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Search of human proteins with 223029424
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|223029424 large subunit GTPase 1 [Homo sapiens]
(658 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|223029424 large subunit GTPase 1 [Homo sapiens] 1352 0.0
gi|38788319 guanine nucleotide binding protein-like 1 [Homo sapi... 172 7e-43
gi|7019419 guanine nucleotide binding protein-like 2 (nucleolar)... 92 2e-18
gi|9506611 guanine nucleotide binding protein-like 3 (nucleolar)... 84 4e-16
gi|45643129 guanine nucleotide binding protein-like 3 isoform 2 ... 59 2e-08
gi|45643127 guanine nucleotide binding protein-like 3 isoform 2 ... 59 2e-08
gi|45593130 guanine nucleotide binding protein-like 3 isoform 1 ... 59 2e-08
gi|192807334 arsenate resistance protein 2 isoform d [Homo sapiens] 45 2e-04
gi|58331218 arsenate resistance protein 2 isoform a [Homo sapiens] 45 2e-04
gi|22035677 AT rich interactive domain 4B isoform 1 [Homo sapiens] 44 5e-04
gi|192807336 arsenate resistance protein 2 isoform e [Homo sapiens] 44 6e-04
gi|192807332 arsenate resistance protein 2 isoform c [Homo sapiens] 44 6e-04
gi|55956788 nucleolin [Homo sapiens] 42 0.002
gi|84043963 eukaryotic translation initiation factor 5B [Homo sa... 42 0.002
gi|4503257 death-domain associated protein isoform a [Homo sapiens] 41 0.004
gi|215422388 death-domain associated protein isoform a [Homo sap... 41 0.004
gi|215422366 death-domain associated protein isoform b [Homo sap... 41 0.004
gi|157738619 smoothelin-like 1 [Homo sapiens] 41 0.004
gi|21361639 DIPB protein [Homo sapiens] 40 0.009
gi|51477718 TATA box binding protein-associated factor, RNA poly... 40 0.009
gi|94681063 bromodomain adjacent to zinc finger domain, 2B [Homo... 39 0.012
gi|115529449 upstream binding transcription factor, RNA polymera... 39 0.020
gi|115529451 upstream binding transcription factor, RNA polymera... 39 0.020
gi|7657671 upstream binding transcription factor, RNA polymerase... 39 0.020
gi|146219843 Snf2-related CBP activator protein [Homo sapiens] 39 0.020
gi|16445033 ACRC protein [Homo sapiens] 38 0.026
gi|4759128 solute carrier family 24 (sodium/potassium/calcium ex... 38 0.026
gi|221219020 NYD-SP11 protein [Homo sapiens] 38 0.034
gi|32484979 adaptor-related protein complex 3, beta 1 subunit [H... 38 0.034
gi|217330641 IWS1 homolog [Homo sapiens] 38 0.034
>gi|223029424 large subunit GTPase 1 [Homo sapiens]
Length = 658
Score = 1352 bits (3498), Expect = 0.0
Identities = 658/658 (100%), Positives = 658/658 (100%)
Query: 1 MGRRRAPAGGSLGRALMRHQTQRSRSHRHTDSWLHTSELNDGYDWGRLNLQSVTEQSSLD 60
MGRRRAPAGGSLGRALMRHQTQRSRSHRHTDSWLHTSELNDGYDWGRLNLQSVTEQSSLD
Sbjct: 1 MGRRRAPAGGSLGRALMRHQTQRSRSHRHTDSWLHTSELNDGYDWGRLNLQSVTEQSSLD 60
Query: 61 DFLATAELAGTEFVAEKLNIKFVPAEARTGLLSFEESQRIKKLHEENKQFLCIPRRPNWN 120
DFLATAELAGTEFVAEKLNIKFVPAEARTGLLSFEESQRIKKLHEENKQFLCIPRRPNWN
Sbjct: 61 DFLATAELAGTEFVAEKLNIKFVPAEARTGLLSFEESQRIKKLHEENKQFLCIPRRPNWN 120
Query: 121 QNTTPEELKQAEKDNFLEWRRQLVRLEEEQKLILTPFERNLDFWRQLWRVIERSDIVVQI 180
QNTTPEELKQAEKDNFLEWRRQLVRLEEEQKLILTPFERNLDFWRQLWRVIERSDIVVQI
Sbjct: 121 QNTTPEELKQAEKDNFLEWRRQLVRLEEEQKLILTPFERNLDFWRQLWRVIERSDIVVQI 180
Query: 181 VDARNPLLFRCEDLECYVKEMDANKENVILINKADLLTAEQRSAWAMYFEKEDVKVIFWS 240
VDARNPLLFRCEDLECYVKEMDANKENVILINKADLLTAEQRSAWAMYFEKEDVKVIFWS
Sbjct: 181 VDARNPLLFRCEDLECYVKEMDANKENVILINKADLLTAEQRSAWAMYFEKEDVKVIFWS 240
Query: 241 ALAGAIPLNGDSEEEANRDDRQSNTTKFGHSSFDQAEISHSESEHLPARDSPSLSENPTT 300
ALAGAIPLNGDSEEEANRDDRQSNTTKFGHSSFDQAEISHSESEHLPARDSPSLSENPTT
Sbjct: 241 ALAGAIPLNGDSEEEANRDDRQSNTTKFGHSSFDQAEISHSESEHLPARDSPSLSENPTT 300
Query: 301 DEDDSEYEDCPEEEEDDWQTCSEEDGPKEEDCSQDWKESSTADSEARSRKTPQKRQIHNF 360
DEDDSEYEDCPEEEEDDWQTCSEEDGPKEEDCSQDWKESSTADSEARSRKTPQKRQIHNF
Sbjct: 301 DEDDSEYEDCPEEEEDDWQTCSEEDGPKEEDCSQDWKESSTADSEARSRKTPQKRQIHNF 360
Query: 361 SHLVSKQELLELFKELHTGRKVKDGQLTVGLVGYPNVGKSSTINTIMGNKKVSVSATPGH 420
SHLVSKQELLELFKELHTGRKVKDGQLTVGLVGYPNVGKSSTINTIMGNKKVSVSATPGH
Sbjct: 361 SHLVSKQELLELFKELHTGRKVKDGQLTVGLVGYPNVGKSSTINTIMGNKKVSVSATPGH 420
Query: 421 TKHFQTLYVEPGLCLCDCPGLVMPSFVSTKAEMTCSGILPIDQMRDHVPPVSLVCQNIPR 480
TKHFQTLYVEPGLCLCDCPGLVMPSFVSTKAEMTCSGILPIDQMRDHVPPVSLVCQNIPR
Sbjct: 421 TKHFQTLYVEPGLCLCDCPGLVMPSFVSTKAEMTCSGILPIDQMRDHVPPVSLVCQNIPR 480
Query: 481 HVLEATYGINIITPREDEDPHRPPTSEELLTAYGYMRGFMTAHGQPDQPRSARYILKDYV 540
HVLEATYGINIITPREDEDPHRPPTSEELLTAYGYMRGFMTAHGQPDQPRSARYILKDYV
Sbjct: 481 HVLEATYGINIITPREDEDPHRPPTSEELLTAYGYMRGFMTAHGQPDQPRSARYILKDYV 540
Query: 541 SGKLLYCHPPPGRDPVTFQHQHQRLLENKMNSDEIKMQLGRNKKAKQIENIVDKTFFHQE 600
SGKLLYCHPPPGRDPVTFQHQHQRLLENKMNSDEIKMQLGRNKKAKQIENIVDKTFFHQE
Sbjct: 541 SGKLLYCHPPPGRDPVTFQHQHQRLLENKMNSDEIKMQLGRNKKAKQIENIVDKTFFHQE 600
Query: 601 NVRALTKGVQAVMGYKPGSGVVTASTASSENGAGKPWKKHGNRNKKEKSRRLYKHLDM 658
NVRALTKGVQAVMGYKPGSGVVTASTASSENGAGKPWKKHGNRNKKEKSRRLYKHLDM
Sbjct: 601 NVRALTKGVQAVMGYKPGSGVVTASTASSENGAGKPWKKHGNRNKKEKSRRLYKHLDM 658
>gi|38788319 guanine nucleotide binding protein-like 1 [Homo
sapiens]
Length = 607
Score = 172 bits (437), Expect = 7e-43
