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Search of human proteins with 221316735
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|221316735 growth arrest-specific 6 isoform 2 [Homo sapiens]
(405 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|221316735 growth arrest-specific 6 isoform 2 [Homo sapiens] 813 0.0
gi|4557617 growth arrest-specific 6 isoform 1 precursor [Homo sa... 813 0.0
gi|221316738 growth arrest-specific 6 isoform 3 [Homo sapiens] 761 0.0
gi|192447438 protein S, alpha preproprotein [Homo sapiens] 302 4e-82
gi|169218228 PREDICTED: similar to growth arrest-specific 6 [Hom... 203 3e-52
gi|226371777 sex hormone-binding globulin isoform 3 precursor [H... 95 1e-19
gi|7382460 sex hormone-binding globulin isoform 1 precursor [Hom... 95 1e-19
gi|226371613 sex hormone-binding globulin isoform 4 precursor [H... 88 1e-17
gi|38788416 laminin, alpha 1 precursor [Homo sapiens] 71 2e-12
gi|226371775 sex hormone-binding globulin isoform 2 precursor [H... 69 8e-12
gi|119466532 laminin alpha 2 subunit isoform b precursor [Homo s... 59 1e-08
gi|28559088 laminin alpha 2 subunit isoform a precursor [Homo sa... 59 1e-08
gi|21264602 laminin alpha 5 [Homo sapiens] 58 1e-08
gi|7662350 cell recognition molecule Caspr2 precursor [Homo sapi... 53 6e-07
gi|54873613 agrin [Homo sapiens] 45 1e-04
gi|116284404 cell recognition protein CASPR4 isoform 1 [Homo sap... 42 0.001
gi|239743756 PREDICTED: hypothetical protein LOC389722 isoform 2... 41 0.002
gi|239743754 PREDICTED: hypothetical protein LOC389722 isoform 1... 41 0.002
gi|47519929 cell recognition molecule CASPR3 [Homo sapiens] 41 0.002
gi|148664242 cell recognition protein CASPR4 isoform 2 [Homo sap... 41 0.002
gi|126012571 heparan sulfate proteoglycan 2 [Homo sapiens] 40 0.004
gi|4505463 contactin associated protein 1 precursor [Homo sapiens] 39 0.006
gi|21070969 neurexin 3 isoform 1 precursor [Homo sapiens] 39 0.006
gi|18640734 contactin associated protein-like 5 [Homo sapiens] 38 0.014
gi|38045910 laminin alpha 3 subunit isoform 1 [Homo sapiens] 38 0.014
gi|189217428 laminin alpha 3 subunit isoform 4 [Homo sapiens] 38 0.014
gi|189217425 laminin alpha 3 subunit isoform 3 [Homo sapiens] 38 0.014
gi|38045908 laminin alpha 3 subunit isoform 2 [Homo sapiens] 38 0.014
gi|208609951 neurexin 1 isoform alpha2 precursor [Homo sapiens] 38 0.019
gi|14149613 neurexin 1 isoform alpha1 precursor [Homo sapiens] 38 0.019
>gi|221316735 growth arrest-specific 6 isoform 2 [Homo sapiens]
Length = 405
Score = 813 bits (2101), Expect = 0.0
Identities = 405/405 (100%), Positives = 405/405 (100%)
Query: 1 MDTCEDILPCVPFSVAKSVKSLYLGRMFSGTPVIRLRFKRLQPTRLVAEFDFRTFDPEGI 60
MDTCEDILPCVPFSVAKSVKSLYLGRMFSGTPVIRLRFKRLQPTRLVAEFDFRTFDPEGI
Sbjct: 1 MDTCEDILPCVPFSVAKSVKSLYLGRMFSGTPVIRLRFKRLQPTRLVAEFDFRTFDPEGI 60
Query: 61 LLFAGGHQDSTWIVLALRAGRLELQLRYNGVGRVTSSGPVINHGMWQTISVEELARNLVI 120
LLFAGGHQDSTWIVLALRAGRLELQLRYNGVGRVTSSGPVINHGMWQTISVEELARNLVI
Sbjct: 61 LLFAGGHQDSTWIVLALRAGRLELQLRYNGVGRVTSSGPVINHGMWQTISVEELARNLVI 120
Query: 121 KVNRDAVMKIAVAGDLFQPERGLYHLNLTVGGIPFHEKDLVQPINPRLDGCMRSWNWLNG 180
KVNRDAVMKIAVAGDLFQPERGLYHLNLTVGGIPFHEKDLVQPINPRLDGCMRSWNWLNG
Sbjct: 121 KVNRDAVMKIAVAGDLFQPERGLYHLNLTVGGIPFHEKDLVQPINPRLDGCMRSWNWLNG 180
Query: 181 EDTTIQETVKVNTRMQCFSVTERGSFYPGSGFAFYSLDYMRTPLDVGTESTWEVEVVAHI 240
EDTTIQETVKVNTRMQCFSVTERGSFYPGSGFAFYSLDYMRTPLDVGTESTWEVEVVAHI
Sbjct: 181 EDTTIQETVKVNTRMQCFSVTERGSFYPGSGFAFYSLDYMRTPLDVGTESTWEVEVVAHI 240
Query: 241 RPAADTGVLFALWAPDLRAVPLSVALVDYHSTKKLKKQLVVLAVEHTALALMEIKVCDGQ 300
RPAADTGVLFALWAPDLRAVPLSVALVDYHSTKKLKKQLVVLAVEHTALALMEIKVCDGQ
Sbjct: 241 RPAADTGVLFALWAPDLRAVPLSVALVDYHSTKKLKKQLVVLAVEHTALALMEIKVCDGQ 300
Query: 301 EHVVTVSLRDGEATLEVDGTRGQSEVSAAQLQERLAVLERHLRSPVLTFAGGLPDVPVTS 360
EHVVTVSLRDGEATLEVDGTRGQSEVSAAQLQERLAVLERHLRSPVLTFAGGLPDVPVTS
Sbjct: 301 EHVVTVSLRDGEATLEVDGTRGQSEVSAAQLQERLAVLERHLRSPVLTFAGGLPDVPVTS 360
Query: 361 APVTAFYRGCMTLEVNRRLLDLDEAAYKHSDITAHSCPPVEPAAA 405
APVTAFYRGCMTLEVNRRLLDLDEAAYKHSDITAHSCPPVEPAAA
Sbjct: 361 APVTAFYRGCMTLEVNRRLLDLDEAAYKHSDITAHSCPPVEPAAA 405
>gi|4557617 growth arrest-specific 6 isoform 1 precursor [Homo
sapiens]
Length = 678
Score = 813 bits (2101), Expect = 0.0
Identities = 405/405 (100%), Positives = 405/405 (100%)
Query: 1 MDTCEDILPCVPFSVAKSVKSLYLGRMFSGTPVIRLRFKRLQPTRLVAEFDFRTFDPEGI 60
MDTCEDILPCVPFSVAKSVKSLYLGRMFSGTPVIRLRFKRLQPTRLVAEFDFRTFDPEGI
Sbjct: 274 MDTCEDILPCVPFSVAKSVKSLYLGRMFSGTPVIRLRFKRLQPTRLVAEFDFRTFDPEGI 333
Query: 61 LLFAGGHQDSTWIVLALRAGRLELQLRYNGVGRVTSSGPVINHGMWQTISVEELARNLVI 120
LLFAGGHQDSTWIVLALRAGRLELQLRYNGVGRVTSSGPVINHGMWQTISVEELARNLVI
Sbjct: 334 LLFAGGHQDSTWIVLALRAGRLELQLRYNGVGRVTSSGPVINHGMWQTISVEELARNLVI 393
Query: 121 KVNRDAVMKIAVAGDLFQPERGLYHLNLTVGGIPFHEKDLVQPINPRLDGCMRSWNWLNG 180
KVNRDAVMKIAVAGDLFQPERGLYHLNLTVGGIPFHEKDLVQPINPRLDGCMRSWNWLNG
Sbjct: 394 KVNRDAVMKIAVAGDLFQPERGLYHLNLTVGGIPFHEKDLVQPINPRLDGCMRSWNWLNG 453
Query: 181 EDTTIQETVKVNTRMQCFSVTERGSFYPGSGFAFYSLDYMRTPLDVGTESTWEVEVVAHI 240
EDTTIQETVKVNTRMQCFSVTERGSFYPGSGFAFYSLDYMRTPLDVGTESTWEVEVVAHI
Sbjct: 454 EDTTIQETVKVNTRMQCFSVTERGSFYPGSGFAFYSLDYMRTPLDVGTESTWEVEVVAHI 513
Query: 241 RPAADTGVLFALWAPDLRAVPLSVALVDYHSTKKLKKQLVVLAVEHTALALMEIKVCDGQ 300
RPAADTGVLFALWAPDLRAVPLSVALVDYHSTKKLKKQLVVLAVEHTALALMEIKVCDGQ
Sbjct: 514 RPAADTGVLFALWAPDLRAVPLSVALVDYHSTKKLKKQLVVLAVEHTALALMEIKVCDGQ 573
Query: 301 EHVVTVSLRDGEATLEVDGTRGQSEVSAAQLQERLAVLERHLRSPVLTFAGGLPDVPVTS 360
EHVVTVSLRDGEATLEVDGTRGQSEVSAAQLQERLAVLERHLRSPVLTFAGGLPDVPVTS
Sbjct: 574 EHVVTVSLRDGEATLEVDGTRGQSEVSAAQLQERLAVLERHLRSPVLTFAGGLPDVPVTS 633
Query: 361 APVTAFYRGCMTLEVNRRLLDLDEAAYKHSDITAHSCPPVEPAAA 405
