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Search of human proteins with 223029412
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|223029412 otoconin 90 [Homo sapiens]
(477 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|223029412 otoconin 90 [Homo sapiens] 998 0.0
gi|4505845 phospholipase A2, group X [Homo sapiens] 87 3e-17
gi|4505847 phospholipase A2 group IB [Homo sapiens] 76 6e-14
gi|239915991 phospholipase A2, group IIA precursor [Homo sapiens] 74 2e-13
gi|239915987 phospholipase A2, group IIA precursor [Homo sapiens] 74 2e-13
gi|239915985 phospholipase A2, group IIA precursor [Homo sapiens] 74 2e-13
gi|4505849 phospholipase A2, group IIA precursor [Homo sapiens] 74 2e-13
gi|7657461 phospholipase A2, group IIE [Homo sapiens] 72 8e-13
gi|6912596 phospholipase A2, group IID [Homo sapiens] 70 3e-12
gi|145553989 phospholipase A2, group IIF [Homo sapiens] 69 9e-12
gi|4505853 phospholipase A2, group V precursor [Homo sapiens] 59 7e-09
gi|157743243 phospholipase A2, group IIC [Homo sapiens] 42 0.001
gi|66346695 fibrillin 2 precursor [Homo sapiens] 35 0.11
gi|4507205 serum response factor (c-fos serum response element-b... 35 0.11
gi|4503649 coagulation factor IX preproprotein [Homo sapiens] 34 0.26
gi|126723390 ankyrin repeat domain 24 [Homo sapiens] 34 0.26
gi|188528675 slit homolog 1 [Homo sapiens] 34 0.33
gi|56237021 fibrillin 3 precursor [Homo sapiens] 33 0.74
gi|239749157 PREDICTED: hypothetical protein XP_002346930 [Homo ... 32 0.97
gi|239743220 PREDICTED: hypothetical protein XP_002342806 [Homo ... 32 0.97
gi|239508892 PREDICTED: hypothetical protein [Homo sapiens] 32 0.97
gi|6912230 adenosine deaminase, tRNA-specific 1 [Homo sapiens] 32 1.7
gi|49574498 hypothetical protein LOC118461 isoform 2 [Homo sapiens] 31 2.2
gi|206597543 hypothetical protein LOC118461 isoform 1 [Homo sapi... 31 2.2
gi|239751105 PREDICTED: hypothetical protein XP_002347705 [Homo ... 31 2.8
gi|5729945 nuclear factor of activated T-cells 5 isoform c [Homo... 31 2.8
gi|208973262 low density lipoprotein-related protein 12 isoform ... 31 2.8
gi|7305525 low density lipoprotein-related protein 12 isoform a ... 31 2.8
gi|188528648 tenascin XB isoform 1 precursor [Homo sapiens] 30 3.7
gi|12232423 inositol 1,3,4,5,6-pentakisphosphate 2-kinase [Homo ... 30 3.7
>gi|223029412 otoconin 90 [Homo sapiens]
Length = 477
Score = 998 bits (2581), Expect = 0.0
Identities = 477/477 (100%), Positives = 477/477 (100%)
Query: 1 MIAFLLTSVLMIPHAGGHPLDTPHLPQELPPGLPNNINITFFSGMFKNVESVAEIFDCLG 60
MIAFLLTSVLMIPHAGGHPLDTPHLPQELPPGLPNNINITFFSGMFKNVESVAEIFDCLG
Sbjct: 1 MIAFLLTSVLMIPHAGGHPLDTPHLPQELPPGLPNNINITFFSGMFKNVESVAEIFDCLG 60
Query: 61 PHFTWLQAVFTNFPVLIQFVNGMKCVAGLCPRDFEDYGCTCRFEMEGLPVDESDSCCFQH 120
PHFTWLQAVFTNFPVLIQFVNGMKCVAGLCPRDFEDYGCTCRFEMEGLPVDESDSCCFQH
Sbjct: 61 PHFTWLQAVFTNFPVLIQFVNGMKCVAGLCPRDFEDYGCTCRFEMEGLPVDESDSCCFQH 120
Query: 121 RRCYEEAAEMDCLQDPAKLSTEVNCVSKKIICESKDNCEHLLCTCDKAAIECLARSSLNS 180
RRCYEEAAEMDCLQDPAKLSTEVNCVSKKIICESKDNCEHLLCTCDKAAIECLARSSLNS
Sbjct: 121 RRCYEEAAEMDCLQDPAKLSTEVNCVSKKIICESKDNCEHLLCTCDKAAIECLARSSLNS 180
Query: 181 SLNLLDTSFCLAQTPETTIKEDLTTLLPRVVPVEPTDTSLTALSGEEAGHDQEGVGAARA 240
SLNLLDTSFCLAQTPETTIKEDLTTLLPRVVPVEPTDTSLTALSGEEAGHDQEGVGAARA