Identities = 137/448 (30%), Positives = 212/448 (47%), Gaps = 58/448 (12%)
Query: 111 LCIPRRPNWNQNTTPEELKQAEKDNFLEWRRQLVRLEEEQKLILTPFERNLDFWRQLWRV 170
L PRRP W+ + E+L E+ +F ++ ++ +KL + FE NL+ WRQLWRV
Sbjct: 127 LDFPRRPPWSYEMSKEQLMSQEERSFQDYLGKIHGAYSSEKL--SYFEHNLETWRQLWRV 184
Query: 171 IERSDIVVQIVDARNPLLFRCEDLECYVKEMDANKENVILINKADLLTAEQRSAWAMYFE 230
+E SDIV+ I D R+P++ L YV + V+++NK DL AW YF
Sbjct: 185 LEMSDIVLLITDIRHPVVNFPPALYEYVTG-ELGLALVLVLNKVDLAPPALVVAWKHYFH 243
Query: 231 KE--DVKVIFWSALAG--AIPLNGDSEEEANRDDRQSNTTKFGHSSFDQAEISHSESEHL 286
+ + V+ +++ P + S + +R + T G +A E+ +
Sbjct: 244 QHYPQLHVVLFTSFPRDPRTPQDPSSVLKKSRRRGRGWTRALGPEQLLRA----CEAITV 299
Query: 287 PARDSPSLSENPTTDEDDSEYEDCPEEEEDDWQTCSEEDGPKEEDCSQDWKESSTADSEA 346
D S E D + + + EEE+ EEDGP
Sbjct: 300 GKVDLSSWREKIARDVAGATWGNGSGEEEE------EEDGP------------------- 334
Query: 347 RSRKTPQKRQIHNFSHLVSKQELLELFKELHTGRKVKDGQLTVGLVGYPNVGKSSTINTI 406
+ LV +Q + T + KDG +T+G VG+PNVGKSS IN +
Sbjct: 335 --------------AVLVEQQTDSAMEPTGPTQERYKDGVVTIGCVGFPNVGKSSLINGL 380
Query: 407 MGNKKVSVSATPGHTKHFQTLYVEPGLCLCDCPGLVMPSFVSTKAEMTCSGILPIDQMRD 466
+G K VSVS TPGHT++FQT ++ P + LCDCPGL+ PS + + ++ +GI PI Q+++
Sbjct: 381 VGRKVVSVSRTPGHTRYFQTYFLTPSVKLCDCPGLIFPSLLPRQLQV-LAGIYPIAQIQE 439
Query: 467 HVPPVSLVCQNIPRHVLEATYGINIITPR-EDEDPHRPPTSEELLTAYGYMRGFMTAH-G 524
V + IP L +++ P ED P + ++ A+ RG+ TA
Sbjct: 440 PYTAVGYLASRIPVQAL-----LHLRHPEAEDPSAEHPWCAWDICEAWAEKRGYKTAKAA 494
Query: 525 QPDQPRSARYILKDYVSGKLLYCHPPPG 552
+ D R+A +L+ V G+L C PPG
Sbjct: 495 RNDVYRAANSLLRLAVDGRLSLCFHPPG 522
>gi|7019419 guanine nucleotide binding protein-like 2 (nucleolar)
[Homo sapiens]
Length = 731
Score = 92.0 bits (227), Expect = 2e-18
Identities = 53/189 (28%), Positives = 95/189 (50%), Gaps = 16/189 (8%)
Query: 368 ELLELFKELHTGRKVKDGQLTVGLVGYPNVGKSSTINTIMGNKKVSVSATPGHTKHFQTL 427
+LL F +LHT +K Q++VG +GYPNVGKSS INT+ K +V+ G TK +Q +
Sbjct: 296 QLLRQFGKLHTDKK----QISVGFIGYPNVGKSSVINTLRSKKVCNVAPIAGETKVWQYI 351
Query: 428 YVEPGLCLCDCPGLVMPSFVSTKAEMTCSGILPIDQMRDHVPPVSLVCQNIPRHVLEATY 487
+ + L DCPG+V PS ++ ++ G++ +++++ + V + + TY
Sbjct: 352 TLMRRIFLIDCPGVVYPS-EDSETDIVLKGVVQVEKIKSPEDHIGAVLERAKPEYISKTY 410
Query: 488 GINIITPREDEDPHRPPTSEELLTAYGYMRGFMTAHGQPDQPRSARYILKDYVSGKLLYC 547
I+ +E+ L + G + G+PD + +L D+ G++ +
Sbjct: 411 KID-----------SWENAEDFLEKLAFRTGKLLKGGEPDLQTVGKMVLNDWQRGRIPFF 459
Query: 548 HPPPGRDPV 556
PP +P+
Sbjct: 460 VKPPNAEPL 468
Score = 55.1 bits (131), Expect = 2e-07
Identities = 36/137 (26%), Positives = 67/137 (48%), Gaps = 11/137 (8%)
Query: 115 RRPNWNQNTTPEELKQAE---------KDNFLEWRRQLVRLEEEQKLILTPFERNLDFWR 165
+RPN + ++ AE KD L VR E ++++ + + W
Sbjct: 151 KRPNLFASDMQSLIENAEMSTESYDQGKDRDLVTEDTGVRNEAQEEIYKKGQSKRI--WG 208
Query: 166 QLWRVIERSDIVVQIVDARNPLLFRCEDLECYVKEMDANKENVILINKADLLTAEQRSAW 225
+L++VI+ SD+VVQ++DAR+P+ R +E Y+K+ K + ++NK DL+ W
Sbjct: 209 ELYKVIDSSDVVVQVLDARDPMGTRSPHIETYLKKEKPWKHLIFVLNKCDLVPTWATKRW 268
Query: 226 AMYFEKEDVKVIFWSAL 242
++ + F ++L
Sbjct: 269 VAVLSQDYPTLAFHASL 285
>gi|9506611 guanine nucleotide binding protein-like 3
(nucleolar)-like [Homo sapiens]
Length = 582
Score = 84.0 bits (206), Expect = 4e-16
Identities = 52/165 (31%), Positives = 83/165 (50%), Gaps = 13/165 (7%)
Query: 387 LTVGLVGYPNVGKSSTINTIMGNKKVSVSATPGHTKHFQTLYVEPGLCLCDCPGLVMPSF 446
+ VG+VG PNVGKSS IN++ ++ SV A PG TK Q +Y++ + L D PG+V
Sbjct: 253 IRVGVVGLPNVGKSSLINSLKRSRACSVGAVPGITKFMQEVYLDKFIRLLDAPGIVPGP- 311
Query: 447 VSTKAEMTCSGILPIDQMRDHVPPVSLVCQNIPRHVLEATYGINIITPREDEDPHRPPTS 506
+++ + + ++ D V PV + Q + YG++ T+
Sbjct: 312 -NSEVGTILRNCVHVQKLADPVTPVETILQRCNLEEISNYYGVSGF-----------QTT 359
Query: 507 EELLTAYGYMRGFMTAHGQPDQPRSARYILKDYVSGKLLYCHPPP 551
E LTA + G G Q ++A+ +L D+VSGK+ + PPP
Sbjct: 360 EHFLTAVAHRLGKKKKGGLYSQEQAAKAVLADWVSGKISFYIPPP 404
Score = 55.5 bits (132), Expect = 2e-07
Identities = 26/76 (34%), Positives = 45/76 (59%)
Query: 163 FWRQLWRVIERSDIVVQIVDARNPLLFRCEDLECYVKEMDANKENVILINKADLLTAEQR 222
++++ +V+E SD++++++DAR+PL RC +E V NK+ V+++NK DL+ E
Sbjct: 124 YYKEFRKVVEYSDVILEVLDARDPLGCRCFQMEEAVLRAQGNKKLVLVLNKIDLVPKEVV 183
Query: 223 SAWAMYFEKEDVKVIF 238
W Y E V F
Sbjct: 184 EKWLDYLRNELPTVAF 199
>gi|45643129 guanine nucleotide binding protein-like 3 isoform 2
[Homo sapiens]
Length = 537
Score = 58.5 bits (140), Expect = 2e-08
Identities = 40/134 (29%), Positives = 69/134 (51%), Gaps = 22/134 (16%)
Query: 126 EELKQAEK---DNFLEWRRQLVRLEEEQKLILTPFERNLD------------------FW 164
EELKQ +K LE +R+L + + + P E+ +
Sbjct: 60 EELKQQQKLDRQKELEKKRKLETNPDIKPSNVEPMEKEFGLCKTENKAKSGKQNSKKLYC 119
Query: 165 RQLWRVIERSDIVVQIVDARNPLLFRCEDLECYVKEMDANKENVILINKADLLTAEQRSA 224
++L +VIE SD+V++++DAR+PL RC +E + + K+ V+++NK+DL+ E +
Sbjct: 120 QELKKVIEASDVVLEVLDARDPLGCRCPQVEEAIVQ-SGQKKLVLILNKSDLVPKENLES 178
Query: 225 WAMYFEKEDVKVIF 238
W Y +KE V+F
Sbjct: 179 WLNYLKKELPTVVF 192
Score = 55.1 bits (131), Expect = 2e-07
Identities = 47/225 (20%), Positives = 98/225 (43%), Gaps = 18/225 (8%)
Query: 387 LTVGLVGYPNVGKSSTINTIMGNKKVSVSATPGHTKHFQTLYVEPGLCLCDCPGLVMPSF 446
+ VG++G+PNVGKSS IN++ + +V + G T+ Q + ++ + + D P ++
Sbjct: 243 IRVGVIGFPNVGKSSIINSLKQEQMCNVGVSMGLTRSMQVVPLDKQITIIDSPSFIVSPL 302
