------PSSASAPPETTAAPPTPSATTPAPPSSPAP 300
Score = 50.8 bits (120), Expect = 3e-06
Identities = 34/111 (30%), Positives = 45/111 (40%), Gaps = 11/111 (9%)
Query: 5 SSVCTHYPAGAPGPTAAAPAPPAAATPFKVSLQPPGAAGAAPEPETGECQPAAAAEHREA 64
SS A P P A PAPP+++ P + + PP + P P + P E
Sbjct: 205 SSAPPETTAAPPTPPATTPAPPSSSAPPETTAAPPTPSATTPAPLSSSAPP-------ET 257
Query: 65 AAVPAAKMPAFSSCFEVVSGAAAPASAAAGPPGASCKPPLPPHYTSTAQIT 115
AVP P S+ S A+AP A PP S P PP + + T
Sbjct: 258 TAVP----PTPSATTLDPSSASAPPETTAAPPTPSATTPAPPSSPAPQETT 304
Score = 33.5 bits (75), Expect = 0.44
Identities = 20/56 (35%), Positives = 23/56 (41%)
Query: 13 AGAPGPTAAAPAPPAAATPFKVSLQPPGAAGAAPEPETGECQPAAAAEHREAAAVP 68
A AP T AAP P+A TP S P AAP A + E +A P
Sbjct: 274 ASAPPETTAAPPTPSATTPAPPSSPAPQETTAAPITTPNSSPTTLAPDTSETSAAP 329
Score = 31.6 bits (70), Expect = 1.7
Identities = 28/105 (26%), Positives = 40/105 (38%), Gaps = 18/105 (17%)
Query: 13 AGAPGPTAAAPAPPAAAT--PFKVSLQPPGAAGAAPEPETGECQPAAAAEHREAAAVPAA 70
+ AP T A P P+A T P S PP A P P P ++ +E A P
Sbjct: 251 SSAPPETTAVPPTPSATTLDPSSASA-PPETTAAPPTPSATTPAPPSSPAPQETTAAP-- 307
Query: 71 KMPAFSSCFEVVSGAAAPASAAAGPPGASCKPPLPPHYTSTAQIT 115
+ + ++P + A P S P H T+T+ T
Sbjct: 308 ----------ITTPNSSPTTLA---PDTSETSAAPTHQTTTSVTT 339
Score = 31.2 bits (69), Expect = 2.2
Identities = 41/153 (26%), Positives = 48/153 (31%), Gaps = 20/153 (13%)
Query: 133 PGAAGSAAAPRGRCLLLAPAPAAPVPPRRGSSAWLLEELLRPDCPEPAGLDATREGPDRN 192
P + AAP P+ P PP SS+ E P P AT + P +
Sbjct: 160 PAPQDTTAAPP------TPSATTPAPP---SSSAPPETTAAPPTPS-----ATTQAPPSS 205
Query: 193 FRLSEHRQALAAAKHRGPAATPGSPDPGPGPWGEEHLAERGPRGWERGGDRCDAPGGDAA 252
E AA PA TP P P E A P AP A
Sbjct: 206 SAPPE----TTAAPPTPPATTPAPPSSSAPP--ETTAAPPTPSATTPAPLSSSAPPETTA 259
Query: 253 RRPDPEAEAPPAGSIEAAPSSAAEPVIVSRSDP 285
P P A S A P + A P S + P
Sbjct: 260 VPPTPSATTLDPSSASAPPETTAAPPTPSATTP 292
>gi|115298682 HBxAg transactivated protein 2 [Homo sapiens]
Length = 2817
Score = 51.6 bits (122), Expect = 2e-06
Identities = 53/189 (28%), Positives = 75/189 (39%), Gaps = 12/189 (6%)
Query: 2 QLYSSVCTHYPAGAP-GPTAAAPAPPAAATPFKVSLQPPGAAGAAPEP---------ETG 51
Q SS A AP P+ +A P + + P +L P A+ +AP P T
Sbjct: 1739 QAQSSASVPPLASAPLPPSTSASVPASTSAPLPATLTPVPASTSAPVPASTLAPVLASTS 1798
Query: 52 ECQPAAAAEHREAAAVPAAKMPAFSSCFEVVSGAAAPASAAAGPPGASCKPPLPPHYTST 111
PA+ A+A +A +PA +S + S ++APASA A P P T
Sbjct: 1799 APVPASPLAPVSASASVSASVPASTSAAAITS-SSAPASAPAPTP-ILASVSTPASVTIL 1856
Query: 112 AQITVRALGADRLLLHGPDPVPGAAGSAAAPRGRCLLLAPAPAAPVPPRRGSSAWLLEEL 171
A ++ L + P P P A+ AA + A AP A VP S++