Sbjct: 181 SLNLLDTSFCLAQTPETTIKEDLTTLLPRVVPVEPTDTSLTALSGEEAGHDQEGVGAARA 240
Query: 241 TSPPGSAEIVATRVTAKIVTLVPAGIKSLGLAVSSVENDPEETTEKACDRFTFLHLGSGD 300
TSPPGSAEIVATRVTAKIVTLVPAGIKSLGLAVSSVENDPEETTEKACDRFTFLHLGSGD
Sbjct: 241 TSPPGSAEIVATRVTAKIVTLVPAGIKSLGLAVSSVENDPEETTEKACDRFTFLHLGSGD 300
Query: 301 NMQVMPQLGEMLFCLTSRCPEEFESYGCYCGQEGRGEPRDDLDRCCLSHHCCLEQVRRLG 360
NMQVMPQLGEMLFCLTSRCPEEFESYGCYCGQEGRGEPRDDLDRCCLSHHCCLEQVRRLG
Sbjct: 301 NMQVMPQLGEMLFCLTSRCPEEFESYGCYCGQEGRGEPRDDLDRCCLSHHCCLEQVRRLG 360
Query: 361 CLLERLPWSPVVCVDHTPKCGGQSLCEKLLCACDQTAAECMTSASFNQSLKSPSRLGCPG 420
CLLERLPWSPVVCVDHTPKCGGQSLCEKLLCACDQTAAECMTSASFNQSLKSPSRLGCPG
Sbjct: 361 CLLERLPWSPVVCVDHTPKCGGQSLCEKLLCACDQTAAECMTSASFNQSLKSPSRLGCPG 420
Query: 421 QPAACEDSLHPVPAAPTLGSSSEEDSEEDPPQEDLGRAKRFLRKSLGPLGIGPLHGR 477
QPAACEDSLHPVPAAPTLGSSSEEDSEEDPPQEDLGRAKRFLRKSLGPLGIGPLHGR
Sbjct: 421 QPAACEDSLHPVPAAPTLGSSSEEDSEEDPPQEDLGRAKRFLRKSLGPLGIGPLHGR 477
>gi|4505845 phospholipase A2, group X [Homo sapiens]
Length = 165
Score = 87.4 bits (215), Expect = 3e-17
Identities = 42/121 (34%), Positives = 62/121 (51%), Gaps = 13/121 (10%)
Query: 297 GSGDNMQVMP-------QLGEMLFCLTSRCPEEFESYGCYCGQEGRGEPRDDLDRCCLSH 349
GSG+ +++ +L + C+ R P + YGC+CG G G+PRD +D CC H
Sbjct: 29 GSGEASRILRVHRRGILELAGTVGCVGPRTPIAYMKYGCFCGLGGHGQPRDAIDWCCHGH 88
Query: 350 HCCLEQVRRLGC--LLERLPWSPVVCVDHTPKCG-GQSLCEKLLCACDQTAAECMTSASF 406
CC + GC ER W CV+ + CG ++ C++LLC CDQ A C+ +
Sbjct: 89 DCCYTRAEEAGCSPKTERYSWQ---CVNQSVLCGPAENKCQELLCKCDQEIANCLAQTEY 145
Query: 407 N 407
N
Sbjct: 146 N 146
Score = 70.5 bits (171), Expect = 3e-12
Identities = 36/122 (29%), Positives = 54/122 (44%), Gaps = 3/122 (2%)
Query: 76 LIQFVNGMKCVAGLCPRDFEDYGCTCRFEMEGLPVDESDSCCFQHRRCYEEAAEMDCLQD 135
+++ + CV P + YGC C G P D D CC H CY A E C
Sbjct: 44 ILELAGTVGCVGPRTPIAYMKYGCFCGLGGHGQPRDAIDWCCHGHDCCYTRAEEAGCSPK 103
Query: 136 PAKLSTEVNCVSKKIICESKDN-CEHLLCTCDKAAIECLARSSLNSSLNLLDTSFCLAQT 194
+ S + CV++ ++C +N C+ LLC CD+ CLA++ N C +
Sbjct: 104 TERYSWQ--CVNQSVLCGPAENKCQELLCKCDQEIANCLAQTEYNLKYLFYPQFLCEPDS 161
Query: 195 PE 196
P+
Sbjct: 162 PK 163
>gi|4505847 phospholipase A2 group IB [Homo sapiens]
Length = 148
Score = 76.3 bits (186), Expect = 6e-14
Identities = 42/117 (35%), Positives = 60/117 (51%), Gaps = 7/117 (5%)
Query: 78 QFVNGMKCVA-GLCP-RDFEDYGCTCRFEMEGLPVDESDSCCFQHRRCYEEAAEMD---- 131
QF +KCV G P ++ +YGC C G PVDE D CC H CY++A ++D
Sbjct: 26 QFRKMIKCVIPGSDPFLEYNNYGCYCGLGGSGTPVDELDKCCQTHDNCYDQAKKLDSCKF 85
Query: 132 CLQDPAKLSTEVNCVSKKIICESKD-NCEHLLCTCDKAAIECLARSSLNSSLNLLDT 187
L +P + +C I C SK+ CE +C CD+ A C +++ N + LDT
Sbjct: 86 LLDNPYTHTYSYSCSGSAITCSSKNKECEAFICNCDRNAAICFSKAPYNKAHKNLDT 142
Score = 71.2 bits (173), Expect = 2e-12
Identities = 40/128 (31%), Positives = 68/128 (53%), Gaps = 18/128 (14%)
Query: 298 SGDNMQVMPQLGEMLFCLTSRCPE--EFESYGCYCGQEGRGEPRDDLDRCCLSHHCCLEQ 355
SG + + + Q +M+ C+ E+ +YGCYCG G G P D+LD+CC +H C +Q
Sbjct: 17 SGISPRAVWQFRKMIKCVIPGSDPFLEYNNYGCYCGLGGSGTPVDELDKCCQTHDNCYDQ 76
Query: 356 VRRLGC---LLERLPWSPVVCVDHTPKCGGQSL--------CEKLLCACDQTAAECMTSA 404
++L LL+ P++ ++ C G ++ CE +C CD+ AA C + A
Sbjct: 77 AKKLDSCKFLLDN-PYTHT----YSYSCSGSAITCSSKNKECEAFICNCDRNAAICFSKA 131
Query: 405 SFNQSLKS 412
+N++ K+
Sbjct: 132 PYNKAHKN 139
>gi|239915991 phospholipase A2, group IIA precursor [Homo sapiens]