Query: 447 VSTKAEMTCSGILPIDQMRDHVPPVSLVCQNIPRHVLEATYGINIITPREDEDPHRPPTS 506
S+ A + I+ ++ +++ Q R V+ + P S
Sbjct: 303 NSSSA-LALRSPASIEVVKPMEAASAILSQADARQVV-----LKYTVPGYRN-------S 349
Query: 507 EELLTAYGYMRGFMTAHGQPDQPRSARYILKDYVSGKL-LYCHPPPGRDPVTFQHQHQRL 565
E T RG G P+ +A+ + ++ L YCHPP P + ++ +
Sbjct: 350 LEFFTVLAQRRGMHQKGGIPNVEGAAKLLWSEWTGASLAYYCHPPTSWTPPPYFNESIVV 409
Query: 566 -LENKMNSDEIKMQLGRNKKAKQIENIVDKTFFHQENVRALTKGV 609
+++ N +E++ ++ +A + ++ + F LT G+
Sbjct: 410 DMKSGFNLEELEKNNAQSIRAIKGPHLANSILFQSS---GLTNGI 451
>gi|45643127 guanine nucleotide binding protein-like 3 isoform 2
[Homo sapiens]
Length = 537
Score = 58.5 bits (140), Expect = 2e-08
Identities = 40/134 (29%), Positives = 69/134 (51%), Gaps = 22/134 (16%)
Query: 126 EELKQAEK---DNFLEWRRQLVRLEEEQKLILTPFERNLD------------------FW 164
EELKQ +K LE +R+L + + + P E+ +
Sbjct: 60 EELKQQQKLDRQKELEKKRKLETNPDIKPSNVEPMEKEFGLCKTENKAKSGKQNSKKLYC 119
Query: 165 RQLWRVIERSDIVVQIVDARNPLLFRCEDLECYVKEMDANKENVILINKADLLTAEQRSA 224
++L +VIE SD+V++++DAR+PL RC +E + + K+ V+++NK+DL+ E +
Sbjct: 120 QELKKVIEASDVVLEVLDARDPLGCRCPQVEEAIVQ-SGQKKLVLILNKSDLVPKENLES 178
Query: 225 WAMYFEKEDVKVIF 238
W Y +KE V+F
Sbjct: 179 WLNYLKKELPTVVF 192
Score = 55.1 bits (131), Expect = 2e-07
Identities = 47/225 (20%), Positives = 98/225 (43%), Gaps = 18/225 (8%)
Query: 387 LTVGLVGYPNVGKSSTINTIMGNKKVSVSATPGHTKHFQTLYVEPGLCLCDCPGLVMPSF 446
+ VG++G+PNVGKSS IN++ + +V + G T+ Q + ++ + + D P ++
Sbjct: 243 IRVGVIGFPNVGKSSIINSLKQEQMCNVGVSMGLTRSMQVVPLDKQITIIDSPSFIVSPL 302
Query: 447 VSTKAEMTCSGILPIDQMRDHVPPVSLVCQNIPRHVLEATYGINIITPREDEDPHRPPTS 506
S+ A + I+ ++ +++ Q R V+ + P S
Sbjct: 303 NSSSA-LALRSPASIEVVKPMEAASAILSQADARQVV-----LKYTVPGYRN-------S 349
Query: 507 EELLTAYGYMRGFMTAHGQPDQPRSARYILKDYVSGKL-LYCHPPPGRDPVTFQHQHQRL 565
E T RG G P+ +A+ + ++ L YCHPP P + ++ +
Sbjct: 350 LEFFTVLAQRRGMHQKGGIPNVEGAAKLLWSEWTGASLAYYCHPPTSWTPPPYFNESIVV 409
Query: 566 -LENKMNSDEIKMQLGRNKKAKQIENIVDKTFFHQENVRALTKGV 609
+++ N +E++ ++ +A + ++ + F LT G+
Sbjct: 410 DMKSGFNLEELEKNNAQSIRAIKGPHLANSILFQSS---GLTNGI 451
>gi|45593130 guanine nucleotide binding protein-like 3 isoform 1
[Homo sapiens]
Length = 549
Score = 58.5 bits (140), Expect = 2e-08
Identities = 40/134 (29%), Positives = 69/134 (51%), Gaps = 22/134 (16%)
Query: 126 EELKQAEK---DNFLEWRRQLVRLEEEQKLILTPFERNLD------------------FW 164
EELKQ +K LE +R+L + + + P E+ +
Sbjct: 72 EELKQQQKLDRQKELEKKRKLETNPDIKPSNVEPMEKEFGLCKTENKAKSGKQNSKKLYC 131
Query: 165 RQLWRVIERSDIVVQIVDARNPLLFRCEDLECYVKEMDANKENVILINKADLLTAEQRSA 224
++L +VIE SD+V++++DAR+PL RC +E + + K+ V+++NK+DL+ E +
Sbjct: 132 QELKKVIEASDVVLEVLDARDPLGCRCPQVEEAIVQ-SGQKKLVLILNKSDLVPKENLES 190
Query: 225 WAMYFEKEDVKVIF 238
W Y +KE V+F
Sbjct: 191 WLNYLKKELPTVVF 204
Score = 55.1 bits (131), Expect = 2e-07
Identities = 47/225 (20%), Positives = 98/225 (43%), Gaps = 18/225 (8%)
Query: 387 LTVGLVGYPNVGKSSTINTIMGNKKVSVSATPGHTKHFQTLYVEPGLCLCDCPGLVMPSF 446
+ VG++G+PNVGKSS IN++ + +V + G T+ Q + ++ + + D P ++
Sbjct: 255 IRVGVIGFPNVGKSSIINSLKQEQMCNVGVSMGLTRSMQVVPLDKQITIIDSPSFIVSPL 314
Query: 447 VSTKAEMTCSGILPIDQMRDHVPPVSLVCQNIPRHVLEATYGINIITPREDEDPHRPPTS 506
S+ A + I+ ++ +++ Q R V+ + P S
Sbjct: 315 NSSSA-LALRSPASIEVVKPMEAASAILSQADARQVV-----LKYTVPGYRN-------S 361
Query: 507 EELLTAYGYMRGFMTAHGQPDQPRSARYILKDYVSGKL-LYCHPPPGRDPVTFQHQHQRL 565
E T RG G P+ +A+ + ++ L YCHPP P + ++ +
Sbjct: 362 LEFFTVLAQRRGMHQKGGIPNVEGAAKLLWSEWTGASLAYYCHPPTSWTPPPYFNESIVV 421
Query: 566 -LENKMNSDEIKMQLGRNKKAKQIENIVDKTFFHQENVRALTKGV 609
+++ N +E++ ++ +A + ++ + F LT G+
Sbjct: 422 DMKSGFNLEELEKNNAQSIRAIKGPHLANSILFQSS---GLTNGI 463
>gi|192807334 arsenate resistance protein 2 isoform d [Homo sapiens]
Length = 872
Score = 45.4 bits (106), Expect = 2e-04
Identities = 32/124 (25%), Positives = 56/124 (45%), Gaps = 21/124 (16%)
Query: 251 DSEEEANRDDRQSNTTKFGHSSFDQAEISHSESEHLPARDSPSLSENPTTDEDDSEYEDC 310
DSE+EA + ++ N G SFD+ +S SESE SE
Sbjct: 340 DSEKEAKKSSKKRNRKHSGDDSFDEGSVSESESE--------------------SESGQA 379
Query: 311 PEEEEDDWQTCSEEDGPKEEDCSQDWKESSTADSEARSRKTPQKRQIHNFSHLVSKQELL 370
EE+E+ + E++ PKEE+ + K+++ + + R + N + +S+ E++
Sbjct: 380 EEEKEEAEEALKEKEKPKEEEWEKP-KDAAGLECKPRPLHKTCSLFMRNIAPNISRAEII 438
Query: 371 ELFK 374
L K
Sbjct: 439 SLCK 442
>gi|58331218 arsenate resistance protein 2 isoform a [Homo sapiens]
Length = 876
Score = 45.4 bits (106), Expect = 2e-04
Identities = 32/124 (25%), Positives = 56/124 (45%), Gaps = 21/124 (16%)
Query: 251 DSEEEANRDDRQSNTTKFGHSSFDQAEISHSESEHLPARDSPSLSENPTTDEDDSEYEDC 310
DSE+EA + ++ N G SFD+ +S SESE SE
Sbjct: 340 DSEKEAKKSSKKRNRKHSGDDSFDEGSVSESESE--------------------SESGQA 379
Query: 311 PEEEEDDWQTCSEEDGPKEEDCSQDWKESSTADSEARSRKTPQKRQIHNFSHLVSKQELL 370
EE+E+ + E++ PKEE+ + K+++ + + R + N + +S+ E++
Sbjct: 380 EEEKEEAEEALKEKEKPKEEEWEKP-KDAAGLECKPRPLHKTCSLFMRNIAPNISRAEII 438
Query: 371 ELFK 374
L K
Sbjct: 439 SLCK 442
>gi|22035677 AT rich interactive domain 4B isoform 1 [Homo sapiens]
Length = 1312
Score = 43.9 bits (102), Expect = 5e-04
Identities = 35/150 (23%), Positives = 68/150 (45%), Gaps = 10/150 (6%)
