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Search of human proteins with 215277017
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|215277017 protein tyrosine phosphatase, non-receptor type 18
isoform 2 [Homo sapiens]
(353 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|215277017 protein tyrosine phosphatase, non-receptor type 18 ... 721 0.0
gi|18375655 protein tyrosine phosphatase, non-receptor type 18 i... 664 0.0
gi|224586931 protein tyrosine phosphatase, non-receptor type 22 ... 156 3e-38
gi|224586929 protein tyrosine phosphatase, non-receptor type 22 ... 156 3e-38
gi|196114970 protein tyrosine phosphatase, non-receptor type 12 ... 146 2e-35
gi|196114967 protein tyrosine phosphatase, non-receptor type 12 ... 146 2e-35
gi|196114951 protein tyrosine phosphatase, non-receptor type 12 ... 146 2e-35
gi|241896926 protein tyrosine phosphatase, receptor type, H isof... 102 5e-22
gi|241896924 protein tyrosine phosphatase, receptor type, H isof... 102 5e-22
gi|33356177 protein tyrosine phosphatase, non-receptor type 11 [... 99 7e-21
gi|18104993 protein tyrosine phosphatase, non-receptor type 6 is... 99 7e-21
gi|18104989 protein tyrosine phosphatase, non-receptor type 6 is... 99 7e-21
gi|18104991 protein tyrosine phosphatase, non-receptor type 6 is... 99 7e-21
gi|108802609 protein tyrosine phosphatase, non-receptor type 20 ... 96 5e-20
gi|109138563 protein tyrosine phosphatase, non-receptor type 20A... 96 5e-20
gi|4506295 protein tyrosine phosphatase, non-receptor type 4 [Ho... 93 4e-19
gi|108802611 protein tyrosine phosphatase, non-receptor type 20 ... 92 5e-19
gi|109138573 protein tyrosine phosphatase, non-receptor type 20A... 92 5e-19
gi|109138565 protein tyrosine phosphatase, non-receptor type 20A... 92 5e-19
gi|109138561 protein tyrosine phosphatase, non-receptor type 20A... 92 5e-19
gi|109138557 protein tyrosine phosphatase, non-receptor type 20A... 92 5e-19
gi|108802617 protein tyrosine phosphatase, non-receptor type 20 ... 92 5e-19
gi|108802607 protein tyrosine phosphatase, non-receptor type 20 ... 92 5e-19
gi|108802604 protein tyrosine phosphatase, non-receptor type 20 ... 92 5e-19
gi|223941891 protein tyrosine phosphatase, non-receptor type 3 i... 91 2e-18
