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Search of human proteins with 221307485
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|221307485 lengsin, lens protein with glutamine synthetase
domain isoform a [Homo sapiens]
(509 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|221307485 lengsin, lens protein with glutamine synthetase dom... 1027 0.0
gi|221307490 lengsin, lens protein with glutamine synthetase dom... 360 2e-99
gi|74271826 glutamine synthetase [Homo sapiens] 34 0.28
gi|74271837 glutamine synthetase [Homo sapiens] 34 0.28
gi|19923206 glutamine synthetase [Homo sapiens] 34 0.28
gi|110349767 calcium channel, voltage-dependent, L type, alpha 1... 31 3.0
gi|94557290 myeloid inhibitory C-type lectin-like receptor isofo... 30 5.2
gi|94557293 myeloid inhibitory C-type lectin-like receptor isofo... 30 5.2
gi|193290160 CTAGE family, member 4 [Homo sapiens] 29 8.9
gi|56847634 hypothetical protein LOC441294 [Homo sapiens] 29 8.9
>gi|221307485 lengsin, lens protein with glutamine synthetase domain
isoform a [Homo sapiens]
Length = 509
Score = 1027 bits (2655), Expect = 0.0
Identities = 509/509 (100%), Positives = 509/509 (100%)
Query: 1 MNNEEDLLQEDSTRDEGNETEANSMNTLRRTRKKVTKPYVCSTEVGETDMSNSNDCMRDS 60
MNNEEDLLQEDSTRDEGNETEANSMNTLRRTRKKVTKPYVCSTEVGETDMSNSNDCMRDS
Sbjct: 1 MNNEEDLLQEDSTRDEGNETEANSMNTLRRTRKKVTKPYVCSTEVGETDMSNSNDCMRDS 60
Query: 61 SQILTPPQLSSRMKHIRQAMAKNRLQFVRFEATDLHGVSRSKTIPAHFFQEKVSHGVCMP 120
SQILTPPQLSSRMKHIRQAMAKNRLQFVRFEATDLHGVSRSKTIPAHFFQEKVSHGVCMP
Sbjct: 61 SQILTPPQLSSRMKHIRQAMAKNRLQFVRFEATDLHGVSRSKTIPAHFFQEKVSHGVCMP 120
Query: 121 RGYLEVIPNPKDNEMNNIRATCFNSDIVLMPELSTFRVLPWADRTARVICDTFTVTGEPL 180
RGYLEVIPNPKDNEMNNIRATCFNSDIVLMPELSTFRVLPWADRTARVICDTFTVTGEPL
Sbjct: 121 RGYLEVIPNPKDNEMNNIRATCFNSDIVLMPELSTFRVLPWADRTARVICDTFTVTGEPL 180
Query: 181 LTSPRYIAKRQLSHLQASGFSLLSAFIYDFCIFGVPEILNSKIISFPALTFLNNHDQPFM 240
LTSPRYIAKRQLSHLQASGFSLLSAFIYDFCIFGVPEILNSKIISFPALTFLNNHDQPFM
Sbjct: 181 LTSPRYIAKRQLSHLQASGFSLLSAFIYDFCIFGVPEILNSKIISFPALTFLNNHDQPFM 240
Query: 241 QELVDGLYHTGANVESFSSSTRPGQMEISFLPEFGISSADNAFTLRTGVKEVARKYNYIA 300
QELVDGLYHTGANVESFSSSTRPGQMEISFLPEFGISSADNAFTLRTGVKEVARKYNYIA
Sbjct: 241 QELVDGLYHTGANVESFSSSTRPGQMEISFLPEFGISSADNAFTLRTGVKEVARKYNYIA 300
Query: 301 SFFIETGFCDSGILSHSLWDVDRKKNMFCSTSGTEQLTITGKKWLAGLLKHSAALSCLMA 360