Query: 190 RCEDLECYVKEMDANKEN------VILINKADLLTAEQRSAWAMYFEKEDVKVIFWSA-- 241
+C++ E VKE+ +EN + + + +++ E++ KE++K S
Sbjct: 416 QCKECE-NVKEIKVKEENETEIKEIKMEEERNIIPREEKPIEDEIERKENIKPSLGSKKN 474
Query: 242 LAGAIPLNGDSEEEANRDDRQSNTTKFGHSSFDQAEISHSESEHLPARDSPSLSENPTTD 301
L +IP + D E+E N + N D + S + + A + + S + T
Sbjct: 475 LLESIPTHSDQEKEVNIKKPEDNEN-LDDKDDDTTRVDESLNIKVEAEEEKAKSGDETNK 533
Query: 302 EDDSEYEDCPEEEEDDWQTCSEEDGPKEED 331
E+D + E+ EEEE++ + E+D E+
Sbjct: 534 EEDEDDEEAEEEEEEEEEEEDEDDDDNNEE 563
Score = 29.6 bits (65), Expect = 9.2
Identities = 30/111 (27%), Positives = 50/111 (45%), Gaps = 15/111 (13%)
Query: 272 SFDQAEISHSESEHLPARDSPSLSENPTTDEDDSEYEDCPEEEEDDWQTCSEEDGPKEED 331
+F+QA H +S +PA L E+ ++ E + E EEEEDD + + +EE+
Sbjct: 248 AFEQALEFH-KSRTIPANWKTELKEDSSSSEAEEE-----EEEEDDEKEKEDNSSEEEEE 301
Query: 332 CSQDWKESSTADSE----ARSRKTP-QKRQIHNFSHLVSKQELLELFKELH 377
+E + R TP KR + + +L L +LF+ +H
Sbjct: 302 IEPFPEERENFLQQLYKFMEDRGTPINKRPVLGYRNL----NLFKLFRLVH 348
>gi|192807336 arsenate resistance protein 2 isoform e [Homo sapiens]
Length = 871
Score = 43.5 bits (101), Expect = 6e-04
Identities = 32/124 (25%), Positives = 58/124 (46%), Gaps = 22/124 (17%)
Query: 251 DSEEEANRDDRQSNTTKFGHSSFDQAEISHSESEHLPARDSPSLSENPTTDEDDSEYEDC 310
DSE+EA + ++ N G SFD+ +S SESE SE+
Sbjct: 340 DSEKEAKKSSKKRNRKHSGDDSFDEGSVSESESE----------SESGQA---------- 379
Query: 311 PEEEEDDWQTCSEEDGPKEEDCSQDWKESSTADSEARSRKTPQKRQIHNFSHLVSKQELL 370
EEE+++ + E++ PKEE+ + K+++ + + R + N + +S+ E++
Sbjct: 380 -EEEKEEAEALKEKEKPKEEEWEKP-KDAAGLECKPRPLHKTCSLFMRNIAPNISRAEII 437
Query: 371 ELFK 374
L K
Sbjct: 438 SLCK 441
>gi|192807332 arsenate resistance protein 2 isoform c [Homo sapiens]
Length = 875
Score = 43.5 bits (101), Expect = 6e-04
Identities = 32/124 (25%), Positives = 58/124 (46%), Gaps = 22/124 (17%)
Query: 251 DSEEEANRDDRQSNTTKFGHSSFDQAEISHSESEHLPARDSPSLSENPTTDEDDSEYEDC 310
DSE+EA + ++ N G SFD+ +S SESE SE+
Sbjct: 340 DSEKEAKKSSKKRNRKHSGDDSFDEGSVSESESE----------SESGQA---------- 379
Query: 311 PEEEEDDWQTCSEEDGPKEEDCSQDWKESSTADSEARSRKTPQKRQIHNFSHLVSKQELL 370
EEE+++ + E++ PKEE+ + K+++ + + R + N + +S+ E++
Sbjct: 380 -EEEKEEAEALKEKEKPKEEEWEKP-KDAAGLECKPRPLHKTCSLFMRNIAPNISRAEII 437
Query: 371 ELFK 374
L K
Sbjct: 438 SLCK 441
>gi|55956788 nucleolin [Homo sapiens]
Length = 710
Score = 42.0 bits (97), Expect = 0.002
Identities = 31/129 (24%), Positives = 64/129 (49%), Gaps = 5/129 (3%)
Query: 230 EKEDVKVIFWSAL--AGAIPLNGDSEEEANRDDRQSNTTKFGHSSFDQAEISHSESEHLP 287
E ED I +A+ A A P + D ++E + DD + + S + E + ++ +
Sbjct: 163 EDEDEDEIEPAAMKAAAAAPASEDEDDEDDEDDEDDDDDEEDDSEEEAMETTPAKGKKA- 221
Query: 288 ARDSPSLSENPTTDEDDSEYEDCPEEEEDDWQTCSEEDGPKEEDCSQDWKESSTADSEAR 347
A+ P ++N DED E ED +E++DD + ++D +E+ ++ +E ++ +
Sbjct: 222 AKVVPVKAKNVAEDED--EEEDDEDEDDDDDEDDEDDDDEDDEEEEEEEEEEPVKEAPGK 279
Query: 348 SRKTPQKRQ 356
+K K++
Sbjct: 280 RKKEMAKQK 288
Score = 32.7 bits (73), Expect = 1.1
Identities = 22/75 (29%), Positives = 35/75 (46%), Gaps = 9/75 (12%)
Query: 251 DSEEEANRDDRQSNTTKFGHSSFDQAEISHSESEHLPARDSPSLSENPTTDEDDSEYEDC 310
DS+EE + D + D + E E PA + + + DEDD + ED
Sbjct: 144 DSDEEEDDDSEEDEE--------DDEDEDEDEDEIEPAAMKAAAAAPASEDEDDEDDED- 194
Query: 311 PEEEEDDWQTCSEED 325
E+++DD + SEE+
Sbjct: 195 DEDDDDDEEDDSEEE 209
>gi|84043963 eukaryotic translation initiation factor 5B [Homo
sapiens]
Length = 1220
Score = 41.6 bits (96), Expect = 0.002
Identities = 53/254 (20%), Positives = 101/254 (39%), Gaps = 41/254 (16%)
Query: 247 PLNGDSEEEANRDDRQSNTTKFGHSSFDQAEISHSESEHLPARDSPSLSENPTTDEDDSE 306
P + E+A DD ++ +S ++ E H+ +++P E +E++ E
Sbjct: 492 PEEEEDTEDAGLDDWEAM------ASDEETEKVEGNKVHIEVKENPEEEEEEEEEEEEDE 545
Query: 307 YEDCPEEEE----------DDWQTCSEEDGPKEEDCSQDWKESSTADSEARSRKTPQKRQ 356
+ EEEE +D + E+D K D + SS ++ ++ +T ++R
Sbjct: 546 ESEEEEEEEGESEGSEGDEEDEKVSDEKDSGKTLDKKPSKEMSSDSEYDSDDDRTKEERA 605
Query: 357 IHNFSHLVSKQELLELFKELHTGRKVKDGQLTVGLVGYPNVGKSSTINTI---------- 406
+ K+ LE K ++T K++ + V +G+ + GK+ ++ +
Sbjct: 606 YDKAKRRIEKRR-LEHSKNVNT-EKLRAPIICV--LGHVDTGKTKILDKLRHTHVQDGEA 661
Query: 407 ------MGNKKVSVSATPGHTKHFQTLYVE----PGLCLCDCPGLVMPSFVSTKAEMTCS 456
+G V + A TK + E PG+ + D PG S + + C
Sbjct: 662 GGITQQIGATNVPLEAINEQTKMIKNFDRENVRIPGMLIIDTPGHESFSNLRNRGSSLCD 721
Query: 457 -GILPIDQMRDHVP 469
IL +D M P
Sbjct: 722 IAILVVDIMHGLEP 735
>gi|4503257 death-domain associated protein isoform a [Homo sapiens]
Length = 740
Score = 40.8 bits (94), Expect = 0.004
Identities = 39/136 (28%), Positives = 59/136 (43%), Gaps = 15/136 (11%)
Query: 251 DSEEEANRDDRQSNTTKFGHSSFDQAEISHSESEH---LPARDSPSLSENPTTDEDDSEY 307
D EE R R++ S D E S E + ++ PS S T DEDD
Sbjct: 384 DKSEEGERKKRRARLQGTSSHSADTPEASLDSGEGPSGMASQGCPSASRAETDDEDD--- 440
Query: 308 EDCPEEEEDDWQTCSEE--DGPKEEDC-----SQDWKESSTADSEARSRKTPQKRQIHNF 360
E+ EEEE++ + EE D +EED Q+ E + EA + K K + +
Sbjct: 441 EESDEEEEEEEEEEEEEATDSEEEEDLEQMQEGQEDDEEEDEEEEAAAGKDGDKSPMSSL 500
Query: 361 SHLVSKQELLELFKEL 376
+S ++ LE K++
Sbjct: 501 Q--ISNEKNLEPGKQI 514
>gi|215422388 death-domain associated protein isoform a [Homo
sapiens]
Length = 740
Score = 40.8 bits (94), Expect = 0.004
