Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 217330622
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|217330622 phosphoinositide-3-kinase, regulatory subunit 5
[Homo sapiens]
(880 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|217330639 phosphoinositide-3-kinase, regulatory subunit 5 [Ho... 1767 0.0
gi|217330622 phosphoinositide-3-kinase, regulatory subunit 5 [Ho... 1767 0.0
gi|58082081 phosphoinositide-3-kinase, regulatory subunit 6 [Hom... 119 1e-26
gi|29789058 WW and C2 domain containing 1 isoform 3 [Homo sapiens] 41 0.004
gi|242247257 WW and C2 domain containing 1 isoform 2 [Homo sapiens] 40 0.012
gi|242247251 WW and C2 domain containing 1 isoform 1 [Homo sapiens] 40 0.012
gi|55741677 SET domain containing 1A [Homo sapiens] 39 0.016
gi|226509740 SR-related CTD-associated factor 1 [Homo sapiens] 39 0.021
gi|23397642 GREB1 protein isoform a [Homo sapiens] 38 0.047
gi|23065526 growth arrest-specific 2 like 1 isoform a [Homo sapi... 37 0.062
gi|19923777 growth arrest-specific 2 like 1 isoform a [Homo sapi... 37 0.062
gi|166795264 AE binding protein 2 isoform b [Homo sapiens] 37 0.062
gi|166795262 AE binding protein 2 isoform a [Homo sapiens] 37 0.062
gi|54859722 nucleoporin 160kDa [Homo sapiens] 37 0.081
gi|115511012 coiled-coil domain containing 136 [Homo sapiens] 37 0.081
gi|168823443 RAD54-like 2 [Homo sapiens] 37 0.11
gi|40254891 hypothetical protein FLJ20674 [Homo sapiens] 36 0.14
gi|119709834 castor homolog 1, zinc finger isoform a [Homo sapiens] 36 0.14
gi|42741684 zinc finger protein 265 isoform 1 [Homo sapiens] 36 0.14
gi|210032580 SET domain containing 1B [Homo sapiens] 36 0.14
gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens] 36 0.14
gi|189409130 zinc finger E-box binding homeobox 1 isoform a [Hom... 36 0.18
gi|189409128 zinc finger E-box binding homeobox 1 isoform b [Hom... 36 0.18
gi|116089335 BR serine/threonine kinase 2 [Homo sapiens] 35 0.23
gi|93141033 PAX interacting protein 1 [Homo sapiens] 35 0.23
gi|17975763 myelin transcription factor 1 [Homo sapiens] 35 0.23
gi|122937247 unc-13 homolog A [Homo sapiens] 35 0.23
gi|86262149 zinc finger and BTB domain containing 7C [Homo sapiens] 35 0.31
gi|38373682 pleckstrin homology domain containing family G membe... 35 0.31
gi|111154084 pleckstrin homology domain containing family G memb... 35 0.31
>gi|217330639 phosphoinositide-3-kinase, regulatory subunit 5 [Homo
sapiens]
Length = 880
Score = 1767 bits (4577), Expect = 0.0
Identities = 880/880 (100%), Positives = 880/880 (100%)
Query: 1 MQPGATTCTEDRIQHALERCLHGLSLSRRSTSWSAGLCLNCWSLQELVSRDPGHFLILLE 60
MQPGATTCTEDRIQHALERCLHGLSLSRRSTSWSAGLCLNCWSLQELVSRDPGHFLILLE
Sbjct: 1 MQPGATTCTEDRIQHALERCLHGLSLSRRSTSWSAGLCLNCWSLQELVSRDPGHFLILLE 60
Query: 61 QILQKTREVQEKGTYDLLTPLALLFYSTVLCTPHFPPDSDLLLKAASTYHRFLTWPVPYC 120
QILQKTREVQEKGTYDLLTPLALLFYSTVLCTPHFPPDSDLLLKAASTYHRFLTWPVPYC
Sbjct: 61 QILQKTREVQEKGTYDLLTPLALLFYSTVLCTPHFPPDSDLLLKAASTYHRFLTWPVPYC 120
Query: 121 SICQELLTFIDAELKAPGISYQRLVRAEQGLPIRSHRSSTVTVLLLNPVEVQAEFLAVAN 180
SICQELLTFIDAELKAPGISYQRLVRAEQGLPIRSHRSSTVTVLLLNPVEVQAEFLAVAN
Sbjct: 121 SICQELLTFIDAELKAPGISYQRLVRAEQGLPIRSHRSSTVTVLLLNPVEVQAEFLAVAN 180
Query: 181 KLSTPGHSPHSAYTTLLLHAFQATFGAHCDVPGLHCRLQAKTLAELEDIFTETAEAQELA 240
KLSTPGHSPHSAYTTLLLHAFQATFGAHCDVPGLHCRLQAKTLAELEDIFTETAEAQELA
Sbjct: 181 KLSTPGHSPHSAYTTLLLHAFQATFGAHCDVPGLHCRLQAKTLAELEDIFTETAEAQELA 240
Query: 241 SGIGDAAEARRWLRTKLQAVGEKAGFPGVLDTAKPGKLHTIPIPVARCYTYSWSQDSFDI 300
SGIGDAAEARRWLRTKLQAVGEKAGFPGVLDTAKPGKLHTIPIPVARCYTYSWSQDSFDI
Sbjct: 241 SGIGDAAEARRWLRTKLQAVGEKAGFPGVLDTAKPGKLHTIPIPVARCYTYSWSQDSFDI 300
Query: 301 LQEILLKEQELLQPGILGDDEEEEEEEEEVEEDLETDGHCAERDSLLSTSSLASHDSTLS 360
LQEILLKEQELLQPGILGDDEEEEEEEEEVEEDLETDGHCAERDSLLSTSSLASHDSTLS
Sbjct: 301 LQEILLKEQELLQPGILGDDEEEEEEEEEVEEDLETDGHCAERDSLLSTSSLASHDSTLS 360
Query: 361 LASSQASGPALSRHLLTSFVSGLSDGMDSGYVEDSEESSSEWPWRRGSQERRGHRRPGQK 420
LASSQASGPALSRHLLTSFVSGLSDGMDSGYVEDSEESSSEWPWRRGSQERRGHRRPGQK
Sbjct: 361 LASSQASGPALSRHLLTSFVSGLSDGMDSGYVEDSEESSSEWPWRRGSQERRGHRRPGQK 420