APVTAFYRGCMTLEVNRRLLDLDEAAYKHSDITAHSCPPVEPAAA
Sbjct: 634 APVTAFYRGCMTLEVNRRLLDLDEAAYKHSDITAHSCPPVEPAAA 678
>gi|221316738 growth arrest-specific 6 isoform 3 [Homo sapiens]
Length = 379
Score = 761 bits (1964), Expect = 0.0
Identities = 379/379 (100%), Positives = 379/379 (100%)
Query: 27 MFSGTPVIRLRFKRLQPTRLVAEFDFRTFDPEGILLFAGGHQDSTWIVLALRAGRLELQL 86
MFSGTPVIRLRFKRLQPTRLVAEFDFRTFDPEGILLFAGGHQDSTWIVLALRAGRLELQL
Sbjct: 1 MFSGTPVIRLRFKRLQPTRLVAEFDFRTFDPEGILLFAGGHQDSTWIVLALRAGRLELQL 60
Query: 87 RYNGVGRVTSSGPVINHGMWQTISVEELARNLVIKVNRDAVMKIAVAGDLFQPERGLYHL 146
RYNGVGRVTSSGPVINHGMWQTISVEELARNLVIKVNRDAVMKIAVAGDLFQPERGLYHL
Sbjct: 61 RYNGVGRVTSSGPVINHGMWQTISVEELARNLVIKVNRDAVMKIAVAGDLFQPERGLYHL 120
Query: 147 NLTVGGIPFHEKDLVQPINPRLDGCMRSWNWLNGEDTTIQETVKVNTRMQCFSVTERGSF 206
NLTVGGIPFHEKDLVQPINPRLDGCMRSWNWLNGEDTTIQETVKVNTRMQCFSVTERGSF
Sbjct: 121 NLTVGGIPFHEKDLVQPINPRLDGCMRSWNWLNGEDTTIQETVKVNTRMQCFSVTERGSF 180
Query: 207 YPGSGFAFYSLDYMRTPLDVGTESTWEVEVVAHIRPAADTGVLFALWAPDLRAVPLSVAL 266
YPGSGFAFYSLDYMRTPLDVGTESTWEVEVVAHIRPAADTGVLFALWAPDLRAVPLSVAL
Sbjct: 181 YPGSGFAFYSLDYMRTPLDVGTESTWEVEVVAHIRPAADTGVLFALWAPDLRAVPLSVAL 240
Query: 267 VDYHSTKKLKKQLVVLAVEHTALALMEIKVCDGQEHVVTVSLRDGEATLEVDGTRGQSEV 326
VDYHSTKKLKKQLVVLAVEHTALALMEIKVCDGQEHVVTVSLRDGEATLEVDGTRGQSEV
Sbjct: 241 VDYHSTKKLKKQLVVLAVEHTALALMEIKVCDGQEHVVTVSLRDGEATLEVDGTRGQSEV 300
Query: 327 SAAQLQERLAVLERHLRSPVLTFAGGLPDVPVTSAPVTAFYRGCMTLEVNRRLLDLDEAA 386
SAAQLQERLAVLERHLRSPVLTFAGGLPDVPVTSAPVTAFYRGCMTLEVNRRLLDLDEAA
Sbjct: 301 SAAQLQERLAVLERHLRSPVLTFAGGLPDVPVTSAPVTAFYRGCMTLEVNRRLLDLDEAA 360
Query: 387 YKHSDITAHSCPPVEPAAA 405
YKHSDITAHSCPPVEPAAA
Sbjct: 361 YKHSDITAHSCPPVEPAAA 379
>gi|192447438 protein S, alpha preproprotein [Homo sapiens]
Length = 676
Score = 302 bits (773), Expect = 4e-82
Identities = 163/401 (40%), Positives = 244/401 (60%), Gaps = 15/401 (3%)
Query: 3 TCEDILPCVPFSVAKSVKSLYLGRMFSGTPVIRLRFKRLQPTRLVAEFDFRTFDPEGILL 62
+CE + C+P ++ + LYL F+G V+ L+F+ + +R AEFDFRT+D EG++L
Sbjct: 281 SCEVVSVCLPLNLDTKYELLYLAEQFAGV-VLYLKFRLPEISRFSAEFDFRTYDSEGVIL 339
Query: 63 FAGGHQDSTWIVLALRAGRLELQLRYNGVGRVTSSGPVINHGMWQTISVEELARNLVIKV 122
+A S W+++ALR G++E+QL+ ++T+ G VIN+G+W +SVEEL ++ IK+
Sbjct: 340 YAESIDHSAWLLIALRGGKIEVQLKNEHTSKITTGGDVINNGLWNMVSVEELEHSISIKI 399
Query: 123 NRDAVMKIAVAGDLFQPERGLYHLNLTVGGIPFH-EKDLVQPINPRLDGCMRSWNWLNGE 181
++AVM I G LF+PE GL + G P E +L++PINPRLDGC+RSWN +
Sbjct: 400 AKEAVMDINKPGPLFKPENGLLETKVYFAGFPRKVESELIKPINPRLDGCIRSWNLMKQG 459
Query: 182 DTTIQETVKVNTRMQCFSVTERGSFYPGSGFAFYSLDYMRTPLDVGTESTWEVEVVAHIR 241
+ I+E ++ C E+GS+YPGSG A + +DY +V + W V V +IR
Sbjct: 460 ASGIKEIIQEKQNKHCLVTVEKGSYYPGSGIAQFHIDYN----NVSSAEGWHVNVTLNIR 515
Query: 242 PAADTGVLFALWAPDLRAVPLSVALVDYHSTKKLKKQLVVLAVEHTAL-ALMEIKVC-DG 299
P+ TGV+ AL + + VP +V+LVD S K Q ++L+VE+T + + + +C D
Sbjct: 516 PSTGTGVMLALVSGN-NTVPFAVSLVDSTSE---KSQDILLSVENTVIYRIQALSLCSDQ 571
Query: 300 QEHVVTVSLRDGEATLEVDGTRGQSEVSAAQLQERLAVLERHLRSPVLTFAGGLPDVPVT 359
Q H + R LE+ +S LQ +LAVL++ +++ V T+ GGLPDVP +
Sbjct: 572 QSH---LEFRVNRNNLELSTPLKIETISHEDLQRQLAVLDKAMKAKVATYLGGLPDVPFS 628
Query: 360 SAPVTAFYRGCMTLEVNRRLLDLDEAAYKHSDITAHSCPPV 400
+ PV AFY GCM + +N LDLDEA KH+DI AHSCP V
Sbjct: 629 ATPVNAFYNGCMEVNINGVQLDLDEAISKHNDIRAHSCPSV 669
>gi|169218228 PREDICTED: similar to growth arrest-specific 6 [Homo
sapiens]
Length = 100
Score = 203 bits (516), Expect = 3e-52
Identities = 94/96 (97%), Positives = 95/96 (98%)
Query: 128 MKIAVAGDLFQPERGLYHLNLTVGGIPFHEKDLVQPINPRLDGCMRSWNWLNGEDTTIQE 187
MKIAVAGDLFQPERGLYHLNLTVGGIPFHEKDLVQPINPRLDGCMRSWNWLNGEDTTIQE
Sbjct: 1 MKIAVAGDLFQPERGLYHLNLTVGGIPFHEKDLVQPINPRLDGCMRSWNWLNGEDTTIQE 60
Query: 188 TVKVNTRMQCFSVTERGSFYPGSGFAFYSLDYMRTP 223
TVKVNTRMQCFSVTERGSFYPGSGFAFYSLDYM+ P
Sbjct: 61 TVKVNTRMQCFSVTERGSFYPGSGFAFYSLDYMQAP 96
>gi|226371777 sex hormone-binding globulin isoform 3 precursor [Homo
sapiens]
Length = 293
Score = 95.1 bits (235), Expect = 1e-19
Identities = 63/249 (25%), Positives = 119/249 (47%), Gaps = 9/249 (3%)
Query: 9 PCVPFSVAKSVKSLYLGRMFSGTPVIRLRFKRLQPTRLVAEFDFRTFDPEGILLFAGGHQ 68
P +P A +++L P+ + F + T+ + F+ RT+DPEG++ + +
Sbjct: 32 PVLPTQSAHDPPAVHLSNGPGQEPIAVMTFDLTKITKTSSSFEVRTWDPEGVIFYGDTNP 91
Query: 69 DSTWIVLALRAGRLELQLRYNGVGRVTSSGPVINHGMWQTISVEELARNLVIKVNRDAVM 128
W +L LR GR E+QL + +GP ++ G W + V+ +++++V+ + V+
Sbjct: 92 KDDWFMLGLRDGRPEIQLHNHWAQLTVGAGPRLDDGRWHQVEVKMEGDSVLLEVDGEEVL 151
Query: 129 KI-AVAGDLFQPERGLYHLNLTVGGIPFHEKDLVQPINPRLDGCMRSWNWLNGEDTTIQE 187
++ V+G L + + + +GG+ F +L P+ P LDGC+R +WL+ + I
Sbjct: 152 RLRQVSGPLTSKRHPI--MRIALGGLLFPASNLRLPLVPALDGCLRRDSWLD-KQAEISA 208
Query: 188 TVKVNTRMQCFSVTERGSFYPGSGFAFYSLDYMRTPLDVGTESTWEVEVVAHIRPAADTG 247
+ + R C + G F P A ++L + P W + ++ AA +G
Sbjct: 209 SAPTSLR-SCDVESNPGIFLPPGTQAEFNLRDIPQP----HAEPWAFSLDLGLKQAAGSG 263
Query: 248 VLFALWAPD 256
L AL P+
Sbjct: 264 HLLALGTPE 272
>gi|7382460 sex hormone-binding globulin isoform 1 precursor [Homo
sapiens]
Length = 402
Score = 95.1 bits (235), Expect = 1e-19
Identities = 63/249 (25%), Positives = 119/249 (47%), Gaps = 9/249 (3%)
Query: 9 PCVPFSVAKSVKSLYLGRMFSGTPVIRLRFKRLQPTRLVAEFDFRTFDPEGILLFAGGHQ 68
P +P A +++L P+ + F + T+ + F+ RT+DPEG++ + +
Sbjct: 32 PVLPTQSAHDPPAVHLSNGPGQEPIAVMTFDLTKITKTSSSFEVRTWDPEGVIFYGDTNP 91
Query: 69 DSTWIVLALRAGRLELQLRYNGVGRVTSSGPVINHGMWQTISVEELARNLVIKVNRDAVM 128
W +L LR GR E+QL + +GP ++ G W + V+ +++++V+ + V+
Sbjct: 92 KDDWFMLGLRDGRPEIQLHNHWAQLTVGAGPRLDDGRWHQVEVKMEGDSVLLEVDGEEVL 151
Query: 129 KI-AVAGDLFQPERGLYHLNLTVGGIPFHEKDLVQPINPRLDGCMRSWNWLNGEDTTIQE 187
++ V+G L + + + +GG+ F +L P+ P LDGC+R +WL+ + I
Sbjct: 152 RLRQVSGPLTSKRHPI--MRIALGGLLFPASNLRLPLVPALDGCLRRDSWLD-KQAEISA 208