Identities = 39/136 (28%), Positives = 59/136 (43%), Gaps = 15/136 (11%)
Query: 251 DSEEEANRDDRQSNTTKFGHSSFDQAEISHSESEH---LPARDSPSLSENPTTDEDDSEY 307
D EE R R++ S D E S E + ++ PS S T DEDD
Sbjct: 384 DKSEEGERKKRRARLQGTSSHSADTPEASLDSGEGPSGMASQGCPSASRAETDDEDD--- 440
Query: 308 EDCPEEEEDDWQTCSEE--DGPKEEDC-----SQDWKESSTADSEARSRKTPQKRQIHNF 360
E+ EEEE++ + EE D +EED Q+ E + EA + K K + +
Sbjct: 441 EESDEEEEEEEEEEEEEATDSEEEEDLEQMQEGQEDDEEEDEEEEAAAGKDGDKSPMSSL 500
Query: 361 SHLVSKQELLELFKEL 376
+S ++ LE K++
Sbjct: 501 Q--ISNEKNLEPGKQI 514
>gi|215422366 death-domain associated protein isoform b [Homo
sapiens]
Length = 752
Score = 40.8 bits (94), Expect = 0.004
Identities = 39/136 (28%), Positives = 59/136 (43%), Gaps = 15/136 (11%)
Query: 251 DSEEEANRDDRQSNTTKFGHSSFDQAEISHSESEH---LPARDSPSLSENPTTDEDDSEY 307
D EE R R++ S D E S E + ++ PS S T DEDD
Sbjct: 396 DKSEEGERKKRRARLQGTSSHSADTPEASLDSGEGPSGMASQGCPSASRAETDDEDD--- 452
Query: 308 EDCPEEEEDDWQTCSEE--DGPKEEDC-----SQDWKESSTADSEARSRKTPQKRQIHNF 360
E+ EEEE++ + EE D +EED Q+ E + EA + K K + +
Sbjct: 453 EESDEEEEEEEEEEEEEATDSEEEEDLEQMQEGQEDDEEEDEEEEAAAGKDGDKSPMSSL 512
Query: 361 SHLVSKQELLELFKEL 376
+S ++ LE K++
Sbjct: 513 Q--ISNEKNLEPGKQI 526
>gi|157738619 smoothelin-like 1 [Homo sapiens]
Length = 512
Score = 40.8 bits (94), Expect = 0.004
Identities = 31/113 (27%), Positives = 55/113 (48%), Gaps = 16/113 (14%)
Query: 251 DSEEEANRDDRQSNTTKFGHSSFD-QAEISHSESEHLPARDSPSLSENPTTDEDDSEYE- 308
D+E E ++D + T G + E + SE + ++S SE +E +++ E
Sbjct: 107 DAEAELKKEDGEKEETTVGSQEMTGRKEETKSEPKEAEEKESTLASEKQKAEEKEAKPES 166
Query: 309 ---------DCPEE----EEDDWQTCSEEDGPKEEDCSQDWKESSTADSEARS 348
D PE EE+D +T S+E+ + ++CS + KE +T D EA++
Sbjct: 167 GQKADANDRDKPEPKATVEEEDAKTASQEETGQRKECSTEPKEKAT-DEEAKA 218
>gi|21361639 DIPB protein [Homo sapiens]
Length = 344
Score = 39.7 bits (91), Expect = 0.009
Identities = 23/73 (31%), Positives = 37/73 (50%), Gaps = 5/73 (6%)
Query: 281 SESEHLPARDSPSLSENPTTDEDDSEYEDCPEEEEDDWQTCSEEDGPKEEDCSQDWKESS 340
SESE + S +E + DE D E E+ EEE +D E++ EED ++ + +
Sbjct: 99 SESEEESESEEESETEEESEDESDEESEEDSEEEMED-----EQESEAEEDNQEEGESEA 153
Query: 341 TADSEARSRKTPQ 353
++EA S P+
Sbjct: 154 EGETEAESEFDPE 166
Score = 33.9 bits (76), Expect = 0.49
Identities = 23/106 (21%), Positives = 48/106 (45%), Gaps = 4/106 (3%)
Query: 250 GDSEEEANRDDRQSNTTKFGHSSFDQAEISHSESEHLPARDSPSLSENPTTDEDDSEYED 309
G E E + + ++ G S + E SESE + S E+ E+DSE E+
Sbjct: 77 GKEEAEVKVEQEREIESEAGEESESEEE---SESEEESETEEESEDESDEESEEDSE-EE 132
Query: 310 CPEEEEDDWQTCSEEDGPKEEDCSQDWKESSTADSEARSRKTPQKR 355
+E+E + + ++E+G E + + + + E + + +++
Sbjct: 133 MEDEQESEAEEDNQEEGESEAEGETEAESEFDPEIEMEAERVAKRK 178
>gi|51477718 TATA box binding protein-associated factor, RNA
polymerase II, Q [Homo sapiens]
Length = 462
Score = 39.7 bits (91), Expect = 0.009
Identities = 36/127 (28%), Positives = 60/127 (47%), Gaps = 15/127 (11%)
Query: 221 QRSAWAMYFEKEDV-----KVIFWSALAGAIPLNGDSEEEANRDDRQSNTTKF----GHS 271
++S++ Y E DV +++ A A + +E+ + Q + F G S
Sbjct: 248 EKSSFTEYIESPDVENEVKRLLRSDAEAVSTRWEVIAEDGTKEIESQGSIPGFLISSGMS 307
Query: 272 SFDQAEISHSESEHLPARDSPSLSENPTTDEDDSEYEDCPEEEEDDWQTCSEEDGPKEED 331
S Q S SE + L S S S N +++D E ED E+E++D E+ +EED
Sbjct: 308 SHKQGHTS-SEYDMLREMFSDSRSNNDDDEDEDDEDEDEDEDEDED-----EDKEEEEED 361
Query: 332 CSQDWKE 338
CS+++ E
Sbjct: 362 CSEEYLE 368
>gi|94681063 bromodomain adjacent to zinc finger domain, 2B [Homo
sapiens]
Length = 2168
Score = 39.3 bits (90), Expect = 0.012
Identities = 23/80 (28%), Positives = 43/80 (53%), Gaps = 8/80 (10%)
Query: 281 SESEHLPARDSPSLSENPTTDEDDSEYEDCPEEEEDDWQTCSEE------DGPKEEDCSQ 334
++S+ ++DS +E+ D+++ + ED ++E DD Q+ S+ +G +EED
Sbjct: 594 TDSDIPSSKDSEDSNEDEEEDDEEEDEEDDEDDESDDSQSESDSNSESDTEGSEEED--D 651
Query: 335 DWKESSTADSEARSRKTPQK 354
D K+ +DS+ KT K
Sbjct: 652 DDKDQDESDSDTEGEKTSMK 671
Score = 32.7 bits (73), Expect = 1.1
Identities = 43/182 (23%), Positives = 70/182 (38%), Gaps = 16/182 (8%)
Query: 247 PLNGDSEEEANRDDRQSNTTKFGHSSFDQAEISHSESEHLPARDSPSLSENPTTDEDDSE 306
PL+ ++ ++ R+ +S D S + SE + + DS L +ED+ E
Sbjct: 221 PLDARVDKIKDKKPRKKAMESSSNSDSDSGTSSDTSSEGISSSDSDDL------EEDEEE 274
Query: 307 YEDCPEE-EEDDWQTCSEEDGPKEEDCSQDWKESSTADSEARSRKTPQKRQIHNFSHLVS 365
+ EE E+DD + SE AD + + K +KR IH L S
Sbjct: 275 EDQSIEESEDDDSDSESEAQHKSNNQVLLHGISDPKADGQKATEKAQEKR-IHQPLPLAS 333
Query: 366 KQELLELFKELHTGRKVKDGQLTVGLVGYPNVGKSSTINTIMGNKKVSVSATPGHTKHFQ 425
+ + F+ +V QL P + +SS NK SV + G + +
Sbjct: 334 ESQ-THSFQSQQKQPQVLSQQL-------PFIFQSSQAKEESVNKHTSVIQSTGLVSNVK 385
Query: 426 TL 427
L
Sbjct: 386 PL 387
Score = 32.3 bits (72), Expect = 1.4
Identities = 31/113 (27%), Positives = 43/113 (38%), Gaps = 6/113 (5%)
Query: 274 DQAEISHSESEHLPARDSPSLSENPTTDEDDSEYEDCPEEEEDDWQTCSEEDGPKEEDCS 333
D E H P R + D+DD + D +E+D+ + E+ K+ D
Sbjct: 1273 DLGEEQHPLGTPTPGRKRRRKGGDSDYDDDDDDDSDDQGDEDDEDEEDKEDKKGKKTDIC 1332
Query: 334 QDWKESSTADSEARSRKTPQKRQIHNFSHLVSKQELLELFKELHTGRKVKDGQ 386
+D E A S K QI S S Q +LF H+ R V GQ
Sbjct: 1333 EDEDEGDQAASVEELEK-----QIEKLSKQQS-QYRRKLFDASHSLRSVMFGQ 1379
Score = 29.6 bits (65), Expect = 9.2