Query: 421 FIRIYKLFKSTSQLVLRRDSRSLEGSSDTALPLRRAGSLCSPLDEPVSPPSRAQRSRSLP 480
FIRIYKLFKSTSQLVLRRDSRSLEGSSDTALPLRRAGSLCSPLDEPVSPPSRAQRSRSLP
Sbjct: 421 FIRIYKLFKSTSQLVLRRDSRSLEGSSDTALPLRRAGSLCSPLDEPVSPPSRAQRSRSLP 480
Query: 481 QPKLGTQLPSWLLAPASRPQRRRPFLSGDEDPKASTLRVVVFGSDRISGKVARAYSNLRR 540
QPKLGTQLPSWLLAPASRPQRRRPFLSGDEDPKASTLRVVVFGSDRISGKVARAYSNLRR
Sbjct: 481 QPKLGTQLPSWLLAPASRPQRRRPFLSGDEDPKASTLRVVVFGSDRISGKVARAYSNLRR 540
Query: 541 LENNRPLLTRFFKLQFFYVPVKRSHGTSPGACPPPRSQTPSPPTDSPRHASPGELGTTPW 600
LENNRPLLTRFFKLQFFYVPVKRSHGTSPGACPPPRSQTPSPPTDSPRHASPGELGTTPW
Sbjct: 541 LENNRPLLTRFFKLQFFYVPVKRSHGTSPGACPPPRSQTPSPPTDSPRHASPGELGTTPW 600
Query: 601 EESTNDISHYLGMLDPWYERNVLGLMHLPPEVLCQQSLKAEAQALEGSPTQLPILADMLL 660
EESTNDISHYLGMLDPWYERNVLGLMHLPPEVLCQQSLKAEAQALEGSPTQLPILADMLL
Sbjct: 601 EESTNDISHYLGMLDPWYERNVLGLMHLPPEVLCQQSLKAEAQALEGSPTQLPILADMLL 660
Query: 661 YYCRFAARPVLLQVYQTELTFITGEKTTEIFIHSLELGHSAATRAIKASGPGSKRLGIDG 720
YYCRFAARPVLLQVYQTELTFITGEKTTEIFIHSLELGHSAATRAIKASGPGSKRLGIDG
Sbjct: 661 YYCRFAARPVLLQVYQTELTFITGEKTTEIFIHSLELGHSAATRAIKASGPGSKRLGIDG 720
Query: 721 DREAVPLTLQIIYSKGAISGRSRWSNLEKVCTSVNLNKACRKQEELDSSMEALTLNLTEV 780
DREAVPLTLQIIYSKGAISGRSRWSNLEKVCTSVNLNKACRKQEELDSSMEALTLNLTEV
Sbjct: 721 DREAVPLTLQIIYSKGAISGRSRWSNLEKVCTSVNLNKACRKQEELDSSMEALTLNLTEV 780
Query: 781 VKRQNSKSKKGFNQISTSQIKVDKVQIIGSNSCPFAVCLDQDERKILQSVVRCEVSPCYK 840
VKRQNSKSKKGFNQISTSQIKVDKVQIIGSNSCPFAVCLDQDERKILQSVVRCEVSPCYK
Sbjct: 781 VKRQNSKSKKGFNQISTSQIKVDKVQIIGSNSCPFAVCLDQDERKILQSVVRCEVSPCYK 840
Query: 841 PEKSDLSSPPQTPPDLPAQAAPDLCSLLCLPIMTFSGALP 880
PEKSDLSSPPQTPPDLPAQAAPDLCSLLCLPIMTFSGALP
Sbjct: 841 PEKSDLSSPPQTPPDLPAQAAPDLCSLLCLPIMTFSGALP 880
>gi|217330622 phosphoinositide-3-kinase, regulatory subunit 5 [Homo
sapiens]
Length = 880
Score = 1767 bits (4577), Expect = 0.0
Identities = 880/880 (100%), Positives = 880/880 (100%)
Query: 1 MQPGATTCTEDRIQHALERCLHGLSLSRRSTSWSAGLCLNCWSLQELVSRDPGHFLILLE 60
MQPGATTCTEDRIQHALERCLHGLSLSRRSTSWSAGLCLNCWSLQELVSRDPGHFLILLE
Sbjct: 1 MQPGATTCTEDRIQHALERCLHGLSLSRRSTSWSAGLCLNCWSLQELVSRDPGHFLILLE 60
Query: 61 QILQKTREVQEKGTYDLLTPLALLFYSTVLCTPHFPPDSDLLLKAASTYHRFLTWPVPYC 120
QILQKTREVQEKGTYDLLTPLALLFYSTVLCTPHFPPDSDLLLKAASTYHRFLTWPVPYC
Sbjct: 61 QILQKTREVQEKGTYDLLTPLALLFYSTVLCTPHFPPDSDLLLKAASTYHRFLTWPVPYC 120
Query: 121 SICQELLTFIDAELKAPGISYQRLVRAEQGLPIRSHRSSTVTVLLLNPVEVQAEFLAVAN 180
SICQELLTFIDAELKAPGISYQRLVRAEQGLPIRSHRSSTVTVLLLNPVEVQAEFLAVAN
Sbjct: 121 SICQELLTFIDAELKAPGISYQRLVRAEQGLPIRSHRSSTVTVLLLNPVEVQAEFLAVAN 180
Query: 181 KLSTPGHSPHSAYTTLLLHAFQATFGAHCDVPGLHCRLQAKTLAELEDIFTETAEAQELA 240
KLSTPGHSPHSAYTTLLLHAFQATFGAHCDVPGLHCRLQAKTLAELEDIFTETAEAQELA
Sbjct: 181 KLSTPGHSPHSAYTTLLLHAFQATFGAHCDVPGLHCRLQAKTLAELEDIFTETAEAQELA 240
Query: 241 SGIGDAAEARRWLRTKLQAVGEKAGFPGVLDTAKPGKLHTIPIPVARCYTYSWSQDSFDI 300
SGIGDAAEARRWLRTKLQAVGEKAGFPGVLDTAKPGKLHTIPIPVARCYTYSWSQDSFDI
Sbjct: 241 SGIGDAAEARRWLRTKLQAVGEKAGFPGVLDTAKPGKLHTIPIPVARCYTYSWSQDSFDI 300
Query: 301 LQEILLKEQELLQPGILGDDEEEEEEEEEVEEDLETDGHCAERDSLLSTSSLASHDSTLS 360
LQEILLKEQELLQPGILGDDEEEEEEEEEVEEDLETDGHCAERDSLLSTSSLASHDSTLS
Sbjct: 301 LQEILLKEQELLQPGILGDDEEEEEEEEEVEEDLETDGHCAERDSLLSTSSLASHDSTLS 360
Query: 361 LASSQASGPALSRHLLTSFVSGLSDGMDSGYVEDSEESSSEWPWRRGSQERRGHRRPGQK 420
LASSQASGPALSRHLLTSFVSGLSDGMDSGYVEDSEESSSEWPWRRGSQERRGHRRPGQK
Sbjct: 361 LASSQASGPALSRHLLTSFVSGLSDGMDSGYVEDSEESSSEWPWRRGSQERRGHRRPGQK 420
Query: 421 FIRIYKLFKSTSQLVLRRDSRSLEGSSDTALPLRRAGSLCSPLDEPVSPPSRAQRSRSLP 480
FIRIYKLFKSTSQLVLRRDSRSLEGSSDTALPLRRAGSLCSPLDEPVSPPSRAQRSRSLP
Sbjct: 421 FIRIYKLFKSTSQLVLRRDSRSLEGSSDTALPLRRAGSLCSPLDEPVSPPSRAQRSRSLP 480
Query: 481 QPKLGTQLPSWLLAPASRPQRRRPFLSGDEDPKASTLRVVVFGSDRISGKVARAYSNLRR 540
QPKLGTQLPSWLLAPASRPQRRRPFLSGDEDPKASTLRVVVFGSDRISGKVARAYSNLRR
Sbjct: 481 QPKLGTQLPSWLLAPASRPQRRRPFLSGDEDPKASTLRVVVFGSDRISGKVARAYSNLRR 540
Query: 541 LENNRPLLTRFFKLQFFYVPVKRSHGTSPGACPPPRSQTPSPPTDSPRHASPGELGTTPW 600
LENNRPLLTRFFKLQFFYVPVKRSHGTSPGACPPPRSQTPSPPTDSPRHASPGELGTTPW
Sbjct: 541 LENNRPLLTRFFKLQFFYVPVKRSHGTSPGACPPPRSQTPSPPTDSPRHASPGELGTTPW 600
Query: 601 EESTNDISHYLGMLDPWYERNVLGLMHLPPEVLCQQSLKAEAQALEGSPTQLPILADMLL 660