SFFIETGFCDSGILSHSLWDVDRKKNMFCSTSGTEQLTITGKKWLAGLLKHSAALSCLMA
Sbjct: 301 SFFIETGFCDSGILSHSLWDVDRKKNMFCSTSGTEQLTITGKKWLAGLLKHSAALSCLMA 360
Query: 361 PSVSCRKRYSKDRKDLKKSVPTTWGYNDNSCIFNIKCHGEKGTRIENKLGSATANPYLVL 420
PSVSCRKRYSKDRKDLKKSVPTTWGYNDNSCIFNIKCHGEKGTRIENKLGSATANPYLVL
Sbjct: 361 PSVSCRKRYSKDRKDLKKSVPTTWGYNDNSCIFNIKCHGEKGTRIENKLGSATANPYLVL 420
Query: 421 AATVAAGLDGLHSSNEVLAGPDESTDFYQVEPSEIPLKLEDALVALEEDQCLRQALGETF 480
AATVAAGLDGLHSSNEVLAGPDESTDFYQVEPSEIPLKLEDALVALEEDQCLRQALGETF
Sbjct: 421 AATVAAGLDGLHSSNEVLAGPDESTDFYQVEPSEIPLKLEDALVALEEDQCLRQALGETF 480
Query: 481 IRYFVAMKKYELENEEIAAERNKFLEYFI 509
IRYFVAMKKYELENEEIAAERNKFLEYFI
Sbjct: 481 IRYFVAMKKYELENEEIAAERNKFLEYFI 509
>gi|221307490 lengsin, lens protein with glutamine synthetase domain
isoform b [Homo sapiens]
Length = 208
Score = 360 bits (924), Expect = 2e-99
Identities = 176/176 (100%), Positives = 176/176 (100%)
Query: 1 MNNEEDLLQEDSTRDEGNETEANSMNTLRRTRKKVTKPYVCSTEVGETDMSNSNDCMRDS 60
MNNEEDLLQEDSTRDEGNETEANSMNTLRRTRKKVTKPYVCSTEVGETDMSNSNDCMRDS
Sbjct: 1 MNNEEDLLQEDSTRDEGNETEANSMNTLRRTRKKVTKPYVCSTEVGETDMSNSNDCMRDS 60
Query: 61 SQILTPPQLSSRMKHIRQAMAKNRLQFVRFEATDLHGVSRSKTIPAHFFQEKVSHGVCMP 120
SQILTPPQLSSRMKHIRQAMAKNRLQFVRFEATDLHGVSRSKTIPAHFFQEKVSHGVCMP
Sbjct: 61 SQILTPPQLSSRMKHIRQAMAKNRLQFVRFEATDLHGVSRSKTIPAHFFQEKVSHGVCMP 120
Query: 121 RGYLEVIPNPKDNEMNNIRATCFNSDIVLMPELSTFRVLPWADRTARVICDTFTVT 176
RGYLEVIPNPKDNEMNNIRATCFNSDIVLMPELSTFRVLPWADRTARVICDTFTVT
Sbjct: 121 RGYLEVIPNPKDNEMNNIRATCFNSDIVLMPELSTFRVLPWADRTARVICDTFTVT 176
>gi|74271826 glutamine synthetase [Homo sapiens]
Length = 373
Score = 34.3 bits (77), Expect = 0.28
Identities = 43/190 (22%), Positives = 77/190 (40%), Gaps = 16/190 (8%)
Query: 124 LEVIPNPKDNEMNNIRATCFNSDIVLMPELSTFRVLPWADRTARVICDTFTVTGEPLLTS 183
+E +P + + +++ NSD+ L+P + FR D V+C+ F P T+
Sbjct: 54 VEELPEWNFDGSSTLQSEGSNSDMYLVPA-AMFRDPFRKDPNKLVLCEVFKYNRRPAETN 112
Query: 184 PRYIAKRQLSHL--QASGFSLLSAFIY---DFCIFGVPEILNSKIISFPALTFLNN--HD 236
R+ KR + + Q F + + D FG P S P + D
Sbjct: 113 LRHTCKRIMDMVSNQHPWFGMEQEYTLMGTDGHPFGWP----SNGFPGPQGPYYCGVGAD 168
Query: 237 QPFMQELVDGLY----HTGANVESFSSSTRPGQMEISFLPEFGISSADNAFTLRTGVKEV 292
+ + +++V+ Y + G + ++ P Q E P GIS D+ + R + V
Sbjct: 169 RAYGRDIVEAHYRACLYAGVKIAGTNAEVMPAQWEFQIGPCEGISMGDHLWVARFILHRV 228
Query: 293 ARKYNYIASF 302
+ IA+F
Sbjct: 229 CEDFGVIATF 238