Identities = 28/111 (25%), Positives = 47/111 (42%), Gaps = 12/111 (10%)
Query: 251 DSEEEANRDDRQSNTTKFGHSSFDQAEISHSESEHLPARDSPSLSENPTTDEDDSEYEDC 310
DS+ +++D SN D+ E E E D S++ + +S+ E
Sbjct: 595 DSDIPSSKDSEDSNE--------DEEEDDEEEDEEDDEDDESDDSQSESDSNSESDTEGS 646
Query: 311 PEEEEDDW-QTCSEEDGPKEEDCSQDWKESSTADSEARS---RKTPQKRQI 357
EE++DD Q S+ D E+ + K +S+ S + S TP+ I
Sbjct: 647 EEEDDDDKDQDESDSDTEGEKTSMKLNKTTSSVKSPSMSLTGHSTPRNLHI 697
>gi|115529449 upstream binding transcription factor, RNA polymerase
I isoform b [Homo sapiens]
Length = 727
Score = 38.5 bits (88), Expect = 0.020
Identities = 24/58 (41%), Positives = 30/58 (51%), Gaps = 5/58 (8%)
Query: 293 SLSENPTTDEDDSEYEDCPEEEEDDWQTCSEEDG-----PKEEDCSQDWKESSTADSE 345
S SE+ DE+D + ED EEEEDD S EDG ED S+D E+ D +
Sbjct: 636 SKSESEEDDEEDEDDEDEDEEEEDDENGDSSEDGGDSSESSSEDESEDGDENEEDDED 693
Score = 37.7 bits (86), Expect = 0.034
Identities = 21/57 (36%), Positives = 31/57 (54%)
Query: 292 PSLSENPTTDEDDSEYEDCPEEEEDDWQTCSEEDGPKEEDCSQDWKESSTADSEARS 348
P+ + TT + SE E+ EE+EDD EE+ + D S+D +SS + SE S
Sbjct: 625 PNPKSSRTTLQSKSESEEDDEEDEDDEDEDEEEEDDENGDSSEDGGDSSESSSEDES 681
Score = 37.4 bits (85), Expect = 0.044
Identities = 25/86 (29%), Positives = 39/86 (45%), Gaps = 5/86 (5%)
Query: 251 DSEEEANRD-DRQSNTTKFGHSSFDQAEISHSESEHLPARDSPSLSENPTTDEDDSEYED 309
D E+E + D D + + G SS D + S S SE +S EN DED+ + ED
Sbjct: 644 DEEDEDDEDEDEEEEDDENGDSSEDGGDSSESSSED----ESEDGDENEEDDEDEDDDED 699
Query: 310 CPEEEEDDWQTCSEEDGPKEEDCSQD 335
E+E+++ + S + D
Sbjct: 700 DDEDEDNESEGSSSSSSSSGDSSDSD 725
Score = 36.6 bits (83), Expect = 0.075
Identities = 32/132 (24%), Positives = 55/132 (41%), Gaps = 17/132 (12%)
Query: 217 LTAEQRSAWAMYFEKEDVKVIFWSALAGAIPLNG----DSEEEANRDDRQSNTTKFGHSS 272
L+ + R+A+ Y + + + L G P + S+ E+ DD + +
Sbjct: 600 LSPQDRAAYKEYISNKRKSM---TKLRGPNPKSSRTTLQSKSESEEDDEEDEDDE----- 651
Query: 273 FDQAEISHSESEHLPARDSPSLSENPTTDEDDSEYEDCPEEEEDDWQTCSEEDGPKEEDC 332
D+ E + + D SE+ + DE ED E EEDD +ED ++ED
Sbjct: 652 -DEDEEEEDDENGDSSEDGGDSSESSSEDES----EDGDENEEDDEDEDDDEDDDEDEDN 706
Query: 333 SQDWKESSTADS 344
+ SS++ S
Sbjct: 707 ESEGSSSSSSSS 718
>gi|115529451 upstream binding transcription factor, RNA polymerase
I isoform b [Homo sapiens]
Length = 727
Score = 38.5 bits (88), Expect = 0.020
Identities = 24/58 (41%), Positives = 30/58 (51%), Gaps = 5/58 (8%)
Query: 293 SLSENPTTDEDDSEYEDCPEEEEDDWQTCSEEDG-----PKEEDCSQDWKESSTADSE 345
S SE+ DE+D + ED EEEEDD S EDG ED S+D E+ D +
Sbjct: 636 SKSESEEDDEEDEDDEDEDEEEEDDENGDSSEDGGDSSESSSEDESEDGDENEEDDED 693
Score = 37.7 bits (86), Expect = 0.034
Identities = 21/57 (36%), Positives = 31/57 (54%)
Query: 292 PSLSENPTTDEDDSEYEDCPEEEEDDWQTCSEEDGPKEEDCSQDWKESSTADSEARS 348
P+ + TT + SE E+ EE+EDD EE+ + D S+D +SS + SE S
Sbjct: 625 PNPKSSRTTLQSKSESEEDDEEDEDDEDEDEEEEDDENGDSSEDGGDSSESSSEDES 681
Score = 37.4 bits (85), Expect = 0.044
Identities = 25/86 (29%), Positives = 39/86 (45%), Gaps = 5/86 (5%)
Query: 251 DSEEEANRD-DRQSNTTKFGHSSFDQAEISHSESEHLPARDSPSLSENPTTDEDDSEYED 309
D E+E + D D + + G SS D + S S SE +S EN DED+ + ED
Sbjct: 644 DEEDEDDEDEDEEEEDDENGDSSEDGGDSSESSSED----ESEDGDENEEDDEDEDDDED 699
Query: 310 CPEEEEDDWQTCSEEDGPKEEDCSQD 335
E+E+++ + S + D
Sbjct: 700 DDEDEDNESEGSSSSSSSSGDSSDSD 725
Score = 36.6 bits (83), Expect = 0.075
Identities = 32/132 (24%), Positives = 55/132 (41%), Gaps = 17/132 (12%)
Query: 217 LTAEQRSAWAMYFEKEDVKVIFWSALAGAIPLNG----DSEEEANRDDRQSNTTKFGHSS 272
L+ + R+A+ Y + + + L G P + S+ E+ DD + +
Sbjct: 600 LSPQDRAAYKEYISNKRKSM---TKLRGPNPKSSRTTLQSKSESEEDDEEDEDDE----- 651
Query: 273 FDQAEISHSESEHLPARDSPSLSENPTTDEDDSEYEDCPEEEEDDWQTCSEEDGPKEEDC 332
D+ E + + D SE+ + DE ED E EEDD +ED ++ED
Sbjct: 652 -DEDEEEEDDENGDSSEDGGDSSESSSEDES----EDGDENEEDDEDEDDDEDDDEDEDN 706
Query: 333 SQDWKESSTADS 344
+ SS++ S
Sbjct: 707 ESEGSSSSSSSS 718
>gi|7657671 upstream binding transcription factor, RNA polymerase I
isoform a [Homo sapiens]
Length = 764
Score = 38.5 bits (88), Expect = 0.020
Identities = 24/58 (41%), Positives = 30/58 (51%), Gaps = 5/58 (8%)
Query: 293 SLSENPTTDEDDSEYEDCPEEEEDDWQTCSEEDG-----PKEEDCSQDWKESSTADSE 345
S SE+ DE+D + ED EEEEDD S EDG ED S+D E+ D +
Sbjct: 673 SKSESEEDDEEDEDDEDEDEEEEDDENGDSSEDGGDSSESSSEDESEDGDENEEDDED 730
Score = 37.7 bits (86), Expect = 0.034
Identities = 21/57 (36%), Positives = 31/57 (54%)
Query: 292 PSLSENPTTDEDDSEYEDCPEEEEDDWQTCSEEDGPKEEDCSQDWKESSTADSEARS 348
P+ + TT + SE E+ EE+EDD EE+ + D S+D +SS + SE S
Sbjct: 662 PNPKSSRTTLQSKSESEEDDEEDEDDEDEDEEEEDDENGDSSEDGGDSSESSSEDES 718
Score = 37.4 bits (85), Expect = 0.044
Identities = 25/86 (29%), Positives = 39/86 (45%), Gaps = 5/86 (5%)
Query: 251 DSEEEANRD-DRQSNTTKFGHSSFDQAEISHSESEHLPARDSPSLSENPTTDEDDSEYED 309
D E+E + D D + + G SS D + S S SE +S EN DED+ + ED
Sbjct: 681 DEEDEDDEDEDEEEEDDENGDSSEDGGDSSESSSED----ESEDGDENEEDDEDEDDDED 736
Query: 310 CPEEEEDDWQTCSEEDGPKEEDCSQD 335
E+E+++ + S + D
Sbjct: 737 DDEDEDNESEGSSSSSSSSGDSSDSD 762
Score = 36.6 bits (83), Expect = 0.075
Identities = 32/132 (24%), Positives = 55/132 (41%), Gaps = 17/132 (12%)
Query: 217 LTAEQRSAWAMYFEKEDVKVIFWSALAGAIPLNG----DSEEEANRDDRQSNTTKFGHSS 272
