Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 221316602
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|221316602 peroxisomal carnitine O-octanoyltransferase
isoform 1 [Homo sapiens]
(640 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|221316602 peroxisomal carnitine O-octanoyltransferase isoform... 1321 0.0
gi|31542325 peroxisomal carnitine O-octanoyltransferase isoform ... 1249 0.0
gi|21618331 carnitine acetyltransferase precursor [Homo sapiens] 279 5e-75
gi|188595668 choline acetyltransferase isoform 1 [Homo sapiens] 246 4e-65
gi|218931226 choline acetyltransferase isoform 1 [Homo sapiens] 246 4e-65
gi|218931224 choline acetyltransferase isoform 3 [Homo sapiens] 246 4e-65
gi|218931221 choline acetyltransferase isoform 1 [Homo sapiens] 246 4e-65
gi|188595684 choline acetyltransferase isoform 1 [Homo sapiens] 246 4e-65
gi|188595672 choline acetyltransferase isoform 1 [Homo sapiens] 246 4e-65
gi|188595670 choline acetyltransferase isoform 2 [Homo sapiens] 246 4e-65
gi|73623030 carnitine palmitoyltransferase 1A liver isoform 1 [H... 229 6e-60
gi|73623028 carnitine palmitoyltransferase 1A liver isoform 2 [H... 224 1e-58
gi|4503023 carnitine O-palmitoyltransferase precursor [Homo sapi... 222 9e-58
gi|223468672 carnitine palmitoyltransferase 1B isoform a [Homo s... 211 2e-54
gi|23238254 carnitine palmitoyltransferase 1B isoform a [Homo sa... 211 2e-54
gi|223468678 carnitine palmitoyltransferase 1B isoform a [Homo s... 211 2e-54
gi|4758050 carnitine palmitoyltransferase 1B isoform a [Homo sap... 211 2e-54
gi|23238256 carnitine palmitoyltransferase 1B isoform a [Homo sa... 211 2e-54
gi|209862905 carnitine palmitoyltransferase 1C isoform 1 [Homo s... 199 7e-51
gi|22748777 carnitine palmitoyltransferase 1C isoform 2 [Homo sa... 198 1e-50
gi|223468670 carnitine palmitoyltransferase 1B isoform c [Homo s... 197 3e-50
gi|223468674 carnitine palmitoyltransferase 1B isoform d [Homo s... 127 3e-29
gi|38202205 zinc finger, FYVE domain containing 26 [Homo sapiens] 33 0.62
gi|237858621 polyamine modulated factor 1 binding protein 1 isof... 32 1.8
gi|91208426 U5 snRNP-specific protein [Homo sapiens] 32 1.8
gi|20127408 mitochondrial trifunctional protein, alpha subunit p... 32 1.8
gi|132814467 glutamyl aminopeptidase [Homo sapiens] 31 4.0
gi|4505245 mannose receptor C type 1 precursor [Homo sapiens] 30 5.2
gi|57546917 mannose receptor, C type 1-like 1 [Homo sapiens] 30 5.2
gi|117968420 NUF2, NDC80 kinetochore complex component [Homo sap... 30 8.9
>gi|221316602 peroxisomal carnitine O-octanoyltransferase isoform 1
[Homo sapiens]
Length = 640
Score = 1321 bits (3418), Expect = 0.0
Identities = 640/640 (100%), Positives = 640/640 (100%)
Query: 1 MENQLAKSTEERTFQYQDSLPSLPVPSLEESLKKYLESVTRTCYQIRGLDPDAKRGFLDL 60
MENQLAKSTEERTFQYQDSLPSLPVPSLEESLKKYLESVTRTCYQIRGLDPDAKRGFLDL
Sbjct: 1 MENQLAKSTEERTFQYQDSLPSLPVPSLEESLKKYLESVTRTCYQIRGLDPDAKRGFLDL 60
Query: 61 TREGIQVKPFANQEEYKKTEEIVQKFQSGIGEKLHQKLLERAKGKRNWLEEWWLNVAYLD 120
TREGIQVKPFANQEEYKKTEEIVQKFQSGIGEKLHQKLLERAKGKRNWLEEWWLNVAYLD
Sbjct: 61 TREGIQVKPFANQEEYKKTEEIVQKFQSGIGEKLHQKLLERAKGKRNWLEEWWLNVAYLD 120
Query: 121 VRIPSQLNVNFAGPAAHFEHYWPPKEGTQLERGSITLWHNLNYWQLLRKEKVPVHKVGNT 180
VRIPSQLNVNFAGPAAHFEHYWPPKEGTQLERGSITLWHNLNYWQLLRKEKVPVHKVGNT
Sbjct: 121 VRIPSQLNVNFAGPAAHFEHYWPPKEGTQLERGSITLWHNLNYWQLLRKEKVPVHKVGNT 180
Query: 181 PLDMNQFRMLFSTCKVPGITRDSIMNYFRTESEGRSPNHIVVLCRGRAFVFDVIHEGCLV 240
PLDMNQFRMLFSTCKVPGITRDSIMNYFRTESEGRSPNHIVVLCRGRAFVFDVIHEGCLV
Sbjct: 181 PLDMNQFRMLFSTCKVPGITRDSIMNYFRTESEGRSPNHIVVLCRGRAFVFDVIHEGCLV 240
Query: 241 TPPELLRQLTYIHKKCHSEPDGPGIAALTSEERTRWAKAREYLIGLDPENLALLEKIQSS 300
TPPELLRQLTYIHKKCHSEPDGPGIAALTSEERTRWAKAREYLIGLDPENLALLEKIQSS
Sbjct: 241 TPPELLRQLTYIHKKCHSEPDGPGIAALTSEERTRWAKAREYLIGLDPENLALLEKIQSS 300
Query: 301 LLVYSMEDSSPHVTPEDYSEIIAAILIGDPTVRWGDKSYNLISFSNGVFGCNCDHAPFDA 360
LLVYSMEDSSPHVTPEDYSEIIAAILIGDPTVRWGDKSYNLISFSNGVFGCNCDHAPFDA
Sbjct: 301 LLVYSMEDSSPHVTPEDYSEIIAAILIGDPTVRWGDKSYNLISFSNGVFGCNCDHAPFDA 360
Query: 361 MIMVNISYYVDEKIFQNEGRWKGSEKVRDIPLPEELIFIVDEKVLNDINQAKAQYLREAS 420
MIMVNISYYVDEKIFQNEGRWKGSEKVRDIPLPEELIFIVDEKVLNDINQAKAQYLREAS
Sbjct: 361 MIMVNISYYVDEKIFQNEGRWKGSEKVRDIPLPEELIFIVDEKVLNDINQAKAQYLREAS 420
Query: 421 DLQIAAYAFTSFGKKLTKNKMLHPDTFIQLALQLAYYRLHGHPGCCYETAMTRHFYHGRT 480
DLQIAAYAFTSFGKKLTKNKMLHPDTFIQLALQLAYYRLHGHPGCCYETAMTRHFYHGRT
Sbjct: 421 DLQIAAYAFTSFGKKLTKNKMLHPDTFIQLALQLAYYRLHGHPGCCYETAMTRHFYHGRT 480
Query: 481 ETMRSCTVEAVRWCQSMQDPSVNLRERQQKMLQAFAKHNKMMKDCSAGKGFDRHLLGLLL 540
ETMRSCTVEAVRWCQSMQDPSVNLRERQQKMLQAFAKHNKMMKDCSAGKGFDRHLLGLLL
Sbjct: 481 ETMRSCTVEAVRWCQSMQDPSVNLRERQQKMLQAFAKHNKMMKDCSAGKGFDRHLLGLLL 540
Query: 541 IAKEEGLPVPELFTDPLFSKSGGGGNFVLSTSLVGYLRVQGVVVPMVHNGYGFFYHIRDD 600
IAKEEGLPVPELFTDPLFSKSGGGGNFVLSTSLVGYLRVQGVVVPMVHNGYGFFYHIRDD
Sbjct: 541 IAKEEGLPVPELFTDPLFSKSGGGGNFVLSTSLVGYLRVQGVVVPMVHNGYGFFYHIRDD 600
Query: 601 RFVVACSAWKSCPETDAEKLVQLTFCAFHDMIQLMNSTHL 640
RFVVACSAWKSCPETDAEKLVQLTFCAFHDMIQLMNSTHL
Sbjct: 601 RFVVACSAWKSCPETDAEKLVQLTFCAFHDMIQLMNSTHL 640
>gi|31542325 peroxisomal carnitine O-octanoyltransferase isoform 2
[Homo sapiens]
Length = 612
Score = 1249 bits (3231), Expect = 0.0
Identities = 612/640 (95%), Positives = 612/640 (95%), Gaps = 28/640 (4%)
Query: 1 MENQLAKSTEERTFQYQDSLPSLPVPSLEESLKKYLESVTRTCYQIRGLDPDAKRGFLDL 60
MENQLAKSTEERTFQYQDSLPSLPVPSLEESLKKYLESV
Sbjct: 1 MENQLAKSTEERTFQYQDSLPSLPVPSLEESLKKYLESV--------------------- 39
Query: 61 TREGIQVKPFANQEEYKKTEEIVQKFQSGIGEKLHQKLLERAKGKRNWLEEWWLNVAYLD 120
KPFANQEEYKKTEEIVQKFQSGIGEKLHQKLLERAKGKRNWLEEWWLNVAYLD
Sbjct: 40 -------KPFANQEEYKKTEEIVQKFQSGIGEKLHQKLLERAKGKRNWLEEWWLNVAYLD 92
Query: 121 VRIPSQLNVNFAGPAAHFEHYWPPKEGTQLERGSITLWHNLNYWQLLRKEKVPVHKVGNT 180
VRIPSQLNVNFAGPAAHFEHYWPPKEGTQLERGSITLWHNLNYWQLLRKEKVPVHKVGNT
Sbjct: 93 VRIPSQLNVNFAGPAAHFEHYWPPKEGTQLERGSITLWHNLNYWQLLRKEKVPVHKVGNT 152
Query: 181 PLDMNQFRMLFSTCKVPGITRDSIMNYFRTESEGRSPNHIVVLCRGRAFVFDVIHEGCLV 240
PLDMNQFRMLFSTCKVPGITRDSIMNYFRTESEGRSPNHIVVLCRGRAFVFDVIHEGCLV
Sbjct: 153 PLDMNQFRMLFSTCKVPGITRDSIMNYFRTESEGRSPNHIVVLCRGRAFVFDVIHEGCLV 212
Query: 241 TPPELLRQLTYIHKKCHSEPDGPGIAALTSEERTRWAKAREYLIGLDPENLALLEKIQSS 300
TPPELLRQLTYIHKKCHSEPDGPGIAALTSEERTRWAKAREYLIGLDPENLALLEKIQSS
Sbjct: 213 TPPELLRQLTYIHKKCHSEPDGPGIAALTSEERTRWAKAREYLIGLDPENLALLEKIQSS 272
Query: 301 LLVYSMEDSSPHVTPEDYSEIIAAILIGDPTVRWGDKSYNLISFSNGVFGCNCDHAPFDA 360
LLVYSMEDSSPHVTPEDYSEIIAAILIGDPTVRWGDKSYNLISFSNGVFGCNCDHAPFDA
Sbjct: 273 LLVYSMEDSSPHVTPEDYSEIIAAILIGDPTVRWGDKSYNLISFSNGVFGCNCDHAPFDA 332
Query: 361 MIMVNISYYVDEKIFQNEGRWKGSEKVRDIPLPEELIFIVDEKVLNDINQAKAQYLREAS 420
MIMVNISYYVDEKIFQNEGRWKGSEKVRDIPLPEELIFIVDEKVLNDINQAKAQYLREAS
Sbjct: 333 MIMVNISYYVDEKIFQNEGRWKGSEKVRDIPLPEELIFIVDEKVLNDINQAKAQYLREAS 392
Query: 421 DLQIAAYAFTSFGKKLTKNKMLHPDTFIQLALQLAYYRLHGHPGCCYETAMTRHFYHGRT 480
DLQIAAYAFTSFGKKLTKNKMLHPDTFIQLALQLAYYRLHGHPGCCYETAMTRHFYHGRT
Sbjct: 393 DLQIAAYAFTSFGKKLTKNKMLHPDTFIQLALQLAYYRLHGHPGCCYETAMTRHFYHGRT 452
Query: 481 ETMRSCTVEAVRWCQSMQDPSVNLRERQQKMLQAFAKHNKMMKDCSAGKGFDRHLLGLLL 540
ETMRSCTVEAVRWCQSMQDPSVNLRERQQKMLQAFAKHNKMMKDCSAGKGFDRHLLGLLL
Sbjct: 453 ETMRSCTVEAVRWCQSMQDPSVNLRERQQKMLQAFAKHNKMMKDCSAGKGFDRHLLGLLL 512
Query: 541 IAKEEGLPVPELFTDPLFSKSGGGGNFVLSTSLVGYLRVQGVVVPMVHNGYGFFYHIRDD 600