gi|223941888 protein tyrosine phosphatase, non-receptor type 3 i... 91 2e-18
gi|223941885 protein tyrosine phosphatase, non-receptor type 3 i... 91 2e-18
gi|223941882 protein tyrosine phosphatase, non-receptor type 3 i... 91 2e-18
gi|223941879 protein tyrosine phosphatase, non-receptor type 3 i... 91 2e-18
gi|223941876 protein tyrosine phosphatase, non-receptor type 3 i... 91 2e-18
>gi|215277017 protein tyrosine phosphatase, non-receptor type 18
isoform 2 [Homo sapiens]
Length = 353
Score = 721 bits (1862), Expect = 0.0
Identities = 353/353 (100%), Positives = 353/353 (100%)
Query: 1 MSRSLDSARSFLERLEARGGREGAVLAGEFSKRCERYWAQEQEPLQTGLFCITLIKEKWL 60
MSRSLDSARSFLERLEARGGREGAVLAGEFSKRCERYWAQEQEPLQTGLFCITLIKEKWL
Sbjct: 1 MSRSLDSARSFLERLEARGGREGAVLAGEFSKRCERYWAQEQEPLQTGLFCITLIKEKWL 60
Query: 61 NEDIMLRTLKVTFQKESRSVYQLQYMSWPDRGVPSSPDHMLAMVEEARRLQGSGPEPLCV 120
NEDIMLRTLKVTFQKESRSVYQLQYMSWPDRGVPSSPDHMLAMVEEARRLQGSGPEPLCV
Sbjct: 61 NEDIMLRTLKVTFQKESRSVYQLQYMSWPDRGVPSSPDHMLAMVEEARRLQGSGPEPLCV 120
Query: 121 HCSAGCGRTGVLCTVDYVRQLLLTQMIPPDFSLFDVVLKMRKQRPAAVQTEEQYRFLYHT 180
HCSAGCGRTGVLCTVDYVRQLLLTQMIPPDFSLFDVVLKMRKQRPAAVQTEEQYRFLYHT
Sbjct: 121 HCSAGCGRTGVLCTVDYVRQLLLTQMIPPDFSLFDVVLKMRKQRPAAVQTEEQYRFLYHT 180
Query: 181 VAQMFCSTLQNASPHYQNIKENCAPLYDDALFLRTPQALLAIPRPPGGVLRSISVPGSPG 240
VAQMFCSTLQNASPHYQNIKENCAPLYDDALFLRTPQALLAIPRPPGGVLRSISVPGSPG
Sbjct: 181 VAQMFCSTLQNASPHYQNIKENCAPLYDDALFLRTPQALLAIPRPPGGVLRSISVPGSPG 240
Query: 241 HAMADTYAVVQKRGAPAGAGSGTQTGTGTGTGARSAEEAPLYSKVTPRAQRPGAHAEDAR 300
HAMADTYAVVQKRGAPAGAGSGTQTGTGTGTGARSAEEAPLYSKVTPRAQRPGAHAEDAR
Sbjct: 241 HAMADTYAVVQKRGAPAGAGSGTQTGTGTGTGARSAEEAPLYSKVTPRAQRPGAHAEDAR 300
Query: 301 GTLPGRVPADQSPAGSGAYEDVAGGAQTGGLGFNLRIGRPKGPRDPPAEWTRV 353
GTLPGRVPADQSPAGSGAYEDVAGGAQTGGLGFNLRIGRPKGPRDPPAEWTRV
Sbjct: 301 GTLPGRVPADQSPAGSGAYEDVAGGAQTGGLGFNLRIGRPKGPRDPPAEWTRV 353
>gi|18375655 protein tyrosine phosphatase, non-receptor type 18
isoform 1 [Homo sapiens]
Length = 460
Score = 664 bits (1714), Expect = 0.0
Identities = 322/322 (100%), Positives = 322/322 (100%)
Query: 32 KRCERYWAQEQEPLQTGLFCITLIKEKWLNEDIMLRTLKVTFQKESRSVYQLQYMSWPDR 91
KRCERYWAQEQEPLQTGLFCITLIKEKWLNEDIMLRTLKVTFQKESRSVYQLQYMSWPDR