EESTNDISHYLGMLDPWYERNVLGLMHLPPEVLCQQSLKAEAQALEGSPTQLPILADMLL
Sbjct: 601 EESTNDISHYLGMLDPWYERNVLGLMHLPPEVLCQQSLKAEAQALEGSPTQLPILADMLL 660
Query: 661 YYCRFAARPVLLQVYQTELTFITGEKTTEIFIHSLELGHSAATRAIKASGPGSKRLGIDG 720
YYCRFAARPVLLQVYQTELTFITGEKTTEIFIHSLELGHSAATRAIKASGPGSKRLGIDG
Sbjct: 661 YYCRFAARPVLLQVYQTELTFITGEKTTEIFIHSLELGHSAATRAIKASGPGSKRLGIDG 720
Query: 721 DREAVPLTLQIIYSKGAISGRSRWSNLEKVCTSVNLNKACRKQEELDSSMEALTLNLTEV 780
DREAVPLTLQIIYSKGAISGRSRWSNLEKVCTSVNLNKACRKQEELDSSMEALTLNLTEV
Sbjct: 721 DREAVPLTLQIIYSKGAISGRSRWSNLEKVCTSVNLNKACRKQEELDSSMEALTLNLTEV 780
Query: 781 VKRQNSKSKKGFNQISTSQIKVDKVQIIGSNSCPFAVCLDQDERKILQSVVRCEVSPCYK 840
VKRQNSKSKKGFNQISTSQIKVDKVQIIGSNSCPFAVCLDQDERKILQSVVRCEVSPCYK
Sbjct: 781 VKRQNSKSKKGFNQISTSQIKVDKVQIIGSNSCPFAVCLDQDERKILQSVVRCEVSPCYK 840
Query: 841 PEKSDLSSPPQTPPDLPAQAAPDLCSLLCLPIMTFSGALP 880
PEKSDLSSPPQTPPDLPAQAAPDLCSLLCLPIMTFSGALP
Sbjct: 841 PEKSDLSSPPQTPPDLPAQAAPDLCSLLCLPIMTFSGALP 880
>gi|58082081 phosphoinositide-3-kinase, regulatory subunit 6 [Homo
sapiens]
Length = 754
Score = 119 bits (298), Expect = 1e-26
Identities = 115/415 (27%), Positives = 174/415 (41%), Gaps = 76/415 (18%)
Query: 490 SWLLAPASRPQRRRPFLSGDEDPKAS---TLRVVVFGSDRISGKVARAYSNLRRLENNRP 546
SW P + RP G+ P S T RV+V G DR+ G++A+AY LR+ E +
Sbjct: 386 SWDGPPGLHRRTGRPSGDGEMLPGVSRLHTARVLVLGDDRMLGRLAQAYHRLRKRETQKF 445
Query: 547 LLTRFFKLQFFYVPVKRSHGTSPGACPPPRSQTPSPPTDSPRHASPGELGTTPWEESTND 606
LT LQ +Y+PV P P S R GEL T
Sbjct: 446 CLTPRLSLQLYYIPV----------------LAPEKPAAS-RQPELGELAT--------- 479
Query: 607 ISHYLGMLDPWYERNVLGLMHLPPEVLCQ--QSLKAEAQALEGSPTQLPILADMLLYYCR 664
+LG +DPWY+ NV LC L +L+ S T P + D++ YY R
Sbjct: 480 ---FLGRVDPWYQSNV--------NTLCPAIHKLAEMPPSLDTSRTVDPFILDVITYYIR 528
Query: 665 FAARPVLLQVYQTELTF--ITGEKTTEIFIHSLELGHSAATRAIKASGPGSKRLGIDGDR 722
+P+ Q+Y ++ F ++ + T +IF+ +EL G +R G+
Sbjct: 529 MGTQPIYFQIYTVKIFFSDLSQDPTEDIFL--IELKVKIQDSKFPKDGFSPRRRGV---A 583
Query: 723 EAVPLTLQIIYSKGAISGRSRWSNLEKVCTSVNLNKACRKQEELDSSME----------- 771
E L + Y K +S R R + T + L E+ S
Sbjct: 584 EGPGAELSLCYQKALLSHRPREVTVSLRATGLILKAIPASDTEVSGSSHCPLPAAPVTDH 643
Query: 772 -ALTLNLTEVVKRQNSKSKKGFNQISTSQIKVDKVQIIGSNSCPFAVCLDQDERKILQSV 830
L +N+TEVVK N + K F+ + T+ + + +QI + + LD+D+++ + V
Sbjct: 644 TCLNVNVTEVVKSSN-LAGKSFSTV-TNTFRTNNIQIQSRDQRLLTLSLDKDDQRTFRDV 701
Query: 831 VRCEVSPCYKP-EKSDLSSPP-------QTPPDLPAQAAPDLCSLLCLPIMTFSG 877
VR EV+PC +P + S P Q + A+ P L +PI TFSG
Sbjct: 702 VRFEVAPCPEPCSGAQKSKAPWLNLHGQQEVEAIKAKPKP-----LLMPINTFSG 751
Score = 78.6 bits (192), Expect = 2e-14
Identities = 60/229 (26%), Positives = 99/229 (43%), Gaps = 7/229 (3%)
Query: 13 IQHALERCLHGLSLSRRSTSWSAGLCLNCWSLQELVSRDPGHFLILLEQILQKTREVQEK 72
+Q +++ L LS + + G+ WSL + V RDPG +L+ +L++ + + +
Sbjct: 10 LQRSVQAVLRELSTQAPALQSNQGMWR--WSLHKKVERDPGKSPVLVRILLRELEKAESQ 67
Query: 73 GTYDLLTPLALLFYSTVLCTPHFPPDSDLLLKAASTYHRFLTWPVPYCSICQELLTFIDA 132
++ PL L + T +L + + R LT P PYC++ + +
Sbjct: 68 DLRHVIIPL--LHTVMYVLTKATGITEELYQRIYAFCTRLLTLPTPYCTVALDCAIRLKT 125
Query: 133 ELKAPGISYQRLVRAEQGLPIRSHRSSTVTVLLLNPVEVQAEF---LAVANKLSTPGHSP 189
E+ PG YQR+V AEQ L + L ++P V A L + + + +P
Sbjct: 126 EMAVPGTLYQRMVIAEQNLTNELYPYQERVFLFVDPELVSASVCSALLLEIEAAQAQQTP 185
Query: 190 HSAYTTLLLHAFQATFGAHCDVPGLHCRLQAKTLAELEDIFTETAEAQE 238
+ ++ HA QA G C LH +LQA LE F A E
Sbjct: 186 ETCMRHVVSHALQAALGEACHAGALHRKLQASPRRTLEHYFHAVVAALE 234
>gi|29789058 WW and C2 domain containing 1 isoform 3 [Homo sapiens]
Length = 1113
Score = 41.2 bits (95), Expect = 0.004
Identities = 52/202 (25%), Positives = 78/202 (38%), Gaps = 30/202 (14%)
Query: 309 QELLQPGILGDDEEEEEEEEEVEEDLET-------DGHCAER-DSLLSTSSLASHDSTLS 360
+E + + ++EEEE EEEE EED+ T DG+ A + D +T + A + +
Sbjct: 845 EETSENEAVAEEEEEEVEEEEGEEDVFTEKASPDMDGYPALKVDKETNTETPAPSPTVVR 904
Query: 361 LASSQASGPALSRHLLTSFV---SGLSDGMDSGYV-------EDSEESSSEWPWRRGSQE 410
+ P+ L S + S G S YV DS S + P+ R S E
Sbjct: 905 PKDRRVGTPSQGPFLRGSTIIRSKTFSPGPQSQYVCRLNRSDSDSSTLSKKPPFVRNSLE 964
Query: 411 RRGHRRPGQKFIRIYKLFKSTSQLVLRRDSRSLEGSSDTALPLRRAGSLCSPLDEPVSPP 470
RR R K S + R R + S D L L+ + S L + +S