IAKEEGLPVPELFTDPLFSKSGGGGNFVLSTSLVGYLRVQGVVVPMVHNGYGFFYHIRDD
Sbjct: 513 IAKEEGLPVPELFTDPLFSKSGGGGNFVLSTSLVGYLRVQGVVVPMVHNGYGFFYHIRDD 572
Query: 601 RFVVACSAWKSCPETDAEKLVQLTFCAFHDMIQLMNSTHL 640
RFVVACSAWKSCPETDAEKLVQLTFCAFHDMIQLMNSTHL
Sbjct: 573 RFVVACSAWKSCPETDAEKLVQLTFCAFHDMIQLMNSTHL 612
>gi|21618331 carnitine acetyltransferase precursor [Homo sapiens]
Length = 626
Score = 279 bits (714), Expect = 5e-75
Identities = 200/637 (31%), Positives = 317/637 (49%), Gaps = 62/637 (9%)
Query: 16 YQDSLPSLPVPSLEESLKKYLESVTRTCYQIRGLDPDAKRGFLDLTREGIQVKPFANQEE 75
+QD+LP LPVP L++SL YL+++ +P ++EE
Sbjct: 31 HQDALPRLPVPPLQQSLDHYLKAL----------------------------QPIVSEEE 62
Query: 76 YKKTEEIVQKFQS--GIGEKLHQKLLERAKGKRNWLEEWWLNVAYLDVRIPSQLNVNFAG 133
+ T+++V +FQ+ G+GE+L + L RA+ NWL EWWL AYL R P V ++
Sbjct: 63 WAHTKQLVDEFQASGGVGERLQKGLERRARKTENWLSEWWLKTAYLQYRQPV---VIYSS 119
Query: 134 PAAHFEHYWPPKEGTQLERGSITLWHNLNYWQLLRKEKVPVHKVGNTPLDMNQFRMLFST 193
P QL + + L++ ++ E +PV +G PL MNQ+ + S+
Sbjct: 120 PGVMLPKQDFVDLQGQLRFAAKLIEGVLDFKVMIDNETLPVEYLGGKPLCMNQYYQILSS 179
Query: 194 CKVPGITRDSIMNYFRTESEGRSPNHIVVLCRGRAFVFDVIH-EGCLVTPPELLRQLTYI 252
C+VPG +D++ N+ +T+ + P HI V+ + F DV H +G +T ++ QL I
Sbjct: 180 CRVPGPKQDTVSNFSKTK---KPPTHITVVHNYQFFELDVYHSDGTPLTADQIFVQLEKI 236
Query: 253 HKKCHSEPDGPGIAALTSEERTRWAKAREYLIGLDPENLALLEKIQSSLLVYSMEDSSPH 312
P + LTS R WAKA LI D N + IQ S+ ++ + P
Sbjct: 237 WNSSLQTNKEP-VGILTSNHRNSWAKAYNTLIK-DKVNRDSVRSIQKSIFTVCLDATMPR 294
Query: 313 VTPEDYSEIIAAILIG------DPTVRWGDKSYNLISFSNGVFGCNCDHAPFDAMIMVNI 366
V+ + Y +A ++ + RW DK+ I +G G +HA + +V +
Sbjct: 295 VSEDVYRSHVAGQMLHGGGSRLNSGNRWFDKTLQFIVAEDGSCGLVYEHAAAEGPPIVTL 354
Query: 367 SYYVDEKIFQNEGRWKGSEKVRD----IPLPEELIFIVDEKVLNDINQAKAQYLREASDL 422
YV E K E VR +P+P++L F + ++ +DI +AK DL
Sbjct: 355 LDYVIEYT-------KKPELVRSPMVPLPMPKKLRFNITPEIKSDIEKAKQNLSIMIQDL 407
Query: 423 QIAAYAFTSFGKKLTKNKMLHPDTFIQLALQLAYYRLHGHPGCCYETAMTRHFYHGRTET 482
I F FGK K++ L PD FIQ+ALQLAYYR++G YE+A R F+ GRT+T
Sbjct: 408 DITVMVFHHFGKDFPKSEKLSPDAFIQMALQLAYYRIYGQACATYESASLRMFHLGRTDT 467
Query: 483 MRSCTVEAVRWCQSMQDPSVNLRERQQKMLQAFAKHNKMMKDCSAGKGFDRHLLGLLLIA 542
+RS +++++ + ++M D SV ++ + + +A H G+ FDRHLLGL L A
Sbjct: 468 IRSASMDSLTFVKAMDDSSVTEHQKVELLRKAVQAHRGYTDRAIRGEAFDRHLLGLKLQA 527
Query: 543 KEEGLPVPELFTDPLFSKSGGGGNFVLSTSLVGYLRVQGVVV--PMVHNGYGFFYHIRDD 600
E+ + +P++F D ++ + +F LSTS V + V+ P+V +GYG Y+ +
Sbjct: 528 IEDLVSMPDIFMDTSYAIA---MHFHLSTSQVP-AKTDCVMFFGPVVPDGYGVCYNPMEA 583
Query: 601 RFVVACSAWKSCPETDAEKLVQLTFCAFHDMIQLMNS 637
+ SA+ SC ET+A +L A DM L+ S
Sbjct: 584 HINFSLSAYNSCAETNAARLAHYLEKALLDMRALLQS 620
>gi|188595668 choline acetyltransferase isoform 1 [Homo sapiens]
Length = 630
Score = 246 bits (629), Expect = 4e-65
Identities = 182/632 (28%), Positives = 299/632 (47%), Gaps = 52/632 (8%)
Query: 17 QDSLPSLPVPSLEESLKKYLESVTRTCYQIRGLDPDAKRGFLDLTREGIQVKPFANQEEY 76
+ LP LPVP L+++L YL+ + + ++E++
Sbjct: 10 ESGLPKLPVPPLQQTLATYLQCM----------------------------RHLVSEEQF 41
Query: 77 KKTEEIVQKFQS--GIGEKLHQKLLERAKGKRNWLEEWWLNVAYLDVRIPSQLNVNFAGP 134
+K++ IVQ+F + G+GE L QKLLER + NW+ E+WLN YL+ R+ +N + P
Sbjct: 42 RKSQAIVQQFGAPGGLGETLQQKLLERQEKTANWVSEYWLNDMYLNNRLALPVN---SSP 98
Query: 135 AAHFEHYWPPKEGTQLERGSITLWHNLNYWQLLRKEKVPVH----KVGNTPLDMNQFRML 190
A F P QL + + L+Y LL +P ++ PL M Q+ L
Sbjct: 99 AVIFARQHFPGTDDQLRFAASLISGVLSYKALLDSHSIPTDCAKGQLSGQPLCMKQYYGL 158
Query: 191 FSTCKVPGITRDSIMNYFRTESEGRSPNHIVVLCRGRAFVFDVIHEGCLVTPPELLRQLT 250
FS+ ++PG T+D+++ + S P H++V C + FV DV+ ++ +L QL
Sbjct: 159 FSSYRLPGHTQDTLVA--QNSSIMPEPEHVIVACCNQFFVLDVVINFRRLSEGDLFTQLR 216
Query: 251 YIHKKCHSEPDG-PGIAALTSEERTRWAKAREYLIGLDPENLALLEKIQSSLLVYSMEDS 309
I K +E + P I LTS+ R+ WA+AR L+ D N L+ I+ + + + D+
Sbjct: 217 KIVKMASNEDERLPPIGLLTSDGRSEWAEARTVLVK-DSTNRDSLDMIERCICLVCL-DA 274
Query: 310 SPHVTPEDYSEIIAAILIG----DPTVRWGDKSYNLISFSNGVFGCNCDHAPFDAMIMVN 365
V D + + G + RW DKS + +G G C+H+PFD +++V
Sbjct: 275 PGGVELSDTHRALQLLHGGGYSKNGANRWYDKSLQFVVGRDGTCGVVCEHSPFDGIVLVQ 334
Query: 366 ISYYVDEKIFQNEGRWKGSEKVRDIPLPEELIFIVDEKVLNDINQAKAQYLREASDLQIA 425
+ ++ + + Q+ + ++ V ++P P L + ++ + + + R +L
Sbjct: 335 CTEHLLKHMTQSSRKLIRADSVSELPAPRRLRWKCSPEIQGHLASSAEKLQRIVKNLDFI 394
Query: 426 AYAFTSFGKKLTKNKMLHPDTFIQLALQLAYYRLHGHPGCCYETAMTRHFYHGRTETMRS 485
Y F ++GK K + PD FIQ+ALQLA+YRLH YE+A R F GR + +RS
Sbjct: 395 VYKFDNYGKTFIKKQKCSPDAFIQVALQLAFYRLHRRLVPTYESASIRRFQEGRVDNIRS 454
Query: 486 CTVEAVRWCQSMQD--PSVNLRERQQKMLQAFAKHNKMMKDCSAGKGFDRHLLGLLLIAK 543
T EA+ + +++ D +V E+ + A G D HLL L +A+
Sbjct: 455 ATPEALAFVRAVTDHKAAVPASEKLLLLKDAIRAQTAYTVMAITGMAIDNHLLALRELAR 514
Query: 544 EEGLPVPELFTDPLFSKSGGGGNFVLSTSLVGYLRVQGVVV-PMVHNGYGFFYHIRDDRF 602
+PE+F D + S FVLSTS V P+V NGYG Y+ + +
Sbjct: 515 AMCKELPEMFMDETYLMS---NRFVLSTSQVPTTTEMFCCYGPVVPNGYGACYNPQPETI 571
Query: 603 VVACSAWKSCPETDAEKLVQLTFCAFHDMIQL 634
+ S++ SC ET + K + + DM L
Sbjct: 572 LFCISSFHSCKETSSSKFAKAVEESLIDMRDL 603
>gi|218931226 choline acetyltransferase isoform 1 [Homo sapiens]
Length = 630
Score = 246 bits (629), Expect = 4e-65
Identities = 182/632 (28%), Positives = 299/632 (47%), Gaps = 52/632 (8%)
Query: 17 QDSLPSLPVPSLEESLKKYLESVTRTCYQIRGLDPDAKRGFLDLTREGIQVKPFANQEEY 76
+ LP LPVP L+++L YL+ + + ++E++
Sbjct: 10 ESGLPKLPVPPLQQTLATYLQCM----------------------------RHLVSEEQF 41
Query: 77 KKTEEIVQKFQS--GIGEKLHQKLLERAKGKRNWLEEWWLNVAYLDVRIPSQLNVNFAGP 134
+K++ IVQ+F + G+GE L QKLLER + NW+ E+WLN YL+ R+ +N + P
Sbjct: 42 RKSQAIVQQFGAPGGLGETLQQKLLERQEKTANWVSEYWLNDMYLNNRLALPVN---SSP 98
Query: 135 AAHFEHYWPPKEGTQLERGSITLWHNLNYWQLLRKEKVPVH----KVGNTPLDMNQFRML 190
A F P QL + + L+Y LL +P ++ PL M Q+ L
Sbjct: 99 AVIFARQHFPGTDDQLRFAASLISGVLSYKALLDSHSIPTDCAKGQLSGQPLCMKQYYGL 158
Query: 191 FSTCKVPGITRDSIMNYFRTESEGRSPNHIVVLCRGRAFVFDVIHEGCLVTPPELLRQLT 250
FS+ ++PG T+D+++ + S P H++V C + FV DV+ ++ +L QL
Sbjct: 159 FSSYRLPGHTQDTLVA--QNSSIMPEPEHVIVACCNQFFVLDVVINFRRLSEGDLFTQLR 216
Query: 251 YIHKKCHSEPDG-PGIAALTSEERTRWAKAREYLIGLDPENLALLEKIQSSLLVYSMEDS 309
I K +E + P I LTS+ R+ WA+AR L+ D N L+ I+ + + + D+
Sbjct: 217 KIVKMASNEDERLPPIGLLTSDGRSEWAEARTVLVK-DSTNRDSLDMIERCICLVCL-DA 274
Query: 310 SPHVTPEDYSEIIAAILIG----DPTVRWGDKSYNLISFSNGVFGCNCDHAPFDAMIMVN 365
V D + + G + RW DKS + +G G C+H+PFD +++V
Sbjct: 275 PGGVELSDTHRALQLLHGGGYSKNGANRWYDKSLQFVVGRDGTCGVVCEHSPFDGIVLVQ 334
Query: 366 ISYYVDEKIFQNEGRWKGSEKVRDIPLPEELIFIVDEKVLNDINQAKAQYLREASDLQIA 425
+ ++ + + Q+ + ++ V ++P P L + ++ + + + R +L
Sbjct: 335 CTEHLLKHMTQSSRKLIRADSVSELPAPRRLRWKCSPEIQGHLASSAEKLQRIVKNLDFI 394
Query: 426 AYAFTSFGKKLTKNKMLHPDTFIQLALQLAYYRLHGHPGCCYETAMTRHFYHGRTETMRS 485
Y F ++GK K + PD FIQ+ALQLA+YRLH YE+A R F GR + +RS
Sbjct: 395 VYKFDNYGKTFIKKQKCSPDAFIQVALQLAFYRLHRRLVPTYESASIRRFQEGRVDNIRS 454
Query: 486 CTVEAVRWCQSMQD--PSVNLRERQQKMLQAFAKHNKMMKDCSAGKGFDRHLLGLLLIAK 543
T EA+ + +++ D +V E+ + A G D HLL L +A+
Sbjct: 455 ATPEALAFVRAVTDHKAAVPASEKLLLLKDAIRAQTAYTVMAITGMAIDNHLLALRELAR 514
Query: 544 EEGLPVPELFTDPLFSKSGGGGNFVLSTSLVGYLRVQGVVV-PMVHNGYGFFYHIRDDRF 602
+PE+F D + S FVLSTS V P+V NGYG Y+ + +
Sbjct: 515 AMCKELPEMFMDETYLMS---NRFVLSTSQVPTTTEMFCCYGPVVPNGYGACYNPQPETI 571
Query: 603 VVACSAWKSCPETDAEKLVQLTFCAFHDMIQL 634
+ S++ SC ET + K + + DM L
Sbjct: 572 LFCISSFHSCKETSSSKFAKAVEESLIDMRDL 603