Length = 144
Score = 74.3 bits (181), Expect = 2e-13
Identities = 35/102 (34%), Positives = 50/102 (49%), Gaps = 3/102 (2%)
Query: 326 YGCYCGQEGRGEPRDDLDRCCLSHHCCLEQVRRLGCLLERLPWSPVVCVDHTPKCGGQSL 385
YGC+CG GRG P+D DRCC++H CC +++ + GC + L + C Q
Sbjct: 44 YGCHCGVGGRGSPKDATDRCCVTHDCCYKRLEKRGCGTKFLSYK-FSNSGSRITCAKQDS 102
Query: 386 CEKLLCACDQTAAECM--TSASFNQSLKSPSRLGCPGQPAAC 425
C LC CD+ AA C ++N+ + S C G C
Sbjct: 103 CRSQLCECDKAAATCFARNKTTYNKKYQYYSNKHCRGSTPRC 144
Score = 65.9 bits (159), Expect = 8e-11
Identities = 38/126 (30%), Positives = 52/126 (41%), Gaps = 9/126 (7%)
Query: 72 NFPVLIQFVNGMKCVAGLCPRDFEDYGCTCRFEMEGLPVDESDSCCFQHRRCYEEAAEMD 131
NF +I+ G + + YGC C G P D +D CC H CY+ +
Sbjct: 24 NFHRMIKLTTGKEAALS-----YGFYGCHCGVGGRGSPKDATDRCCVTHDCCYKRLEKRG 78
Query: 132 CLQDPAKLSTEVNCVSKKIICESKDNCEHLLCTCDKAAIECLAR--SSLNSSLNLLDTSF 189
C LS + + +I C +D+C LC CDKAA C AR ++ N
Sbjct: 79 C--GTKFLSYKFSNSGSRITCAKQDSCRSQLCECDKAAATCFARNKTTYNKKYQYYSNKH 136
Query: 190 CLAQTP 195
C TP
Sbjct: 137 CRGSTP 142
>gi|239915987 phospholipase A2, group IIA precursor [Homo sapiens]
Length = 144
Score = 74.3 bits (181), Expect = 2e-13
Identities = 35/102 (34%), Positives = 50/102 (49%), Gaps = 3/102 (2%)
Query: 326 YGCYCGQEGRGEPRDDLDRCCLSHHCCLEQVRRLGCLLERLPWSPVVCVDHTPKCGGQSL 385
YGC+CG GRG P+D DRCC++H CC +++ + GC + L + C Q
Sbjct: 44 YGCHCGVGGRGSPKDATDRCCVTHDCCYKRLEKRGCGTKFLSYK-FSNSGSRITCAKQDS 102
Query: 386 CEKLLCACDQTAAECM--TSASFNQSLKSPSRLGCPGQPAAC 425
C LC CD+ AA C ++N+ + S C G C
Sbjct: 103 CRSQLCECDKAAATCFARNKTTYNKKYQYYSNKHCRGSTPRC 144
Score = 65.9 bits (159), Expect = 8e-11
Identities = 38/126 (30%), Positives = 52/126 (41%), Gaps = 9/126 (7%)
Query: 72 NFPVLIQFVNGMKCVAGLCPRDFEDYGCTCRFEMEGLPVDESDSCCFQHRRCYEEAAEMD 131
NF +I+ G + + YGC C G P D +D CC H CY+ +
Sbjct: 24 NFHRMIKLTTGKEAALS-----YGFYGCHCGVGGRGSPKDATDRCCVTHDCCYKRLEKRG 78
Query: 132 CLQDPAKLSTEVNCVSKKIICESKDNCEHLLCTCDKAAIECLAR--SSLNSSLNLLDTSF 189
C LS + + +I C +D+C LC CDKAA C AR ++ N
Sbjct: 79 C--GTKFLSYKFSNSGSRITCAKQDSCRSQLCECDKAAATCFARNKTTYNKKYQYYSNKH 136
Query: 190 CLAQTP 195
C TP
Sbjct: 137 CRGSTP 142
>gi|239915985 phospholipase A2, group IIA precursor [Homo sapiens]
Length = 144
Score = 74.3 bits (181), Expect = 2e-13
Identities = 35/102 (34%), Positives = 50/102 (49%), Gaps = 3/102 (2%)
Query: 326 YGCYCGQEGRGEPRDDLDRCCLSHHCCLEQVRRLGCLLERLPWSPVVCVDHTPKCGGQSL 385
YGC+CG GRG P+D DRCC++H CC +++ + GC + L + C Q
Sbjct: 44 YGCHCGVGGRGSPKDATDRCCVTHDCCYKRLEKRGCGTKFLSYK-FSNSGSRITCAKQDS 102
Query: 386 CEKLLCACDQTAAECM--TSASFNQSLKSPSRLGCPGQPAAC 425
C LC CD+ AA C ++N+ + S C G C
Sbjct: 103 CRSQLCECDKAAATCFARNKTTYNKKYQYYSNKHCRGSTPRC 144
Score = 65.9 bits (159), Expect = 8e-11
Identities = 38/126 (30%), Positives = 52/126 (41%), Gaps = 9/126 (7%)
Query: 72 NFPVLIQFVNGMKCVAGLCPRDFEDYGCTCRFEMEGLPVDESDSCCFQHRRCYEEAAEMD 131
NF +I+ G + + YGC C G P D +D CC H CY+ +
Sbjct: 24 NFHRMIKLTTGKEAALS-----YGFYGCHCGVGGRGSPKDATDRCCVTHDCCYKRLEKRG 78
Query: 132 CLQDPAKLSTEVNCVSKKIICESKDNCEHLLCTCDKAAIECLAR--SSLNSSLNLLDTSF 189
C LS + + +I C +D+C LC CDKAA C AR ++ N
Sbjct: 79 C--GTKFLSYKFSNSGSRITCAKQDSCRSQLCECDKAAATCFARNKTTYNKKYQYYSNKH 136
Query: 190 CLAQTP 195
C TP
Sbjct: 137 CRGSTP 142
>gi|4505849 phospholipase A2, group IIA precursor [Homo sapiens]
Length = 144