Sbjct: 1857 ASASIPILASALASTSAPTPAPAASSPAAPVITAPTIPASAPTASVPLAPASASAPAPAP 1916
Query: 172 LRPDCPEPA 180
P PA
Sbjct: 1917 TPVSAPNPA 1925
Score = 37.0 bits (84), Expect = 0.040
Identities = 30/97 (30%), Positives = 41/97 (42%), Gaps = 5/97 (5%)
Query: 12 PAGAPGPTA--AAPAPPAAATPFKVSLQPPGAAGAAPEPETGECQPAAAAEHREAAAVPA 69
PA AP PT A+ + PA+ T + P A+ A T PA AA A + A
Sbjct: 1834 PASAPAPTPILASVSTPASVTILASASIPILASALA---STSAPTPAPAASSPAAPVITA 1890
Query: 70 AKMPAFSSCFEVVSGAAAPASAAAGPPGASCKPPLPP 106
+PA + V A+ ++ A P S P PP
Sbjct: 1891 PTIPASAPTASVPLAPASASAPAPAPTPVSAPNPAPP 1927
>gi|148237270 hypermethylated in cancer 1 isoform 2 [Homo sapiens]
Length = 733
Score = 51.2 bits (121), Expect = 2e-06
Identities = 74/258 (28%), Positives = 90/258 (34%), Gaps = 56/258 (21%)
Query: 12 PAGAPGPTAAAPAPPAAAT-PFKVSLQPPGAAGAAPEPETG---ECQPAAAAEHREAAAV 67
P G PG A P A P V PP AA PE C A+ AAA+
Sbjct: 170 PYGRPGRGLRAATPVIQACYPSPVGPPPPPAAEPPSGPEAAVNTHCAELYASGPGPAAAL 229
Query: 68 PAAKMPAFSSCFEVVSGAAAPASAAAGPPGASCKPPLPPHYTSTAQITVRALGADRLLLH 127
A++ C +S + P SAA P A + LPP S A L L
Sbjct: 230 CASERRCSPLCGLDLSKKSPPGSAAPERPLAERE--LPPRPDSPPSAGPAAYKEPPLALP 287
Query: 128 GPDPVPGAAGSAAAPRGRCLLLAPAPAAPVPPRRGSSAWLLEELLRPDCPEPAGLDATRE 187
P+P AAP P P RG S PEP G +
Sbjct: 288 SLPPLPFQKLEEAAP-------------PSDPFRGGSG--------SPGPEPPGRP---D 323
Query: 188 GPDRNFRLSEHRQALAAAKHRGPAATPGSPDPGPGPWGEEHLAERGPRGWERGGDRCDAP 247
GP +R +H +PG G +G+E ERG +RC+
Sbjct: 324 GPSLLYRWMKH-------------------EPGLGSYGDELGRERGSPS-----ERCEER 359
Query: 248 GGDAARRP--DPEAEAPP 263
GGDAA P P APP
Sbjct: 360 GGDAAVSPGGPPLGLAPP 377
>gi|61676186 hypermethylated in cancer 1 isoform 1 [Homo sapiens]
Length = 714
Score = 51.2 bits (121), Expect = 2e-06
Identities = 74/258 (28%), Positives = 90/258 (34%), Gaps = 56/258 (21%)
Query: 12 PAGAPGPTAAAPAPPAAAT-PFKVSLQPPGAAGAAPEPETG---ECQPAAAAEHREAAAV 67
P G PG A P A P V PP AA PE C A+ AAA+
Sbjct: 151 PYGRPGRGLRAATPVIQACYPSPVGPPPPPAAEPPSGPEAAVNTHCAELYASGPGPAAAL 210
Query: 68 PAAKMPAFSSCFEVVSGAAAPASAAAGPPGASCKPPLPPHYTSTAQITVRALGADRLLLH 127
A++ C +S + P SAA P A + LPP S A L L
Sbjct: 211 CASERRCSPLCGLDLSKKSPPGSAAPERPLAERE--LPPRPDSPPSAGPAAYKEPPLALP 268
Query: 128 GPDPVPGAAGSAAAPRGRCLLLAPAPAAPVPPRRGSSAWLLEELLRPDCPEPAGLDATRE 187
P+P AAP P P RG S PEP G +
Sbjct: 269 SLPPLPFQKLEEAAP-------------PSDPFRGGSG--------SPGPEPPGRP---D 304
Query: 188 GPDRNFRLSEHRQALAAAKHRGPAATPGSPDPGPGPWGEEHLAERGPRGWERGGDRCDAP 247
GP +R +H +PG G +G+E ERG +RC+
Sbjct: 305 GPSLLYRWMKH-------------------EPGLGSYGDELGRERGSPS-----ERCEER 340
Query: 248 GGDAARRP--DPEAEAPP 263