Sbjct: 965 RRSVR------------MKRPSSVKSLRSERLIRTSLDLELDLQATRTWHSQLTQEISVL 1012
Query: 471 SRAQRSRSLPQPKLGTQLPSWL 492
+ + +LP WL
Sbjct: 1013 KELKEQLEQAKSHGEKELPQWL 1034
>gi|242247257 WW and C2 domain containing 1 isoform 2 [Homo sapiens]
Length = 1118
Score = 39.7 bits (91), Expect = 0.012
Identities = 53/204 (25%), Positives = 79/204 (38%), Gaps = 28/204 (13%)
Query: 309 QELLQPGILGDDEEEEEEEEEVEEDLET-------DGHCAER-DSLLSTSSLASHDSTLS 360
+E + + ++EEEE EEEE EED+ T DG+ A + D +T + A + +
Sbjct: 845 EETSENEAVAEEEEEEVEEEEGEEDVFTEKASPDMDGYPALKVDKETNTETPAPSPTVVR 904
Query: 361 LASSQASGPALSRHLLTSFV---SGLSDGMDSGYV-------EDSEESSSEWPWRRGSQE 410
+ P+ L S + S G S YV DS S + P+ R S E
Sbjct: 905 PKDRRVGTPSQGPFLRGSTIIRSKTFSPGPQSQYVCRLNRSDSDSSTLSKKPPFVRNSLE 964
Query: 411 RRGHR--RPGQKFIRIYKLFKSTSQLVLRRDSRSLEGSSDTALPLRRAGSLCSPLDEPVS 468
RR R RP S + R R + S D L L+ + S L + +S
Sbjct: 965 RRSVRMKRPSPP--------PQPSSVKSLRSERLIRTSLDLELDLQATRTWHSQLTQEIS 1016
Query: 469 PPSRAQRSRSLPQPKLGTQLPSWL 492
+ + +LP WL
Sbjct: 1017 VLKELKEQLEQAKSHGEKELPQWL 1040
>gi|242247251 WW and C2 domain containing 1 isoform 1 [Homo sapiens]
Length = 1119
Score = 39.7 bits (91), Expect = 0.012
Identities = 53/204 (25%), Positives = 79/204 (38%), Gaps = 28/204 (13%)
Query: 309 QELLQPGILGDDEEEEEEEEEVEEDLET-------DGHCAER-DSLLSTSSLASHDSTLS 360
+E + + ++EEEE EEEE EED+ T DG+ A + D +T + A + +
Sbjct: 845 EETSENEAVAEEEEEEVEEEEGEEDVFTEKASPDMDGYPALKVDKETNTETPAPSPTVVR 904
Query: 361 LASSQASGPALSRHLLTSFV---SGLSDGMDSGYV-------EDSEESSSEWPWRRGSQE 410
+ P+ L S + S G S YV DS S + P+ R S E
Sbjct: 905 PKDRRVGTPSQGPFLRGSTIIRSKTFSPGPQSQYVCRLNRSDSDSSTLSKKPPFVRNSLE 964
Query: 411 RRGHR--RPGQKFIRIYKLFKSTSQLVLRRDSRSLEGSSDTALPLRRAGSLCSPLDEPVS 468
RR R RP S + R R + S D L L+ + S L + +S
Sbjct: 965 RRSVRMKRPSPP--------PQPSSVKSLRSERLIRTSLDLELDLQATRTWHSQLTQEIS 1016
Query: 469 PPSRAQRSRSLPQPKLGTQLPSWL 492
+ + +LP WL
Sbjct: 1017 VLKELKEQLEQAKSHGEKELPQWL 1040
>gi|55741677 SET domain containing 1A [Homo sapiens]
Length = 1707
Score = 39.3 bits (90), Expect = 0.016
Identities = 52/199 (26%), Positives = 75/199 (37%), Gaps = 42/199 (21%)
Query: 319 DDEEEEEEEEEVEEDLET--------DGHCAERDSLLSTSSLAS----HDSTLSLASSQA 366
+D+EE+EE+E+ EE ++T DG E DS S A +DST SS +
Sbjct: 979 EDDEEDEEDEDREEAVDTTKKETEVSDGEDEESDSSSKCSLYADSDGENDSTSDSESSSS 1038
Query: 367 SGPALSRHLLTSFVSGLSDGMDSGYVEDSEESSSEWPWRRGSQERRGHRRPGQKFIRIYK 426
S + S +S S S S E+ EE + P P + + +
Sbjct: 1039 SSSSSSSSSSSSSSSSSSSSESSSEDEEEEERPAALP----------SASPPPREVPV-- 1086
Query: 427 LFKSTSQLVLRRDSRSLEGSSDTALPLRRAGSLCSPLDEPVSPPSR--AQRSRSLPQ-PK 483
+ +P R AGS +PL E + P+R S P P
Sbjct: 1087 ---------------PTPAPVEVPVPERVAGSPVTPLPEQEASPARPAGPTEESPPSAPL 1131
Query: 484 LGTQLPSWLLAPASRPQRR 502
+ P+ APA RP R
Sbjct: 1132 RPPEPPAGPPAPAPRPDER 1150
Score = 30.8 bits (68), Expect = 5.8
Identities = 19/49 (38%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Query: 307 KEQELLQPGILGDDEEEEEEEEEVEEDLETDGHCAERDSLLSTSSLASH 355
K Q+L Q G++E EEE EEE EE ++ ++ + L SL SH
Sbjct: 1350 KPQQLQQQREEGEEEGEEEGEEEEEESSDSSS-SSDGEGALRRRSLRSH 1397
>gi|226509740 SR-related CTD-associated factor 1 [Homo sapiens]
Length = 1312
Score = 38.9 bits (89), Expect = 0.021
Identities = 39/147 (26%), Positives = 64/147 (43%), Gaps = 13/147 (8%)
Query: 231 TETAEAQELASGIGDAAEARRWLRTKLQAVGEKAGFPGVLDTAKPG-----KLHTIPIPV 285
++T + G G + ++K + + AG G +T+ G K+ + P P
Sbjct: 921 SKTRKKVRSGGGSGGSGGQVSLKKSKADSCSQAAGTKGAEETSWSGEERAAKVPSTPPPK 980
Query: 286 ARCYTYSWSQDSFDILQEI------LLKEQELLQPGILGDDEEEEEEEEEVEEDLETDGH 339
A + + DS + L E+ + G+ G EEEEEEEEE EE+ E +
Sbjct: 981 AAPPPPALTPDSQTVDSSCKTPEVSFLPEEATEEAGVRGGAEEEEEEEEEEEEEEEEEEQ 1040
Query: 340 CAERDSLLSTSSLASHDSTLSLASSQA 366
+ + +TS+ A+ ST A S A
Sbjct: 1041 --QPATTTATSTAAAAPSTAPSAGSTA 1065
Score = 32.0 bits (71), Expect = 2.6
Identities = 16/38 (42%), Positives = 24/38 (63%)
Query: 319 DDEEEEEEEEEVEEDLETDGHCAERDSLLSTSSLASHD 356
++EEEEEEEEE EED E + ++ S +S + +D
Sbjct: 269 EEEEEEEEEEEEEEDEEEEEGLSQSISRISETLAGIYD 306
Score = 30.8 bits (68), Expect = 5.8
Identities = 16/42 (38%), Positives = 25/42 (59%)