Query: 188 TVKVNTRMQCFSVTERGSFYPGSGFAFYSLDYMRTPLDVGTESTWEVEVVAHIRPAADTG 247
+ + R C + G F P A ++L + P W + ++ AA +G
Sbjct: 209 SAPTSLR-SCDVESNPGIFLPPGTQAEFNLRDIPQP----HAEPWAFSLDLGLKQAAGSG 263
Query: 248 VLFALWAPD 256
L AL P+
Sbjct: 264 HLLALGTPE 272
>gi|226371613 sex hormone-binding globulin isoform 4 precursor [Homo
sapiens]
Length = 287
Score = 88.2 bits (217), Expect = 1e-17
Identities = 54/210 (25%), Positives = 104/210 (49%), Gaps = 5/210 (2%)
Query: 9 PCVPFSVAKSVKSLYLGRMFSGTPVIRLRFKRLQPTRLVAEFDFRTFDPEGILLFAGGHQ 68
P +P A +++L P+ + F + T+ + F+ RT+DPEG++ + +
Sbjct: 32 PVLPTQSAHDPPAVHLSNGPGQEPIAVMTFDLTKITKTSSSFEVRTWDPEGVIFYGDTNP 91
Query: 69 DSTWIVLALRAGRLELQLRYNGVGRVTSSGPVINHGMWQTISVEELARNLVIKVNRDAVM 128
W +L LR GR E+QL + +GP ++ G W + V+ +++++V+ + V+
Sbjct: 92 KDDWFMLGLRDGRPEIQLHNHWAQLTVGAGPRLDDGRWHQVEVKMEGDSVLLEVDGEEVL 151
Query: 129 KI-AVAGDLFQPERGLYHLNLTVGGIPFHEKDLVQPINPRLDGCMRSWNWLNGEDTTIQE 187
++ V+G L + + + +GG+ F +L P+ P LDGC+R +WL+ + I
Sbjct: 152 RLRQVSGPLTSKRHPI--MRIALGGLLFPASNLRLPLVPALDGCLRRDSWLD-KQAEISA 208
Query: 188 TVKVNTRMQCFSVTERGSFYPGSGFAFYSL 217
+ + R C + G F P A ++L
Sbjct: 209 SAPTSLR-SCDVESNPGIFLPPGTQAEFNL 237
>gi|38788416 laminin, alpha 1 precursor [Homo sapiens]
Length = 3075
Score = 71.2 bits (173), Expect = 2e-12
Identities = 83/367 (22%), Positives = 146/367 (39%), Gaps = 38/367 (10%)
Query: 45 RLVAEFDFRTFDPEGILLFAGGHQDSTWIVLALRAGRLELQLRYNGVGRVTSSGP-VINH 103
+L E RTF G++ + + + VL L GRL G GR S P +++
Sbjct: 2736 KLSVELSIRTFASSGLIYYMAHQNQADYAVLQLHGGRLHFMFDL-GKGRTKVSHPALLSD 2794
Query: 104 GMWQTISVEELARNLVIKVN-RDAVMKIAVAGDLFQPERGLYHLNLTVGGIPF-HEKDLV 161
G W T+ + + R I V+ R++ M V GL++L GG+P ++ +
Sbjct: 2795 GKWHTVKTDYVKRKGFITVDGRESPMVTVVGDGTMLDVEGLFYL----GGLPSQYQARKI 2850
Query: 162 QPINPRLDGCMRSWNWLNGEDTTIQETVKVNTRMQCFSVTERGSFYPGSGFAFYSLDYMR 221
I + C+ +N + V T +C++V + G+++ GSG+A
Sbjct: 2851 GNITHSIPACIGDVT-VNSKQLDKDSPVSAFTVNRCYAVAQEGTYFDGSGYA-------- 2901
Query: 222 TPLDVGTESTWEVEVVAHIRPAADTGVLFALWAPDLRAVPLSV--ALVDYHSTKKLKKQL 279
+ G + +V + R ++ GVL + + A+ L + V +H +
Sbjct: 2902 ALVKEGYKVQSDVNITLEFRTSSQNGVLLGISTAKVDAIGLELVDGKVLFHVNNGAGR-- 2959
Query: 280 VVLAVEHTALALMEIKVCDGQEHVVTVSLRDGEATLEVDGTRGQSEVSAAQLQERLAVLE 339
+ A E ++ CDG+ H + + TL VDG +E Q
Sbjct: 2960 ITAAYEPKTATVL----CDGKWHTLQANKSKHRITLIVDGNAVGAESPHTQ------STS 3009
Query: 340 RHLRSPVLTFAGGLP-DVPVTSAPVTAFYRGC---MTLEVNRRLLDLD-EAAYKHSDITA 394
+P+ + GG P V +RGC + L + ++ D A++ +
Sbjct: 3010 VDTNNPI--YVGGYPAGVKQKCLRSQTSFRGCLRKLALIKSPQVQSFDFSRAFELHGVFL 3067
Query: 395 HSCPPVE 401
HSCP E
Sbjct: 3068 HSCPGTE 3074
Score = 32.3 bits (72), Expect = 0.79
Identities = 20/72 (27%), Positives = 36/72 (50%), Gaps = 2/72 (2%)
Query: 52 FRTFDPEGILLFAGGHQDSTWIVLALRAGRLELQLRYNGVGRVT-SSGPVINHGMWQTIS 110
F TF P G+LL+ G + ++ + L GR+++ G G +T + N+G W I+
Sbjct: 2333 FNTFSPNGLLLYLGSYGTKDFLSIELFRGRVKVMTDL-GSGPITLLTDRRYNNGTWYKIA 2391
Query: 111 VEELARNLVIKV 122
+ + V+ V
Sbjct: 2392 FQRNRKQGVLAV 2403
>gi|226371775 sex hormone-binding globulin isoform 2 precursor [Homo
sapiens]
Length = 384
Score = 68.9 bits (167), Expect = 8e-12
Identities = 55/249 (22%), Positives = 106/249 (42%), Gaps = 27/249 (10%)
Query: 9 PCVPFSVAKSVKSLYLGRMFSGTPVIRLRFKRLQPTRLVAEFDFRTFDPEGILLFAGGHQ 68
P +P A +++L P+ + F + T+ + F+ RT+DPEG++ + +
Sbjct: 32 PVLPTQSAHDPPAVHLSNGPGQEPIAVMTFDLTKITKTSSSFEVRTWDPEGVIFYGDTNP 91
Query: 69 DSTWIVLALRAGRLELQLRYNGVGRVTSSGPVINHGMWQTISVEELARNLVIKVNRDAVM 128
W +L LR GR E+QL + +GP ++ G W + V+ +++++V+ + V+
Sbjct: 92 KDDWFMLGLRDGRPEIQLHNHWAQLTVGAGPRLDDGRWHQVEVKMEGDSVLLEVDGEEVL 151
Query: 129 KI-AVAGDLFQPERGLYHLNLTVGGIPFHEKDLVQPINPRLDGCMRSWNWLNGEDTTIQE 187
++ V+G L + + + +GG+ F +L P I
Sbjct: 152 RLRQVSGPLTSKRHPI--MRIALGGLLFPASNLRLP-------------------AEISA 190
Query: 188 TVKVNTRMQCFSVTERGSFYPGSGFAFYSLDYMRTPLDVGTESTWEVEVVAHIRPAADTG 247
+ + R C + G F P A ++L + P W + ++ AA +G
Sbjct: 191 SAPTSLR-SCDVESNPGIFLPPGTQAEFNLRDIPQP----HAEPWAFSLDLGLKQAAGSG 245
Query: 248 VLFALWAPD 256
L AL P+
Sbjct: 246 HLLALGTPE 254
>gi|119466532 laminin alpha 2 subunit isoform b precursor [Homo
sapiens]
Length = 3118
Score = 58.5 bits (140), Expect = 1e-08
Identities = 78/332 (23%), Positives = 131/332 (39%), Gaps = 34/332 (10%)
Query: 45 RLVAEFDFRTFDPEGILLFAGGHQDSTWIVLALRAGRLELQLRYNGVGRVTSSGPVINHG 104
RL E + RT G+L + + + + LR G T IN G
Sbjct: 2782 RLTIELEVRTEAESGLLFYMARINHADFATVQLRNGLPYFSYDLGSGDTHTMIPTKINDG 2841
Query: 105 MWQTISVEELARNLVIKVNRDAVMKIAVA-GDLFQPERGLYHLNLTVGGIPF-HEKDLVQ 162
W I + + ++ V+ + I+ D+ LY VGG+P + +
Sbjct: 2842 QWHKIKIMRSKQEGILYVDGASNRTISPKKADILDVVGMLY-----VGGLPINYTTRRIG 2896
Query: 163 PINPRLDGCMRSWNWLNGEDTTIQETVKVNTRMQCFSVTERGSFYPGSGFAFYSLDYMRT 222
P+ +DGC+R+ + Q T + CF+ +RG+++ G+GFA ++ +
Sbjct: 2897 PVTYSIDGCVRNLHMAEAPADLEQPTSSFHVGT-CFANAQRGTYFDGTGFA-KAVGGFKV 2954
Query: 223 PLDVGTESTWEVEVVAHIRPAADTGVLFALWAPDLRAVPLSVALVDYHSTKKLKKQLVVL 282
LD+ E R TGVL + + + + + ++D +KL +
Sbjct: 2955 GLDLLVE--------FEFRTTTTTGVLLGISSQKMDG--MGIEMID----EKLMFHVDNG 3000
Query: 283 AVEHTAL--ALMEIKVCDGQEHVVTVSLRDGEATLEVDGTRGQSEVSAAQLQERLAVLER 340
A TA+ A + +CDGQ H VT + L VDG + +++ A
Sbjct: 3001 AGRFTAVYDAGVPGHLCDGQWHKVTANKIKHRIELTVDGNQVEAQ------SPNPASTSA 3054
Query: 341 HLRSPVLTFAGGLPDVPVTSAPVTAF-YRGCM 371
PV F GG PD T+ +RGC+
Sbjct: 3055 DTNDPV--FVGGFPDDLKQFGLTTSIPFRGCI 3084
>gi|28559088 laminin alpha 2 subunit isoform a precursor [Homo
sapiens]
Length = 3122
Score = 58.5 bits (140), Expect = 1e-08
Identities = 78/332 (23%), Positives = 131/332 (39%), Gaps = 34/332 (10%)
Query: 45 RLVAEFDFRTFDPEGILLFAGGHQDSTWIVLALRAGRLELQLRYNGVGRVTSSGPVINHG 104
RL E + RT G+L + + + + LR G T IN G
Sbjct: 2786 RLTIELEVRTEAESGLLFYMARINHADFATVQLRNGLPYFSYDLGSGDTHTMIPTKINDG 2845