L+ + R+A+ Y + + + L G P + S+ E+ DD + +
Sbjct: 637 LSPQDRAAYKEYISNKRKSM---TKLRGPNPKSSRTTLQSKSESEEDDEEDEDDE----- 688
Query: 273 FDQAEISHSESEHLPARDSPSLSENPTTDEDDSEYEDCPEEEEDDWQTCSEEDGPKEEDC 332
D+ E + + D SE+ + DE ED E EEDD +ED ++ED
Sbjct: 689 -DEDEEEEDDENGDSSEDGGDSSESSSEDES----EDGDENEEDDEDEDDDEDDDEDEDN 743
Query: 333 SQDWKESSTADS 344
+ SS++ S
Sbjct: 744 ESEGSSSSSSSS 755
>gi|146219843 Snf2-related CBP activator protein [Homo sapiens]
Length = 3230
Score = 38.5 bits (88), Expect = 0.020
Identities = 31/103 (30%), Positives = 47/103 (45%), Gaps = 11/103 (10%)
Query: 243 AGAIPLNGDSEEEANRDDRQSNTTKFGHSSFDQAEISHSESEHLPARDSPSLSENPTTDE 302
AGA S E+ + D+ +N++ D E+E P DS S S++ D
Sbjct: 452 AGAYAPGSGSSEDEDEDEVDANSS-------DCEPEGPVEAEEPPQEDSSSQSDS-VEDR 503
Query: 303 DDSEYEDCPEEEEDDWQTCSEEDGPKEEDCSQDWKESSTADSE 345
+ E ++ EEEE + SEE E + S+D + S AD E
Sbjct: 504 SEDEEDEHSEEEETSGSSASEE---SESEESEDAQSQSQADEE 543
Score = 32.0 bits (71), Expect = 1.9
Identities = 16/76 (21%), Positives = 38/76 (50%), Gaps = 2/76 (2%)
Query: 274 DQAEISHSESEHLPARDSPSLSENPTTDEDDSEYEDCPEEEEDDWQTCSEEDGPKEEDCS 333
D+ E+ + S+ P + P +E P ++ S+ + + ED+ SEE+ S
Sbjct: 466 DEDEVDANSSDCEP--EGPVEAEEPPQEDSSSQSDSVEDRSEDEEDEHSEEEETSGSSAS 523
Query: 334 QDWKESSTADSEARSR 349
++ + + D++++S+
Sbjct: 524 EESESEESEDAQSQSQ 539
Score = 31.6 bits (70), Expect = 2.4
Identities = 19/65 (29%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Query: 254 EEANRDDRQSNTTKFGHSSFDQAEISHSESEHLPARDSPSLSENPTTDEDDSEYEDCPEE 313
EE ++D S + S D+ E HSE E + SE+ +++ S+ + EE
Sbjct: 486 EEPPQEDSSSQSDSVEDRSEDE-EDEHSEEEETSGSSASEESESEESEDAQSQSQADEEE 544
Query: 314 EEDDW 318
E+DD+
Sbjct: 545 EDDDF 549
>gi|16445033 ACRC protein [Homo sapiens]
Length = 691
Score = 38.1 bits (87), Expect = 0.026
Identities = 31/106 (29%), Positives = 51/106 (48%), Gaps = 8/106 (7%)
Query: 251 DSEEEANRDDRQSNTTKFGHSSFDQAEISHSESEHLPARDSPSL-SENPTTDEDDSEYED 309
D+ ++++ D +S+ + S D +++ S+ A D S SE P DDSE
Sbjct: 207 DNSDDSDVPDDKSDDSDVPDDSSDDSDVPDDSSDDSEAPDDSSDDSEAPDDSSDDSE--- 263
Query: 310 CPEEEEDDWQT--CSEEDGPKEEDCSQDWKES--STADSEARSRKT 351
P++ DD + S +D +D S D + S S+ DSEA K+
Sbjct: 264 APDDSSDDSEAPDDSSDDSEASDDSSDDSEASDDSSDDSEAPDDKS 309
Score = 34.7 bits (78), Expect = 0.29
Identities = 20/95 (21%), Positives = 40/95 (42%), Gaps = 2/95 (2%)
Query: 257 NRDDRQSNTTKFGHSSFDQAEISHSESEHLPARDSPSLSENPTTDEDDSEYEDCPEEEED 316
+ DD N + + D +E S+ A D S ++ +D+S+ + P++ D
Sbjct: 127 DNDDDNGNDLEVPDDNSDDSEAPDDNSDDSEAPDDNS--DDSEAPDDNSDDSEAPDDNSD 184
Query: 317 DWQTCSEEDGPKEEDCSQDWKESSTADSEARSRKT 351
D + +D S D + ++ DS+ K+
Sbjct: 185 DSDVPDDNSDDSSDDNSDDSSDDNSDDSDVPDDKS 219
Score = 34.3 bits (77), Expect = 0.37
Identities = 23/68 (33%), Positives = 33/68 (48%), Gaps = 4/68 (5%)
Query: 251 DSEEEANRDDRQSNTTKFGHSSFDQAEISHSESEHLPARDSPSL-SENPTTDEDDSEYED 309
DS +++ D S+ ++ S D +E S S+ A D S SE P DDS D
Sbjct: 257 DSSDDSEAPDDSSDDSEAPDDSSDDSEASDDSSDDSEASDDSSDDSEAPDDKSDDS---D 313
Query: 310 CPEEEEDD 317
PE++ DD
Sbjct: 314 VPEDKSDD 321
Score = 33.1 bits (74), Expect = 0.83
Identities = 21/96 (21%), Positives = 43/96 (44%), Gaps = 12/96 (12%)
Query: 251 DSEEEANRDDRQSNTTKFGHSSFDQAEISHSESEHLPARDSPSLSENPTTDEDDSEYEDC 310
D+ +++ D S+ ++ + D +++ S D S + + +D+S+ D
Sbjct: 161 DNSDDSEAPDDNSDDSEAPDDNSDDSDVPDDNS------DDSSDDNSDDSSDDNSDDSDV 214
Query: 311 PEEEEDDWQTCSEEDGPKEEDCSQDWKESSTADSEA 346
P+++ DD D P + D + S+ DSEA
Sbjct: 215 PDDKSDD------SDVPDDSSDDSDVPDDSSDDSEA 244
Score = 32.0 bits (71), Expect = 1.9
Identities = 42/195 (21%), Positives = 76/195 (38%), Gaps = 24/195 (12%)
Query: 251 DSEEEANRDDRQSNTTKFGHSSFDQAEISHSESEHLPA-RDSPSLSENPTTDEDDSEYED 309
DS +++ D S+ ++ S D +E +S+ D S+ P + DD E
Sbjct: 277 DSSDDSEASDDSSDDSEASDDSSDDSEAPDDKSDDSDVPEDKSDDSDVPDDNSDDLEVPV 336
Query: 310 CPEEEEDDWQTCSEED-------GPKEEDCSQDWKESSTADSEARSRKTPQKRQIHNFSH 362
E+ ++ Q S+E+ + D S D E ++ ++ P+ +
Sbjct: 337 PAEDLCNEGQIASDEEELVEAAAAVSQHDSSDDAGEQDLGENLSKPPSDPEANPEVSERK 396
Query: 363 LVSKQELLELFKELHTGRKVKDGQL----------TVGLVGYPNVGKSSTINTIMGNKK- 411
L +++E + E RK K + T +V P ++ T N + +K
Sbjct: 397 LPTEEEPAPVV-EQSGKRKSKTKTIVEPPRKRQTKTKNIVEPPRKRQTKTKNIVEPLRKR 455
Query: 412 ----VSVSATPGHTK 422
+VS TPGH K
Sbjct: 456 KAKTKNVSVTPGHKK 470
Score = 31.6 bits (70), Expect = 2.4
Identities = 23/104 (22%), Positives = 47/104 (45%), Gaps = 8/104 (7%)
Query: 251 DSEEEANRDDRQSNTTKFGHSSFDQAEISHSESEHLPARDSPSLSENPTTD----EDDSE 306
D+ +++ D S+ + + D + +S+ D + ++ + D +D S+
Sbjct: 171 DNSDDSEAPDDNSDDSDVPDDNSDDSSDDNSDDSSDDNSDDSDVPDDKSDDSDVPDDSSD 230
Query: 307 YEDCPEEEEDDWQT--CSEEDGPKEEDCSQDWK--ESSTADSEA 346
D P++ DD + S +D +D S D + + S+ DSEA
Sbjct: 231 DSDVPDDSSDDSEAPDDSSDDSEAPDDSSDDSEAPDDSSDDSEA 274
>gi|4759128 solute carrier family 24 (sodium/potassium/calcium
exchanger), member 1 [Homo sapiens]
Length = 1099
Score = 38.1 bits (87), Expect = 0.026
Identities = 26/107 (24%), Positives = 52/107 (48%), Gaps = 8/107 (7%)
Query: 250 GDSEEEANRDDRQSNTTKFGHSSFDQAEISHSESEHLPARDSPSLSENPTTDEDDSEYED 309
G+ E E + +D + + S + + +H E+++ D + + +D DSE E+
Sbjct: 808 GEDEGEIHAEDGEMKGNEGETESQELSAENHGEAKN----DEKGVEDGGGSDGGDSEEEE 863