GGDAA P P APP
Sbjct: 341 GGDAAVSPGGPPLGLAPP 358
>gi|122937267 lemur tyrosine kinase 3 [Homo sapiens]
Length = 1489
Score = 51.2 bits (121), Expect = 2e-06
Identities = 80/303 (26%), Positives = 99/303 (32%), Gaps = 59/303 (19%)
Query: 14 GAPGPTAA---APAPPAAATPFKVSLQPPGAAGAAPEPETGECQPAAAAEHREAAAVPAA 70
G P P + APAP A + PG G P P+ G +P E P A
Sbjct: 1073 GEPAPETSLERAPAPSAVVSSRNGGETAPGPLG--PAPKNGTLEPGTERRAPETGGAPRA 1130
Query: 71 KMPAFSSCFEVVSGAAAPASAAAGPPGA-------------SCKP-PLPPHYTSTAQITV 116
+ ++ SG AP P G + +P P PP +
Sbjct: 1131 ---PGAGRLDLGSGGRAPVGTGTAPGGGPGSGVDAKAGWVDNTRPQPPPPPLPPPPEAQP 1187
Query: 117 RALGADRLLLHGPDPVPGAAGSAAAPRGRCLLLAPAPAAPVPPRRGSSAWLLEELLRPDC 176
R L +P P A AP G P AP G +A L P
Sbjct: 1188 RRL----------EPAPPRARPEVAPEGE-------PGAPDSRAGGDTA--LSGDGDPPK 1228
Query: 177 PEPAGLDATREGPDRNFRLSEHRQALAAAKHRGPAATP--GSPDPGPG----PWGEEHLA 230
PE G + R D Q A A P +P PGPG PW A
Sbjct: 1229 PERKGPEMPRLFLDLGPPQGNSEQIKARLSRLSLALPPLTLTPFPGPGPRRPPW---EGA 1285
Query: 231 ERGPRGWERGGDRCDAPG------GDAARRPDPEAEAPPAGSIEAAPS---SAAEPVIVS 281
+ G G E GG P D D EA AP A + P +A PV+VS
Sbjct: 1286 DAGAAGGEAGGAGAPGPAEEDGEDEDEDEEEDEEAAAPGAAAGPRGPGRARAAPVPVVVS 1345
Query: 282 RSD 284
+D
Sbjct: 1346 SAD 1348
Score = 42.0 bits (97), Expect = 0.001
Identities = 44/159 (27%), Positives = 54/159 (33%), Gaps = 39/159 (24%)
Query: 66 AVPAAKMPAFSSCFEVVSGAAAPASAAAGPPGASCKPPLPPHYTSTAQITVRALGADRLL 125
A PA+ P F + + GAAAP GPP A PP PP
Sbjct: 752 APPASAPPEF---LDPLMGAAAPQYPGRGPPPAPPPPPPPPR------------------ 790
Query: 126 LHGPDPVPGAAGSAAAPRGRCLLLAPAPAAPVP-PRRGSSAWLLEELLRPDCPEPAGLDA 184
A AA+P + +P P P+ G S + E P+ P G A
Sbjct: 791 --------APADPAASPDPPSAVASPGSGLSSPGPKPGDSGYETETPFSPEGAFPGGGAA 842
Query: 185 TREGPDRNFRLSEHRQALAAAKHRGPAATPGSPDPGPGP 223
EG R A + P A PDPGP P
Sbjct: 843 EEEGVPR---------PRAPPEPPDPGAPRPPPDPGPLP 872
Score = 36.2 bits (82), Expect = 0.068
Identities = 74/303 (24%), Positives = 96/303 (31%), Gaps = 49/303 (16%)
Query: 23 PAPPAAATPFKVSLQPPGAAGAAPEPETGECQPAAAAEHREAAAVPAAKMPAFSSCFEVV 82
PA +A+ F +S P GA ET PA R A P E
Sbjct: 625 PAQSSASGSFLLSGWDPEGRGAG---ETLAGDPAEVLGERGTA-------PWVEEEEEEE 674
Query: 83 SGAAAPASAAAGPPGASCKPPLPPHYTSTAQITVRALGADRLLLHGPDPVPGAAGSAA-- 140
G++ +++ G S + PLP + R L L D V G G A
Sbjct: 675 EGSSPGEDSSSLGGGPSRRGPLP------CPLCSREGACSCLPLERGDAVAGWGGHPALG 728
Query: 141 ------------APRGRCLLLAPAPAAPVPPRRGSSAWLLEELLRPDCPEPAGLDATREG 188
A RG L AP A PP L+ L+ P+ G
Sbjct: 729 CPHPPEDDSSLRAERGSLADLPMAPPASAPPE------FLDPLMGAAAPQYPGRGPPPAP 782
Query: 189 PDRNFRLSEHRQALAAAKHRGPAATPGS----PDPGPGPWGEEHLAERGPRGWERGGDRC 244