Query: 319 DDEEEEEEEEEVEEDLETDGHCAERDSLLSTSSLASHDSTLS 360
++EEEEEEEEE E++ E +G + T + D++LS
Sbjct: 270 EEEEEEEEEEEEEDEEEEEGLSQSISRISETLAGIYDDNSLS 311
>gi|23397642 GREB1 protein isoform a [Homo sapiens]
Length = 1949
Score = 37.7 bits (86), Expect = 0.047
Identities = 21/55 (38%), Positives = 30/55 (54%)
Query: 317 LGDDEEEEEEEEEVEEDLETDGHCAERDSLLSTSSLASHDSTLSLASSQASGPAL 371
L D E+ + +E+L T+G +E+ S + SHDS S SS+ASG AL
Sbjct: 1087 LESDAEKLSSTDNEDEELGTEGSTSEKRSPMKRERSRSHDSASSSLSSKASGSAL 1141
>gi|23065526 growth arrest-specific 2 like 1 isoform a [Homo
sapiens]
Length = 681
Score = 37.4 bits (85), Expect = 0.062
Identities = 56/217 (25%), Positives = 85/217 (39%), Gaps = 27/217 (12%)
Query: 440 SRSLEGSSDTALPLRRAGSLCSPLDEPVSPPSRAQRSRSLPQ--PKLGTQLPSWLLAPAS 497
SR G SD++ ++G L + D+ + P R + SR L P + P+
Sbjct: 348 SRRYSGDSDSSASSAQSGPLGTRSDDTGTGPRRERPSRRLTTGTPASPRRPPALRSQSRD 407
Query: 498 RPQRRRPFLSGDEDPKASTLRVVVFGSDRISGKVARAYSNLRRLENNRPLLTRFFKLQFF 557
R R RP G + + L V AR + R E L+ R Q
Sbjct: 408 RLDRGRP--RGAPGGRGAQLSVP---------SPARRARSQSREEQAVLLVRRDRDGQHS 456
Query: 558 YVPVKRSHGTSPGACPP-PRSQTPSPPTDSPRHASPGELGTTPWEESTNDISHYLGMLDP 616
+VP R G S + P PR+++P+ P S + ELGTTP + LDP
Sbjct: 457 WVPRGRGSGGSGRSTPQTPRARSPAAPRLSRVSSPSPELGTTPASIFRTPL-----QLDP 511
Query: 617 WYERNVLGLMHLPPEVLCQQSLKAEAQALEGSPTQLP 653
E+ + + ++ A A+ALE + P
Sbjct: 512 QQEQQLFRRL--------EEEFLANARALEAVASVTP 540
>gi|19923777 growth arrest-specific 2 like 1 isoform a [Homo
sapiens]
Length = 681
Score = 37.4 bits (85), Expect = 0.062
Identities = 56/217 (25%), Positives = 85/217 (39%), Gaps = 27/217 (12%)
Query: 440 SRSLEGSSDTALPLRRAGSLCSPLDEPVSPPSRAQRSRSLPQ--PKLGTQLPSWLLAPAS 497
SR G SD++ ++G L + D+ + P R + SR L P + P+
Sbjct: 348 SRRYSGDSDSSASSAQSGPLGTRSDDTGTGPRRERPSRRLTTGTPASPRRPPALRSQSRD 407
Query: 498 RPQRRRPFLSGDEDPKASTLRVVVFGSDRISGKVARAYSNLRRLENNRPLLTRFFKLQFF 557
R R RP G + + L V AR + R E L+ R Q
Sbjct: 408 RLDRGRP--RGAPGGRGAQLSVP---------SPARRARSQSREEQAVLLVRRDRDGQHS 456
Query: 558 YVPVKRSHGTSPGACPP-PRSQTPSPPTDSPRHASPGELGTTPWEESTNDISHYLGMLDP 616
+VP R G S + P PR+++P+ P S + ELGTTP + LDP
Sbjct: 457 WVPRGRGSGGSGRSTPQTPRARSPAAPRLSRVSSPSPELGTTPASIFRTPL-----QLDP 511
Query: 617 WYERNVLGLMHLPPEVLCQQSLKAEAQALEGSPTQLP 653
E+ + + ++ A A+ALE + P
Sbjct: 512 QQEQQLFRRL--------EEEFLANARALEAVASVTP 540
>gi|166795264 AE binding protein 2 isoform b [Homo sapiens]
Length = 517
Score = 37.4 bits (85), Expect = 0.062
Identities = 37/124 (29%), Positives = 52/124 (41%), Gaps = 19/124 (15%)
Query: 313 QPGILGDDEEEEEEEEEVEEDLETDGHCAERDSLLSTSSLASHDSTLSL---ASSQASGP 369
Q G D+EE++EEEE+ + +SL+ +S +S D T SL A+S +SG
Sbjct: 92 QAGEDEDEEEDDEEEEDESSSSGGGEEESSAESLVGSSGGSSSDETRSLSPGAASSSSGD 151
Query: 370 ALSRHLL----------------TSFVSGLSDGMDSGYVEDSEESSSEWPWRRGSQERRG 413
+ L +S S +S G D GY SS+ RRGS E
Sbjct: 152 GDGKEGLEEPKGPRGSQGGGGGGSSSSSVVSSGGDEGYGTGGGGSSATSGGRRGSLEMSS 211
Query: 414 HRRP 417
P
Sbjct: 212 DGEP 215
>gi|166795262 AE binding protein 2 isoform a [Homo sapiens]
Length = 503
Score = 37.4 bits (85), Expect = 0.062
Identities = 37/124 (29%), Positives = 52/124 (41%), Gaps = 19/124 (15%)
Query: 313 QPGILGDDEEEEEEEEEVEEDLETDGHCAERDSLLSTSSLASHDSTLSL---ASSQASGP 369
Q G D+EE++EEEE+ + +SL+ +S +S D T SL A+S +SG
Sbjct: 92 QAGEDEDEEEDDEEEEDESSSSGGGEEESSAESLVGSSGGSSSDETRSLSPGAASSSSGD 151
Query: 370 ALSRHLL----------------TSFVSGLSDGMDSGYVEDSEESSSEWPWRRGSQERRG 413
+ L +S S +S G D GY SS+ RRGS E
Sbjct: 152 GDGKEGLEEPKGPRGSQGGGGGGSSSSSVVSSGGDEGYGTGGGGSSATSGGRRGSLEMSS 211
Query: 414 HRRP 417
P
Sbjct: 212 DGEP 215
>gi|54859722 nucleoporin 160kDa [Homo sapiens]
Length = 1436
Score = 37.0 bits (84), Expect = 0.081
Identities = 17/59 (28%), Positives = 32/59 (54%)
Query: 760 CRKQEELDSSMEALTLNLTEVVKRQNSKSKKGFNQISTSQIKVDKVQIIGSNSCPFAVC 818
C K +E+ + + A+ L + E+ + +KGFN I+++ Q+ GSN+ + VC
Sbjct: 659 CSKLQEIRNPIHAIGLLIREMDYETEVEMEKGFNPAQPLNIRMNLTQLYGSNTAGYIVC 717
>gi|115511012 coiled-coil domain containing 136 [Homo sapiens]
Length = 1154
Score = 37.0 bits (84), Expect = 0.081
Identities = 17/28 (60%), Positives = 22/28 (78%)