>gi|218931224 choline acetyltransferase isoform 3 [Homo sapiens]
Length = 666
Score = 246 bits (629), Expect = 4e-65
Identities = 182/632 (28%), Positives = 299/632 (47%), Gaps = 52/632 (8%)
Query: 17 QDSLPSLPVPSLEESLKKYLESVTRTCYQIRGLDPDAKRGFLDLTREGIQVKPFANQEEY 76
+ LP LPVP L+++L YL+ + + ++E++
Sbjct: 46 ESGLPKLPVPPLQQTLATYLQCM----------------------------RHLVSEEQF 77
Query: 77 KKTEEIVQKFQS--GIGEKLHQKLLERAKGKRNWLEEWWLNVAYLDVRIPSQLNVNFAGP 134
+K++ IVQ+F + G+GE L QKLLER + NW+ E+WLN YL+ R+ +N + P
Sbjct: 78 RKSQAIVQQFGAPGGLGETLQQKLLERQEKTANWVSEYWLNDMYLNNRLALPVN---SSP 134
Query: 135 AAHFEHYWPPKEGTQLERGSITLWHNLNYWQLLRKEKVPVH----KVGNTPLDMNQFRML 190
A F P QL + + L+Y LL +P ++ PL M Q+ L
Sbjct: 135 AVIFARQHFPGTDDQLRFAASLISGVLSYKALLDSHSIPTDCAKGQLSGQPLCMKQYYGL 194
Query: 191 FSTCKVPGITRDSIMNYFRTESEGRSPNHIVVLCRGRAFVFDVIHEGCLVTPPELLRQLT 250
FS+ ++PG T+D+++ + S P H++V C + FV DV+ ++ +L QL
Sbjct: 195 FSSYRLPGHTQDTLVA--QNSSIMPEPEHVIVACCNQFFVLDVVINFRRLSEGDLFTQLR 252
Query: 251 YIHKKCHSEPDG-PGIAALTSEERTRWAKAREYLIGLDPENLALLEKIQSSLLVYSMEDS 309
I K +E + P I LTS+ R+ WA+AR L+ D N L+ I+ + + + D+
Sbjct: 253 KIVKMASNEDERLPPIGLLTSDGRSEWAEARTVLVK-DSTNRDSLDMIERCICLVCL-DA 310
Query: 310 SPHVTPEDYSEIIAAILIG----DPTVRWGDKSYNLISFSNGVFGCNCDHAPFDAMIMVN 365
V D + + G + RW DKS + +G G C+H+PFD +++V
Sbjct: 311 PGGVELSDTHRALQLLHGGGYSKNGANRWYDKSLQFVVGRDGTCGVVCEHSPFDGIVLVQ 370
Query: 366 ISYYVDEKIFQNEGRWKGSEKVRDIPLPEELIFIVDEKVLNDINQAKAQYLREASDLQIA 425
+ ++ + + Q+ + ++ V ++P P L + ++ + + + R +L
Sbjct: 371 CTEHLLKHMTQSSRKLIRADSVSELPAPRRLRWKCSPEIQGHLASSAEKLQRIVKNLDFI 430
Query: 426 AYAFTSFGKKLTKNKMLHPDTFIQLALQLAYYRLHGHPGCCYETAMTRHFYHGRTETMRS 485
Y F ++GK K + PD FIQ+ALQLA+YRLH YE+A R F GR + +RS
Sbjct: 431 VYKFDNYGKTFIKKQKCSPDAFIQVALQLAFYRLHRRLVPTYESASIRRFQEGRVDNIRS 490
Query: 486 CTVEAVRWCQSMQD--PSVNLRERQQKMLQAFAKHNKMMKDCSAGKGFDRHLLGLLLIAK 543
T EA+ + +++ D +V E+ + A G D HLL L +A+
Sbjct: 491 ATPEALAFVRAVTDHKAAVPASEKLLLLKDAIRAQTAYTVMAITGMAIDNHLLALRELAR 550
Query: 544 EEGLPVPELFTDPLFSKSGGGGNFVLSTSLVGYLRVQGVVV-PMVHNGYGFFYHIRDDRF 602
+PE+F D + S FVLSTS V P+V NGYG Y+ + +
Sbjct: 551 AMCKELPEMFMDETYLMS---NRFVLSTSQVPTTTEMFCCYGPVVPNGYGACYNPQPETI 607
Query: 603 VVACSAWKSCPETDAEKLVQLTFCAFHDMIQL 634
+ S++ SC ET + K + + DM L
Sbjct: 608 LFCISSFHSCKETSSSKFAKAVEESLIDMRDL 639
>gi|218931221 choline acetyltransferase isoform 1 [Homo sapiens]
Length = 630
Score = 246 bits (629), Expect = 4e-65
Identities = 182/632 (28%), Positives = 299/632 (47%), Gaps = 52/632 (8%)
Query: 17 QDSLPSLPVPSLEESLKKYLESVTRTCYQIRGLDPDAKRGFLDLTREGIQVKPFANQEEY 76
+ LP LPVP L+++L YL+ + + ++E++
Sbjct: 10 ESGLPKLPVPPLQQTLATYLQCM----------------------------RHLVSEEQF 41
Query: 77 KKTEEIVQKFQS--GIGEKLHQKLLERAKGKRNWLEEWWLNVAYLDVRIPSQLNVNFAGP 134
+K++ IVQ+F + G+GE L QKLLER + NW+ E+WLN YL+ R+ +N + P
Sbjct: 42 RKSQAIVQQFGAPGGLGETLQQKLLERQEKTANWVSEYWLNDMYLNNRLALPVN---SSP 98
Query: 135 AAHFEHYWPPKEGTQLERGSITLWHNLNYWQLLRKEKVPVH----KVGNTPLDMNQFRML 190
A F P QL + + L+Y LL +P ++ PL M Q+ L
Sbjct: 99 AVIFARQHFPGTDDQLRFAASLISGVLSYKALLDSHSIPTDCAKGQLSGQPLCMKQYYGL 158
Query: 191 FSTCKVPGITRDSIMNYFRTESEGRSPNHIVVLCRGRAFVFDVIHEGCLVTPPELLRQLT 250
FS+ ++PG T+D+++ + S P H++V C + FV DV+ ++ +L QL
Sbjct: 159 FSSYRLPGHTQDTLVA--QNSSIMPEPEHVIVACCNQFFVLDVVINFRRLSEGDLFTQLR 216
Query: 251 YIHKKCHSEPDG-PGIAALTSEERTRWAKAREYLIGLDPENLALLEKIQSSLLVYSMEDS 309
I K +E + P I LTS+ R+ WA+AR L+ D N L+ I+ + + + D+
Sbjct: 217 KIVKMASNEDERLPPIGLLTSDGRSEWAEARTVLVK-DSTNRDSLDMIERCICLVCL-DA 274
Query: 310 SPHVTPEDYSEIIAAILIG----DPTVRWGDKSYNLISFSNGVFGCNCDHAPFDAMIMVN 365
V D + + G + RW DKS + +G G C+H+PFD +++V
Sbjct: 275 PGGVELSDTHRALQLLHGGGYSKNGANRWYDKSLQFVVGRDGTCGVVCEHSPFDGIVLVQ 334
Query: 366 ISYYVDEKIFQNEGRWKGSEKVRDIPLPEELIFIVDEKVLNDINQAKAQYLREASDLQIA 425
+ ++ + + Q+ + ++ V ++P P L + ++ + + + R +L
Sbjct: 335 CTEHLLKHMTQSSRKLIRADSVSELPAPRRLRWKCSPEIQGHLASSAEKLQRIVKNLDFI 394
Query: 426 AYAFTSFGKKLTKNKMLHPDTFIQLALQLAYYRLHGHPGCCYETAMTRHFYHGRTETMRS 485
Y F ++GK K + PD FIQ+ALQLA+YRLH YE+A R F GR + +RS
Sbjct: 395 VYKFDNYGKTFIKKQKCSPDAFIQVALQLAFYRLHRRLVPTYESASIRRFQEGRVDNIRS 454
Query: 486 CTVEAVRWCQSMQD--PSVNLRERQQKMLQAFAKHNKMMKDCSAGKGFDRHLLGLLLIAK 543
T EA+ + +++ D +V E+ + A G D HLL L +A+
Sbjct: 455 ATPEALAFVRAVTDHKAAVPASEKLLLLKDAIRAQTAYTVMAITGMAIDNHLLALRELAR 514
Query: 544 EEGLPVPELFTDPLFSKSGGGGNFVLSTSLVGYLRVQGVVV-PMVHNGYGFFYHIRDDRF 602
+PE+F D + S FVLSTS V P+V NGYG Y+ + +
Sbjct: 515 AMCKELPEMFMDETYLMS---NRFVLSTSQVPTTTEMFCCYGPVVPNGYGACYNPQPETI 571
Query: 603 VVACSAWKSCPETDAEKLVQLTFCAFHDMIQL 634
+ S++ SC ET + K + + DM L
Sbjct: 572 LFCISSFHSCKETSSSKFAKAVEESLIDMRDL 603
>gi|188595684 choline acetyltransferase isoform 1 [Homo sapiens]
Length = 630
Score = 246 bits (629), Expect = 4e-65
Identities = 182/632 (28%), Positives = 299/632 (47%), Gaps = 52/632 (8%)
Query: 17 QDSLPSLPVPSLEESLKKYLESVTRTCYQIRGLDPDAKRGFLDLTREGIQVKPFANQEEY 76
+ LP LPVP L+++L YL+ + + ++E++
Sbjct: 10 ESGLPKLPVPPLQQTLATYLQCM----------------------------RHLVSEEQF 41
Query: 77 KKTEEIVQKFQS--GIGEKLHQKLLERAKGKRNWLEEWWLNVAYLDVRIPSQLNVNFAGP 134
+K++ IVQ+F + G+GE L QKLLER + NW+ E+WLN YL+ R+ +N + P
Sbjct: 42 RKSQAIVQQFGAPGGLGETLQQKLLERQEKTANWVSEYWLNDMYLNNRLALPVN---SSP 98
Query: 135 AAHFEHYWPPKEGTQLERGSITLWHNLNYWQLLRKEKVPVH----KVGNTPLDMNQFRML 190
A F P QL + + L+Y LL +P ++ PL M Q+ L
Sbjct: 99 AVIFARQHFPGTDDQLRFAASLISGVLSYKALLDSHSIPTDCAKGQLSGQPLCMKQYYGL 158
Query: 191 FSTCKVPGITRDSIMNYFRTESEGRSPNHIVVLCRGRAFVFDVIHEGCLVTPPELLRQLT 250
FS+ ++PG T+D+++ + S P H++V C + FV DV+ ++ +L QL
Sbjct: 159 FSSYRLPGHTQDTLVA--QNSSIMPEPEHVIVACCNQFFVLDVVINFRRLSEGDLFTQLR 216
Query: 251 YIHKKCHSEPDG-PGIAALTSEERTRWAKAREYLIGLDPENLALLEKIQSSLLVYSMEDS 309
I K +E + P I LTS+ R+ WA+AR L+ D N L+ I+ + + + D+
Sbjct: 217 KIVKMASNEDERLPPIGLLTSDGRSEWAEARTVLVK-DSTNRDSLDMIERCICLVCL-DA 274
Query: 310 SPHVTPEDYSEIIAAILIG----DPTVRWGDKSYNLISFSNGVFGCNCDHAPFDAMIMVN 365
V D + + G + RW DKS + +G G C+H+PFD +++V
Sbjct: 275 PGGVELSDTHRALQLLHGGGYSKNGANRWYDKSLQFVVGRDGTCGVVCEHSPFDGIVLVQ 334
Query: 366 ISYYVDEKIFQNEGRWKGSEKVRDIPLPEELIFIVDEKVLNDINQAKAQYLREASDLQIA 425
+ ++ + + Q+ + ++ V ++P P L + ++ + + + R +L
Sbjct: 335 CTEHLLKHMTQSSRKLIRADSVSELPAPRRLRWKCSPEIQGHLASSAEKLQRIVKNLDFI 394
Query: 426 AYAFTSFGKKLTKNKMLHPDTFIQLALQLAYYRLHGHPGCCYETAMTRHFYHGRTETMRS 485
Y F ++GK K + PD FIQ+ALQLA+YRLH YE+A R F GR + +RS
Sbjct: 395 VYKFDNYGKTFIKKQKCSPDAFIQVALQLAFYRLHRRLVPTYESASIRRFQEGRVDNIRS 454
Query: 486 CTVEAVRWCQSMQD--PSVNLRERQQKMLQAFAKHNKMMKDCSAGKGFDRHLLGLLLIAK 543
T EA+ + +++ D +V E+ + A G D HLL L +A+
Sbjct: 455 ATPEALAFVRAVTDHKAAVPASEKLLLLKDAIRAQTAYTVMAITGMAIDNHLLALRELAR 514
Query: 544 EEGLPVPELFTDPLFSKSGGGGNFVLSTSLVGYLRVQGVVV-PMVHNGYGFFYHIRDDRF 602
+PE+F D + S FVLSTS V P+V NGYG Y+ + +
Sbjct: 515 AMCKELPEMFMDETYLMS---NRFVLSTSQVPTTTEMFCCYGPVVPNGYGACYNPQPETI 571
Query: 603 VVACSAWKSCPETDAEKLVQLTFCAFHDMIQL 634
+ S++ SC ET + K + + DM L
Sbjct: 572 LFCISSFHSCKETSSSKFAKAVEESLIDMRDL 603
>gi|188595672 choline acetyltransferase isoform 1 [Homo sapiens]
Length = 630
Score = 246 bits (629), Expect = 4e-65
Identities = 182/632 (28%), Positives = 299/632 (47%), Gaps = 52/632 (8%)
Query: 17 QDSLPSLPVPSLEESLKKYLESVTRTCYQIRGLDPDAKRGFLDLTREGIQVKPFANQEEY 76
+ LP LPVP L+++L YL+ + + ++E++
Sbjct: 10 ESGLPKLPVPPLQQTLATYLQCM----------------------------RHLVSEEQF 41