Query: 105 MWQTISVEELARNLVIKVNRDAVMKIAVA-GDLFQPERGLYHLNLTVGGIPF-HEKDLVQ 162
W I + + ++ V+ + I+ D+ LY VGG+P + +
Sbjct: 2846 QWHKIKIMRSKQEGILYVDGASNRTISPKKADILDVVGMLY-----VGGLPINYTTRRIG 2900
Query: 163 PINPRLDGCMRSWNWLNGEDTTIQETVKVNTRMQCFSVTERGSFYPGSGFAFYSLDYMRT 222
P+ +DGC+R+ + Q T + CF+ +RG+++ G+GFA ++ +
Sbjct: 2901 PVTYSIDGCVRNLHMAEAPADLEQPTSSFHVGT-CFANAQRGTYFDGTGFA-KAVGGFKV 2958
Query: 223 PLDVGTESTWEVEVVAHIRPAADTGVLFALWAPDLRAVPLSVALVDYHSTKKLKKQLVVL 282
LD+ E R TGVL + + + + + ++D +KL +
Sbjct: 2959 GLDLLVE--------FEFRTTTTTGVLLGISSQKMDG--MGIEMID----EKLMFHVDNG 3004
Query: 283 AVEHTAL--ALMEIKVCDGQEHVVTVSLRDGEATLEVDGTRGQSEVSAAQLQERLAVLER 340
A TA+ A + +CDGQ H VT + L VDG + +++ A
Sbjct: 3005 AGRFTAVYDAGVPGHLCDGQWHKVTANKIKHRIELTVDGNQVEAQ------SPNPASTSA 3058
Query: 341 HLRSPVLTFAGGLPDVPVTSAPVTAF-YRGCM 371
PV F GG PD T+ +RGC+
Sbjct: 3059 DTNDPV--FVGGFPDDLKQFGLTTSIPFRGCI 3088
>gi|21264602 laminin alpha 5 [Homo sapiens]
Length = 3695
Score = 58.2 bits (139), Expect = 1e-08
Identities = 94/350 (26%), Positives = 130/350 (37%), Gaps = 43/350 (12%)
Query: 59 GILLFAGG-HQDSTWIVLALRAGRLELQLRYNGVGRVTSSGPVINHGMWQTISVEELARN 117
G+LLF S + L L G Q+ G S G W +SV +N
Sbjct: 3377 GLLLFTARLRPGSPSLALFLSNGHFVAQMEGLGTRLRAQSRQRSRPGRWHKVSVR-WEKN 3435
Query: 118 LVIKVNRDAVMKIAVAGDLFQPERGLYHLN---LTVGGIPFHEKDLVQPINPRLDGCMRS 174
++ V D + G Q +G H L VGG+P P+ GC++
Sbjct: 3436 RILLVT-DGARAWSQEGPHRQ-HQGAEHPQPHTLFVGGLPASSHSSKLPVTVGFSGCVKR 3493
Query: 175 WNWLNGEDTTIQETVKVNTRMQCFSVTERGSFYPGSGFAFYSLDYMRTPL-DVGTESTWE 233
L+G T E G F+PGSG +LD L DVG E
Sbjct: 3494 LR-LHGRPLGAP-TRMAGVTPCILGPLEAGLFFPGSG-GVITLDLPGATLPDVGLE---- 3546
Query: 234 VEVVAHIRPAADTGVLFALWAPDLRAVPLSVALVDYHSTKKLKKQLVVLAV----EHTAL 289
+RP A TG++F L R P Y + +KQ+++ A E +
Sbjct: 3547 ----LEVRPLAVTGLIFHLG--QARTPP-------YLQLQVTEKQVLLRADDGAGEFSTS 3593
Query: 290 ALMEIKVCDGQEHVVTVSLRDGEATLEVDGTRGQSEVSAAQLQERLAVLERHLRSPVLTF 349
+CDGQ H + V LEVD QS + L A +P +
Sbjct: 3594 VTRPSVLCDGQWHRLAVMKSGNVLRLEVDA---QSNHTVGPLLAAAA------GAPAPLY 3644
Query: 350 AGGLPDVPVTSAPVTAFYRGCM-TLEVNRRLLDLDEAAYKHSDITAHSCP 398
GGLP+ P+ P Y GCM L VNR + + + H + A CP
Sbjct: 3645 LGGLPE-PMAVQPWPPAYCGCMRRLAVNRSPVAMTRSVEVHGAVGASGCP 3693
>gi|7662350 cell recognition molecule Caspr2 precursor [Homo
sapiens]
Length = 1331
Score = 52.8 bits (125), Expect = 6e-07
Identities = 90/380 (23%), Positives = 160/380 (42%), Gaps = 49/380 (12%)
Query: 28 FSGTPVIRLRF--KRLQPTRLVAEFDFRTFDPEGILLFAGGHQDSTWIVLALRAGRLELQ 85
F G V+ RF K+++ + V +F+T + EG++L G Q +I L L+ +L L
Sbjct: 190 FDGHVVLPYRFRNKKMKTLKDVIALNFKTSESEGVILHGEG-QQGDYITLELKKAKLVLS 248
Query: 86 LRY--NGVGRV-----TSSGPVINHGMWQTISVEELARNLVIKVNRDAVMKIAVAGDLFQ 138
L N +G + +G +++ W ++ +E R++ + ++R ++ G+
Sbjct: 249 LNLGSNQLGPIYGHTSVMTGSLLDDHHWHSVVIERQGRSINLTLDR-SMQHFRTNGEFDY 307
Query: 139 PERGLYHLNLTVGGIPFHEKDLVQPINPRLDGCMRSWNWLNGEDTTIQETVKV---NTRM 195
+ +T GGIPF K GCM S N+ T + K+ N
Sbjct: 308 LD---LDYEITFGGIPFSGKP-SSSSRKNFKGCMESINYNGVNITDLARRKKLEPSNVGN 363
Query: 196 QCFSVTERGSFYPGSGFAFYSLDYMRTPLDVGTESTWEVEVVAHIRPAADTGVL-FALWA 254
FS E Y F F + Y+ P G + V R G+L F+ +A
Sbjct: 364 LSFSCVEP---YTVPVF-FNATSYLEVP---GRLNQDLFSVSFQFRTWNPNGLLVFSHFA 416
Query: 255 PDLRAVPLSVALVDYHSTKKLKKQLVVLAVEHTALALMEIK----VCDGQEHVVTVSLRD 310
+L V + + K V + + T ++ ++I + DGQ H V ++
Sbjct: 417 DNLGNVEIDLT---------ESKVGVHINITQTKMSQIDISSGSGLNDGQWHEVRFLAKE 467
Query: 311 GEATLEVDGTRGQSEVSAAQLQERLAVLERHLRSPVLTFAGGLPDVPVTSAPV-TAFYRG 369
A L +DG + + + LQ + E++ F G L + +S V ++G
Sbjct: 468 NFAILTIDGDEASAVRTNSPLQVKTG--EKYF------FGGFLNQMNNSSHSVLQPSFQG 519
Query: 370 CMTL-EVNRRLLDLDEAAYK 388
CM L +V+ +L++L E A +
Sbjct: 520 CMQLIQVDDQLVNLYEVAQR 539
>gi|54873613 agrin [Homo sapiens]
Length = 2045
Score = 45.1 bits (105), Expect = 1e-04
Identities = 40/153 (26%), Positives = 65/153 (42%), Gaps = 14/153 (9%)
Query: 25 GRMFSGTPVIRLRFKRLQPTRLVAEFDFRTFDPEGILLFAGGHQDSTWIVLALRAGRLEL 84
GR F P +R RL EF R +P+G+LL+ G + ++ LAL GR++L
Sbjct: 1379 GRSFLAFPTLRA----YHTLRLALEF--RALEPQGLLLYNGNARGKDFLALALLDGRVQL 1432
Query: 85 QLRYNGVGRVTSSGPVINHGMWQTISVEELARNLVIKVNRDAVMKIAVAGDLFQPERGL- 143
+ V +S + G W + + R + V+ + V G+ GL
Sbjct: 1433 RFDTGSGPAVLTSAVPVEPGQWHRLELSRHWRRGTLSVDGET----PVLGESPSGTDGLN 1488
Query: 144 YHLNLTVGGIPFHEKDLVQP---INPRLDGCMR 173
+L VGG+P + + + L GC+R
Sbjct: 1489 LDTDLFVGGVPEDQAAVALERTFVGAGLRGCIR 1521
Score = 35.4 bits (80), Expect = 0.093
Identities = 29/101 (28%), Positives = 43/101 (42%), Gaps = 6/101 (5%)
Query: 28 FSGTPVIRLR----FKRLQPTRLVAEFDFRTFDPEGILLFAGGHQDST--WIVLALRAGR 81
F+G + LR F R ++ E F P G+LL+ G D ++ LALR R
Sbjct: 1640 FNGFSHLELRGLHTFARDLGEKMALEVVFLARGPSGLLLYNGQKTDGKGDFVSLALRDRR 1699
Query: 82 LELQLRYNGVGRVTSSGPVINHGMWQTISVEELARNLVIKV 122
LE + V S + G W +S+E R ++V
Sbjct: 1700 LEFRYDLGKGAAVIRSREPVTLGAWTRVSLERNGRKGALRV 1740
>gi|116284404 cell recognition protein CASPR4 isoform 1 [Homo
sapiens]
Length = 1308
Score = 41.6 bits (96), Expect = 0.001
Identities = 88/377 (23%), Positives = 154/377 (40%), Gaps = 46/377 (12%)
Query: 39 KRLQPTRLVAEFDFRTFDPEGILLFAGGHQDSTWIVLALRAGRLELQLRYNGVGRVTSSG 98
K L P + + F+T +GILL G + I L LR RL L + +G ++ S+
Sbjct: 199 KSLSPIKDIISLKFKTMQSDGILLHREG-PNGDHITLQLRRARLFLLIN-SGEAKLPSTS 256
Query: 99 PVINHGMWQTISVEELARNLVIKVNRDAVMKIAVAGDLFQPERGLYHL-----NLTVGGI 153
++N + + + L+ ++ + + F RG ++L ++ GGI
Sbjct: 257 TLVNLTLGSLLDDQHWHSVLIQRLGKQVNFTVDEHRHHFHA-RGEFNLMNLDYEISFGGI 315
Query: 154 PFHEKDLVQPINPRLDGCMRS--WNWLNGEDTTIQETVKVNTRMQCFSVTERGSFYPGSG 211
P K + P + GC+ + +N ++ D Q+ ++ + P +
Sbjct: 316 PAPGKSVSFP-HRNFHGCLENLYYNGVDIIDLAKQQKPQIIAMGNVSFSCSQPQSMPVTF 374