Query: 308 EQELLQPGILGDDEEEEEEEEEVEEDLE 335
E E+L P + ++EEEEEEEEEVEE+ E
Sbjct: 5 EGEVLLPALYEEEEEEEEEEEEVEEEEE 32
Score = 30.4 bits (67), Expect = 7.5
Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 5/51 (9%)
Query: 319 DDEEEEEEEEEVEEDLETDGHCAERDSLLSTSSLASHDSTLSLASSQASGP 369
++ EE++EEEE EED E E D S+ ++ L L+ S+ S P
Sbjct: 1079 EENEEDKEEEEKEEDSE-----EEEDDADSSLESPEENNPLRLSESKKSSP 1124
>gi|168823443 RAD54-like 2 [Homo sapiens]
Length = 1467
Score = 36.6 bits (83), Expect = 0.11
Identities = 58/217 (26%), Positives = 87/217 (40%), Gaps = 27/217 (12%)
Query: 312 LQPGILGDDEEEEEEEEEVE-EDLETDGHCAERDSLLSTSSLASHDSTLSLASSQASGPA 370
L P + +D EEEEEEEEV E+ + D + + LL SL + +Q
Sbjct: 13 LDPDVELEDAEEEEEEEEVAVEECDRD----DEEDLLDDPSL---EGMCGTEHAQLGEDG 65
Query: 371 LSRHLLTSFVSGLSDGMDSGYVEDSEESSSEWPWRRGSQERRGHRRPGQKFIR---IYKL 427
TS S S+ + + +SE P ++ +Q+ RR +K +R + +
Sbjct: 66 QQPPRCTSTTSSQSEPSEQLRRHQGKNLASEDPKKKRAQKPSHMRRNIRKLLREDQLEPV 125
Query: 428 FKSTSQLVLRRDSRSLEGSSDTALPLRRAGSLCSPLDEPVSPPSRAQRSRSLPQPKLGTQ 487
K+ Q L R R + D A P+ PL+ P A R+ G Q
Sbjct: 126 TKAAQQEELERRKRLEQQRKDYAAPIPTV-----PLE--FLPEEIALRASD------GPQ 172
Query: 488 LPSWLLAPASRPQRRRPFLSGDEDPKASTLRVVVFGS 524
LP +LA + SG ED K+S V+ S
Sbjct: 173 LPPRVLA---QEVICLDSSSGSEDEKSSRDEVIELSS 206
>gi|40254891 hypothetical protein FLJ20674 [Homo sapiens]
Length = 540
Score = 36.2 bits (82), Expect = 0.14
Identities = 29/89 (32%), Positives = 41/89 (46%), Gaps = 21/89 (23%)
Query: 316 ILGDDEEEEEEEEEVEEDL---ETDGHCAERDSLLSTSSLASHDSTLSLASSQASGPALS 372
+L D EEEEEEEEE EED E +G ER+ L H
Sbjct: 458 VLVDSEEEEEEEEEEEEDAAVGEQEG-AREREELPKEIPKQDH----------------- 499
Query: 373 RHLLTSFVSGLSDGMDSGYVEDSEESSSE 401
H +T+ V+G + M +G+ + ++SS E
Sbjct: 500 IHRVTALVNGNIEQMGNGFQDLQDDSSEE 528
>gi|119709834 castor homolog 1, zinc finger isoform a [Homo sapiens]
Length = 1759
Score = 36.2 bits (82), Expect = 0.14
Identities = 33/116 (28%), Positives = 53/116 (45%), Gaps = 9/116 (7%)
Query: 259 AVGEKAGFPGVLDTAKPGKLHTIPIPVARCYTYSWSQDSFDILQEILLKEQELLQPGILG 318
A+G+ AG PG D A PG A S + +E+ L E+E
Sbjct: 1642 ALGD-AGDPGPPDAAAPGPREGAAAAAAAAGESSQEDEE----EELELPEEEAEDDEDED 1696
Query: 319 DDEE---EEEEEEEVEEDLETDGHCAERDSLLSTSSLASHDSTL-SLASSQASGPA 370
DDE+ E+++E++ +EDL TD + ++ + + L +LA+ A GPA
Sbjct: 1697 DDEDDDDEDDDEDDDDEDLRTDSEESLPEAAAEAAGAGARTPALAALAALGAPGPA 1752
>gi|42741684 zinc finger protein 265 isoform 1 [Homo sapiens]
Length = 330
Score = 36.2 bits (82), Expect = 0.14
Identities = 54/196 (27%), Positives = 75/196 (38%), Gaps = 33/196 (16%)
Query: 319 DDEEEEEEEEEVEEDL---ETDGHCAERDSLLSTSSL---ASHDSTLSLASSQASGPALS 372
+D+E E EEE+ +EDL + D E D+ LS +L DS ++ ++ + S
Sbjct: 149 EDKESEGEEEDEDEDLSKYKLDEDEDEDDADLSKYNLDASEEEDSNKKKSNRRSRSKSRS 208
Query: 373 RHLLTSFVSGLSDGMDSGYVEDSEESSSEWPWRRGSQERRGHRRPGQKFIRIYKLFKSTS 432
H +S S S S SSS R S R R +
Sbjct: 209 SHSRSSSRSSSPSSSRSRSRSRSRSSSSSQSRSRSSSRERSRSRGSKS------------ 256
Query: 433 QLVLRRDSRSLEGSSDTALPLRRAGSLCSPLDEPVSPPSRAQRSRSLPQPKLGTQLPSWL 492
R SRS GSS P +R+ S S E SR++ S S + K T+ S
Sbjct: 257 ----RSSSRSHRGSSS---PRKRSYSSSSSSPERNRKRSRSRSSSSGDRKKRRTRSRS-- 307
Query: 493 LAPASRPQRRRPFLSG 508
P+RR SG
Sbjct: 308 ------PERRHRSSSG 317
>gi|210032580 SET domain containing 1B [Homo sapiens]
Length = 1923
Score = 36.2 bits (82), Expect = 0.14
Identities = 34/95 (35%), Positives = 43/95 (45%), Gaps = 6/95 (6%)
Query: 308 EQELLQPGILGDDEEEEEEEEEVEEDLETDGHCAERDSLLSTSSLASHDSTLSLASSQAS 367
E+E L +EEEE EEEE EED + D +RD S D+ LS AS +
Sbjct: 1037 EKESLSEEQESTEEEEEAEEEEEEED-DDDDDSDDRDE----SENDDEDTALSEASEKDE 1091
Query: 368 GPALSRHLLTSFVSGLSDGMDSGYVEDSE-ESSSE 401
G + ++ S S E SE ESSSE
Sbjct: 1092 GDSDEEETVSIVTSKAEATSSSESSESSEFESSSE 1126
Score = 36.2 bits (82), Expect = 0.14
Identities = 27/101 (26%), Positives = 50/101 (49%), Gaps = 6/101 (5%)
Query: 302 QEILLKEQELLQPGILGDDEEEEEEEEEVEEDLETDGHCAERDSLLSTSSL-----ASHD 356
+E L +EQE + ++EEEEE++++ + D + + D+ LS +S + +
Sbjct: 1038 KESLSEEQESTEEEEEAEEEEEEEDDDDDDSDDRDESENDDEDTALSEASEKDEGDSDEE 1097
Query: 357 STLSLASSQASGPALSRHLLTSFVSGLSDGMDSGYVEDSEE 397
T+S+ +S+A + S +S S+ S ED EE