Score = 74.3 bits (181), Expect = 2e-13
Identities = 35/102 (34%), Positives = 50/102 (49%), Gaps = 3/102 (2%)
Query: 326 YGCYCGQEGRGEPRDDLDRCCLSHHCCLEQVRRLGCLLERLPWSPVVCVDHTPKCGGQSL 385
YGC+CG GRG P+D DRCC++H CC +++ + GC + L + C Q
Sbjct: 44 YGCHCGVGGRGSPKDATDRCCVTHDCCYKRLEKRGCGTKFLSYK-FSNSGSRITCAKQDS 102
Query: 386 CEKLLCACDQTAAECM--TSASFNQSLKSPSRLGCPGQPAAC 425
C LC CD+ AA C ++N+ + S C G C
Sbjct: 103 CRSQLCECDKAAATCFARNKTTYNKKYQYYSNKHCRGSTPRC 144
Score = 65.9 bits (159), Expect = 8e-11
Identities = 38/126 (30%), Positives = 52/126 (41%), Gaps = 9/126 (7%)
Query: 72 NFPVLIQFVNGMKCVAGLCPRDFEDYGCTCRFEMEGLPVDESDSCCFQHRRCYEEAAEMD 131
NF +I+ G + + YGC C G P D +D CC H CY+ +
Sbjct: 24 NFHRMIKLTTGKEAALS-----YGFYGCHCGVGGRGSPKDATDRCCVTHDCCYKRLEKRG 78
Query: 132 CLQDPAKLSTEVNCVSKKIICESKDNCEHLLCTCDKAAIECLAR--SSLNSSLNLLDTSF 189
C LS + + +I C +D+C LC CDKAA C AR ++ N
Sbjct: 79 C--GTKFLSYKFSNSGSRITCAKQDSCRSQLCECDKAAATCFARNKTTYNKKYQYYSNKH 136
Query: 190 CLAQTP 195
C TP
Sbjct: 137 CRGSTP 142
>gi|7657461 phospholipase A2, group IIE [Homo sapiens]
Length = 142
Score = 72.4 bits (176), Expect = 8e-13
Identities = 39/123 (31%), Positives = 59/123 (47%), Gaps = 7/123 (5%)
Query: 307 QLGEMLFCLTSRCPEEFESYGCYCGQEGRGEPRDDLDRCCLSHHCCLEQVRRLGC--LLE 364
Q G M+ +T + ++ YGCYCG G P D D CC +H CC ++ +LGC LE
Sbjct: 23 QFGVMIEKMTGKSALQYNDYGCYCGIGGSHWPVDQTDWCCHAHDCCYGRLEKLGCEPKLE 82
Query: 365 RLPWSPVVCVDHTPKCGGQSLCEKLLCACDQTAAECM--TSASFNQSLKSPSRLGCPGQP 422
+ +S + C G++ C++L C CD+ AA C ++N+ C G
Sbjct: 83 KYLFS---VSERGIFCAGRTTCQRLTCECDKRAALCFRRNLGTYNRKYAHYPNKLCTGPT 139
Query: 423 AAC 425
C
Sbjct: 140 PPC 142
Score = 65.5 bits (158), Expect = 1e-10
Identities = 38/123 (30%), Positives = 54/123 (43%), Gaps = 6/123 (4%)
Query: 76 LIQFVNGMKCVAGLCPRDFEDYGCTCRFEMEGLPVDESDSCCFQHRRCYEEAAEMDCLQD 135
L+QF ++ + G + DYGC C PVD++D CC H CY ++ C
Sbjct: 21 LVQFGVMIEKMTGKSALQYNDYGCYCGIGGSHWPVDQTDWCCHAHDCCYGRLEKLGC--- 77
Query: 136 PAKLSTEVNCVSKK-IICESKDNCEHLLCTCDKAAIECLARS--SLNSSLNLLDTSFCLA 192
KL + VS++ I C + C+ L C CDK A C R+ + N C
Sbjct: 78 EPKLEKYLFSVSERGIFCAGRTTCQRLTCECDKRAALCFRRNLGTYNRKYAHYPNKLCTG 137
Query: 193 QTP 195
TP
Sbjct: 138 PTP 140
>gi|6912596 phospholipase A2, group IID [Homo sapiens]
Length = 145
Score = 70.5 bits (171), Expect = 3e-12
Identities = 38/121 (31%), Positives = 61/121 (50%), Gaps = 3/121 (2%)
Query: 308 LGEMLFCLTSRCPE-EFESYGCYCGQEGRGEPRDDLDRCCLSHHCCLEQVRRLGCLLERL 366
L +M+ +T + P + YGC+CG GRG+P+D D CC +H CC + ++ GC + +
Sbjct: 25 LNKMVKQVTGKMPILSYWPYGCHCGLGGRGQPKDATDWCCQTHDCCYDHLKTQGCSIYKD 84
Query: 367 PWSPVVCVDHTPKCGGQSLCEKLLCACDQTAAECM--TSASFNQSLKSPSRLGCPGQPAA 424
+ + S CE+ LCACD+ A C+ ++ + L+ R C GQ
Sbjct: 85 YYRYNFSQGNIHCSDKGSWCEQQLCACDKEVAFCLKRNLDTYQKRLRFYWRPHCRGQTPG 144
Query: 425 C 425
C
Sbjct: 145 C 145
Score = 53.9 bits (128), Expect = 3e-07
Identities = 39/133 (29%), Positives = 49/133 (36%), Gaps = 10/133 (7%)
Query: 66 LQAVFTNFPVLIQFVNGMKCVAGLCPRDFEDYGCTCRFEMEGLPVDESDSCCFQHRRCYE 125
+Q N +++ V G + P YGC C G P D +D CC H CY+
Sbjct: 18 IQGGILNLNKMVKQVTGKMPILSYWP-----YGCHCGLGGRGQPKDATDWCCQTHDCCYD 72
Query: 126 EAAEMDCLQDPAKLSTEVNCVSKKIICESKDN-CEHLLCTCDKAAIECLARS--SLNSSL 182
C K N I C K + CE LC CDK CL R+ + L
Sbjct: 73 HLKTQGC--SIYKDYYRYNFSQGNIHCSDKGSWCEQQLCACDKEVAFCLKRNLDTYQKRL 130