Query: 212 FAFYSLDYMRTPLDVGTESTWEVEVVAHIRPAADTGVLFALWAPDLRAVPLSVALVDYHS 271
+ S Y+ P G E EV R G+L +L+ + + L + S
Sbjct: 375 LS--SRSYLALPDFSGEE---EVSATFQFRTWNKAGLLLF---SELQLISGGILL--FLS 424
Query: 272 TKKLKKQLVV---LAVEHTALALMEIKVCDGQEHVVTVSLRDGEATLEVDGTRGQSEVSA 328
KLK L L + TA +++ DGQ H V++S + ++ VDG SA
Sbjct: 425 DGKLKSNLYQPGKLPSDITA----GVELNDGQWHSVSLSAKKNHLSVAVDG----QMASA 476
Query: 329 AQLQERLAVLERHLRSPVLTFAGGLPDVPVTS---APVTAFYRGCMTL-EVNRRLLDL-- 382
A L + + S + GG PD S +P+ F +GCM L ++ +++DL
Sbjct: 477 APL-----LGPEQIYSGGTYYFGGCPDKSFGSKCKSPLGGF-QGCMRLISISGKVVDLIS 530
Query: 383 --DEAAYKHSDITAHSC 397
+ SD+ SC
Sbjct: 531 VQQGSLGNFSDLQIDSC 547
>gi|239743756 PREDICTED: hypothetical protein LOC389722 isoform 2
[Homo sapiens]
Length = 1207
Score = 40.8 bits (94), Expect = 0.002
Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 1/85 (1%)
Query: 50 FDFRTFDPEGILLFAGGHQDSTWIVLALRAGRLELQLRYNGVG-RVTSSGPVINHGMWQT 108
F FRT++ G LLF + S VL L+ G+L+L L G R ++G +N G W +
Sbjct: 396 FQFRTWNRAGHLLFGELQRGSGSFVLFLKDGKLKLSLFQAGQSPRNVTAGAGLNDGQWHS 455
Query: 109 ISVEELARNLVIKVNRDAVMKIAVA 133
+S ++ + V+ D ++ VA
Sbjct: 456 VSFSAKWSHMNVVVDDDTAVQPLVA 480
>gi|239743754 PREDICTED: hypothetical protein LOC389722 isoform 1
[Homo sapiens]
Length = 1288
Score = 40.8 bits (94), Expect = 0.002
Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 1/85 (1%)
Query: 50 FDFRTFDPEGILLFAGGHQDSTWIVLALRAGRLELQLRYNGVG-RVTSSGPVINHGMWQT 108
F FRT++ G LLF + S VL L+ G+L+L L G R ++G +N G W +
Sbjct: 396 FQFRTWNRAGHLLFGELQRGSGSFVLFLKDGKLKLSLFQAGQSPRNVTAGAGLNDGQWHS 455
Query: 109 ISVEELARNLVIKVNRDAVMKIAVA 133
+S ++ + V+ D ++ VA
Sbjct: 456 VSFSAKWSHMNVVVDDDTAVQPLVA 480
>gi|47519929 cell recognition molecule CASPR3 [Homo sapiens]
Length = 1288
Score = 40.8 bits (94), Expect = 0.002
Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 1/85 (1%)
Query: 50 FDFRTFDPEGILLFAGGHQDSTWIVLALRAGRLELQLRYNGVG-RVTSSGPVINHGMWQT 108
F FRT++ G LLF + S VL L+ G+L+L L G R ++G +N G W +
Sbjct: 396 FQFRTWNRAGHLLFGELRRGSGSFVLFLKDGKLKLSLFQPGQSPRNVTAGAGLNDGQWHS 455
Query: 109 ISVEELARNLVIKVNRDAVMKIAVA 133
+S ++ + V+ D ++ VA
Sbjct: 456 VSFSAKWSHMNVVVDDDTAVQPLVA 480
Score = 28.9 bits (63), Expect = 8.7
Identities = 27/98 (27%), Positives = 43/98 (43%), Gaps = 10/98 (10%)
Query: 35 RLRFKRLQPTRLVAEFDFRTFDPEGILLFAGGHQDSTWIVLALRAGRLELQLRYNGVGRV 94
RL K L+P R V F+ GILL G Q I L L G+L L +G ++
Sbjct: 195 RLDKKPLKPIRDVISLKFKAMQSNGILLHREG-QHGNHITLELIKGKLVFFLN-SGNAKL 252
Query: 95 TSS--------GPVINHGMWQTISVEELARNLVIKVNR 124
S+ G +++ W ++ +E L + V++
Sbjct: 253 PSTIAPVTLTLGSLLDDQHWHSVLIELLDTQVNFTVDK 290
>gi|148664242 cell recognition protein CASPR4 isoform 2 [Homo
sapiens]
Length = 1235
Score = 40.8 bits (94), Expect = 0.002
Identities = 40/134 (29%), Positives = 62/134 (46%), Gaps = 18/134 (13%)
Query: 48 AEFDFRTFDPEGILLFAGGHQDSTWIVLALRAGRLELQLRYNG-VGRVTSSGPVINHGMW 106
A F FRT++ G+LLF+ S I+L L G+L+ L G + ++G +N G W
Sbjct: 321 ATFQFRTWNKAGLLLFSELQLISGGILLFLSDGKLKSNLYQPGKLPSDITAGVELNDGQW 380
Query: 107 QTISVEELARNLVIKVNRDAVMKIAVAGDLFQPER----GLYHLNLTVGGIPFHEKDLVQ 162
++S+ +L + V+ ++A A L PE+ G Y+ GG P +K
Sbjct: 381 HSVSLSAKKNHLSVAVDG----QMASAAPLLGPEQIYSGGTYYF----GGCP--DKSFGS 430
Query: 163 PINPRL---DGCMR 173
L GCMR
Sbjct: 431 KCKSPLGGFQGCMR 444
Score = 31.6 bits (70), Expect = 1.3
Identities = 23/93 (24%), Positives = 43/93 (46%), Gaps = 10/93 (10%)
Query: 39 KRLQPTRLVAEFDFRTFDPEGILLFAGGHQDSTWIVLALRAGRLELQLRYNGVGRVTSSG 98
K L P + + F+T +GILL G + I L LR RL L + +G ++ S+
Sbjct: 174 KSLSPIKDIISLKFKTMQSDGILLHREG-PNGDHITLQLRRARLFLLIN-SGEAKLPSTS 231
Query: 99 PVINHGM--------WQTISVEELARNLVIKVN 123
++N + W ++ ++ L + + V+
Sbjct: 232 TLVNLTLGSLLDDQHWHSVLIQRLGKQVNFTVD 264
>gi|126012571 heparan sulfate proteoglycan 2 [Homo sapiens]
Length = 4391
Score = 40.0 bits (92), Expect = 0.004
Identities = 22/77 (28%), Positives = 38/77 (49%), Gaps = 2/77 (2%)
Query: 49 EFDFRTFDPEGILLFAGGHQD--STWIVLALRAGRLELQLRYNGVGRVTSSGPVINHGMW 106
+ +F+ P+G+LLF+GG ++ LA+ G LE + V S + G W
Sbjct: 3954 DVEFKPLAPDGVLLFSGGKSGPVEDFVSLAMVGGHLEFRYELGSGLAVLRSAEPLALGRW 4013
Query: 107 QTISVEELARNLVIKVN 123
+S E L ++ ++VN
Sbjct: 4014 HRVSAERLNKDGSLRVN 4030
>gi|4505463 contactin associated protein 1 precursor [Homo sapiens]
Length = 1384
Score = 39.3 bits (90), Expect = 0.006
Identities = 92/378 (24%), Positives = 155/378 (41%), Gaps = 58/378 (15%)
Query: 28 FSGTPVIRLRFKRLQPTRL--VAEFDFRTFDPEGILLFAGGHQDSTWIVLALRAGRLELQ 85
F G I RF R L V F F+T + +G+LL A G Q ++ L L L L
Sbjct: 177 FDGDDAISYRFPRGVSRSLWDVFAFSFKTEEKDGLLLHAEGAQ-GDYVTLELEGAHLLLH 235
Query: 86 LRYNG------VGRVT-SSGPVINHGMWQTISVEELARNLVIKVNRDAVMKIAVAGDLFQ 138
+ G T S+G V+N W + V+ R++ ++ V + + GD
Sbjct: 236 MSLGSSPIQPRPGHTTVSAGGVLNDQHWHYVRVDRFGRDVNFTLD-GYVQRFILNGDF-- 292
Query: 139 PERGLYHLNLTVGG-IPFHEKDLVQPINPRLDGCMRS--WNWLNGEDTTIQETVKVNTRM 195
ER + +GG + K+L N R GC+ + +N +N D ++ +
Sbjct: 293 -ERLNLDTEMFIGGLVGAARKNLAYRHNFR--GCIENVIFNRVNIADLAVRRHSR----- 344
Query: 196 QCFSVTERGSFYPGSGFAFYSLDYMRTPLDVGTESTWEVEVVAHIRPAADTGVLFALWAP 255
+T G AF LD + P++ G + V+V R V F
Sbjct: 345 ----ITFEGK------VAFRCLDPVPHPINFGGPHNF-VQVPGFPR-RGRLAVSFRFRTW 392
Query: 256 DLRAVPLSVALVD--YHSTKKLKKQLVVLAVEHTALALMEI----KVCDGQEHVVTVSLR 309
DL + L L D H L + V +++ + ++ ++ DG H V +
Sbjct: 393 DLTGLLLFSRLGDGLGHVELTLSEGQVNVSIAQSGRKKLQFAAGYRLNDGFWHEVNFVAQ 452
Query: 310 DGEATLEVDGTRGQSEVSAAQLQERLAVLERHLRSPVLTFAGGLPDVPVT----SAPVTA 365
+ A + +D +V A+++ +L +R+ F GG P P + + TA
Sbjct: 453 ENHAVISID------DVEGAEVRVSYPLL---IRTGTSYFFGGCPK-PASRWDCHSNQTA 502
Query: 366 FYRGCM-TLEVNRRLLDL 382
F+ GCM L+V+ +L++L
Sbjct: 503 FH-GCMELLKVDGQLVNL 519
>gi|21070969 neurexin 3 isoform 1 precursor [Homo sapiens]