Sbjct: 1098 ETVSIVTSKAEATSSSESSESSEFESSSESSPSS-SEDEEE 1137
>gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]
Length = 2752
Score = 36.2 bits (82), Expect = 0.14
Identities = 56/223 (25%), Positives = 81/223 (36%), Gaps = 51/223 (22%)
Query: 398 SSSEWPWRRG----SQERRGHRRPGQKFIRIYKLFKSTSQLVLRRDSRSLEGSSDTA--- 450
S S P RRG S ER+ R Q+ R + + R SRSL A
Sbjct: 713 SHSRTPQRRGRSGSSSERKNKSRTSQRRSRSNSSPEMKKSRISSRRSRSLSSPRSKAKSR 772
Query: 451 LPLRRA--GSLCSPLDEPVSPPSRAQ-----------------RSRSLPQPKLGTQLPSW 491
L LRR+ GS P + +PP R++ RS S P PK ++ PS
Sbjct: 773 LSLRRSLSGSSPCPKQKSQTPPRRSRSGSSQPKAKSRTPPRRSRSSSSPPPKQKSKTPS- 831
Query: 492 LLAPASRPQRRRPFLSGDEDPKASTLRVVVFGSDRISGKVARAYSNLRRLENNRPLLTRF 551
R+ S PK + G+ G + +N + + R
Sbjct: 832 ----------RQSHSSSSPHPKVKS------GTPPRQGSITSPQANEQSVTPQRRSC--- 872
Query: 552 FKLQFFYVPVKRSHGTSPGAC---PPPRSQTPSPPTDSPRHAS 591
+ P +S S +C PPR ++ +PP SP +S
Sbjct: 873 --FESSPDPELKSRTPSRHSCSGSSPPRVKSSTPPRQSPSRSS 913
Score = 32.7 bits (73), Expect = 1.5
Identities = 53/186 (28%), Positives = 72/186 (38%), Gaps = 40/186 (21%)
Query: 429 KSTSQLVLRRDSRS---LEGSSDTALPLRRAGSLCSP--LDEPVSPPSRAQRSRSLPQPK 483
K+ ++ LR+ SRS E S + L RR+ S SP D+P + P S S P+PK
Sbjct: 1566 KAKTRTPLRQRSRSGSSPEVDSKSRLSPRRSRSGSSPEVKDKPRAAPRAQSGSDSSPEPK 1625
Query: 484 LGTQLPSWLLAPASRPQRRRPFLSG-----------------DEDPKASTLRVVVFGSDR 526
AP + P+R R S + PK+ T R S
Sbjct: 1626 AP--------APRALPRRSRSGSSSKGRGPSPEGSSSTESSPEHPPKSRTARRGSRSSP- 1676
Query: 527 ISGKVARAYSNLRRLENNRPLLTRFFKLQFFYVPVKRSHGTSPGACPPPRSQTPSPPTDS 586
K RR + P LTR +L +RS S + P RS+TP S
Sbjct: 1677 -EPKTKSRTPPRRRSSRSSPELTRKARLS------RRSRSAS--SSPETRSRTPPRHRRS 1727
Query: 587 PRHASP 592
P +SP
Sbjct: 1728 PSVSSP 1733
Score = 32.3 bits (72), Expect = 2.0
Identities = 28/87 (32%), Positives = 35/87 (40%), Gaps = 11/87 (12%)
Query: 438 RDSRSLEGSSDTALPLRRAGSLCSPL------DEPVSPPSRAQRSRSLPQPKLGTQLPSW 491
R S E + T L R G PL EPV+PPS A +R PK +LP
Sbjct: 356 RSSTGPEPPAPTPLLAERHGGSPQPLATTPLSQEPVNPPSEASPTRDRSPPKSPEKLPQS 415
Query: 492 LLAPASRPQRR-----RPFLSGDEDPK 513
+ +S P + R S E PK
Sbjct: 416 SSSESSPPSPQPTKVSRHASSSPESPK 442
Score = 30.4 bits (67), Expect = 7.5
Identities = 54/214 (25%), Positives = 87/214 (40%), Gaps = 36/214 (16%)
Query: 398 SSSEWPWRRGSQER-RGHRRPGQKFIRIYKLFKSTSQLVLRRDSRSLEGSSDTALPLRRA 456
S S P RR + R R R G+ R + +S S+ ++RR G S + P RR
Sbjct: 669 SRSRTPARRSGRSRSRTPARRGRSRSRTPRRGRSRSRSLVRR------GRSHSRTPQRRG 722
Query: 457 GSLCSPLDEPVSPPS-RAQRSRSLPQPK---LGTQLPSWLLAPASRPQRRRPFLSGDEDP 512
S S + S S R RS S P+ K + ++ L +P S+ + R
Sbjct: 723 RSGSSSERKNKSRTSQRRSRSNSSPEMKKSRISSRRSRSLSSPRSKAKSRL--------- 773
Query: 513 KASTLRVVVFGSDRISGKVARAYSNLRRLENNRPLLTRFFKLQFFYVPVKRSHGTSPGAC 572
+LR + GS + ++ R +++P P +RS +S
Sbjct: 774 ---SLRRSLSGSSPCPKQKSQTPPRRSRSGSSQPKAKS-------RTPPRRSRSSSS--- 820
Query: 573 PPPRSQTPSPPTDSPRHASPG---ELGTTPWEES 603
PPP+ ++ +P S +SP + GT P + S
Sbjct: 821 PPPKQKSKTPSRQSHSSSSPHPKVKSGTPPRQGS 854
>gi|189409130 zinc finger E-box binding homeobox 1 isoform a [Homo
sapiens]
Length = 1108
Score = 35.8 bits (81), Expect = 0.18
Identities = 24/74 (32%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 295 QDSFDILQEILLKEQELLQP-GILGDDEEEEEEEEEVEEDLETDGHCAERDSLLSTSSLA 353
++ D E L +E+E +P G ++EEEEE EEE E+ E +G A+ + L+
Sbjct: 1024 EEEEDKEMEELQEEKECEKPQGDEEEEEEEEEVEEEEVEEAENEGEEAKTEGLMKDDRAE 1083
Query: 354 SHDSTLSLASSQAS 367
S S+L ++S
Sbjct: 1084 SQASSLGQKVGESS 1097
>gi|189409128 zinc finger E-box binding homeobox 1 isoform b [Homo
sapiens]
Length = 1124
Score = 35.8 bits (81), Expect = 0.18
Identities = 24/74 (32%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 295 QDSFDILQEILLKEQELLQP-GILGDDEEEEEEEEEVEEDLETDGHCAERDSLLSTSSLA 353
++ D E L +E+E +P G ++EEEEE EEE E+ E +G A+ + L+
Sbjct: 1040 EEEEDKEMEELQEEKECEKPQGDEEEEEEEEEVEEEEVEEAENEGEEAKTEGLMKDDRAE 1099
Query: 354 SHDSTLSLASSQAS 367
S S+L ++S
Sbjct: 1100 SQASSLGQKVGESS 1113
>gi|116089335 BR serine/threonine kinase 2 [Homo sapiens]
Length = 668
Score = 35.4 bits (80), Expect = 0.23
Identities = 31/103 (30%), Positives = 43/103 (41%), Gaps = 18/103 (17%)