Query: 77 KKTEEIVQKFQS--GIGEKLHQKLLERAKGKRNWLEEWWLNVAYLDVRIPSQLNVNFAGP 134
+K++ IVQ+F + G+GE L QKLLER + NW+ E+WLN YL+ R+ +N + P
Sbjct: 42 RKSQAIVQQFGAPGGLGETLQQKLLERQEKTANWVSEYWLNDMYLNNRLALPVN---SSP 98
Query: 135 AAHFEHYWPPKEGTQLERGSITLWHNLNYWQLLRKEKVPVH----KVGNTPLDMNQFRML 190
A F P QL + + L+Y LL +P ++ PL M Q+ L
Sbjct: 99 AVIFARQHFPGTDDQLRFAASLISGVLSYKALLDSHSIPTDCAKGQLSGQPLCMKQYYGL 158
Query: 191 FSTCKVPGITRDSIMNYFRTESEGRSPNHIVVLCRGRAFVFDVIHEGCLVTPPELLRQLT 250
FS+ ++PG T+D+++ + S P H++V C + FV DV+ ++ +L QL
Sbjct: 159 FSSYRLPGHTQDTLVA--QNSSIMPEPEHVIVACCNQFFVLDVVINFRRLSEGDLFTQLR 216
Query: 251 YIHKKCHSEPDG-PGIAALTSEERTRWAKAREYLIGLDPENLALLEKIQSSLLVYSMEDS 309
I K +E + P I LTS+ R+ WA+AR L+ D N L+ I+ + + + D+
Sbjct: 217 KIVKMASNEDERLPPIGLLTSDGRSEWAEARTVLVK-DSTNRDSLDMIERCICLVCL-DA 274
Query: 310 SPHVTPEDYSEIIAAILIG----DPTVRWGDKSYNLISFSNGVFGCNCDHAPFDAMIMVN 365
V D + + G + RW DKS + +G G C+H+PFD +++V
Sbjct: 275 PGGVELSDTHRALQLLHGGGYSKNGANRWYDKSLQFVVGRDGTCGVVCEHSPFDGIVLVQ 334
Query: 366 ISYYVDEKIFQNEGRWKGSEKVRDIPLPEELIFIVDEKVLNDINQAKAQYLREASDLQIA 425
+ ++ + + Q+ + ++ V ++P P L + ++ + + + R +L
Sbjct: 335 CTEHLLKHMTQSSRKLIRADSVSELPAPRRLRWKCSPEIQGHLASSAEKLQRIVKNLDFI 394
Query: 426 AYAFTSFGKKLTKNKMLHPDTFIQLALQLAYYRLHGHPGCCYETAMTRHFYHGRTETMRS 485
Y F ++GK K + PD FIQ+ALQLA+YRLH YE+A R F GR + +RS
Sbjct: 395 VYKFDNYGKTFIKKQKCSPDAFIQVALQLAFYRLHRRLVPTYESASIRRFQEGRVDNIRS 454
Query: 486 CTVEAVRWCQSMQD--PSVNLRERQQKMLQAFAKHNKMMKDCSAGKGFDRHLLGLLLIAK 543
T EA+ + +++ D +V E+ + A G D HLL L +A+
Sbjct: 455 ATPEALAFVRAVTDHKAAVPASEKLLLLKDAIRAQTAYTVMAITGMAIDNHLLALRELAR 514
Query: 544 EEGLPVPELFTDPLFSKSGGGGNFVLSTSLVGYLRVQGVVV-PMVHNGYGFFYHIRDDRF 602
+PE+F D + S FVLSTS V P+V NGYG Y+ + +
Sbjct: 515 AMCKELPEMFMDETYLMS---NRFVLSTSQVPTTTEMFCCYGPVVPNGYGACYNPQPETI 571
Query: 603 VVACSAWKSCPETDAEKLVQLTFCAFHDMIQL 634
+ S++ SC ET + K + + DM L
Sbjct: 572 LFCISSFHSCKETSSSKFAKAVEESLIDMRDL 603
>gi|188595670 choline acetyltransferase isoform 2 [Homo sapiens]
Length = 748
Score = 246 bits (629), Expect = 4e-65
Identities = 182/632 (28%), Positives = 299/632 (47%), Gaps = 52/632 (8%)
Query: 17 QDSLPSLPVPSLEESLKKYLESVTRTCYQIRGLDPDAKRGFLDLTREGIQVKPFANQEEY 76
+ LP LPVP L+++L YL+ + + ++E++
Sbjct: 128 ESGLPKLPVPPLQQTLATYLQCM----------------------------RHLVSEEQF 159
Query: 77 KKTEEIVQKFQS--GIGEKLHQKLLERAKGKRNWLEEWWLNVAYLDVRIPSQLNVNFAGP 134
+K++ IVQ+F + G+GE L QKLLER + NW+ E+WLN YL+ R+ +N + P
Sbjct: 160 RKSQAIVQQFGAPGGLGETLQQKLLERQEKTANWVSEYWLNDMYLNNRLALPVN---SSP 216
Query: 135 AAHFEHYWPPKEGTQLERGSITLWHNLNYWQLLRKEKVPVH----KVGNTPLDMNQFRML 190
A F P QL + + L+Y LL +P ++ PL M Q+ L
Sbjct: 217 AVIFARQHFPGTDDQLRFAASLISGVLSYKALLDSHSIPTDCAKGQLSGQPLCMKQYYGL 276
Query: 191 FSTCKVPGITRDSIMNYFRTESEGRSPNHIVVLCRGRAFVFDVIHEGCLVTPPELLRQLT 250
FS+ ++PG T+D+++ + S P H++V C + FV DV+ ++ +L QL
Sbjct: 277 FSSYRLPGHTQDTLVA--QNSSIMPEPEHVIVACCNQFFVLDVVINFRRLSEGDLFTQLR 334
Query: 251 YIHKKCHSEPDG-PGIAALTSEERTRWAKAREYLIGLDPENLALLEKIQSSLLVYSMEDS 309
I K +E + P I LTS+ R+ WA+AR L+ D N L+ I+ + + + D+
Sbjct: 335 KIVKMASNEDERLPPIGLLTSDGRSEWAEARTVLVK-DSTNRDSLDMIERCICLVCL-DA 392
Query: 310 SPHVTPEDYSEIIAAILIG----DPTVRWGDKSYNLISFSNGVFGCNCDHAPFDAMIMVN 365
V D + + G + RW DKS + +G G C+H+PFD +++V
Sbjct: 393 PGGVELSDTHRALQLLHGGGYSKNGANRWYDKSLQFVVGRDGTCGVVCEHSPFDGIVLVQ 452
Query: 366 ISYYVDEKIFQNEGRWKGSEKVRDIPLPEELIFIVDEKVLNDINQAKAQYLREASDLQIA 425
+ ++ + + Q+ + ++ V ++P P L + ++ + + + R +L
Sbjct: 453 CTEHLLKHMTQSSRKLIRADSVSELPAPRRLRWKCSPEIQGHLASSAEKLQRIVKNLDFI 512
Query: 426 AYAFTSFGKKLTKNKMLHPDTFIQLALQLAYYRLHGHPGCCYETAMTRHFYHGRTETMRS 485
Y F ++GK K + PD FIQ+ALQLA+YRLH YE+A R F GR + +RS
Sbjct: 513 VYKFDNYGKTFIKKQKCSPDAFIQVALQLAFYRLHRRLVPTYESASIRRFQEGRVDNIRS 572
Query: 486 CTVEAVRWCQSMQD--PSVNLRERQQKMLQAFAKHNKMMKDCSAGKGFDRHLLGLLLIAK 543
T EA+ + +++ D +V E+ + A G D HLL L +A+
Sbjct: 573 ATPEALAFVRAVTDHKAAVPASEKLLLLKDAIRAQTAYTVMAITGMAIDNHLLALRELAR 632
Query: 544 EEGLPVPELFTDPLFSKSGGGGNFVLSTSLVGYLRVQGVVV-PMVHNGYGFFYHIRDDRF 602
+PE+F D + S FVLSTS V P+V NGYG Y+ + +
Sbjct: 633 AMCKELPEMFMDETYLMS---NRFVLSTSQVPTTTEMFCCYGPVVPNGYGACYNPQPETI 689
Query: 603 VVACSAWKSCPETDAEKLVQLTFCAFHDMIQL 634
+ S++ SC ET + K + + DM L
Sbjct: 690 LFCISSFHSCKETSSSKFAKAVEESLIDMRDL 721
>gi|73623030 carnitine palmitoyltransferase 1A liver isoform 1 [Homo
sapiens]
Length = 773
Score = 229 bits (584), Expect = 6e-60
Identities = 182/641 (28%), Positives = 300/641 (46%), Gaps = 61/641 (9%)
Query: 14 FQYQDSLPSLPVPSLEESLKKYLESVTRTCYQIRGLDPDAKRGFLDLTREGIQVKPFANQ 73
+ +Q SLP LPVP++++++ +YL+SV +P +
Sbjct: 165 YSFQTSLPRLPVPAVKDTVNRYLQSV----------------------------RPLMKE 196
Query: 74 EEYKKTEEIVQKFQSGIGEKLHQKLLERAKGKRNWLEEWWLNVAYLDVRIPSQLNVNFAG 133
E++K+ + Q F G+G +L L ++ N++ +WW YL R P +N N+
Sbjct: 197 EDFKRMTALAQDFAVGLGPRLQWYLKLKSWWATNYVSDWWEEYIYLRGRGPLMVNSNYY- 255
Query: 134 PAAHFEHYWPPKEGTQLERGSITLWHNLNYWQLLRKEKV-PVHKVGNT-PLDMNQFRMLF 191
A + P Q R + L Y + L +E++ P+ +G+T PL Q+ +F
Sbjct: 256 -AMDLLYILPTH--IQAARAGNAIHAILLYRRKLDREEIKPIRLLGSTIPLCSAQWERMF 312
Query: 192 STCKVPGITRDSIMNYFRTESEGRSPNHIVVLCRGRAFVFDVIHEGCLVTPPELLRQLTY 251
+T ++PG D+I + R HIVV RGR F + H+G L+ P E+ +Q+
Sbjct: 313 NTSRIPGEETDTIQHM-------RDSKHIVVYHRGRYFKVWLYHDGRLLKPREMEQQMQR 365
Query: 252 I-HKKCHSEPDGPGIAALTSEERTRWAKAREYLIGLDPENLALLEKIQSSLLVYSMEDSS 310
I +P +AALT+ +R WA+ R+ G +N L+ ++ + +++++
Sbjct: 366 ILDNTSEPQPGEARLAALTAGDRVPWARCRQAYFGRG-KNKQSLDAVEKAAFFVTLDETE 424
Query: 311 PHVTPED----YSEIIAAILIGDPTVRWGDKSYNLISFSNGVFGCNCDHAPFDAMIMVNI 366
ED ++L G RW DKS+ + F NG G N +H+ DA I+ ++
Sbjct: 425 EGYRSEDPDTSMDSYAKSLLHGRCYDRWFDKSFTFVVFKNGKMGLNAEHSWADAPIVAHL 484
Query: 367 SYYVD-----EKIFQNEGRWKGSEKVRDIPLPEELIFIVDEKVLNDINQAKAQYLREASD 421
YV + + +G KG +IP P L + + + I + A+D
Sbjct: 485 WEYVMSIDSLQLGYAEDGHCKGDINP-NIPYPTRLQWDIPGECQEVIETSLNTANLLAND 543
Query: 422 LQIAAYAFTSFGKKLTKNKMLHPDTFIQLALQLAYYRLHGHPGCCYETAMTRHFYHGRTE 481
+ ++ F +FGK + K PD F+QLALQLA+Y+ G YE +MTR F GRTE
Sbjct: 544 VDFHSFPFVAFGKGIIKKCRTSPDAFVQLALQLAHYKDMGKFCLTYEASMTRLFREGRTE 603
Query: 482 TMRSCTVEAVRWCQSMQDPSVNLRERQQKMLQAFAKHNKMMKDCSAGKGFDRHLLGLLLI 541
T+RSCT E+ + ++M DP+ + +R + A KH M + G G DRHL L ++
Sbjct: 604 TVRSCTTESCDFVRAMVDPAQTVEQRLKLFKLASEKHQHMYRLAMTGSGIDRHLFCLYVV 663
Query: 542 AKEEGLPVP---ELFTDP-LFSKSGGGGNFVLSTSLVG---YLRVQGVVVPMVHNGYGFF 594
+K + P E+ ++P S S V L Y+ G P+ +GYG
Sbjct: 664 SKYLAVESPFLKEVLSEPWRLSTSQTPQQQVELFDLENNPEYVSSGGGFGPVADDGYGVS 723
Query: 595 YHIRDDRFV-VACSAWKSCPETDAEKLVQLTFCAFHDMIQL 634
Y + + + S+ SCPETD+ + + A D+I L
Sbjct: 724 YILVGENLINFHISSKFSCPETDSHRFGRHLKEAMTDIITL 764
>gi|73623028 carnitine palmitoyltransferase 1A liver isoform 2 [Homo
sapiens]
Length = 756
Score = 224 bits (572), Expect = 1e-58
Identities = 177/622 (28%), Positives = 291/622 (46%), Gaps = 61/622 (9%)
Query: 14 FQYQDSLPSLPVPSLEESLKKYLESVTRTCYQIRGLDPDAKRGFLDLTREGIQVKPFANQ 73
+ +Q SLP LPVP++++++ +YL+SV +P +
Sbjct: 165 YSFQTSLPRLPVPAVKDTVNRYLQSV----------------------------RPLMKE 196
Query: 74 EEYKKTEEIVQKFQSGIGEKLHQKLLERAKGKRNWLEEWWLNVAYLDVRIPSQLNVNFAG 133
E++K+ + Q F G+G +L L ++ N++ +WW YL R P +N N+
Sbjct: 197 EDFKRMTALAQDFAVGLGPRLQWYLKLKSWWATNYVSDWWEEYIYLRGRGPLMVNSNYY- 255
Query: 134 PAAHFEHYWPPKEGTQLERGSITLWHNLNYWQLLRKEKV-PVHKVGNT-PLDMNQFRMLF 191
A + P Q R + L Y + L +E++ P+ +G+T PL Q+ +F