Query: 183 NLLDTSFCLAQTP 195
C QTP
Sbjct: 131 RFYWRPHCRGQTP 143
>gi|145553989 phospholipase A2, group IIF [Homo sapiens]
Length = 211
Score = 68.9 bits (167), Expect = 9e-12
Identities = 33/112 (29%), Positives = 55/112 (49%), Gaps = 16/112 (14%)
Query: 323 FESYGCYCGQEGRGEPRDDLDRCCLSHHCCLEQVRRLGC---------LLERLPWSPVVC 373
F YGCYCG GRG+P+D++D CC +H CC +++ GC +E + +VC
Sbjct: 84 FVGYGCYCGLGGRGQPKDEVDWCCHAHDCCYQELFDQGCHPYVDHYDHTIENN--TEIVC 141
Query: 374 VDHTPKCGGQSLCEKLLCACDQTAAECMTSASFNQSLKSPSRLGCPGQPAAC 425
D ++ C+K C CD+ C+ + ++ + + + C G C
Sbjct: 142 SDL-----NKTECDKQTCMCDKNMVLCLMNQTYREEYRGFLNVYCQGPTPNC 188
Score = 60.5 bits (145), Expect = 3e-09
Identities = 38/134 (28%), Positives = 53/134 (39%), Gaps = 12/134 (8%)
Query: 72 NFPVLIQFVNGMKCVAGLCPRDFEDYGCTCRFEMEGLPVDESDSCCFQHRRCYEEAAEMD 131
N +++ V G + F YGC C G P DE D CC H CY+E +
Sbjct: 67 NLKAMVEAVTGRSAILS-----FVGYGCYCGLGGRGQPKDEVDWCCHAHDCCYQELFDQG 121
Query: 132 C--LQDPAKLSTEVNCVSKKIICE--SKDNCEHLLCTCDKAAIECLARSSLNSSLNLLDT 187
C D + E N +I+C +K C+ C CDK + CL +
Sbjct: 122 CHPYVDHYDHTIENN---TEIVCSDLNKTECDKQTCMCDKNMVLCLMNQTYREEYRGFLN 178
Query: 188 SFCLAQTPETTIKE 201
+C TP +I E
Sbjct: 179 VYCQGPTPNCSIYE 192
>gi|4505853 phospholipase A2, group V precursor [Homo sapiens]
Length = 138
Score = 59.3 bits (142), Expect = 7e-09
Identities = 29/82 (35%), Positives = 36/82 (43%), Gaps = 13/82 (15%)
Query: 326 YGCYCGQEGRGEPRDDLDRCCLSHHCCLEQVRRLGCLLE------RLPWSPVVCVDHTPK 379
YGCYCG GRG P+D D CC +H C ++ GC + R W V C
Sbjct: 44 YGCYCGWGGRGTPKDGTDWCCWAHDHCYGRLEEKGCNIRTQSYKYRFAWGVVTCEP---- 99
Query: 380 CGGQSLCEKLLCACDQTAAECM 401
C LCACD+ C+
Sbjct: 100 ---GPFCHVNLCACDRKLVYCL 118
Score = 51.6 bits (122), Expect = 2e-06
Identities = 26/80 (32%), Positives = 35/80 (43%), Gaps = 2/80 (2%)
Query: 97 YGCTCRFEMEGLPVDESDSCCFQHRRCYEEAAEMDCLQDPAKLSTEVNCVSKKIICESKD 156
YGC C + G P D +D CC+ H CY E C + S + + CE
Sbjct: 44 YGCYCGWGGRGTPKDGTDWCCWAHDHCYGRLEEKGC--NIRTQSYKYRFAWGVVTCEPGP 101
Query: 157 NCEHLLCTCDKAAIECLARS 176
C LC CD+ + CL R+
Sbjct: 102 FCHVNLCACDRKLVYCLKRN 121
>gi|157743243 phospholipase A2, group IIC [Homo sapiens]
Length = 150
Score = 42.4 bits (98), Expect = 0.001
Identities = 25/86 (29%), Positives = 39/86 (45%), Gaps = 10/86 (11%)
Query: 97 YGCTCRFEMEGLPVDESDSCCFQHRRCYEEAAEMDCLQDPAKLSTEVNCVSKKIIC---- 152
YGC C +G+PVD++DS YE+ E C P S + + V+ ++C
Sbjct: 45 YGCYCGLGDKGIPVDDTDSP--SSPSPYEKLKEFSC--QPVLNSYQFHIVNGAVVCGCTL 100
Query: 153 --ESKDNCEHLLCTCDKAAIECLARS 176
+ +C C CDK ++ C S
Sbjct: 101 GPGASCHCRLKACECDKQSVHCFKES 126
Score = 33.1 bits (74), Expect = 0.57
Identities = 25/84 (29%), Positives = 34/84 (40%), Gaps = 9/84 (10%)
Query: 323 FESYGCYCGQEGRGEPRDDLDRCCLSHHCCLEQVRRLGC--LLERLPW----SPVVCVDH 376
+ YGCYCG +G P DD D S E+++ C +L + VVC
Sbjct: 42 YYGYGCYCGLGDKGIPVDDTD--SPSSPSPYEKLKEFSCQPVLNSYQFHIVNGAVVC-GC 98
Query: 377 TPKCGGQSLCEKLLCACDQTAAEC 400
T G C C CD+ + C
Sbjct: 99 TLGPGASCHCRLKACECDKQSVHC 122
>gi|66346695 fibrillin 2 precursor [Homo sapiens]
Length = 2912
Score = 35.4 bits (80), Expect = 0.11
Identities = 28/121 (23%), Positives = 44/121 (36%), Gaps = 20/121 (16%)
Query: 85 CVAGLCPRDFEDYGCTCR--FEMEGLPV--DESDSCCFQHRRCYEEAAEMDCLQDPA--- 137
C G+C + C C F L + ++ D C C A DC+ P
Sbjct: 1819 CANGVCINQIGSFRCECPTGFSYNDLLLVCEDIDECSNGDNLCQRNA---DCINSPGSYR 1875