P A+ A+PGS P P PG G E P G
Sbjct: 783 PPPPPPPRAPADPAASPDPPSAVASPGSGLSSPGPKPGDSGYETETPFSPEG-------- 834
Query: 245 DAPGGDAARRPD-PEAEAPPAGSIEAAPSSAAEPVIVSRSDPRDEKLALYLAEVEKQDKY 303
PGG AA P APP AP +P + PR++ + E+
Sbjct: 835 AFPGGGAAEEEGVPRPRAPPEPPDPGAPRPPPDPGPLPLPGPREKPTFVVQVSTEQLLMS 894
Query: 304 LRQ 306
LR+
Sbjct: 895 LRE 897
Score = 32.7 bits (73), Expect = 0.75
Identities = 26/91 (28%), Positives = 37/91 (40%), Gaps = 8/91 (8%)
Query: 16 PGPTAAAPAPPAAATPFKVSLQPPGAAGAAPEPETGECQPAAAAEHREAAAVPAAKMPAF 75
P P APA PAA+ ++ PG+ ++P P+ G+ + E P P
Sbjct: 785 PPPPPRAPADPAASPDPPSAVASPGSGLSSPGPKPGD-----SGYETETPFSPEGAFPGG 839
Query: 76 SSCFEVVSGAAAPASAAAGP-PGASCKPPLP 105
+ E G P + P PGA PP P
Sbjct: 840 GAAEE--EGVPRPRAPPEPPDPGAPRPPPDP 868
>gi|62177127 myosin heavy chain Myr 8 [Homo sapiens]
Length = 1858
Score = 51.2 bits (121), Expect = 2e-06
Identities = 82/308 (26%), Positives = 110/308 (35%), Gaps = 68/308 (22%)
Query: 12 PAGAPGPTAAA--PAPPAAATPFKVSLQPPG-----------AAGAAPEPETGECQPAAA 58
PAGAPG A P P A P PPG G A P++ + P +
Sbjct: 1376 PAGAPGAAARVLTPGTPQCALP---PAAPPGDEDDSEPVYIEMLGHAARPDSPD--PGES 1430
Query: 59 AEHREAAAVPAAKMPAFSSCFEVVSGAA------APASAAAGPPGASC--KPPLP---PH 107
+P P S ++ GA+ AP AAGPPG +C PP P PH
Sbjct: 1431 VYEEMKCCLPDDGGPGAGSF--LLHGASPPLLHRAPEDEAAGPPGDACDIPPPFPNLLPH 1488
Query: 108 YTSTAQITVRALGADRLLLHGPDPVPGAAGSAAAPRGRCLLLAPAPAAPVPPRRGSSAWL 167
LL+ P PV + S +P L P +P +
Sbjct: 1489 -------------RPPLLVFPPTPVTCSPASDESP------LTPLEVKKLPVLETN---- 1525
Query: 168 LEELLRPDCPEPAGLDATREGPDRNFRLSEHRQALAAAKHR-GPAATPGSPDPGPGPWGE 226
L+ ++P+ P ++ R + AL R P +TP P P PGP
Sbjct: 1526 LKYPVQPEGSSPLSPQYSKSQKGDGDRPASPGLALFNGSGRASPPSTPPPPPPPPGPPPA 1585
Query: 227 -----EHLA---ERGPRGWERGGDRCDAPGGDAARRPDPEAEAPPAGSIEAAPSSAAEPV 278
HLA E P + G +AP P P + AP AG + P PV
Sbjct: 1586 PYRPCAHLAFPPEPAPVNAGKAGPSAEAP----KVHPKPNS-APVAGPCSSFPKIPYSPV 1640
Query: 279 IVSRSDPR 286
+R+D R
Sbjct: 1641 KATRADAR 1648
>gi|169217659 PREDICTED: similar to ectonucleotide
pyrophosphatase/phosphodiesterase 5 [Homo sapiens]
Length = 542
Score = 50.8 bits (120), Expect = 3e-06
Identities = 77/304 (25%), Positives = 105/304 (34%), Gaps = 86/304 (28%)
Query: 17 GPTAAAPAPPAAATPFKVSLQPPGAA----GAAPEPETGECQ---PAAAAEHREAAAVPA 69
GP + AP P +A ++ PG A G AP P + Q P +A HR A
Sbjct: 247 GPASRAPNPDSAPPKLRILGPAPGPASEDHGLAPGPSSNPPQLRLPESA--HRLAV---- 300
Query: 70 AKMPAFSSCFEVVSGAAAPASAAAGPPGASCKPPLPPHYTSTAQITVRALGADRLLLHG- 128
C+++V+ P + SC PH Q L A L G
Sbjct: 301 --------CYDIVNAPPLPRLLSPSLGLLSC-----PHARHCLQDATN-LNASEAQLPGS 346