Sbjct: 256 -AMDLLYILPTH--IQAARAGNAIHAILLYRRKLDREEIKPIRLLGSTIPLCSAQWERMF 312
Query: 192 STCKVPGITRDSIMNYFRTESEGRSPNHIVVLCRGRAFVFDVIHEGCLVTPPELLRQLTY 251
+T ++PG D+I + R HIVV RGR F + H+G L+ P E+ +Q+
Sbjct: 313 NTSRIPGEETDTIQHM-------RDSKHIVVYHRGRYFKVWLYHDGRLLKPREMEQQMQR 365
Query: 252 I-HKKCHSEPDGPGIAALTSEERTRWAKAREYLIGLDPENLALLEKIQSSLLVYSMEDSS 310
I +P +AALT+ +R WA+ R+ G +N L+ ++ + +++++
Sbjct: 366 ILDNTSEPQPGEARLAALTAGDRVPWARCRQAYFGRG-KNKQSLDAVEKAAFFVTLDETE 424
Query: 311 PHVTPED----YSEIIAAILIGDPTVRWGDKSYNLISFSNGVFGCNCDHAPFDAMIMVNI 366
ED ++L G RW DKS+ + F NG G N +H+ DA I+ ++
Sbjct: 425 EGYRSEDPDTSMDSYAKSLLHGRCYDRWFDKSFTFVVFKNGKMGLNAEHSWADAPIVAHL 484
Query: 367 SYYVD-----EKIFQNEGRWKGSEKVRDIPLPEELIFIVDEKVLNDINQAKAQYLREASD 421
YV + + +G KG +IP P L + + + I + A+D
Sbjct: 485 WEYVMSIDSLQLGYAEDGHCKGDINP-NIPYPTRLQWDIPGECQEVIETSLNTANLLAND 543
Query: 422 LQIAAYAFTSFGKKLTKNKMLHPDTFIQLALQLAYYRLHGHPGCCYETAMTRHFYHGRTE 481
+ ++ F +FGK + K PD F+QLALQLA+Y+ G YE +MTR F GRTE
Sbjct: 544 VDFHSFPFVAFGKGIIKKCRTSPDAFVQLALQLAHYKDMGKFCLTYEASMTRLFREGRTE 603
Query: 482 TMRSCTVEAVRWCQSMQDPSVNLRERQQKMLQAFAKHNKMMKDCSAGKGFDRHLLGLLLI 541
T+RSCT E+ + ++M DP+ + +R + A KH M + G G DRHL L ++
Sbjct: 604 TVRSCTTESCDFVRAMVDPAQTVEQRLKLFKLASEKHQHMYRLAMTGSGIDRHLFCLYVV 663
Query: 542 AKEEGLPVP---ELFTDP-LFSKSGGGGNFVLSTSLVG---YLRVQGVVVPMVHNGYGFF 594
+K + P E+ ++P S S V L Y+ G P+ +GYG
Sbjct: 664 SKYLAVESPFLKEVLSEPWRLSTSQTPQQQVELFDLENNPEYVSSGGGFGPVADDGYGVS 723
Query: 595 YHIRDDRFV-VACSAWKSCPET 615
Y + + + S+ SCPET
Sbjct: 724 YILVGENLINFHISSKFSCPET 745
>gi|4503023 carnitine O-palmitoyltransferase precursor [Homo
sapiens]
Length = 658
Score = 222 bits (565), Expect = 9e-58
Identities = 186/662 (28%), Positives = 307/662 (46%), Gaps = 91/662 (13%)
Query: 13 TFQYQDSLPSLPVPSLEESLKKYLESVTRTCYQIRGLDPDAKRGFLDLTREGIQVKPFAN 72
T YQDSLP LP+P LE+++++YL + KP N
Sbjct: 42 TMHYQDSLPRLPIPKLEDTIRRYLSAQ----------------------------KPLLN 73
Query: 73 QEEYKKTEEIVQKFQSGIGEKLHQKL--LERAKGKRNWLEEWWLNVAYLDVRIPSQLNVN 130
+++KTE+ + F++GIG++LH++L L++ +++ W ++ YL R LN N
Sbjct: 74 DGQFRKTEQFCKSFENGIGKELHEQLVALDKQNKHTSYISGPWFDM-YLSARDSVVLNFN 132
Query: 131 FAGPAAHFEHYWPPKEGTQLERGSITLWHNLNYWQLLRK--------------------- 169
P F + QL R + + + + LR
Sbjct: 133 ---PFMAFNPDPKSEYNDQLTRATNMTVSAIRFLKTLRAGLLEPEVFHLNPAKSDTITFK 189
Query: 170 ---EKVP-------VHKVGNTPLDMNQFRMLFSTCKVPGITRDSIMNYFRTESEGRSPNH 219
VP + V PLDM+Q+ LF++ ++P +RD + T+ + R H
Sbjct: 190 RLIRFVPSSLSWYGAYLVNAYPLDMSQYFRLFNSTRLPKPSRDELF----TDDKAR---H 242
Query: 220 IVVLCRGRAFVFDVI-HEGCLVTPPELLRQLTYIHKKCHSEPDGPGIAALTSEERTRWAK 278
++VL +G ++FDV+ +G +V+P E+ L YI P+ P +A LTSE R WA+
Sbjct: 243 LLVLRKGNFYIFDVLDQDGNIVSPSEIQAHLKYILSDSSPAPEFP-LAYLTSENRDIWAE 301
Query: 279 AREYLIGLDPENLALLEKIQSSLLVYSMEDSSPHVTPEDYSEIIAAILIGDPTVRWGDKS 338
R+ L+ E L K+ S++ ++D +D + +L GD T RW DKS
Sbjct: 302 LRQKLMSSGNEES--LRKVDSAVFCLCLDD----FPIKDLVHLSHNMLHGDGTNRWFDKS 355
Query: 339 YNLISFSNGVFGCNCDHAPFDAMIMVNISYYVDEKIFQNEGRWKGSEKVR--DIPLPEEL 396
+NLI +G + +H+ D + ++ V + Q S+ ++L
Sbjct: 356 FNLIIAKDGSTAVHFEHSWGDGVAVLRFFNEVFKDSTQTPAVTPQSQPATTDSTVTVQKL 415
Query: 397 IFIVDEKVLNDINQAKAQYLREASDLQIAAYAFTSFGKKLTKNKMLHPDTFIQLALQLAY 456
F + + + I AK ++ L I F GK+ K + L PD QLA Q+A+
Sbjct: 416 NFELTDALKTGITAAKEKFDATMKTLTIDCVQFQRGGKEFLKKQKLSPDAVAQLAFQMAF 475
Query: 457 YRLHGHPGCCYETAMTRHFYHGRTETMRSCTVEAVRWCQS-MQDPS-VNLRERQQKMLQA 514
R +G YE+ T F HGRTET+R +V R ++ +++PS + E QQ M++
Sbjct: 476 LRQYGQTVATYESCSTAAFKHGRTETIRPASVYTKRCSEAFVREPSRHSAGELQQMMVEC 535
Query: 515 FAKHNKMMKDCSAGKGFDRHLLGLLLIAKEEGLPVPELFTDPLFSKSGGGGNFVLSTSLV 574
H ++ K+ + G+GFDRHL L +A +G+ +PEL+ DP + G + VLSTS +
Sbjct: 536 SKYHGQLTKEAAMGQGFDRHLFALRHLAAAKGIILPELYLDPAY---GQINHNVLSTSTL 592
Query: 575 GYLRVQ-GVVVPMVHNGYGFFYHIRDDRFVVACSAWKSCPETDAEKLVQLTFCAFHDMIQ 633
V G P+V +G+G Y + D+ + C+ S P +A + +Q A DM
Sbjct: 593 SSPAVNLGGFAPVVSDGFGVGYAVHDN--WIGCNV-SSYPGRNAREFLQCVEKALEDMFD 649
Query: 634 LM 635
+
Sbjct: 650 AL 651
>gi|223468672 carnitine palmitoyltransferase 1B isoform a [Homo
sapiens]
Length = 772
Score = 211 bits (537), Expect = 2e-54
Identities = 179/644 (27%), Positives = 287/644 (44%), Gaps = 79/644 (12%)
Query: 4 QLAKSTEERTFQYQDSLPSLPVPSLEESLKKYLESVTRTCYQIRGLDPDAKRGFLDLTRE 63
+L S + +Q SLP LPVP + ++++YLES
Sbjct: 157 RLLSSRHPMLYSFQTSLPKLPVPRVSATIQRYLES------------------------- 191
Query: 64 GIQVKPFANQEEYKKTEEIVQKFQSGIGEKLHQKLLERAKGKRNWLEEWWLNVAYLDVRI 123
V+P + EEY + E + ++FQ +L + L+ ++ N++ +WW YL R
Sbjct: 192 ---VRPLLDDEEYYRMELLAKEFQDKTAPRLQKYLVLKSWWASNYVSDWWEEYIYLRGRS 248
Query: 124 PSQLNVNFAGPAAHFEHYWPPKEGTQLERGSITLWHNLNYWQLLRKEKV-PVHKVGNTPL 182
P +N N+ + Q R + + Y + L +E++ PV +G P+
Sbjct: 249 PLMVNSNY----YVMDLVLIKNTDVQAARLGNIIHAMIMYRRKLDREEIKPVMALGIVPM 304
Query: 183 DMNQFRMLFSTCKVPGITRDSIMNYFRTESEGRSPNHIVVLCRGRAFVFDVIHEGCLVTP 242
Q +F+T ++PG D + + S+ R H+ V +GR F + L+ P
Sbjct: 305 CSYQMERMFNTTRIPGKDTDVLQHL----SDSR---HVAVYHKGRFFKLWLYEGARLLKP 357
Query: 243 PELLRQLTYI-HKKCHSEPDGPGIAALTSEERTRWAKAREYLIGLDPENLALLEKIQSSL 301
+L Q I +P +AALT+ R WA+AR+ +N A LE I+ +
Sbjct: 358 QDLEMQFQRILDDPSPPQPGEEKLAALTAGGRVEWAQARQAFFS-SGKNKAALEAIERAA 416
Query: 302 LVYSMEDSSPHVTPEDYSEII---AAILIGDPTVRWGDKSYNLISFSNGVFGCNCDHAPF 358
++++ S PED + + A+L G+ RW DKS+ LISF NG G N +HA
Sbjct: 417 FFVALDEESYSYDPEDEASLSLYGKALLHGNCYNRWFDKSFTLISFKNGQLGLNAEHAWA 476
Query: 359 DAMIMVNISYYV-----DEKIFQNEGRWKGSEKVRDIPLPEELIFIVDEKVLNDINQAKA 413
DA I+ ++ +V + G G P P L + + ++ I +
Sbjct: 477 DAPIIGHLWEFVLGTDSFHLGYTETGHCLGKPNPALAP-PTRLQWDIPKQCQAVIESSYQ 535
Query: 414 QYLREASDLQIAAYAFTSFGKKLTKNKMLHPDTFIQLALQLAYYRLHGHPGCCYETAMTR 473
A D+++ + F FGK L K PD F+Q+ALQLA++R G YE +MTR
Sbjct: 536 VAKALADDVELYCFQFLPFGKGLIKKCRTSPDAFVQIALQLAHFRDRGKFCLTYEASMTR 595
Query: 474 HFYHGRTETMRSCTVEAVRWCQSMQDPSVNLRERQQKMLQAFAKHNKMMKDCSAGKGFDR 533
F GRTET+RSCT E+ + Q+M + S + + +A KH M + G G DR
Sbjct: 596 MFREGRTETVRSCTSESTAFVQAMMEGSHTKADLRDLFQKAAKKHQNMYRLAMTGAGIDR 655
Query: 534 HLLGLLLIAKEEGLPVP---ELFTDPLFSKSGGGGNFVLSTSLV--------------GY 576
HL L L++K G+ P E+ ++P + LSTS + +
Sbjct: 656 HLFCLYLVSKYLGVSSPFLAEVLSEP----------WRLSTSQIPQSQIRMFDPEQHPNH 705
Query: 577 LRVQGVVVPMVHNGYGFFYHIRDDRFV-VACSAWKSCPETDAEK 619
L G P+ +GYG Y I + + S+ S ET+A++
Sbjct: 706 LGAGGGFGPVADDGYGVSYMIAGENTIFFHISSKFSSSETNAQR 749
>gi|23238254 carnitine palmitoyltransferase 1B isoform a [Homo
sapiens]
Length = 772
Score = 211 bits (537), Expect = 2e-54
Identities = 179/644 (27%), Positives = 287/644 (44%), Gaps = 79/644 (12%)
Query: 4 QLAKSTEERTFQYQDSLPSLPVPSLEESLKKYLESVTRTCYQIRGLDPDAKRGFLDLTRE 63
+L S + +Q SLP LPVP + ++++YLES
Sbjct: 157 RLLSSRHPMLYSFQTSLPKLPVPRVSATIQRYLES------------------------- 191
Query: 64 GIQVKPFANQEEYKKTEEIVQKFQSGIGEKLHQKLLERAKGKRNWLEEWWLNVAYLDVRI 123
V+P + EEY + E + ++FQ +L + L+ ++ N++ +WW YL R
Sbjct: 192 ---VRPLLDDEEYYRMELLAKEFQDKTAPRLQKYLVLKSWWASNYVSDWWEEYIYLRGRS 248
Query: 124 PSQLNVNFAGPAAHFEHYWPPKEGTQLERGSITLWHNLNYWQLLRKEKV-PVHKVGNTPL 182
P +N N+ + Q R + + Y + L +E++ PV +G P+
Sbjct: 249 PLMVNSNY----YVMDLVLIKNTDVQAARLGNIIHAMIMYRRKLDREEIKPVMALGIVPM 304
Query: 183 DMNQFRMLFSTCKVPGITRDSIMNYFRTESEGRSPNHIVVLCRGRAFVFDVIHEGCLVTP 242
Q +F+T ++PG D + + S+ R H+ V +GR F + L+ P
Sbjct: 305 CSYQMERMFNTTRIPGKDTDVLQHL----SDSR---HVAVYHKGRFFKLWLYEGARLLKP 357