Sbjct: 139 KRCERYWAQEQEPLQTGLFCITLIKEKWLNEDIMLRTLKVTFQKESRSVYQLQYMSWPDR 198
Query: 92 GVPSSPDHMLAMVEEARRLQGSGPEPLCVHCSAGCGRTGVLCTVDYVRQLLLTQMIPPDF 151
GVPSSPDHMLAMVEEARRLQGSGPEPLCVHCSAGCGRTGVLCTVDYVRQLLLTQMIPPDF
Sbjct: 199 GVPSSPDHMLAMVEEARRLQGSGPEPLCVHCSAGCGRTGVLCTVDYVRQLLLTQMIPPDF 258
Query: 152 SLFDVVLKMRKQRPAAVQTEEQYRFLYHTVAQMFCSTLQNASPHYQNIKENCAPLYDDAL 211
SLFDVVLKMRKQRPAAVQTEEQYRFLYHTVAQMFCSTLQNASPHYQNIKENCAPLYDDAL
Sbjct: 259 SLFDVVLKMRKQRPAAVQTEEQYRFLYHTVAQMFCSTLQNASPHYQNIKENCAPLYDDAL 318
Query: 212 FLRTPQALLAIPRPPGGVLRSISVPGSPGHAMADTYAVVQKRGAPAGAGSGTQTGTGTGT 271
FLRTPQALLAIPRPPGGVLRSISVPGSPGHAMADTYAVVQKRGAPAGAGSGTQTGTGTGT
Sbjct: 319 FLRTPQALLAIPRPPGGVLRSISVPGSPGHAMADTYAVVQKRGAPAGAGSGTQTGTGTGT 378
Query: 272 GARSAEEAPLYSKVTPRAQRPGAHAEDARGTLPGRVPADQSPAGSGAYEDVAGGAQTGGL 331
GARSAEEAPLYSKVTPRAQRPGAHAEDARGTLPGRVPADQSPAGSGAYEDVAGGAQTGGL
Sbjct: 379 GARSAEEAPLYSKVTPRAQRPGAHAEDARGTLPGRVPADQSPAGSGAYEDVAGGAQTGGL 438
Query: 332 GFNLRIGRPKGPRDPPAEWTRV 353
GFNLRIGRPKGPRDPPAEWTRV
Sbjct: 439 GFNLRIGRPKGPRDPPAEWTRV 460
Score = 63.2 bits (152), Expect = 3e-10
Identities = 33/40 (82%), Positives = 34/40 (85%), Gaps = 2/40 (5%)
Query: 1 MSRSLDSARSFLERLEARGGREGAVLAGEFS--KRCERYW 38
MSRSLDSARSFLERLEARGGREGAVLAGEFS + C W
Sbjct: 1 MSRSLDSARSFLERLEARGGREGAVLAGEFSDIQACSAAW 40
>gi|224586931 protein tyrosine phosphatase, non-receptor type 22
(lymphoid) isoform 2 [Homo sapiens]
Length = 691
Score = 156 bits (394), Expect = 3e-38
Identities = 73/155 (47%), Positives = 104/155 (67%), Gaps = 2/155 (1%)
Query: 32 KRCERYWAQEQE-PLQTGLFCITLIKEKWLNEDIMLRTLKVTFQKESRSVYQLQYMSWPD 90
K+CERYWA+ E L+ G F ++ EK D ++RTLKV F E+R++YQ Y +WPD
Sbjct: 137 KKCERYWAEPGEMQLEFGPFSVSCEAEK-RKSDYIIRTLKVKFNSETRTIYQFHYKNWPD 195
Query: 91 RGVPSSPDHMLAMVEEARRLQGSGPEPLCVHCSAGCGRTGVLCTVDYVRQLLLTQMIPPD 150
VPSS D +L ++ + R Q P+C+HCSAGCGRTGV+C +DY LL +IP +
Sbjct: 196 HDVPSSIDPILELIWDVRCYQEDDSVPICIHCSAGCGRTGVICAIDYTWMLLKDGIIPEN 255
Query: 151 FSLFDVVLKMRKQRPAAVQTEEQYRFLYHTVAQMF 185
FS+F ++ +MR QRP+ VQT+EQY +Y+ V ++F
Sbjct: 256 FSVFSLIREMRTQRPSLVQTQEQYELVYNAVLELF 290
>gi|224586929 protein tyrosine phosphatase, non-receptor type 22
(lymphoid) isoform 1 [Homo sapiens]
Length = 807
Score = 156 bits (394), Expect = 3e-38