Query: 310 CPEEEEDDWQTCSEEDGPKEEDCSQDWKESSTADSEARSRKTPQKRQ 356
EEE+++ EE+ +EE+ ++ +E + E S P+ RQ
Sbjct: 864 EEEEEQEE----EEEEEEQEEEEEEEEEEEEKGNEEPLSLDWPETRQ 906
>gi|221219020 NYD-SP11 protein [Homo sapiens]
Length = 2873
Score = 37.7 bits (86), Expect = 0.034
Identities = 65/308 (21%), Positives = 134/308 (43%), Gaps = 32/308 (10%)
Query: 85 AEARTGLLSFEESQRI-----KKLHEENKQFLCIPRRPNWNQNTTPEELKQAEKDNFLEW 139
+E G L F QRI +KL + +++ I +R + ++ + A+ + L+
Sbjct: 2029 SEIAKGKLEFTRGQRIFVQGQRKLAKASRKL--IKKRESLSK-------EPAKLNKILKA 2079
Query: 140 RRQLVRLEE---EQKLILTPFERNLDFWRQLWRVIERSDIVVQIVD--ARNPLLFRCEDL 194
++L R E ++++ +T +R L F ++ IE+S + ++ D + L + E
Sbjct: 2080 LQKLTRDERKLTQEEIKMTKMKRAL-FVKERRLSIEQSKLDIKEWDFSEKRSELTKDEKK 2138
Query: 195 ECYVKEMDANKENVILINKADLLTAEQ----RSAWAMYFEKEDVKVIFWSALAGAIPLNG 250
+ ANK +INK + +T E+ R + + E+ I + +
Sbjct: 2139 LARKQRKLANKMRR-MINKEEKMTEEESKLARKHSEVILDDEEEGGIEEEEVIPFLKRRW 2197
Query: 251 DSEEEANRDDRQSNTTKFGHSSFDQAEISHSESEHLPARDSPSLSENPTTDEDDSEYEDC 310
+EA R D+ KF S D+ E SE + + + + E++ E E+
Sbjct: 2198 RKRKEAKRGDKPKE--KFS-SQVDEVESEEHFSEEMESLLDELEKQESLSSEEEEEREE- 2253
Query: 311 PEEEEDDWQTCSEEDGPKEEDCSQDWKESSTADSEARSRKTPQKRQIHNFSHLVSKQELL 370
EEE ++ + EE+ KEE+ ++ + + + + +K +K ++ + ++E
Sbjct: 2254 -EEEREEEEVREEEEERKEEEEGEEKQVEKEEEEKKKKKKEKKKEEVQEKEEVFEEKE-- 2310
Query: 371 ELFKELHT 378
E+ E T
Sbjct: 2311 EIMSEEET 2318
Score = 32.3 bits (72), Expect = 1.4
Identities = 43/264 (16%), Positives = 110/264 (41%), Gaps = 20/264 (7%)
Query: 86 EARTGLLSFEESQRIKKLHEENKQFLCIPRR-PNWNQNTTPEELKQAEKDNFLEWRRQLV 144
+++ + ++ S++ +L ++ K+ R+ N + +E K E+++ L + V
Sbjct: 2115 QSKLDIKEWDFSEKRSELTKDEKKLARKQRKLANKMRRMINKEEKMTEEESKLARKHSEV 2174
Query: 145 RLEEEQKLILTPFERNLDFWRQLWRVIERSDIVVQIVDARNPLLFRCEDLECYVKEMDAN 204
L++E++ + E + F ++ WR + + + + + + E E + +EM++
Sbjct: 2175 ILDDEEEGGIEE-EEVIPFLKRRWRKRKEAKRGDKPKEKFSSQVDEVESEEHFSEEMESL 2233
Query: 205 KENVILINKADLLTAEQRSAWAMYFEKEDVKVIFWSALAGAIPLNGDSEEEANRDDRQSN 264
+ + K + L++E+ E+E+ +V EEE R + +
Sbjct: 2234 LDE---LEKQESLSSEEEEEREEEEEREEEEV---------------REEEEERKEEEEG 2275
Query: 265 TTKFGHSSFDQAEISHSESEHLPARDSPSLSENPTTDEDDSEYEDCPEEEEDDWQTCSEE 324
K ++ + E + ++ + E + E E +EEE++ EE
Sbjct: 2276 EEKQVEKEEEEKKKKKKEKKKEEVQEKEEVFEEKEEIMSEEETESLSDEEEEEESCSLEE 2335
Query: 325 DGPKEEDCSQDWKESSTADSEARS 348
+ +E++ + K+ + +S
Sbjct: 2336 EVDREKEILKKEKQFKLQEQRRKS 2359
>gi|32484979 adaptor-related protein complex 3, beta 1 subunit [Homo
sapiens]
Length = 1094
Score = 37.7 bits (86), Expect = 0.034
Identities = 32/115 (27%), Positives = 53/115 (46%), Gaps = 8/115 (6%)
Query: 249 NGDSEEEANRDD-RQSNTTKFGHSSFDQAEISHSESEHLPARDSPSLSENPTTDEDD--- 304
+ DSE E+ + Q + + G S+ D +E S SE + R+S L T +
Sbjct: 689 SSDSESESGSESGEQGESGEEGDSNEDSSEDSSSEQDSESGRES-GLENKRTAKRNSKAK 747
Query: 305 --SEYEDCPEEEEDDWQTCSEEDGPKE-EDCSQDWKESSTADSEARSRKTPQKRQ 356
S+ ED +E E + S D ED S D + S +SE+ SR+ ++++
Sbjct: 748 GKSDSEDGEKENEKSKTSDSSNDESSSIEDSSSDSESESEPESESESRRVTKEKE 802
Score = 31.6 bits (70), Expect = 2.4
Identities = 25/111 (22%), Positives = 48/111 (43%), Gaps = 17/111 (15%)
Query: 250 GDSEEEANRDDRQSNTTKFGHSSF--------------DQAEISHSESEHLPARDSPSLS 295
GDS E+++ D ++ G S +++ E E+ ++ S S +
Sbjct: 710 GDSNEDSSEDSSSEQDSESGRESGLENKRTAKRNSKAKGKSDSEDGEKENEKSKTSDSSN 769
Query: 296 ENPTTDED---DSEYEDCPEEEEDDWQTCSEEDGPKEEDCSQDWKESSTAD 343
+ ++ ED DSE E PE E + + E++ ++D + K+ S D
Sbjct: 770 DESSSIEDSSSDSESESEPESESESRRVTKEKEKKTKQDRTPLTKDVSLLD 820
>gi|217330641 IWS1 homolog [Homo sapiens]
Length = 819
Score = 37.7 bits (86), Expect = 0.034
Identities = 31/101 (30%), Positives = 49/101 (48%), Gaps = 10/101 (9%)
Query: 277 EISHSESEHLPA-RDSPSLSENPTTDE-DDSEYEDCPEEEEDDWQTCSEEDGP----KEE 330
+ S SE+E LP R S S SE+P ++ DSE E+ P+ D ++ + GP + E
Sbjct: 259 QASDSENEELPKPRISDSESEDPPRNQASDSENEELPKPRVSDSESEGPQKGPASDSETE 318
Query: 331 DCSQDWKESSTADSEARSRK----TPQKRQIHNFSHLVSKQ 367
D S+ ++ + D R K Q H+ SH+ K+
Sbjct: 319 DASRHKQKPESDDDSDRENKGEDTEMQNDSFHSDSHMDRKK 359
Score = 30.4 bits (67), Expect = 5.4
Identities = 28/83 (33%), Positives = 42/83 (50%), Gaps = 11/83 (13%)
Query: 277 EISHSESEHLPA-RDSPSLSENPTTDE-DDSEYEDCPEEEEDDWQTCSEEDGPKEEDCSQ 334
+ S SE+E LP R S S SE+P + DSE E+ P+ D ++ ED P+ +
Sbjct: 233 QASDSENEELPKPRISDSESEDPPRHQASDSENEELPKPRISDSES---EDPPRNQASDS 289
Query: 335 DWKE---SSTADSEARSRKTPQK 354
+ +E +DSE+ PQK
Sbjct: 290 ENEELPKPRVSDSESEG---PQK 309
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.315 0.131 0.392
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 28,030,113
Number of Sequences: 37866
Number of extensions: 1368767
Number of successful extensions: 8254
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 103
Number of HSP's successfully gapped in prelim test: 215
Number of HSP's that attempted gapping in prelim test: 6099
Number of HSP's gapped (non-prelim): 1261
length of query: 658
length of database: 18,247,518
effective HSP length: 109
effective length of query: 549
effective length of database: 14,120,124
effective search space: 7751948076
effective search space used: 7751948076
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.