Query: 243 PELLRQLTYI-HKKCHSEPDGPGIAALTSEERTRWAKAREYLIGLDPENLALLEKIQSSL 301
+L Q I +P +AALT+ R WA+AR+ +N A LE I+ +
Sbjct: 358 QDLEMQFQRILDDPSPPQPGEEKLAALTAGGRVEWAQARQAFFS-SGKNKAALEAIERAA 416
Query: 302 LVYSMEDSSPHVTPEDYSEII---AAILIGDPTVRWGDKSYNLISFSNGVFGCNCDHAPF 358
++++ S PED + + A+L G+ RW DKS+ LISF NG G N +HA
Sbjct: 417 FFVALDEESYSYDPEDEASLSLYGKALLHGNCYNRWFDKSFTLISFKNGQLGLNAEHAWA 476
Query: 359 DAMIMVNISYYV-----DEKIFQNEGRWKGSEKVRDIPLPEELIFIVDEKVLNDINQAKA 413
DA I+ ++ +V + G G P P L + + ++ I +
Sbjct: 477 DAPIIGHLWEFVLGTDSFHLGYTETGHCLGKPNPALAP-PTRLQWDIPKQCQAVIESSYQ 535
Query: 414 QYLREASDLQIAAYAFTSFGKKLTKNKMLHPDTFIQLALQLAYYRLHGHPGCCYETAMTR 473
A D+++ + F FGK L K PD F+Q+ALQLA++R G YE +MTR
Sbjct: 536 VAKALADDVELYCFQFLPFGKGLIKKCRTSPDAFVQIALQLAHFRDRGKFCLTYEASMTR 595
Query: 474 HFYHGRTETMRSCTVEAVRWCQSMQDPSVNLRERQQKMLQAFAKHNKMMKDCSAGKGFDR 533
F GRTET+RSCT E+ + Q+M + S + + +A KH M + G G DR
Sbjct: 596 MFREGRTETVRSCTSESTAFVQAMMEGSHTKADLRDLFQKAAKKHQNMYRLAMTGAGIDR 655
Query: 534 HLLGLLLIAKEEGLPVP---ELFTDPLFSKSGGGGNFVLSTSLV--------------GY 576
HL L L++K G+ P E+ ++P + LSTS + +
Sbjct: 656 HLFCLYLVSKYLGVSSPFLAEVLSEP----------WRLSTSQIPQSQIRMFDPEQHPNH 705
Query: 577 LRVQGVVVPMVHNGYGFFYHIRDDRFV-VACSAWKSCPETDAEK 619
L G P+ +GYG Y I + + S+ S ET+A++
Sbjct: 706 LGAGGGFGPVADDGYGVSYMIAGENTIFFHISSKFSSSETNAQR 749
>gi|223468678 carnitine palmitoyltransferase 1B isoform a [Homo
sapiens]
Length = 772
Score = 211 bits (537), Expect = 2e-54
Identities = 179/644 (27%), Positives = 287/644 (44%), Gaps = 79/644 (12%)
Query: 4 QLAKSTEERTFQYQDSLPSLPVPSLEESLKKYLESVTRTCYQIRGLDPDAKRGFLDLTRE 63
+L S + +Q SLP LPVP + ++++YLES
Sbjct: 157 RLLSSRHPMLYSFQTSLPKLPVPRVSATIQRYLES------------------------- 191
Query: 64 GIQVKPFANQEEYKKTEEIVQKFQSGIGEKLHQKLLERAKGKRNWLEEWWLNVAYLDVRI 123
V+P + EEY + E + ++FQ +L + L+ ++ N++ +WW YL R
Sbjct: 192 ---VRPLLDDEEYYRMELLAKEFQDKTAPRLQKYLVLKSWWASNYVSDWWEEYIYLRGRS 248
Query: 124 PSQLNVNFAGPAAHFEHYWPPKEGTQLERGSITLWHNLNYWQLLRKEKV-PVHKVGNTPL 182
P +N N+ + Q R + + Y + L +E++ PV +G P+
Sbjct: 249 PLMVNSNY----YVMDLVLIKNTDVQAARLGNIIHAMIMYRRKLDREEIKPVMALGIVPM 304
Query: 183 DMNQFRMLFSTCKVPGITRDSIMNYFRTESEGRSPNHIVVLCRGRAFVFDVIHEGCLVTP 242
Q +F+T ++PG D + + S+ R H+ V +GR F + L+ P
Sbjct: 305 CSYQMERMFNTTRIPGKDTDVLQHL----SDSR---HVAVYHKGRFFKLWLYEGARLLKP 357
Query: 243 PELLRQLTYI-HKKCHSEPDGPGIAALTSEERTRWAKAREYLIGLDPENLALLEKIQSSL 301
+L Q I +P +AALT+ R WA+AR+ +N A LE I+ +
Sbjct: 358 QDLEMQFQRILDDPSPPQPGEEKLAALTAGGRVEWAQARQAFFS-SGKNKAALEAIERAA 416
Query: 302 LVYSMEDSSPHVTPEDYSEII---AAILIGDPTVRWGDKSYNLISFSNGVFGCNCDHAPF 358
++++ S PED + + A+L G+ RW DKS+ LISF NG G N +HA
Sbjct: 417 FFVALDEESYSYDPEDEASLSLYGKALLHGNCYNRWFDKSFTLISFKNGQLGLNAEHAWA 476
Query: 359 DAMIMVNISYYV-----DEKIFQNEGRWKGSEKVRDIPLPEELIFIVDEKVLNDINQAKA 413
DA I+ ++ +V + G G P P L + + ++ I +
Sbjct: 477 DAPIIGHLWEFVLGTDSFHLGYTETGHCLGKPNPALAP-PTRLQWDIPKQCQAVIESSYQ 535
Query: 414 QYLREASDLQIAAYAFTSFGKKLTKNKMLHPDTFIQLALQLAYYRLHGHPGCCYETAMTR 473
A D+++ + F FGK L K PD F+Q+ALQLA++R G YE +MTR
Sbjct: 536 VAKALADDVELYCFQFLPFGKGLIKKCRTSPDAFVQIALQLAHFRDRGKFCLTYEASMTR 595
Query: 474 HFYHGRTETMRSCTVEAVRWCQSMQDPSVNLRERQQKMLQAFAKHNKMMKDCSAGKGFDR 533
F GRTET+RSCT E+ + Q+M + S + + +A KH M + G G DR
Sbjct: 596 MFREGRTETVRSCTSESTAFVQAMMEGSHTKADLRDLFQKAAKKHQNMYRLAMTGAGIDR 655
Query: 534 HLLGLLLIAKEEGLPVP---ELFTDPLFSKSGGGGNFVLSTSLV--------------GY 576
HL L L++K G+ P E+ ++P + LSTS + +
Sbjct: 656 HLFCLYLVSKYLGVSSPFLAEVLSEP----------WRLSTSQIPQSQIRMFDPEQHPNH 705
Query: 577 LRVQGVVVPMVHNGYGFFYHIRDDRFV-VACSAWKSCPETDAEK 619
L G P+ +GYG Y I + + S+ S ET+A++
Sbjct: 706 LGAGGGFGPVADDGYGVSYMIAGENTIFFHISSKFSSSETNAQR 749
>gi|4758050 carnitine palmitoyltransferase 1B isoform a [Homo
sapiens]
Length = 772
Score = 211 bits (537), Expect = 2e-54
Identities = 179/644 (27%), Positives = 287/644 (44%), Gaps = 79/644 (12%)
Query: 4 QLAKSTEERTFQYQDSLPSLPVPSLEESLKKYLESVTRTCYQIRGLDPDAKRGFLDLTRE 63
+L S + +Q SLP LPVP + ++++YLES
Sbjct: 157 RLLSSRHPMLYSFQTSLPKLPVPRVSATIQRYLES------------------------- 191
Query: 64 GIQVKPFANQEEYKKTEEIVQKFQSGIGEKLHQKLLERAKGKRNWLEEWWLNVAYLDVRI 123
V+P + EEY + E + ++FQ +L + L+ ++ N++ +WW YL R
Sbjct: 192 ---VRPLLDDEEYYRMELLAKEFQDKTAPRLQKYLVLKSWWASNYVSDWWEEYIYLRGRS 248
Query: 124 PSQLNVNFAGPAAHFEHYWPPKEGTQLERGSITLWHNLNYWQLLRKEKV-PVHKVGNTPL 182
P +N N+ + Q R + + Y + L +E++ PV +G P+
Sbjct: 249 PLMVNSNY----YVMDLVLIKNTDVQAARLGNIIHAMIMYRRKLDREEIKPVMALGIVPM 304
Query: 183 DMNQFRMLFSTCKVPGITRDSIMNYFRTESEGRSPNHIVVLCRGRAFVFDVIHEGCLVTP 242
Q +F+T ++PG D + + S+ R H+ V +GR F + L+ P
Sbjct: 305 CSYQMERMFNTTRIPGKDTDVLQHL----SDSR---HVAVYHKGRFFKLWLYEGARLLKP 357
Query: 243 PELLRQLTYI-HKKCHSEPDGPGIAALTSEERTRWAKAREYLIGLDPENLALLEKIQSSL 301
+L Q I +P +AALT+ R WA+AR+ +N A LE I+ +
Sbjct: 358 QDLEMQFQRILDDPSPPQPGEEKLAALTAGGRVEWAQARQAFFS-SGKNKAALEAIERAA 416
Query: 302 LVYSMEDSSPHVTPEDYSEII---AAILIGDPTVRWGDKSYNLISFSNGVFGCNCDHAPF 358
++++ S PED + + A+L G+ RW DKS+ LISF NG G N +HA
Sbjct: 417 FFVALDEESYSYDPEDEASLSLYGKALLHGNCYNRWFDKSFTLISFKNGQLGLNAEHAWA 476
Query: 359 DAMIMVNISYYV-----DEKIFQNEGRWKGSEKVRDIPLPEELIFIVDEKVLNDINQAKA 413
DA I+ ++ +V + G G P P L + + ++ I +
Sbjct: 477 DAPIIGHLWEFVLGTDSFHLGYTETGHCLGKPNPALAP-PTRLQWDIPKQCQAVIESSYQ 535
Query: 414 QYLREASDLQIAAYAFTSFGKKLTKNKMLHPDTFIQLALQLAYYRLHGHPGCCYETAMTR 473
A D+++ + F FGK L K PD F+Q+ALQLA++R G YE +MTR
Sbjct: 536 VAKALADDVELYCFQFLPFGKGLIKKCRTSPDAFVQIALQLAHFRDRGKFCLTYEASMTR 595
Query: 474 HFYHGRTETMRSCTVEAVRWCQSMQDPSVNLRERQQKMLQAFAKHNKMMKDCSAGKGFDR 533
F GRTET+RSCT E+ + Q+M + S + + +A KH M + G G DR
Sbjct: 596 MFREGRTETVRSCTSESTAFVQAMMEGSHTKADLRDLFQKAAKKHQNMYRLAMTGAGIDR 655
Query: 534 HLLGLLLIAKEEGLPVP---ELFTDPLFSKSGGGGNFVLSTSLV--------------GY 576
HL L L++K G+ P E+ ++P + LSTS + +
Sbjct: 656 HLFCLYLVSKYLGVSSPFLAEVLSEP----------WRLSTSQIPQSQIRMFDPEQHPNH 705
Query: 577 LRVQGVVVPMVHNGYGFFYHIRDDRFV-VACSAWKSCPETDAEK 619
L G P+ +GYG Y I + + S+ S ET+A++
Sbjct: 706 LGAGGGFGPVADDGYGVSYMIAGENTIFFHISSKFSSSETNAQR 749
>gi|23238256 carnitine palmitoyltransferase 1B isoform a [Homo
sapiens]
Length = 772
Score = 211 bits (537), Expect = 2e-54
Identities = 179/644 (27%), Positives = 287/644 (44%), Gaps = 79/644 (12%)
Query: 4 QLAKSTEERTFQYQDSLPSLPVPSLEESLKKYLESVTRTCYQIRGLDPDAKRGFLDLTRE 63
+L S + +Q SLP LPVP + ++++YLES
Sbjct: 157 RLLSSRHPMLYSFQTSLPKLPVPRVSATIQRYLES------------------------- 191
Query: 64 GIQVKPFANQEEYKKTEEIVQKFQSGIGEKLHQKLLERAKGKRNWLEEWWLNVAYLDVRI 123
V+P + EEY + E + ++FQ +L + L+ ++ N++ +WW YL R
Sbjct: 192 ---VRPLLDDEEYYRMELLAKEFQDKTAPRLQKYLVLKSWWASNYVSDWWEEYIYLRGRS 248
Query: 124 PSQLNVNFAGPAAHFEHYWPPKEGTQLERGSITLWHNLNYWQLLRKEKV-PVHKVGNTPL 182
P +N N+ + Q R + + Y + L +E++ PV +G P+
Sbjct: 249 PLMVNSNY----YVMDLVLIKNTDVQAARLGNIIHAMIMYRRKLDREEIKPVMALGIVPM 304
Query: 183 DMNQFRMLFSTCKVPGITRDSIMNYFRTESEGRSPNHIVVLCRGRAFVFDVIHEGCLVTP 242
Q +F+T ++PG D + + S+ R H+ V +GR F + L+ P
Sbjct: 305 CSYQMERMFNTTRIPGKDTDVLQHL----SDSR---HVAVYHKGRFFKLWLYEGARLLKP 357
Query: 243 PELLRQLTYI-HKKCHSEPDGPGIAALTSEERTRWAKAREYLIGLDPENLALLEKIQSSL 301
+L Q I +P +AALT+ R WA+AR+ +N A LE I+ +
Sbjct: 358 QDLEMQFQRILDDPSPPQPGEEKLAALTAGGRVEWAQARQAFFS-SGKNKAALEAIERAA 416
Query: 302 LVYSMEDSSPHVTPEDYSEII---AAILIGDPTVRWGDKSYNLISFSNGVFGCNCDHAPF 358