Length = 1061
Score = 39.3 bits (90), Expect = 0.006
Identities = 40/163 (24%), Positives = 71/163 (43%), Gaps = 27/163 (16%)
Query: 50 FDFRTFDPEGILLFAGG---------HQDST---WIVLALRAGRLELQLRY-NGVGRVTS 96
FDFRT +P G++LF G Q +T + + L G L L L +G +V +
Sbjct: 100 FDFRTTEPNGLILFTHGKPQERKDARSQKNTKVDFFAVELLDGNLYLLLDMGSGTIKVKA 159
Query: 97 SGPVINHGMWQTISVEELARNLVIKVN-RDAVMKIAVAGDLFQPERGLYHLNLTVGGIPF 155
+ N G W + ++ R+ I VN R + ++ E +Y +GG+P
Sbjct: 160 TQKKANDGEWYHVDIQRDGRSGTISVNSRRTPFTASGESEILDLEGDMY-----LGGLPE 214
Query: 156 HEKDLVQP-------INPRLDGCMRSWNWLNGEDTTIQETVKV 191
+ L+ P +N GC+R +++G I++ ++
Sbjct: 215 NRAGLILPTELWTAMLNYGYVGCIRDL-FIDGRSKNIRQLAEM 256
>gi|18640734 contactin associated protein-like 5 [Homo sapiens]
Length = 1306
Score = 38.1 bits (87), Expect = 0.014
Identities = 34/132 (25%), Positives = 60/132 (45%), Gaps = 10/132 (7%)
Query: 46 LVAEFDFRTFDPEGILLFAGGHQDSTWIVLALRAG--RLELQLRYNGVGRVTSSGPVINH 103
L F FRT++ +G+LL + S ++L+L G RL +Q V + +G +N
Sbjct: 389 LSVSFQFRTWNKDGLLLSTELSEGSGTLLLSLEGGILRLVIQKMTERVAEIL-TGSNLND 447
Query: 104 GMWQTISVEELARNLVIKVNRDAVMKIAVAGDLFQPERGLYHLNLTVGGIPFHEKDLVQP 163
G+W ++S+ + + ++ +A + + Y+ GG P + D Q
Sbjct: 448 GLWHSVSINARRNRITLTLDDEAAPPAPDSTWVQIYSGNSYYF----GGCPDNLTD-SQC 502
Query: 164 INP--RLDGCMR 173
+NP GCMR
Sbjct: 503 LNPIKAFQGCMR 514
Score = 37.0 bits (84), Expect = 0.032
Identities = 85/366 (23%), Positives = 138/366 (37%), Gaps = 53/366 (14%)
Query: 28 FSGTPVIRLRF--KRLQPTRLVAEFDFRTFDPEGILLFAGGHQDSTWIVLALRAGRLELQ 85
F G + RF K + + V F++ +G+L F G Q I L L+ GRL L
Sbjct: 183 FDGRSSLLYRFNQKLMSTLKDVISLKFKSMQGDGVL-FHGEGQRGDHITLELQKGRLALH 241
Query: 86 LRY-NGVGRVTSS------GPVINHGMWQTISVEELARNLVIKVNRDAVMKIAVAGDLFQ 138
L + R++SS G +++ W ++ +E + + + V++ G+
Sbjct: 242 LNLGDSKARLSSSLPSATLGSLLDDQHWHSVLIERVGKQVNFTVDKH-TQHFRTKGETDA 300
Query: 139 PERGLYHLNLTVGGIPFHEKDLVQPINPRLDGCMRS--WNWLNGEDTTIQETVKVNTRMQ 196
+ L+ GGIP K + GC+ + +N +N D + ++ T
Sbjct: 301 LD---IDYELSFGGIPVPGKPGTF-LKKNFHGCIENLYYNGVNIIDLAKRRKHQIYTGNV 356
Query: 197 CFSVTERGSFYPGSGFAFYSLDYMRTPLDVGTESTWEVEVVAHIRPAADTGVLFALWAPD 256
FS +E P + F S Y+ P GT + V R G+L
Sbjct: 357 TFSCSE-PQIVPIT-FVNSSGSYLLLP---GTPQIDGLSVSFQFRTWNKDGLL------- 404
Query: 257 LRAVPLSVALVDYHSTKKLKKQLVVLAV------EHTALALMEIKVCDGQEHVVTVSLRD 310
LS L + T L + +L + E A L + DG H V+++ R
Sbjct: 405 -----LSTELSEGSGTLLLSLEGGILRLVIQKMTERVAEILTGSNLNDGLWHSVSINARR 459
Query: 311 GEATLEVDGTRGQSEVSAAQLQERLAVLERHLRSPVLTFAGGLPDVPVTSA---PVTAFY 367
TL +D + +Q + S + GG PD S P+ AF
Sbjct: 460 NRITLTLDDEAAPPAPDSTWVQ---------IYSGNSYYFGGCPDNLTDSQCLNPIKAF- 509
Query: 368 RGCMTL 373
+GCM L
Sbjct: 510 QGCMRL 515
>gi|38045910 laminin alpha 3 subunit isoform 1 [Homo sapiens]
Length = 3333
Score = 38.1 bits (87), Expect = 0.014
Identities = 90/398 (22%), Positives = 143/398 (35%), Gaps = 82/398 (20%)
Query: 28 FSGTPVIRLRFK---RLQPTRLVAEFDFRTFDPEGILLFAGGHQDSTWIVLALRAGRLEL 84
F P L FK L R D +T G++ G ++++ L L GRL
Sbjct: 2989 FGDIPTSHLLFKLPQELLKPRSQFAVDMQTTSSRGLVFHTG--TKNSFMALYLSKGRLVF 3046
Query: 85 QLRYNGVGRVTSSGPVINHGMWQTISVEELARNLVIKVNRDAVMKIAVAGDLFQPERGLY 144
L +G S N G W T+ V G E+G
Sbjct: 3047 ALGTDGKKLRIKSKEKCNDGKWHTV----------------------VFGH--DGEKG-- 3080
Query: 145 HLNLTVGGIPFHEKDLVQPINPRLDGCMRSWNWLNGEDTTIQETVKVNTRMQC---FSVT 201
L V G+ E L P N + +R+ +L + +++ N+ + C F +
Sbjct: 3081 --RLVVDGLRAREGSL--PGNSTIS--IRAPVYLGSPPSGKPKSLPTNSFVGCLKNFQLD 3134
Query: 202 ERGSFYPGSGFAFYSLDYMRTPLDVGTESTWE---------------VEVVAHIRPAADT 246
+ + P S F S + PL+ G + E ++V IRP + T
Sbjct: 3135 SKPLYTPSSSFGVSSC--LGGPLEKGIYFSEEGGHVVLAHSVLLGPEFKLVFSIRPRSLT 3192
Query: 247 GVLFALWAPDLRAVPLSVALVDYHSTKKLKKQLVVLAVEHTALALMEIKVCDGQEHVVTV 306
G+L + + + L Y K+ + A + + +CDGQ H V V
Sbjct: 3193 GILIHIGSQPGKH------LCVYLEAGKVTASMDSGAGGTSTSVTPKQSLCDGQWHSVAV 3246
Query: 307 SLRDGEATLEVDG----TRGQSEVSAAQLQERLAVLERHLRSPVLTFAGGLP-DVPVTSA 361
+++ LE+D T GQ A QE L HL GG P ++
Sbjct: 3247 TIKQHILHLELDTDSSYTAGQIPFPPASTQEPL-----HL--------GGAPANLTTLRI 3293
Query: 362 PVTAFYRGCM-TLEVNRRLLDLDEAAYKHSDITAHSCP 398
PV + GC+ + VN + + EA ++ + CP
Sbjct: 3294 PVWKSFFGCLRNIHVNHIPVPVTEALEVQGPVSLNGCP 3331
Score = 35.4 bits (80), Expect = 0.093
Identities = 46/194 (23%), Positives = 83/194 (42%), Gaps = 17/194 (8%)
Query: 28 FSGTPVIRLRFKRLQPTRLVAEFDFRTFDPEGILLFAGGHQDSTWIVLALRAGRLELQLR 87
F GT R+ + P + T D G+L FA +I L + G+L ++ +
Sbjct: 2603 FEGTGYARVPTQPHAPIPTFGQTIQTTVD-RGLLFFA--ENGDRFISLNIEDGKLMVRYK 2659
Query: 88 YNG-VGRVTSSGPVINHGMWQTISVE--ELARNLVIKVNRDAVMKIAVAGDLFQPERGLY 144
N + + G IN+G +I ++ +L + + I V+ V + G++F + Y
Sbjct: 2660 LNSELPKERGVGDAINNGRDHSIQIKIGKLQKRMWINVD---VQNTIIDGEVF--DFSTY 2714
Query: 145 HLNLTVGGIPFHEKDLVQPINPRLDGCMRSWNWLNGEDTTIQETVKVNTR-MQCFSVTER 203
+L GGIP ++ P GCM++ +G + +TV V + + + +
Sbjct: 2715 YL----GGIPIAIRERFNISTPAFRGCMKNLKKTSGV-VRLNDTVGVTKKCSEDWKLVRS 2769
Query: 204 GSFYPGSGFAFYSL 217
SF G +F L
Sbjct: 2770 ASFSRGGQLSFTDL 2783
Score = 30.0 bits (66), Expect = 3.9
Identities = 34/124 (27%), Positives = 55/124 (44%), Gaps = 25/124 (20%)
Query: 41 LQPT-RLVAEFDFRTFDPEGILLFAGGHQDSTW---IVLALRAGRLELQLRYNGVGRVTS 96
L PT L A F F+TF P GILL HQ TW + + L G +EL +G +
Sbjct: 2785 LPPTDHLQASFGFQTFQPSGILL---DHQ--TWTRNLQVTLEDGYIELSTSDSG-SPIFK 2838
Query: 97 SGPVINHGMWQTISVEELARNLVIKVNRDAVMKIAVAGDLFQPERGLYHL-----NLTVG 151
S G+ +SV ++ ++ +++ + L + + L H+ +L +G
Sbjct: 2839 SPQTYMDGLLHYVSV----------ISDNSGLRLLIDDQLLRNSKRLKHISSSRQSLRLG 2888
Query: 152 GIPF 155
G F
Sbjct: 2889 GSNF 2892
>gi|189217428 laminin alpha 3 subunit isoform 4 [Homo sapiens]
Length = 1668
Score = 38.1 bits (87), Expect = 0.014
Identities = 90/398 (22%), Positives = 143/398 (35%), Gaps = 82/398 (20%)