>gi|74271837 glutamine synthetase [Homo sapiens]
Length = 373
Score = 34.3 bits (77), Expect = 0.28
Identities = 43/190 (22%), Positives = 77/190 (40%), Gaps = 16/190 (8%)
Query: 124 LEVIPNPKDNEMNNIRATCFNSDIVLMPELSTFRVLPWADRTARVICDTFTVTGEPLLTS 183
+E +P + + +++ NSD+ L+P + FR D V+C+ F P T+
Sbjct: 54 VEELPEWNFDGSSTLQSEGSNSDMYLVPA-AMFRDPFRKDPNKLVLCEVFKYNRRPAETN 112
Query: 184 PRYIAKRQLSHL--QASGFSLLSAFIY---DFCIFGVPEILNSKIISFPALTFLNN--HD 236
R+ KR + + Q F + + D FG P S P + D
Sbjct: 113 LRHTCKRIMDMVSNQHPWFGMEQEYTLMGTDGHPFGWP----SNGFPGPQGPYYCGVGAD 168
Query: 237 QPFMQELVDGLY----HTGANVESFSSSTRPGQMEISFLPEFGISSADNAFTLRTGVKEV 292
+ + +++V+ Y + G + ++ P Q E P GIS D+ + R + V
Sbjct: 169 RAYGRDIVEAHYRACLYAGVKIAGTNAEVMPAQWEFQIGPCEGISMGDHLWVARFILHRV 228
Query: 293 ARKYNYIASF 302
+ IA+F
Sbjct: 229 CEDFGVIATF 238
>gi|19923206 glutamine synthetase [Homo sapiens]
Length = 373
Score = 34.3 bits (77), Expect = 0.28
Identities = 43/190 (22%), Positives = 77/190 (40%), Gaps = 16/190 (8%)
Query: 124 LEVIPNPKDNEMNNIRATCFNSDIVLMPELSTFRVLPWADRTARVICDTFTVTGEPLLTS 183
+E +P + + +++ NSD+ L+P + FR D V+C+ F P T+
Sbjct: 54 VEELPEWNFDGSSTLQSEGSNSDMYLVPA-AMFRDPFRKDPNKLVLCEVFKYNRRPAETN 112
Query: 184 PRYIAKRQLSHL--QASGFSLLSAFIY---DFCIFGVPEILNSKIISFPALTFLNN--HD 236
R+ KR + + Q F + + D FG P S P + D
Sbjct: 113 LRHTCKRIMDMVSNQHPWFGMEQEYTLMGTDGHPFGWP----SNGFPGPQGPYYCGVGAD 168
Query: 237 QPFMQELVDGLY----HTGANVESFSSSTRPGQMEISFLPEFGISSADNAFTLRTGVKEV 292
+ + +++V+ Y + G + ++ P Q E P GIS D+ + R + V
Sbjct: 169 RAYGRDIVEAHYRACLYAGVKIAGTNAEVMPAQWEFQIGPCEGISMGDHLWVARFILHRV 228
Query: 293 ARKYNYIASF 302
+ IA+F
Sbjct: 229 CEDFGVIATF 238
>gi|110349767 calcium channel, voltage-dependent, L type, alpha 1S
subunit [Homo sapiens]
Length = 1873
Score = 30.8 bits (68), Expect = 3.0
Identities = 22/78 (28%), Positives = 35/78 (44%), Gaps = 1/78 (1%)
Query: 401 KGTRIENKLGSATANPYLVLAATVAAGLDGLHS-SNEVLAGPDESTDFYQVEPSEIPLKL 459
+ TR SA A L+ A V GL L + +N ++A D Q+EP E+ +
Sbjct: 1770 RSTRENTSRCSAPATALLIQKALVRGGLGTLAADANFIMATGQALADACQMEPEEVEIMA 1829
Query: 460 EDALVALEEDQCLRQALG 477
+ L E + + +LG
Sbjct: 1830 TELLKGREAPEGMASSLG 1847
>gi|94557290 myeloid inhibitory C-type lectin-like receptor isoform
alpha [Homo sapiens]
Length = 265
Score = 30.0 bits (66), Expect = 5.2
Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 3/55 (5%)