++++ S PED + + A+L G+ RW DKS+ LISF NG G N +HA
Sbjct: 417 FFVALDEESYSYDPEDEASLSLYGKALLHGNCYNRWFDKSFTLISFKNGQLGLNAEHAWA 476
Query: 359 DAMIMVNISYYV-----DEKIFQNEGRWKGSEKVRDIPLPEELIFIVDEKVLNDINQAKA 413
DA I+ ++ +V + G G P P L + + ++ I +
Sbjct: 477 DAPIIGHLWEFVLGTDSFHLGYTETGHCLGKPNPALAP-PTRLQWDIPKQCQAVIESSYQ 535
Query: 414 QYLREASDLQIAAYAFTSFGKKLTKNKMLHPDTFIQLALQLAYYRLHGHPGCCYETAMTR 473
A D+++ + F FGK L K PD F+Q+ALQLA++R G YE +MTR
Sbjct: 536 VAKALADDVELYCFQFLPFGKGLIKKCRTSPDAFVQIALQLAHFRDRGKFCLTYEASMTR 595
Query: 474 HFYHGRTETMRSCTVEAVRWCQSMQDPSVNLRERQQKMLQAFAKHNKMMKDCSAGKGFDR 533
F GRTET+RSCT E+ + Q+M + S + + +A KH M + G G DR
Sbjct: 596 MFREGRTETVRSCTSESTAFVQAMMEGSHTKADLRDLFQKAAKKHQNMYRLAMTGAGIDR 655
Query: 534 HLLGLLLIAKEEGLPVP---ELFTDPLFSKSGGGGNFVLSTSLV--------------GY 576
HL L L++K G+ P E+ ++P + LSTS + +
Sbjct: 656 HLFCLYLVSKYLGVSSPFLAEVLSEP----------WRLSTSQIPQSQIRMFDPEQHPNH 705
Query: 577 LRVQGVVVPMVHNGYGFFYHIRDDRFV-VACSAWKSCPETDAEK 619
L G P+ +GYG Y I + + S+ S ET+A++
Sbjct: 706 LGAGGGFGPVADDGYGVSYMIAGENTIFFHISSKFSSSETNAQR 749
>gi|209862905 carnitine palmitoyltransferase 1C isoform 1 [Homo
sapiens]
Length = 792
Score = 199 bits (506), Expect = 7e-51
Identities = 184/652 (28%), Positives = 293/652 (44%), Gaps = 91/652 (13%)
Query: 14 FQYQDSLPSLPVPSLEESLKKYLESVTRTCYQIRGLDPDAKRGFLDLTREGIQVKPFANQ 73
F YQ SLP PVPS++++++KYLESV +P +
Sbjct: 165 FSYQRSLPRQPVPSVQDTVRKYLESV----------------------------RPILSD 196
Query: 74 EEYKKTEEIVQKFQSGIGEKLHQKLLERAKGKRNWLEEWWLNVAYLDVRIPSQLNVNFAG 133
E++ T + Q+F L L ++ N++ +WW YL R P +N N+
Sbjct: 197 EDFDWTAVLAQEFLRLQASLLQWYLRLKSWWASNYVSDWWEEFVYLRSRNPLMVNSNYYM 256
Query: 134 PAAHFEHYWPPKEGTQLERGSITLW-HNLNYWQLLRKEKVPVHKVGNTPLDMNQFRMLFS 192
AA + G + ++ L+ H LN R+E P +G PL Q+ +F+
Sbjct: 257 MAA--------RAGNAVH--ALLLYRHRLN-----RQEIPPTLLMGMRPLCSAQYEKIFN 301
Query: 193 TCKVPGITRDSIMNYFRTESEGRSPNHIVVLCRGRAFVFDVIHEGCLVTPPELLRQLTYI 252
T ++PG+ +D I + ++ H+ V RGR F L++P L +Q I
Sbjct: 302 TTRIPGVQKDYIRHLHDSQ-------HVAVFHRGRFFRMGTHSRNSLLSPRALEQQFQRI 354
Query: 253 -HKKCHSEPDGPGIAALTSEERTRWAKAREYLIGLDPENLALLEKIQSSLLVYSMEDSSP 311
+ P +AALT+ R WA+ R L + LE ++ + S++
Sbjct: 355 LDDPSPACPHEEHLAALTAAPRGTWAQVRT---SLKTQAAEALEAVEGAAFFVSLDAEPA 411
Query: 312 HVTPEDYSEIIAA----ILIGDPTVRWGDKSYNLISFSNGVFGCNCDHAPFDAMIMVNI- 366
+T ED + + A +L G RW DKS+ LI FSNG G + +H+ D I ++
Sbjct: 412 GLTREDPAASLDAYAHALLAGRGHDRWFDKSFTLIVFSNGKLGLSVEHSWADCPISGHMW 471
Query: 367 SYYVDEKIFQ----NEGRWKGSEKVRDIPLPEELIFIVDEKVLNDINQAK--AQYLREAS 420
+ + + FQ +G KG +P P+ L + + +++ + I+ A A+ L E
Sbjct: 472 EFTLATECFQLGYSTDGHCKGHPDPT-LPQPQRLQWDLPDQIHSSISLALRGAKILSENV 530
Query: 421 DLQIAAYAFTSFGKKLTKNKMLHPDTFIQLALQLAYYRLHGHPGCCYETAMTRHFYHGRT 480
D + F+ FGK + L D+FIQ+ALQLA++R G YE+AMTR F GRT
Sbjct: 531 DCHVVP--FSLFGKSFIRRCHLSSDSFIQIALQLAHFRDRGQFCLTYESAMTRLFLEGRT 588
Query: 481 ETMRSCTVEAVRWCQSMQDPSVNLRERQQKMLQAFAKHNKMMKDCSAGKGFDRHLLGLLL 540
ET+RSCT EA + ++M+D + A KH ++K +G+G DRHL L +
Sbjct: 589 ETVRSCTREACNFVRAMEDKEKTDPQCLALFRVAVDKHQALLKAAMSGQGVDRHLFALYI 648
Query: 541 IAKEEGLPVPELFTDPLFSKSGGGGNFVLSTSLV--------------GYLRVQGVVVPM 586
+++ L P F + S+ + LSTS + Y+ G P
Sbjct: 649 VSRFLHLQSP--FLTQVHSE-----QWQLSTSQIPVQQMHLFDVHNYPDYVSSGGGFGPA 701
Query: 587 VHNGYGFFYHIRDDRFVV-ACSAWKSCPETDAEKLVQLTFCAFHDMIQLMNS 637
+GYG Y D + S+ KS +TD+ +L Q A D+ L +
Sbjct: 702 DDHGYGVSYIFMGDGMITFHISSKKSSTKTDSHRLGQHIEDALLDVASLFQA 753
>gi|22748777 carnitine palmitoyltransferase 1C isoform 2 [Homo
sapiens]
Length = 803
Score = 198 bits (503), Expect = 1e-50
Identities = 180/652 (27%), Positives = 290/652 (44%), Gaps = 80/652 (12%)
Query: 14 FQYQDSLPSLPVPSLEESLKKYLESVTRTCYQIRGLDPDAKRGFLDLTREGIQVKPFANQ 73
F YQ SLP PVPS++++++KYLESV +P +
Sbjct: 165 FSYQRSLPRQPVPSVQDTVRKYLESV----------------------------RPILSD 196
Query: 74 EEYKKTEEIVQKFQSGIGEKLHQKLLERAKGKRNWLEEWWLNVAYLDVRIPSQLNVNFAG 133
E++ T + Q+F L L ++ N++ +WW YL R P +N N+
Sbjct: 197 EDFDWTAVLAQEFLRLQASLLQWYLRLKSWWASNYVSDWWEEFVYLRSRNPLMVNSNYY- 255
Query: 134 PAAHFEHYWPPKEGTQLERGSITLWHNLNYWQLLRKEKVP-VHKVGNTPLDMNQFRMLFS 192
+ + Q R + L Y L ++++P +G PL Q+ +F+
Sbjct: 256 ---MMDFLYVTPTPLQAARAGNAVHALLLYRHRLNRQEIPPTLLMGMRPLCSAQYEKIFN 312
Query: 193 TCKVPGITRDSIMNYFRTESEGRSPNHIVVLCRGRAFVFDVIHEGCLVTPPELLRQLTYI 252
T ++PG+ +D I + ++ H+ V RGR F L++P L +Q I
Sbjct: 313 TTRIPGVQKDYIRHLHDSQ-------HVAVFHRGRFFRMGTHSRNSLLSPRALEQQFQRI 365
Query: 253 -HKKCHSEPDGPGIAALTSEERTRWAKAREYLIGLDPENLALLEKIQSSLLVYSMEDSSP 311
+ P +AALT+ R WA+ R L + LE ++ + S++
Sbjct: 366 LDDPSPACPHEEHLAALTAAPRGTWAQVRT---SLKTQAAEALEAVEGAAFFVSLDAEPA 422
Query: 312 HVTPEDYSEIIAA----ILIGDPTVRWGDKSYNLISFSNGVFGCNCDHAPFDAMIMVNI- 366
+T ED + + A +L G RW DKS+ LI FSNG G + +H+ D I ++
Sbjct: 423 GLTREDPAASLDAYAHALLAGRGHDRWFDKSFTLIVFSNGKLGLSVEHSWADCPISGHMW 482
Query: 367 SYYVDEKIFQ----NEGRWKGSEKVRDIPLPEELIFIVDEKVLNDINQAK--AQYLREAS 420
+ + + FQ +G KG +P P+ L + + +++ + I+ A A+ L E
Sbjct: 483 EFTLATECFQLGYSTDGHCKGHPDPT-LPQPQRLQWDLPDQIHSSISLALRGAKILSENV 541
Query: 421 DLQIAAYAFTSFGKKLTKNKMLHPDTFIQLALQLAYYRLHGHPGCCYETAMTRHFYHGRT 480
D + F+ FGK + L D+FIQ+ALQLA++R G YE+AMTR F GRT
Sbjct: 542 DCHVVP--FSLFGKSFIRRCHLSSDSFIQIALQLAHFRDRGQFCLTYESAMTRLFLEGRT 599
Query: 481 ETMRSCTVEAVRWCQSMQDPSVNLRERQQKMLQAFAKHNKMMKDCSAGKGFDRHLLGLLL 540
ET+RSCT EA + ++M+D + A KH ++K +G+G DRHL L +
Sbjct: 600 ETVRSCTREACNFVRAMEDKEKTDPQCLALFRVAVDKHQALLKAAMSGQGVDRHLFALYI 659
Query: 541 IAKEEGLPVPELFTDPLFSKSGGGGNFVLSTSLV--------------GYLRVQGVVVPM 586
+++ L P F + S+ + LSTS + Y+ G P
Sbjct: 660 VSRFLHLQSP--FLTQVHSE-----QWQLSTSQIPVQQMHLFDVHNYPDYVSSGGGFGPA 712
Query: 587 VHNGYGFFYHIRDDRFVV-ACSAWKSCPETDAEKLVQLTFCAFHDMIQLMNS 637
+GYG Y D + S+ KS +TD+ +L Q A D+ L +
Sbjct: 713 DDHGYGVSYIFMGDGMITFHISSKKSSTKTDSHRLGQHIEDALLDVASLFQA 764
>gi|223468670 carnitine palmitoyltransferase 1B isoform c [Homo
sapiens]
Length = 738
Score = 197 bits (500), Expect = 3e-50
Identities = 167/583 (28%), Positives = 266/583 (45%), Gaps = 55/583 (9%)
Query: 67 VKPFANQEEYKKTEEIVQKFQSGIGEKLHQKLLERAKGKRNWLEEWWLNVAYLDVRIPSQ 126
V+P + EEY + E + ++FQ +L + L+ ++ N++ +WW YL R P
Sbjct: 158 VRPLLDDEEYYRMELLAKEFQDKTAPRLQKYLVLKSWWASNYVSDWWEEYIYLRGRSPLM 217
Query: 127 LNVNFAGPAAHFEHYWPPKEGTQLERGSITLWHNLNYWQLLRKEKV-PVHKVGNTPLDMN 185
+N N+ + Q R + + Y + L +E++ PV +G P+
Sbjct: 218 VNSNYYV----MDLVLIKNTDVQAARLGNIIHAMIMYRRKLDREEIKPVMALGIVPMCSY 273
Query: 186 QFRMLFSTCKVPGITRDSIMNYFRTESEGRSPNHIVVLCRGRAFVFDVIHEGCLVTPPEL 245
Q +F+T ++PG D + + S+ R H+ V +GR F + L+ P +L
Sbjct: 274 QMERMFNTTRIPGKDTDVLQHL----SDSR---HVAVYHKGRFFKLWLYEGARLLKPQDL 326
Query: 246 LRQLTYIHKKCHSEPDGPG---IAALTSEERTRWAKAREYLIGLDPENLALLEKIQSSLL 302
Q I P PG +AALT+ R WA+AR+ +N A LE I+ +
Sbjct: 327 EMQFQRILDD--PSPPQPGEEKLAALTAGGRVEWAQARQAFFS-SGKNKAALEAIERAAF 383
Query: 303 VYSMEDSSPHVTPEDYSEIIA---AILIGDPTVRWGDKSYNLISFSNGVFGCNCDHAPFD 359
++++ S PED + + A+L G+ RW DKS+ LISF NG G N +HA D
Sbjct: 384 FVALDEESYSYDPEDEASLSLYGKALLHGNCYNRWFDKSFTLISFKNGQLGLNAEHAWAD 443
Query: 360 AMIMVNISYYV-----DEKIFQNEGRWKGSEKVRDIPLPEELIFIVDEKVLNDINQAKAQ 414
A I+ ++ +V + G G P P L + + ++ I +
Sbjct: 444 APIIGHLWEFVLGTDSFHLGYTETGHCLGKPNPALAP-PTRLQWDIPKQCQAVIESSYQV 502
Query: 415 YLREASDLQIAAYAFTSFGKKLTKNKMLHPDTFIQLALQLAYYRLHGHPGCCYETAMTRH 474
A D+++ + F FGK L K PD F+Q+ALQLA++R G YE +MTR