Query: 28 FSGTPVIRLRFK---RLQPTRLVAEFDFRTFDPEGILLFAGGHQDSTWIVLALRAGRLEL 84
F P L FK L R D +T G++ G ++++ L L GRL
Sbjct: 1324 FGDIPTSHLLFKLPQELLKPRSQFAVDMQTTSSRGLVFHTG--TKNSFMALYLSKGRLVF 1381
Query: 85 QLRYNGVGRVTSSGPVINHGMWQTISVEELARNLVIKVNRDAVMKIAVAGDLFQPERGLY 144
L +G S N G W T+ V G E+G
Sbjct: 1382 ALGTDGKKLRIKSKEKCNDGKWHTV----------------------VFGH--DGEKG-- 1415
Query: 145 HLNLTVGGIPFHEKDLVQPINPRLDGCMRSWNWLNGEDTTIQETVKVNTRMQC---FSVT 201
L V G+ E L P N + +R+ +L + +++ N+ + C F +
Sbjct: 1416 --RLVVDGLRAREGSL--PGNSTIS--IRAPVYLGSPPSGKPKSLPTNSFVGCLKNFQLD 1469
Query: 202 ERGSFYPGSGFAFYSLDYMRTPLDVGTESTWE---------------VEVVAHIRPAADT 246
+ + P S F S + PL+ G + E ++V IRP + T
Sbjct: 1470 SKPLYTPSSSFGVSSC--LGGPLEKGIYFSEEGGHVVLAHSVLLGPEFKLVFSIRPRSLT 1527
Query: 247 GVLFALWAPDLRAVPLSVALVDYHSTKKLKKQLVVLAVEHTALALMEIKVCDGQEHVVTV 306
G+L + + + L Y K+ + A + + +CDGQ H V V
Sbjct: 1528 GILIHIGSQPGKH------LCVYLEAGKVTASMDSGAGGTSTSVTPKQSLCDGQWHSVAV 1581
Query: 307 SLRDGEATLEVDG----TRGQSEVSAAQLQERLAVLERHLRSPVLTFAGGLP-DVPVTSA 361
+++ LE+D T GQ A QE L HL GG P ++
Sbjct: 1582 TIKQHILHLELDTDSSYTAGQIPFPPASTQEPL-----HL--------GGAPANLTTLRI 1628
Query: 362 PVTAFYRGCM-TLEVNRRLLDLDEAAYKHSDITAHSCP 398
PV + GC+ + VN + + EA ++ + CP
Sbjct: 1629 PVWKSFFGCLRNIHVNHIPVPVTEALEVQGPVSLNGCP 1666
Score = 35.4 bits (80), Expect = 0.093
Identities = 46/194 (23%), Positives = 83/194 (42%), Gaps = 17/194 (8%)
Query: 28 FSGTPVIRLRFKRLQPTRLVAEFDFRTFDPEGILLFAGGHQDSTWIVLALRAGRLELQLR 87
F GT R+ + P + T D G+L FA +I L + G+L ++ +
Sbjct: 938 FEGTGYARVPTQPHAPIPTFGQTIQTTVD-RGLLFFA--ENGDRFISLNIEDGKLMVRYK 994
Query: 88 YNG-VGRVTSSGPVINHGMWQTISVE--ELARNLVIKVNRDAVMKIAVAGDLFQPERGLY 144
N + + G IN+G +I ++ +L + + I V+ V + G++F + Y
Sbjct: 995 LNSELPKERGVGDAINNGRDHSIQIKIGKLQKRMWINVD---VQNTIIDGEVF--DFSTY 1049
Query: 145 HLNLTVGGIPFHEKDLVQPINPRLDGCMRSWNWLNGEDTTIQETVKVNTR-MQCFSVTER 203
+L GGIP ++ P GCM++ +G + +TV V + + + +
Sbjct: 1050 YL----GGIPIAIRERFNISTPAFRGCMKNLKKTSGV-VRLNDTVGVTKKCSEDWKLVRS 1104
Query: 204 GSFYPGSGFAFYSL 217
SF G +F L
Sbjct: 1105 ASFSRGGQLSFTDL 1118
Score = 30.0 bits (66), Expect = 3.9
Identities = 34/124 (27%), Positives = 55/124 (44%), Gaps = 25/124 (20%)
Query: 41 LQPT-RLVAEFDFRTFDPEGILLFAGGHQDSTW---IVLALRAGRLELQLRYNGVGRVTS 96
L PT L A F F+TF P GILL HQ TW + + L G +EL +G +
Sbjct: 1120 LPPTDHLQASFGFQTFQPSGILL---DHQ--TWTRNLQVTLEDGYIELSTSDSG-SPIFK 1173
Query: 97 SGPVINHGMWQTISVEELARNLVIKVNRDAVMKIAVAGDLFQPERGLYHL-----NLTVG 151
S G+ +SV ++ ++ +++ + L + + L H+ +L +G
Sbjct: 1174 SPQTYMDGLLHYVSV----------ISDNSGLRLLIDDQLLRNSKRLKHISSSRQSLRLG 1223
Query: 152 GIPF 155
G F
Sbjct: 1224 GSNF 1227
>gi|189217425 laminin alpha 3 subunit isoform 3 [Homo sapiens]
Length = 3277
Score = 38.1 bits (87), Expect = 0.014
Identities = 90/398 (22%), Positives = 143/398 (35%), Gaps = 82/398 (20%)
Query: 28 FSGTPVIRLRFK---RLQPTRLVAEFDFRTFDPEGILLFAGGHQDSTWIVLALRAGRLEL 84
F P L FK L R D +T G++ G ++++ L L GRL
Sbjct: 2933 FGDIPTSHLLFKLPQELLKPRSQFAVDMQTTSSRGLVFHTG--TKNSFMALYLSKGRLVF 2990
Query: 85 QLRYNGVGRVTSSGPVINHGMWQTISVEELARNLVIKVNRDAVMKIAVAGDLFQPERGLY 144
L +G S N G W T+ V G E+G
Sbjct: 2991 ALGTDGKKLRIKSKEKCNDGKWHTV----------------------VFGH--DGEKG-- 3024
Query: 145 HLNLTVGGIPFHEKDLVQPINPRLDGCMRSWNWLNGEDTTIQETVKVNTRMQC---FSVT 201
L V G+ E L P N + +R+ +L + +++ N+ + C F +
Sbjct: 3025 --RLVVDGLRAREGSL--PGNSTIS--IRAPVYLGSPPSGKPKSLPTNSFVGCLKNFQLD 3078
Query: 202 ERGSFYPGSGFAFYSLDYMRTPLDVGTESTWE---------------VEVVAHIRPAADT 246
+ + P S F S + PL+ G + E ++V IRP + T
Sbjct: 3079 SKPLYTPSSSFGVSSC--LGGPLEKGIYFSEEGGHVVLAHSVLLGPEFKLVFSIRPRSLT 3136
Query: 247 GVLFALWAPDLRAVPLSVALVDYHSTKKLKKQLVVLAVEHTALALMEIKVCDGQEHVVTV 306
G+L + + + L Y K+ + A + + +CDGQ H V V
Sbjct: 3137 GILIHIGSQPGKH------LCVYLEAGKVTASMDSGAGGTSTSVTPKQSLCDGQWHSVAV 3190
Query: 307 SLRDGEATLEVDG----TRGQSEVSAAQLQERLAVLERHLRSPVLTFAGGLP-DVPVTSA 361
+++ LE+D T GQ A QE L HL GG P ++
Sbjct: 3191 TIKQHILHLELDTDSSYTAGQIPFPPASTQEPL-----HL--------GGAPANLTTLRI 3237
Query: 362 PVTAFYRGCM-TLEVNRRLLDLDEAAYKHSDITAHSCP 398
PV + GC+ + VN + + EA ++ + CP
Sbjct: 3238 PVWKSFFGCLRNIHVNHIPVPVTEALEVQGPVSLNGCP 3275
Score = 35.4 bits (80), Expect = 0.093
Identities = 46/194 (23%), Positives = 83/194 (42%), Gaps = 17/194 (8%)
Query: 28 FSGTPVIRLRFKRLQPTRLVAEFDFRTFDPEGILLFAGGHQDSTWIVLALRAGRLELQLR 87
F GT R+ + P + T D G+L FA +I L + G+L ++ +
Sbjct: 2547 FEGTGYARVPTQPHAPIPTFGQTIQTTVD-RGLLFFA--ENGDRFISLNIEDGKLMVRYK 2603
Query: 88 YNG-VGRVTSSGPVINHGMWQTISVE--ELARNLVIKVNRDAVMKIAVAGDLFQPERGLY 144
N + + G IN+G +I ++ +L + + I V+ V + G++F + Y
Sbjct: 2604 LNSELPKERGVGDAINNGRDHSIQIKIGKLQKRMWINVD---VQNTIIDGEVF--DFSTY 2658
Query: 145 HLNLTVGGIPFHEKDLVQPINPRLDGCMRSWNWLNGEDTTIQETVKVNTR-MQCFSVTER 203
+L GGIP ++ P GCM++ +G + +TV V + + + +
Sbjct: 2659 YL----GGIPIAIRERFNISTPAFRGCMKNLKKTSGV-VRLNDTVGVTKKCSEDWKLVRS 2713
Query: 204 GSFYPGSGFAFYSL 217
SF G +F L
Sbjct: 2714 ASFSRGGQLSFTDL 2727
Score = 30.0 bits (66), Expect = 3.9
Identities = 34/124 (27%), Positives = 55/124 (44%), Gaps = 25/124 (20%)
Query: 41 LQPT-RLVAEFDFRTFDPEGILLFAGGHQDSTW---IVLALRAGRLELQLRYNGVGRVTS 96
L PT L A F F+TF P GILL HQ TW + + L G +EL +G +
Sbjct: 2729 LPPTDHLQASFGFQTFQPSGILL---DHQ--TWTRNLQVTLEDGYIELSTSDSG-SPIFK 2782
Query: 97 SGPVINHGMWQTISVEELARNLVIKVNRDAVMKIAVAGDLFQPERGLYHL-----NLTVG 151
S G+ +SV ++ ++ +++ + L + + L H+ +L +G
Sbjct: 2783 SPQTYMDGLLHYVSV----------ISDNSGLRLLIDDQLLRNSKRLKHISSSRQSLRLG 2832
Query: 152 GIPF 155
G F
Sbjct: 2833 GSNF 2836
>gi|38045908 laminin alpha 3 subunit isoform 2 [Homo sapiens]
Length = 1724
Score = 38.1 bits (87), Expect = 0.014
Identities = 90/398 (22%), Positives = 143/398 (35%), Gaps = 82/398 (20%)