Query: 365 CRKRYSKDRKDLKKSVPTTWGYNDNSCIFNIKCHGEKGTRIENKLGSATANPYLV 419
CR+ YSK+++ K P W ++ +SC F + T E+K+ A N L+
Sbjct: 118 CRELYSKEQEHKCKPCPRRWIWHKDSCYF---LSDDVQTWQESKMACAAQNASLL 169
>gi|94557293 myeloid inhibitory C-type lectin-like receptor isoform
beta [Homo sapiens]
Length = 232
Score = 30.0 bits (66), Expect = 5.2
Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 3/55 (5%)
Query: 365 CRKRYSKDRKDLKKSVPTTWGYNDNSCIFNIKCHGEKGTRIENKLGSATANPYLV 419
CR+ YSK+++ K P W ++ +SC F + T E+K+ A N L+
Sbjct: 85 CRELYSKEQEHKCKPCPRRWIWHKDSCYF---LSDDVQTWQESKMACAAQNASLL 136
>gi|193290160 CTAGE family, member 4 [Homo sapiens]
Length = 777
Score = 29.3 bits (64), Expect = 8.9
Identities = 24/119 (20%), Positives = 54/119 (45%), Gaps = 9/119 (7%)
Query: 1 MNNEEDLLQEDSTRDEGNETEANSM--------NTLRRTRKKVTKPYVCSTEVGETDMSN 52
M ++ +L+ED+T D+ E E NS + L+ KK+ + + +
Sbjct: 276 MKDQAAVLEEDTTDDDNLELEVNSQWENGANLDDPLKGALKKLIHAAKLNVSLKSLEGER 335
Query: 53 SNDCMRDSSQILTPPQLSSRMKHIRQAMAKNRLQFVRFEATDLHGVSRSKTIPAHFFQE 111
++ ++ S T +L+ +K+++ A + + + FE+ + + + I F+QE
Sbjct: 336 NHIIIQLSEVDKTKEELTEHIKNLQTQQASLQSENIYFESEN-QKLQQKLKIMTEFYQE 393
>gi|56847634 hypothetical protein LOC441294 [Homo sapiens]
Length = 777
Score = 29.3 bits (64), Expect = 8.9
Identities = 24/119 (20%), Positives = 54/119 (45%), Gaps = 9/119 (7%)
Query: 1 MNNEEDLLQEDSTRDEGNETEANSM--------NTLRRTRKKVTKPYVCSTEVGETDMSN 52
M ++ +L+ED+T D+ E E NS + L+ KK+ + + +
Sbjct: 276 MKDQAAVLEEDTTDDDNLELEVNSQWENGANLDDPLKGALKKLIHAAKLNVSLKSLEGER 335
Query: 53 SNDCMRDSSQILTPPQLSSRMKHIRQAMAKNRLQFVRFEATDLHGVSRSKTIPAHFFQE 111
++ ++ S T +L+ +K+++ A + + + FE+ + + + I F+QE
Sbjct: 336 NHIIIQLSEVDKTKEELTEHIKNLQTQQASLQSENIYFESEN-QKLQQKLKIMTEFYQE 393
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.133 0.391
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,706,930
Number of Sequences: 37866
Number of extensions: 806794
Number of successful extensions: 1901
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 1899
Number of HSP's gapped (non-prelim): 10
length of query: 509
length of database: 18,247,518
effective HSP length: 107
effective length of query: 402
effective length of database: 14,195,856
effective search space: 5706734112
effective search space used: 5706734112
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.