Sbjct: 503 AKALADDVELYCFQFLPFGKGLIKKCRTSPDAFVQIALQLAHFRDRGKFCLTYEASMTRM 562
Query: 475 FYHGRTETMRSCTVEAVRWCQSMQDPSVNLRERQQKMLQAFAKHNKMMKDCSAGKGFDRH 534
F GRTET+RSCT E+ + Q+M + S + + +A KH M + G G DRH
Sbjct: 563 FREGRTETVRSCTSESTAFVQAMMEGSHTKADLRDLFQKAAKKHQNMYRLAMTGAGIDRH 622
Query: 535 LLGLLLIAKEEGLPVP---ELFTDPLFSKSGGGGNFVLSTSLV--------------GYL 577
L L L++K G+ P E+ ++P + LSTS + +L
Sbjct: 623 LFCLYLVSKYLGVSSPFLAEVLSEP----------WRLSTSQIPQSQIRMFDPEQHPNHL 672
Query: 578 RVQGVVVPMVHNGYGFFYHIRDDRFV-VACSAWKSCPETDAEK 619
G P+ +GYG Y I + + S+ S ET+A++
Sbjct: 673 GAGGGFGPVADDGYGVSYMIAGENTIFFHISSKFSSSETNAQR 715
>gi|223468674 carnitine palmitoyltransferase 1B isoform d [Homo
sapiens]
Length = 691
Score = 127 bits (319), Expect = 3e-29
Identities = 100/319 (31%), Positives = 149/319 (46%), Gaps = 34/319 (10%)
Query: 324 AILIGDPTVRWGDKSYNLISFSNGVFGCNCDHAPFDAMIMVNISYYV-----DEKIFQNE 378
A+L G+ RW DKS+ LISF NG G N +HA DA I+ ++ +V +
Sbjct: 361 ALLHGNCYNRWFDKSFTLISFKNGQLGLNAEHAWADAPIIGHLWEFVLGTDSFHLGYTET 420
Query: 379 GRWKGSEKVRDIPLPEELIFIVDEKVLNDINQAKAQYLREASDLQIAAYAFTSFGKKLTK 438
G G P P L + + ++ I + A D+++ + F FGK L K
Sbjct: 421 GHCLGKPNPALAP-PTRLQWDIPKQCQAVIESSYQVAKALADDVELYCFQFLPFGKGLIK 479
Query: 439 NKMLHPDTFIQLALQLAYYRLHGHPGCCYETAMTRHFYHGRTETMRSCTVEAVRWCQSMQ 498
PD F+Q+ALQLA++R G YE +MTR F GRTET+RSCT E+ + Q+M
Sbjct: 480 KCRTSPDAFVQIALQLAHFRDRGKFCLTYEASMTRMFREGRTETVRSCTSESTAFVQAMM 539
Query: 499 DPSVNLRERQQKMLQAFAKHNKMMKDCSAGKGFDRHLLGLLLIAKEEGLPVP---ELFTD 555
+ S + + +A KH M + G G DRHL L L++K G+ P E+ ++
Sbjct: 540 EGSHTKADLRDLFQKAAKKHQNMYRLAMTGAGIDRHLFCLYLVSKYLGVSSPFLAEVLSE 599
Query: 556 PLFSKSGGGGNFVLSTSLV--------------GYLRVQGVVVPMVHNGYGFFYHIRDDR 601
P + LSTS + +L G P+ +GYG Y I +
Sbjct: 600 P----------WRLSTSQIPQSQIRMFDPEQHPNHLGAGGGFGPVADDGYGVSYMIAGEN 649
Query: 602 FV-VACSAWKSCPETDAEK 619
+ S+ S ET+A++
Sbjct: 650 TIFFHISSKFSSSETNAQR 668
Score = 69.7 bits (169), Expect = 8e-12
Identities = 55/227 (24%), Positives = 97/227 (42%), Gaps = 40/227 (17%)
Query: 4 QLAKSTEERTFQYQDSLPSLPVPSLEESLKKYLESVTRTCYQIRGLDPDAKRGFLDLTRE 63
+L S + +Q SLP LPVP + ++++YLES
Sbjct: 157 RLLSSRHPMLYSFQTSLPKLPVPRVSATIQRYLES------------------------- 191
Query: 64 GIQVKPFANQEEYKKTEEIVQKFQSGIGEKLHQKLLERAKGKRNWLEEWWLNVAYLDVRI 123
V+P + EEY + E + ++FQ +L + L+ ++ N++ +WW YL R
Sbjct: 192 ---VRPLLDDEEYYRMELLAKEFQDKTAPRLQKYLVLKSWWASNYVSDWWEEYIYLRGRS 248
Query: 124 PSQLNVNFAGPAAHFEHYWPPKEGTQLERGSITLWHNLNYWQLLRKEKV-PVHKVGNTPL 182
P +N N+ + Q R + + Y + L +E++ PV +G P+
Sbjct: 249 PLMVNSNY----YVMDLVLIKNTDVQAARLGNIIHAMIMYRRKLDREEIKPVMALGIVPM 304
Query: 183 DMNQFRMLFSTCKVPGITRDSIMNYFRTESEGRSPNHIVVLCRGRAF 229
Q +F+T ++PG D + + S+ R H+ V +GR F
Sbjct: 305 CSYQMERMFNTTRIPGKDTDVLQHL----SDSR---HVAVYHKGRFF 344
>gi|38202205 zinc finger, FYVE domain containing 26 [Homo sapiens]
Length = 2539
Score = 33.5 bits (75), Expect = 0.62
Identities = 30/88 (34%), Positives = 40/88 (45%), Gaps = 6/88 (6%)
Query: 235 HEGCLVTPPELLRQLTYIHKKCHSEPDGPGIAALTSEERTRWAKAREYLIGL-DPENLAL 293
H C L L + + PG A L S T A+ ++YL + D L L
Sbjct: 518 HSQCQDCKDSLSEDLASATEPANDSLSSPGAANLFS---TYLARCQQYLCSIPDSLCLEL 574
Query: 294 LEKIQSSLLVYSME-DSSPHVTPEDYSE 320
LE I S LL+ S + PH+ PEDY+E
Sbjct: 575 LENIFSLLLITSADLHPEPHL-PEDYAE 601
>gi|237858621 polyamine modulated factor 1 binding protein 1 isoform
b [Homo sapiens]
Length = 882
Score = 32.0 bits (71), Expect = 1.8
Identities = 51/196 (26%), Positives = 79/196 (40%), Gaps = 21/196 (10%)
Query: 28 LEESLKKYLESVTRTCYQIRGLDPDAKRGFLDLTREGIQVKPFANQEEYKKTEEIVQKFQ 87
LEE + Y E + + ++R L RGF + ++V F KK EE+ Q
Sbjct: 631 LEEEIIAYEERMKKLNTELRKL-----RGFHQESE--LEVHAFD-----KKLEEM--SCQ 676
Query: 88 SGIGEKLHQKLLERAKGKRNWLEEWWLNVAYLDVRIPSQLNVNFAGPAAHFEHYWPPKEG 147
+K HQ L+ K L E+ +A L + P + PK+
Sbjct: 677 VLQWQKQHQNDLKMLAAKEEQLREFQEEMAALKENLLEDDKEPCCLP-----QWSVPKDT 731
Query: 148 TQLERGSITLWHNLNYWQLLRKEKVPVHKVGNTPLDMNQFRMLFSTCKVPGITRDSIMNY 207
+L RG+ + NL W +++KV K+GN + ++ S K TR S N
Sbjct: 732 CRLYRGNDQIMTNLEQW--AKQQKVANEKLGNQLREQVKYIAKLSGEKDREPTRASSPNT 789
Query: 208 FRTESEGRSPNHIVVL 223
R S S H V++
Sbjct: 790 TRPSSPSHSHLHSVMV 805
>gi|91208426 U5 snRNP-specific protein [Homo sapiens]
Length = 2335
Score = 32.0 bits (71), Expect = 1.8
Identities = 28/136 (20%), Positives = 59/136 (43%), Gaps = 24/136 (17%)
Query: 278 KAREYLIGLDPENLALLEKIQSSLLVYSMEDSSPHVTPEDYSEIIAAILIGDPTVRWGDK 337
+A ++ +P L E+I+ L +YS E + P+++ ++Y E+ + +I W
Sbjct: 1728 QAMAKIMKANPALYVLRERIRKGLQLYSSEPTEPYLSSQNYGELFSNQII------WFVD 1781
Query: 338 SYNLISFS-NGVFGCNCDHAPFDAMI-------------MVNISYYVDEKIFQNEGRWKG 383
N+ + + F N P + I +++ S + +K +WK
Sbjct: 1782 DTNVYRVTIHKTFEGNLTTKPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKT 1841
Query: 384 SEKV----RDIPLPEE 395
+E+V R +P+ E+
Sbjct: 1842 AEEVAALIRSLPVEEQ 1857
>gi|20127408 mitochondrial trifunctional protein, alpha subunit
precursor [Homo sapiens]
Length = 763
Score = 32.0 bits (71), Expect = 1.8
Identities = 23/73 (31%), Positives = 33/73 (45%), Gaps = 5/73 (6%)
Query: 21 PSLPVPSLEESLKKYLESVTRTCYQ---IRGLDPDAKRGFLDLTREGIQVKPFANQEEYK 77
P L P EE +YLE V T + + + P +G ++ PF Q+ YK
Sbjct: 227 PGLKPP--EERTIEYLEEVAITFAKGLADKKISPKRDKGLVEKLTAYAMTIPFVRQQVYK 284
Query: 78 KTEEIVQKFQSGI 90
K EE V+K G+
Sbjct: 285 KVEEKVRKQTKGL 297
>gi|132814467 glutamyl aminopeptidase [Homo sapiens]
Length = 957
Score = 30.8 bits (68), Expect = 4.0
Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 8/57 (14%)
Query: 68 KPFANQEEYKKTEEIVQKF-QSGIGEKLHQKLLERAKGKRNWLE-------EWWLNV 116
+PF + + + E K+ Q+G GEK +++LE K WL+ EW+ N+
Sbjct: 897 EPFNTELQLWQMESFFAKYPQAGAGEKPREQVLETVKNNIEWLKQHRNTIREWFFNL 953
>gi|4505245 mannose receptor C type 1 precursor [Homo sapiens]
Length = 1456
Score = 30.4 bits (67), Expect = 5.2
Identities = 14/46 (30%), Positives = 24/46 (52%)
Query: 265 IAALTSEERTRWAKAREYLIGLDPENLALLEKIQSSLLVYSMEDSS 310
I EER W +AR+ IG +++ + + + L Y M+DS+
Sbjct: 959 IFGFMEEERKNWQEARKACIGFGGNLVSIQNEKEQAFLTYHMKDST 1004
>gi|57546917 mannose receptor, C type 1-like 1 [Homo sapiens]
Length = 1456
Score = 30.4 bits (67), Expect = 5.2
Identities = 14/46 (30%), Positives = 24/46 (52%)
Query: 265 IAALTSEERTRWAKAREYLIGLDPENLALLEKIQSSLLVYSMEDSS 310
I EER W +AR+ IG +++ + + + L Y M+DS+
Sbjct: 959 IFGFMEEERKNWQEARKACIGFGGNLVSIQNEKEQAFLTYHMKDST 1004
>gi|117968420 NUF2, NDC80 kinetochore complex component [Homo
sapiens]
Length = 464
Score = 29.6 bits (65), Expect = 8.9
Identities = 12/42 (28%), Positives = 22/42 (52%)
Query: 63 EGIQVKPFANQEEYKKTEEIVQKFQSGIGEKLHQKLLERAKG 104
E + P QEE+K+ + +Q+ Q + + HQK + +G
Sbjct: 167 ERLDSVPVEEQEEFKQLSDGIQELQQSLNQDFHQKTIVLQEG 208
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.321 0.137 0.422
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 25,884,736
Number of Sequences: 37866
Number of extensions: 1198877
Number of successful extensions: 2551
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 2397
Number of HSP's gapped (non-prelim): 53
length of query: 640
length of database: 18,247,518
effective HSP length: 109
effective length of query: 531
effective length of database: 14,120,124
effective search space: 7497785844
effective search space used: 7497785844
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.