Query: 28 FSGTPVIRLRFK---RLQPTRLVAEFDFRTFDPEGILLFAGGHQDSTWIVLALRAGRLEL 84
F P L FK L R D +T G++ G ++++ L L GRL
Sbjct: 1380 FGDIPTSHLLFKLPQELLKPRSQFAVDMQTTSSRGLVFHTG--TKNSFMALYLSKGRLVF 1437
Query: 85 QLRYNGVGRVTSSGPVINHGMWQTISVEELARNLVIKVNRDAVMKIAVAGDLFQPERGLY 144
L +G S N G W T+ V G E+G
Sbjct: 1438 ALGTDGKKLRIKSKEKCNDGKWHTV----------------------VFGH--DGEKG-- 1471
Query: 145 HLNLTVGGIPFHEKDLVQPINPRLDGCMRSWNWLNGEDTTIQETVKVNTRMQC---FSVT 201
L V G+ E L P N + +R+ +L + +++ N+ + C F +
Sbjct: 1472 --RLVVDGLRAREGSL--PGNSTIS--IRAPVYLGSPPSGKPKSLPTNSFVGCLKNFQLD 1525
Query: 202 ERGSFYPGSGFAFYSLDYMRTPLDVGTESTWE---------------VEVVAHIRPAADT 246
+ + P S F S + PL+ G + E ++V IRP + T
Sbjct: 1526 SKPLYTPSSSFGVSSC--LGGPLEKGIYFSEEGGHVVLAHSVLLGPEFKLVFSIRPRSLT 1583
Query: 247 GVLFALWAPDLRAVPLSVALVDYHSTKKLKKQLVVLAVEHTALALMEIKVCDGQEHVVTV 306
G+L + + + L Y K+ + A + + +CDGQ H V V
Sbjct: 1584 GILIHIGSQPGKH------LCVYLEAGKVTASMDSGAGGTSTSVTPKQSLCDGQWHSVAV 1637
Query: 307 SLRDGEATLEVDG----TRGQSEVSAAQLQERLAVLERHLRSPVLTFAGGLP-DVPVTSA 361
+++ LE+D T GQ A QE L HL GG P ++
Sbjct: 1638 TIKQHILHLELDTDSSYTAGQIPFPPASTQEPL-----HL--------GGAPANLTTLRI 1684
Query: 362 PVTAFYRGCM-TLEVNRRLLDLDEAAYKHSDITAHSCP 398
PV + GC+ + VN + + EA ++ + CP
Sbjct: 1685 PVWKSFFGCLRNIHVNHIPVPVTEALEVQGPVSLNGCP 1722
Score = 35.4 bits (80), Expect = 0.093
Identities = 46/194 (23%), Positives = 83/194 (42%), Gaps = 17/194 (8%)
Query: 28 FSGTPVIRLRFKRLQPTRLVAEFDFRTFDPEGILLFAGGHQDSTWIVLALRAGRLELQLR 87
F GT R+ + P + T D G+L FA +I L + G+L ++ +
Sbjct: 994 FEGTGYARVPTQPHAPIPTFGQTIQTTVD-RGLLFFA--ENGDRFISLNIEDGKLMVRYK 1050
Query: 88 YNG-VGRVTSSGPVINHGMWQTISVE--ELARNLVIKVNRDAVMKIAVAGDLFQPERGLY 144
N + + G IN+G +I ++ +L + + I V+ V + G++F + Y
Sbjct: 1051 LNSELPKERGVGDAINNGRDHSIQIKIGKLQKRMWINVD---VQNTIIDGEVF--DFSTY 1105
Query: 145 HLNLTVGGIPFHEKDLVQPINPRLDGCMRSWNWLNGEDTTIQETVKVNTR-MQCFSVTER 203
+L GGIP ++ P GCM++ +G + +TV V + + + +
Sbjct: 1106 YL----GGIPIAIRERFNISTPAFRGCMKNLKKTSGV-VRLNDTVGVTKKCSEDWKLVRS 1160
Query: 204 GSFYPGSGFAFYSL 217
SF G +F L
Sbjct: 1161 ASFSRGGQLSFTDL 1174
Score = 30.0 bits (66), Expect = 3.9
Identities = 34/124 (27%), Positives = 55/124 (44%), Gaps = 25/124 (20%)
Query: 41 LQPT-RLVAEFDFRTFDPEGILLFAGGHQDSTW---IVLALRAGRLELQLRYNGVGRVTS 96
L PT L A F F+TF P GILL HQ TW + + L G +EL +G +
Sbjct: 1176 LPPTDHLQASFGFQTFQPSGILL---DHQ--TWTRNLQVTLEDGYIELSTSDSG-SPIFK 1229
Query: 97 SGPVINHGMWQTISVEELARNLVIKVNRDAVMKIAVAGDLFQPERGLYHL-----NLTVG 151
S G+ +SV ++ ++ +++ + L + + L H+ +L +G
Sbjct: 1230 SPQTYMDGLLHYVSV----------ISDNSGLRLLIDDQLLRNSKRLKHISSSRQSLRLG 1279
Query: 152 GIPF 155
G F
Sbjct: 1280 GSNF 1283
>gi|208609951 neurexin 1 isoform alpha2 precursor [Homo sapiens]
Length = 1547
Score = 37.7 bits (86), Expect = 0.019
Identities = 40/165 (24%), Positives = 72/165 (43%), Gaps = 27/165 (16%)
Query: 50 FDFRTFDPEGILLFAGG---HQDST---------WIVLALRAGRLELQLRY-NGVGRVTS 96
FDFRT +P G++LF+ G HQ + + + G L L L +G ++ +
Sbjct: 546 FDFRTTEPNGLILFSHGKPRHQKDAKHPQMIKVDFFAIEMLDGHLYLLLDMGSGTIKIKA 605
Query: 97 SGPVINHGMWQTISVEELARNLVIKVNRDAVMKIAVA-GDLFQPERGLYHLNLTVGGIPF 155
+N G W + + R+ I VN A ++ + LY +GG+P
Sbjct: 606 LLKKVNDGEWYHVDFQRDGRSGTISVNTLRTPYTAPGESEILDLDDELY-----LGGLPE 660
Query: 156 HEKDLVQP-------INPRLDGCMRSWNWLNGEDTTIQETVKVNT 193
++ LV P +N GC+R +++G+ I++ +V +
Sbjct: 661 NKAGLVFPTEVWTALLNYGYVGCIRDL-FIDGQSKDIRQMAEVQS 704
Score = 30.0 bits (66), Expect = 3.9
Identities = 25/94 (26%), Positives = 43/94 (45%), Gaps = 11/94 (11%)
Query: 52 FRTFDPEGILLFAGGHQDSTWIVLALRAGRLELQLRYNGVGRV---TSSGPV-------I 101
FR+ GIL+ + + L L AGR++L + + + R+ +S GP +
Sbjct: 786 FRSQRAYGILMATTSRDSADTLRLELDAGRVKLTVNLDCI-RINCNSSKGPETLFAGYNL 844
Query: 102 NHGMWQTISVEELARNLVIKVNRDAVMKIAVAGD 135
N W T+ V ++L + V+ M +AGD
Sbjct: 845 NDNEWHTVRVVRRGKSLKLTVDDQQAMTGQMAGD 878
>gi|14149613 neurexin 1 isoform alpha1 precursor [Homo sapiens]
Length = 1477
Score = 37.7 bits (86), Expect = 0.019
Identities = 40/165 (24%), Positives = 72/165 (43%), Gaps = 27/165 (16%)
Query: 50 FDFRTFDPEGILLFAGG---HQDST---------WIVLALRAGRLELQLRY-NGVGRVTS 96
FDFRT +P G++LF+ G HQ + + + G L L L +G ++ +
Sbjct: 506 FDFRTTEPNGLILFSHGKPRHQKDAKHPQMIKVDFFAIEMLDGHLYLLLDMGSGTIKIKA 565
Query: 97 SGPVINHGMWQTISVEELARNLVIKVNRDAVMKIAVA-GDLFQPERGLYHLNLTVGGIPF 155
+N G W + + R+ I VN A ++ + LY +GG+P
Sbjct: 566 LLKKVNDGEWYHVDFQRDGRSGTISVNTLRTPYTAPGESEILDLDDELY-----LGGLPE 620
Query: 156 HEKDLVQP-------INPRLDGCMRSWNWLNGEDTTIQETVKVNT 193
++ LV P +N GC+R +++G+ I++ +V +
Sbjct: 621 NKAGLVFPTEVWTALLNYGYVGCIRDL-FIDGQSKDIRQMAEVQS 664
Score = 30.0 bits (66), Expect = 3.9
Identities = 25/94 (26%), Positives = 43/94 (45%), Gaps = 11/94 (11%)
Query: 52 FRTFDPEGILLFAGGHQDSTWIVLALRAGRLELQLRYNGVGRV---TSSGPV-------I 101
FR+ GIL+ + + L L AGR++L + + + R+ +S GP +
Sbjct: 746 FRSQRAYGILMATTSRDSADTLRLELDAGRVKLTVNLDCI-RINCNSSKGPETLFAGYNL 804
Query: 102 NHGMWQTISVEELARNLVIKVNRDAVMKIAVAGD 135
N W T+ V ++L + V+ M +AGD
Sbjct: 805 NDNEWHTVRVVRRGKSLKLTVDDQQAMTGQMAGD 838
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.322 0.137 0.413
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,034,436
Number of Sequences: 37866
Number of extensions: 629523
Number of successful extensions: 1336
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 32
Number of HSP's that attempted gapping in prelim test: 1214
Number of HSP's gapped (non-prelim): 127
length of query: 405
length of database: 18,247,518
effective HSP length: 105
effective length of query: 300
effective length of database: 14,271,588
effective search space: 4281476400
effective search space used: 4281476400
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.