Query: 138 -------KLSTEVNCVSKKIICESKDNCEHLLCTCDKAAIECLARSSLNSSLNLLDTSFC 190
KLS CV + E + C H LC + + +C+ + +S D + C
Sbjct: 1876 CECAAGFKLSPNGACVDRNECLEIPNVCSHGLCVDLQGSYQCICHNGFKAS---QDQTMC 1932
Query: 191 L 191
+
Sbjct: 1933 M 1933
>gi|4507205 serum response factor (c-fos serum response
element-binding transcription factor) [Homo sapiens]
Length = 508
Score = 35.4 bits (80), Expect = 0.11
Identities = 22/54 (40%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Query: 423 AACEDSLHPVPAAPTLGSSSEEDSEEDPPQEDLGRAKRFLRKSLGPLGIGPLHG 476
AA + P P A L S SE DSE +E+LG +R L++SL + IG + G
Sbjct: 60 AAAAAATTPAPTAGALYSGSEGDSESG-EEEELGAERRGLKRSLSEMEIGMVVG 112
>gi|4503649 coagulation factor IX preproprotein [Homo sapiens]
Length = 461
Score = 34.3 bits (77), Expect = 0.26
Identities = 23/88 (26%), Positives = 38/88 (43%), Gaps = 12/88 (13%)
Query: 78 QFVNGMKCVA------GLCPRDFEDYGCTCRFEMEGLPVDESDSCCFQHRRCYEEAAEMD 131
Q+V+G +C + G C D Y C C F EG + +C ++ RC E
Sbjct: 90 QYVDGDQCESNPCLNGGSCKDDINSYECWCPFGFEGKNCELDVTCNIKNGRC-----EQF 144
Query: 132 CLQDPAKLSTEVNCVSKKIICESKDNCE 159
C ++ A +C + E++ +CE
Sbjct: 145 C-KNSADNKVVCSCTEGYRLAENQKSCE 171
>gi|126723390 ankyrin repeat domain 24 [Homo sapiens]
Length = 1146
Score = 34.3 bits (77), Expect = 0.26
Identities = 27/89 (30%), Positives = 37/89 (41%), Gaps = 8/89 (8%)
Query: 213 VEPTDTSLTALSGEEAGHDQEGVGAARATSP-PGSAEIVATRVTAKIVTLVPAGIKSLGL 271
VE T EEA GVGA +A P G+ + AT A G++S G+
Sbjct: 635 VEAMGVEATKTKAEEAEMQAYGVGAGQAEPPVTGTTNMEATGSRA-------TGMESTGV 687
Query: 272 AVSSVENDPEETTEKACDRFTFLHLGSGD 300
+ + VEN E T LH G+ +
Sbjct: 688 SATGVENPGVEATVPGISAGPILHPGAAE 716
>gi|188528675 slit homolog 1 [Homo sapiens]
Length = 1534
Score = 33.9 bits (76), Expect = 0.33
Identities = 25/100 (25%), Positives = 37/100 (37%), Gaps = 13/100 (13%)
Query: 319 CPEEFESYGCYCGQEGRGEPRDDLDRCCLSHHCCLEQVRRLGCLLERLPWSPVVCVDHTP 378
C F C E RG+P D + + C Q R P+ V+
Sbjct: 1444 CDPGFSGELCEQESECRGDPVRDFHQVQRGYAIC--QTTR-----------PLSWVECRG 1490
Query: 379 KCGGQSLCEKLLCACDQTAAECMTSASFNQSLKSPSRLGC 418
C GQ C+ L + EC SF + ++ P++ GC
Sbjct: 1491 SCPGQGCCQGLRLKRRKFTFECSDGTSFAEEVEKPTKCGC 1530
>gi|56237021 fibrillin 3 precursor [Homo sapiens]
Length = 2809
Score = 32.7 bits (73), Expect = 0.74
Identities = 27/121 (22%), Positives = 42/121 (34%), Gaps = 20/121 (16%)
Query: 85 CVAGLCPRDFEDYGCTC----RFEMEGLPVDESDSCCFQHRRCYEEAAEMDCLQDPA--- 137
C G+C + C C + L ++ D C + C + A DC+ P
Sbjct: 1732 CANGICINQIGSFRCECPAGFNYNSILLACEDVDECGSRESPCQQNA---DCINIPGSYR 1788
Query: 138 -------KLSTEVNCVSKKIICESKDNCEHLLCTCDKAAIECLARSSLNSSLNLLDTSFC 190
KLS CV + E + C H C + + CL +S D + C
Sbjct: 1789 CKCTRGYKLSPGGACVGRNECREIPNVCSHGDCMDTEGSYMCLCHRGFQAS---ADQTLC 1845
Query: 191 L 191
+
Sbjct: 1846 M 1846
Score = 30.8 bits (68), Expect = 2.8
Identities = 41/156 (26%), Positives = 53/156 (33%), Gaps = 32/156 (20%)
Query: 265 GIKSLGLAVSSVENDPEETTEKACDRFTFLHLGSGDNMQVMPQLGEMLFCLTSRCPEEFE 324
GI SLG S++ T C FT L CL RC
Sbjct: 389 GIPSLGPGNSNIGTATLNQTIDICRHFTNL-------------------CLNGRCLPTPS 429
Query: 325 SYGCYCG----QEGRGEPRDDLDRCCLS---HHCCLEQVRRLGCL----LERLPWSPVVC 373
SY C C Q+ RGE D+D C S H C+ C + P + C
Sbjct: 430 SYRCECNVGYTQDVRGE-CIDVDECTSSPCHHGDCVNIPGTYHCRCYPGFQATP-TRQAC 487