Identities = 73/155 (47%), Positives = 104/155 (67%), Gaps = 2/155 (1%)
Query: 32 KRCERYWAQEQE-PLQTGLFCITLIKEKWLNEDIMLRTLKVTFQKESRSVYQLQYMSWPD 90
K+CERYWA+ E L+ G F ++ EK D ++RTLKV F E+R++YQ Y +WPD
Sbjct: 137 KKCERYWAEPGEMQLEFGPFSVSCEAEK-RKSDYIIRTLKVKFNSETRTIYQFHYKNWPD 195
Query: 91 RGVPSSPDHMLAMVEEARRLQGSGPEPLCVHCSAGCGRTGVLCTVDYVRQLLLTQMIPPD 150
VPSS D +L ++ + R Q P+C+HCSAGCGRTGV+C +DY LL +IP +
Sbjct: 196 HDVPSSIDPILELIWDVRCYQEDDSVPICIHCSAGCGRTGVICAIDYTWMLLKDGIIPEN 255
Query: 151 FSLFDVVLKMRKQRPAAVQTEEQYRFLYHTVAQMF 185
FS+F ++ +MR QRP+ VQT+EQY +Y+ V ++F
Sbjct: 256 FSVFSLIREMRTQRPSLVQTQEQYELVYNAVLELF 290
Score = 30.8 bits (68), Expect = 1.9
Identities = 11/19 (57%), Positives = 13/19 (68%)
Query: 332 GFNLRIGRPKGPRDPPAEW 350
GF R +PKGPR+PP W
Sbjct: 787 GFANRFSKPKGPRNPPPTW 805
>gi|196114970 protein tyrosine phosphatase, non-receptor type 12
isoform 3 [Homo sapiens]
Length = 650
Score = 146 bits (369), Expect = 2e-35
Identities = 71/160 (44%), Positives = 102/160 (63%), Gaps = 2/160 (1%)
Query: 32 KRCERYWA-QEQEPLQTGLFCITLIKEKWLNEDIMLRTLKVTFQKESRSVYQLQYMSWPD 90
K+CERYW ++P+ F I+ E+ D +RTL + FQ ESR +YQ Y++WPD
Sbjct: 11 KKCERYWPLYGEDPITFAPFKISCEDEQ-ARTDYFIRTLLLEFQNESRRLYQFHYVNWPD 69
Query: 91 RGVPSSPDHMLAMVEEARRLQGSGPEPLCVHCSAGCGRTGVLCTVDYVRQLLLTQMIPPD 150
VPSS D +L M+ R+ Q P+C+HCSAGCGRTG +C +DY LL IP +
Sbjct: 70 HDVPSSFDSILDMISLMRKYQEHEDVPICIHCSAGCGRTGAICAIDYTWNLLKAGKIPEE 129
Query: 151 FSLFDVVLKMRKQRPAAVQTEEQYRFLYHTVAQMFCSTLQ 190
F++F+++ +MR QR +AVQT+EQY ++ +AQ+F LQ
Sbjct: 130 FNVFNLIQEMRTQRHSAVQTKEQYELVHRAIAQLFEKQLQ 169
Score = 41.2 bits (95), Expect = 0.001
Identities = 15/21 (71%), Positives = 18/21 (85%)
Query: 331 LGFNLRIGRPKGPRDPPAEWT 351
+GF R G+PKGPRDPP+EWT
Sbjct: 630 IGFGNRCGKPKGPRDPPSEWT 650
>gi|196114967 protein tyrosine phosphatase, non-receptor type 12
isoform 2 [Homo sapiens]
Length = 661
Score = 146 bits (369), Expect = 2e-35
Identities = 71/160 (44%), Positives = 102/160 (63%), Gaps = 2/160 (1%)
Query: 32 KRCERYWA-QEQEPLQTGLFCITLIKEKWLNEDIMLRTLKVTFQKESRSVYQLQYMSWPD 90
K+CERYW ++P+ F I+ E+ D +RTL + FQ ESR +YQ Y++WPD
Sbjct: 22 KKCERYWPLYGEDPITFAPFKISCEDEQ-ARTDYFIRTLLLEFQNESRRLYQFHYVNWPD 80