Query: 129 --PDPVPGAAG--------SAAAPRGRCLLLAPAPAAPVPPRRGSSAWLLE------ELL 172
P P PG A +APR L ++P PA +PPR L+ ++
Sbjct: 347 PYPGPAPGTANLDSPQDLPQQSAPRTHLLTVSPGPAPSLPPRTALGPPPLQSRPGFLQVS 406
Query: 173 RPDC--------PEPAGLDATREGPDRNFRLSEHRQAL-------AAAKHRG-------- 209
R C E AG + +G +R F + ++ A+ + RG
Sbjct: 407 RQRCGSAHVMAPEENAGTELWLQGFERRFLAARSLRSFPWQVAGGASGEARGGRGSPGAD 466
Query: 210 ----PAATPGSP-------------DPGPGPWGEEHLAE--RGPRGWERGGDRCDAPGGD 250
A TPG+P PGP PWG +A PR R PGG
Sbjct: 467 GMGLGAETPGAPATCVPGLSPVRAARPGPRPWGLARVARTPSAPRAGGGSWGRLHRPGGQ 526
Query: 251 AARR 254
R
Sbjct: 527 TRVR 530
>gi|169167316 PREDICTED: similar to ectonucleotide
pyrophosphatase/phosphodiesterase 5 [Homo sapiens]
Length = 542
Score = 50.8 bits (120), Expect = 3e-06
Identities = 77/304 (25%), Positives = 105/304 (34%), Gaps = 86/304 (28%)
Query: 17 GPTAAAPAPPAAATPFKVSLQPPGAA----GAAPEPETGECQ---PAAAAEHREAAAVPA 69
GP + AP P +A ++ PG A G AP P + Q P +A HR A
Sbjct: 247 GPASRAPNPDSAPPKLRILGPAPGPASEDHGLAPGPSSNPPQLRLPESA--HRLAV---- 300
Query: 70 AKMPAFSSCFEVVSGAAAPASAAAGPPGASCKPPLPPHYTSTAQITVRALGADRLLLHG- 128
C+++V+ P + SC PH Q L A L G
Sbjct: 301 --------CYDIVNAPPLPRLLSPSLGLLSC-----PHARHCLQDATN-LNASEAQLPGS 346
Query: 129 --PDPVPGAAG--------SAAAPRGRCLLLAPAPAAPVPPRRGSSAWLLE------ELL 172
P P PG A +APR L ++P PA +PPR L+ ++
Sbjct: 347 PYPGPAPGTANLDSPQDLPQQSAPRTHLLTVSPGPAPSLPPRTALGPPPLQSRPGFLQVS 406
Query: 173 RPDC--------PEPAGLDATREGPDRNFRLSEHRQAL-------AAAKHRG-------- 209
R C E AG + +G +R F + ++ A+ + RG
Sbjct: 407 RQRCGSAHVMAPEENAGTELWLQGFERRFLAARSLRSFPWQVAGGASGEARGGRGSPGAD 466
Query: 210 ----PAATPGSP-------------DPGPGPWGEEHLAE--RGPRGWERGGDRCDAPGGD 250
A TPG+P PGP PWG +A PR R PGG
Sbjct: 467 GMGLGAETPGAPATCVPGLSPVRAARPGPRPWGLARVARTPSAPRAGGGSWGRLHRPGGQ 526
Query: 251 AARR 254
R
Sbjct: 527 TRVR 530
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.315 0.132 0.413
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 25,753,613
Number of Sequences: 37866
Number of extensions: 1703965
Number of successful extensions: 15022
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 156
Number of HSP's successfully gapped in prelim test: 1150
Number of HSP's that attempted gapping in prelim test: 9811
Number of HSP's gapped (non-prelim): 4725
length of query: 481
length of database: 18,247,518
effective HSP length: 106
effective length of query: 375
effective length of database: 14,233,722
effective search space: 5337645750
effective search space used: 5337645750
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.