Query: 374 VDHTPKCGGQSLCEKLLCACDQTAAECMTSASFNQS 409
VD LC C + + +C+ +A F S
Sbjct: 488 VDVDECIVSGGLCHLGRCVNTEGSFQCVCNAGFELS 523
>gi|239749157 PREDICTED: hypothetical protein XP_002346930 [Homo
sapiens]
Length = 178
Score = 32.3 bits (72), Expect = 0.97
Identities = 14/42 (33%), Positives = 21/42 (50%)
Query: 399 ECMTSASFNQSLKSPSRLGCPGQPAACEDSLHPVPAAPTLGS 440
+C TS ++ + + G G+PAAC P PA P G+
Sbjct: 62 DCRTSRRLRAAIVAAASPGLHGRPAACRGHPRPTPARPPTGA 103
>gi|239743220 PREDICTED: hypothetical protein XP_002342806 [Homo
sapiens]
Length = 178
Score = 32.3 bits (72), Expect = 0.97
Identities = 14/42 (33%), Positives = 21/42 (50%)
Query: 399 ECMTSASFNQSLKSPSRLGCPGQPAACEDSLHPVPAAPTLGS 440
+C TS ++ + + G G+PAAC P PA P G+
Sbjct: 62 DCRTSRRLRAAIVAAASPGLHGRPAACRGHPRPTPARPPTGA 103
>gi|239508892 PREDICTED: hypothetical protein [Homo sapiens]
Length = 178
Score = 32.3 bits (72), Expect = 0.97
Identities = 14/42 (33%), Positives = 21/42 (50%)
Query: 399 ECMTSASFNQSLKSPSRLGCPGQPAACEDSLHPVPAAPTLGS 440
+C TS ++ + + G G+PAAC P PA P G+
Sbjct: 62 DCRTSRRLRAAIVAAASPGLHGRPAACRGHPRPTPARPPTGA 103
>gi|6912230 adenosine deaminase, tRNA-specific 1 [Homo sapiens]
Length = 502
Score = 31.6 bits (70), Expect = 1.7
Identities = 25/86 (29%), Positives = 37/86 (43%), Gaps = 4/86 (4%)
Query: 376 HTPKCGGQSLCEKLLCACDQTAAECMTSASFNQSLKSPSRLGCPGQPAACEDSLHPVPAA 435
HTP CG S+ L DQ + + N S+++ S L PG CED PV
Sbjct: 139 HTP-CGDASIIPMLEFE-DQPCCPVFRNWANNSSVEASSNLEAPGNERKCEDPDSPVTKK 196
Query: 436 PTL--GSSSEEDSEEDPPQEDLGRAK 459
L G+++ E + + G+ K
Sbjct: 197 MRLEPGTAAREVTNGAAHHQSFGKQK 222
>gi|49574498 hypothetical protein LOC118461 isoform 2 [Homo sapiens]
Length = 719
Score = 31.2 bits (69), Expect = 2.2
Identities = 28/95 (29%), Positives = 38/95 (40%), Gaps = 7/95 (7%)
Query: 362 LLERLPWSPVVCVDHTPKCGGQSLCEKLLCACDQTAAECMTSASFNQSLKSPSRLGC--- 418
LLER + V PK G + + C ++T + C AS +Q +RL
Sbjct: 287 LLERKDTAGTVPESKAPKHYGDTTLLREPCPPERTVSPCQVQASCSQ---EENRLAAGAL 343
Query: 419 -PGQPAACEDSLHPVPAAPTLGSSSEEDSEEDPPQ 452
P C D V A SS+ DS+E P Q
Sbjct: 344 STSIPWGCRDPGAQVFAVEGKAPSSQPDSQEKPAQ 378
>gi|206597543 hypothetical protein LOC118461 isoform 1 [Homo
sapiens]
Length = 1435
Score = 31.2 bits (69), Expect = 2.2
Identities = 28/95 (29%), Positives = 38/95 (40%), Gaps = 7/95 (7%)
Query: 362 LLERLPWSPVVCVDHTPKCGGQSLCEKLLCACDQTAAECMTSASFNQSLKSPSRLGC--- 418
LLER + V PK G + + C ++T + C AS +Q +RL
Sbjct: 287 LLERKDTAGTVPESKAPKHYGDTTLLREPCPPERTVSPCQVQASCSQ---EENRLAAGAL 343
Query: 419 -PGQPAACEDSLHPVPAAPTLGSSSEEDSEEDPPQ 452
P C D V A SS+ DS+E P Q
Sbjct: 344 STSIPWGCRDPGAQVFAVEGKAPSSQPDSQEKPAQ 378
>gi|239751105 PREDICTED: hypothetical protein XP_002347705 [Homo
sapiens]
Length = 138
Score = 30.8 bits (68), Expect = 2.8
Identities = 26/88 (29%), Positives = 35/88 (39%), Gaps = 14/88 (15%)
Query: 330 CGQEGRGEPRDDLDRCCLSHHCCLEQVRRLGC--LLERLPWSPVVCVDHTPKCGGQSLCE 387
C Q G+ R+ CC H CC + GC ER W CV+ + C CE
Sbjct: 26 CYQRGQLYTRE----CCHGHDCCYTRAEEAGCSPKTERYSWQ---CVNQSVLC---VRCE 75
Query: 388 K--LLCACDQTAAECMTSASFNQSLKSP 413
K L + T +E +S + S P
Sbjct: 76 KPDLTNSSQLTPSEAEDCSSSDSSCVRP 103
>gi|5729945 nuclear factor of activated T-cells 5 isoform c [Homo
sapiens]
Length = 1531
Score = 30.8 bits (68), Expect = 2.8
Identities = 22/72 (30%), Positives = 37/72 (51%), Gaps = 4/72 (5%)