Query: 411 RRGHRRPGQKFIRIYKLFKSTSQLVLRRD---------SRSLEGSSDTALPLRRAGSLCS 461
R G RRP +K + + + S + RR SRS+ G+S +G S
Sbjct: 372 RHGKRRPERKSMEVLSVTDGGSPVPARRAIEMAQHGQRSRSISGAS--------SGLSTS 423
Query: 462 PLDEPVSPPSRAQRSRSLPQPKLGTQLPSWLLAPASRPQRRRP 504
PL P P + R LP PK GT + + +PA P P
Sbjct: 424 PLSSPRVTPHPSPRGSPLPTPK-GTPVHTPKESPAGTPNPTPP 465
>gi|93141033 PAX interacting protein 1 [Homo sapiens]
Length = 1069
Score = 35.4 bits (80), Expect = 0.23
Identities = 33/103 (32%), Positives = 46/103 (44%), Gaps = 12/103 (11%)
Query: 299 DILQEILLKEQELLQPGILGDDEEEEEEEEEVEEDLETDGHCAERDSLLSTSSLASHDST 358
D + E K++ P ++ +EEEEEEEEE E + E E+DS + S D
Sbjct: 168 DCVSEKTKKDEAFYHPRLIIYEEEEEEEEEEEEVENE------EQDS----QNEGSTDEK 217
Query: 359 LSLASSQASGPALSRHLLTSFVSGLSDGMDSGYVEDSEESSSE 401
S ASSQ P+ + S S +DS +SS E
Sbjct: 218 SSPASSQEGSPSGDQQF--SPKSNTEKSKGELMFDDSSDSSPE 258
>gi|17975763 myelin transcription factor 1 [Homo sapiens]
Length = 1121
Score = 35.4 bits (80), Expect = 0.23
Identities = 20/44 (45%), Positives = 25/44 (56%)
Query: 294 SQDSFDILQEILLKEQELLQPGILGDDEEEEEEEEEVEEDLETD 337
SQD E E+ Q GIL +EE+EEEEEE EE+ E +
Sbjct: 232 SQDLCPQSLEDAASEESSKQKGILSHEEEDEEEEEEEEEEEEDE 275
Score = 30.0 bits (66), Expect = 9.8
Identities = 13/19 (68%), Positives = 16/19 (84%)
Query: 319 DDEEEEEEEEEVEEDLETD 337
+DEEEEEEEEE EE+ E +
Sbjct: 273 EDEEEEEEEEEEEEEEEEE 291
Score = 30.0 bits (66), Expect = 9.8
Identities = 13/19 (68%), Positives = 16/19 (84%)
Query: 319 DDEEEEEEEEEVEEDLETD 337
D+EEEEEEEEE EE+ E +
Sbjct: 274 DEEEEEEEEEEEEEEEEEE 292
>gi|122937247 unc-13 homolog A [Homo sapiens]
Length = 1791
Score = 35.4 bits (80), Expect = 0.23
Identities = 22/56 (39%), Positives = 35/56 (62%), Gaps = 10/56 (17%)
Query: 293 WSQDSFDILQEI--LLKEQELLQPGILGDDEEEEEEEEEVEEDLETDGHCAERDSL 346
W QD ++ +++ L+E+EL + D+EE EEEEEEV +DL G A+R+ +
Sbjct: 405 WDQDEEELEEDLEDFLEEEELPE-----DEEELEEEEEEVPDDL---GSYAQREDV 452
>gi|86262149 zinc finger and BTB domain containing 7C [Homo sapiens]
Length = 619
Score = 35.0 bits (79), Expect = 0.31
Identities = 18/40 (45%), Positives = 26/40 (65%), Gaps = 1/40 (2%)
Query: 319 DDEEEEEEEEEVEEDLETDGH-CAERDSLLSTSSLASHDS 357
DDEE+EEEEEE EED + D A++++L ++ H S
Sbjct: 149 DDEEDEEEEEEEEEDDDDDTEDFADQENLPDPQDISCHQS 188
>gi|38373682 pleckstrin homology domain containing family G member 5
isoform a [Homo sapiens]
Length = 1006
Score = 35.0 bits (79), Expect = 0.31
Identities = 28/82 (34%), Positives = 40/82 (48%), Gaps = 3/82 (3%)
Query: 319 DDEEEEEEEEEVEEDLETDGHCAERDSLLSTSSLASHDSTLSLASSQASGPALSRHLLTS 378
D++EEEEEEEE EE+ E G A + S S DS +S S L+ ++
Sbjct: 709 DEQEEEEEEEEEEEEGEDSGTSAASSPTIMRKSSGSPDS--QHCASDGSTETLAMVVVEP 766
Query: 379 FVSGLSDGMDSG-YVEDSEESS 399
+ S DSG + S+E+S
Sbjct: 767 GDTLSSPEFDSGPFSSQSDETS 788
>gi|111154084 pleckstrin homology domain containing family G member
5 isoform b [Homo sapiens]
Length = 1083
Score = 35.0 bits (79), Expect = 0.31
Identities = 28/82 (34%), Positives = 40/82 (48%), Gaps = 3/82 (3%)
Query: 319 DDEEEEEEEEEVEEDLETDGHCAERDSLLSTSSLASHDSTLSLASSQASGPALSRHLLTS 378
D++EEEEEEEE EE+ E G A + S S DS +S S L+ ++
Sbjct: 786 DEQEEEEEEEEEEEEGEDSGTSAASSPTIMRKSSGSPDS--QHCASDGSTETLAMVVVEP 843
Query: 379 FVSGLSDGMDSG-YVEDSEESS 399
+ S DSG + S+E+S
Sbjct: 844 GDTLSSPEFDSGPFSSQSDETS 865
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.132 0.395
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 37,681,649
Number of Sequences: 37866
Number of extensions: 1904127
Number of successful extensions: 20007
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 146
Number of HSP's successfully gapped in prelim test: 163
Number of HSP's that attempted gapping in prelim test: 16398
Number of HSP's gapped (non-prelim): 2261
length of query: 880
length of database: 18,247,518
effective HSP length: 111
effective length of query: 769
effective length of database: 14,044,392
effective search space: 10800137448
effective search space used: 10800137448
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 66 (30.0 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.