Query: 182 LNLLDTSFCLAQTPETTIKEDLTTLLPRVVPVEPT-DTSLTALS---GEEAGHDQEGVGA 237
++LL L +E + LLP+ + + P+ +TS+ ++S G EAG V A
Sbjct: 6 ISLLSADLDLESPKSLYSRESVYDLLPKELQLPPSRETSVASMSQTSGGEAGSPPPAVVA 65
Query: 238 ARATSPPGSAEI 249
A A+S P S+ +
Sbjct: 66 ADASSAPSSSSM 77
>gi|208973262 low density lipoprotein-related protein 12 isoform b
precursor [Homo sapiens]
Length = 840
Score = 30.8 bits (68), Expect = 2.8
Identities = 22/77 (28%), Positives = 36/77 (46%), Gaps = 9/77 (11%)
Query: 90 CPRDFEDYGCT-CRFE-----MEGLPVDESDSCCFQHRRCYEEAAEMDCLQ-DPAKLSTE 142
CP ++ CT C+ E G+ SD C +Q+ C + E +C P +
Sbjct: 382 CPNGRDETNCTMCQKEEFPCSRNGVCYPRSDRCNYQNH-CPNGSDEKNCFFCQPGNFHCK 440
Query: 143 VN-CVSKKIICESKDNC 158
N CV + +C+S+D+C
Sbjct: 441 NNRCVFESWVCDSQDDC 457
>gi|7305525 low density lipoprotein-related protein 12 isoform a
precursor [Homo sapiens]
Length = 859
Score = 30.8 bits (68), Expect = 2.8
Identities = 22/77 (28%), Positives = 36/77 (46%), Gaps = 9/77 (11%)
Query: 90 CPRDFEDYGCT-CRFE-----MEGLPVDESDSCCFQHRRCYEEAAEMDCLQ-DPAKLSTE 142
CP ++ CT C+ E G+ SD C +Q+ C + E +C P +
Sbjct: 401 CPNGRDETNCTMCQKEEFPCSRNGVCYPRSDRCNYQNH-CPNGSDEKNCFFCQPGNFHCK 459
Query: 143 VN-CVSKKIICESKDNC 158
N CV + +C+S+D+C
Sbjct: 460 NNRCVFESWVCDSQDDC 476
>gi|188528648 tenascin XB isoform 1 precursor [Homo sapiens]
Length = 4242
Score = 30.4 bits (67), Expect = 3.7
Identities = 27/94 (28%), Positives = 33/94 (35%), Gaps = 14/94 (14%)
Query: 82 GMKCVAGLCPRDFEDYG------CTCRFEMEGLPVDESDSC---CFQHRRCYEEAAEMDC 132
G C CP D + G C CR G P SC C Q RC E C
Sbjct: 210 GPSCGWPSCPGDCQGRGRCVQGVCVCRAGFSG-PDCSQRSCPRGCSQRGRC--EGGR--C 264
Query: 133 LQDPAKLSTEVNCVSKKIICESKDNCEHLLCTCD 166
+ DP + S C + CE+ C C+
Sbjct: 265 VCDPGYTGDDCGMRSCPRGCSQRGRCENGRCVCN 298
Score = 29.3 bits (64), Expect = 8.2
Identities = 24/93 (25%), Positives = 32/93 (34%), Gaps = 12/93 (12%)
Query: 82 GMKCVAGLCPRDF------EDYGCTCRFEMEG--LPVDESDSCCFQHRRCYEEAAEMDCL 133
G C CPRD ED C C G V C Q RC + C+
Sbjct: 365 GEDCSTRTCPRDCRGRGRCEDGECICDTGYSGDDCGVRSCPGDCNQRGRCEDGR----CV 420
Query: 134 QDPAKLSTEVNCVSKKIICESKDNCEHLLCTCD 166
P T+ + C + CE+ +C C+
Sbjct: 421 CWPGYTGTDCGSRACPRDCRGRGRCENGVCVCN 453
>gi|12232423 inositol 1,3,4,5,6-pentakisphosphate 2-kinase [Homo
sapiens]
Length = 491
Score = 30.4 bits (67), Expect = 3.7
Identities = 23/63 (36%), Positives = 28/63 (44%), Gaps = 2/63 (3%)
Query: 320 PEEFESYGCYCGQEGRGEPRDDLDRCCLSHHC-CLEQVRRLGCLLERLPWSPVVCVDHTP 378
P EF C Q R E R D D LS + CL + RL P++CV+ P
Sbjct: 81 PLEFVKQLCLKIQSERPESRCDKDLDTLSGYAMCLPNLTRLQTY-RFAEHRPILCVEIKP 139
Query: 379 KCG 381
KCG
Sbjct: 140 KCG 142
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.320 0.136 0.431
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,604,629
Number of Sequences: 37866
Number of extensions: 1111578
Number of successful extensions: 4491
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 28
Number of HSP's that attempted gapping in prelim test: 4396
Number of HSP's gapped (non-prelim): 100
length of query: 477
length of database: 18,247,518
effective HSP length: 106
effective length of query: 371
effective length of database: 14,233,722
effective search space: 5280710862
effective search space used: 5280710862
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.