Query: 91 RGVPSSPDHMLAMVEEARRLQGSGPEPLCVHCSAGCGRTGVLCTVDYVRQLLLTQMIPPD 150
VPSS D +L M+ R+ Q P+C+HCSAGCGRTG +C +DY LL IP +
Sbjct: 81 HDVPSSFDSILDMISLMRKYQEHEDVPICIHCSAGCGRTGAICAIDYTWNLLKAGKIPEE 140
Query: 151 FSLFDVVLKMRKQRPAAVQTEEQYRFLYHTVAQMFCSTLQ 190
F++F+++ +MR QR +AVQT+EQY ++ +AQ+F LQ
Sbjct: 141 FNVFNLIQEMRTQRHSAVQTKEQYELVHRAIAQLFEKQLQ 180
Score = 41.2 bits (95), Expect = 0.001
Identities = 15/21 (71%), Positives = 18/21 (85%)
Query: 331 LGFNLRIGRPKGPRDPPAEWT 351
+GF R G+PKGPRDPP+EWT
Sbjct: 641 IGFGNRCGKPKGPRDPPSEWT 661
>gi|196114951 protein tyrosine phosphatase, non-receptor type 12
isoform 1 [Homo sapiens]
Length = 780
Score = 146 bits (369), Expect = 2e-35
Identities = 71/160 (44%), Positives = 102/160 (63%), Gaps = 2/160 (1%)
Query: 32 KRCERYWA-QEQEPLQTGLFCITLIKEKWLNEDIMLRTLKVTFQKESRSVYQLQYMSWPD 90
K+CERYW ++P+ F I+ E+ D +RTL + FQ ESR +YQ Y++WPD
Sbjct: 141 KKCERYWPLYGEDPITFAPFKISCEDEQ-ARTDYFIRTLLLEFQNESRRLYQFHYVNWPD 199
Query: 91 RGVPSSPDHMLAMVEEARRLQGSGPEPLCVHCSAGCGRTGVLCTVDYVRQLLLTQMIPPD 150
VPSS D +L M+ R+ Q P+C+HCSAGCGRTG +C +DY LL IP +
Sbjct: 200 HDVPSSFDSILDMISLMRKYQEHEDVPICIHCSAGCGRTGAICAIDYTWNLLKAGKIPEE 259
Query: 151 FSLFDVVLKMRKQRPAAVQTEEQYRFLYHTVAQMFCSTLQ 190
F++F+++ +MR QR +AVQT+EQY ++ +AQ+F LQ
Sbjct: 260 FNVFNLIQEMRTQRHSAVQTKEQYELVHRAIAQLFEKQLQ 299
Score = 41.2 bits (95), Expect = 0.001
Identities = 15/21 (71%), Positives = 18/21 (85%)
Query: 331 LGFNLRIGRPKGPRDPPAEWT 351
+GF R G+PKGPRDPP+EWT
Sbjct: 760 IGFGNRCGKPKGPRDPPSEWT 780
>gi|241896926 protein tyrosine phosphatase, receptor type, H isoform
2 precursor [Homo sapiens]
Length = 937
Score = 102 bits (254), Expect = 5e-22
Identities = 66/165 (40%), Positives = 89/165 (53%), Gaps = 14/165 (8%)
Query: 33 RCERYWAQEQEPLQTGLFCITLIKEK----WLNEDIMLRTLKVTFQKESRSVYQLQYMSW 88
+CE YW + +P G +TL+ E+ W +++L L+V QK + SV Q Y +W
Sbjct: 750 KCEHYWPLDSQPCTHGHLRVTLVGEEVMENWTVRELLL--LQVEEQK-TLSVRQFHYQAW 806
Query: 89 PDRGVPSSPDHMLAMVEEARRLQGSGPE--PLCVHCSAGCGRTGVLCTVD-YVRQLLLTQ 145
PD GVPSSPD +LA R+ E P VHCSAG GRTG L +D +RQL
Sbjct: 807 PDHGVPSSPDTLLAFWRMLRQWLDQTMEGGPPIVHCSAGVGRTGTLIALDVLLRQLQSEG 866
Query: 146 MIPPDFSLFDVVLKMRKQRPAAVQTEEQYRFLYHTVAQMFCSTLQ 190
++ P F V KMR+ RP VQTE QY FL+ + + + Q
Sbjct: 867 LLGP----FSFVRKMRESRPLMVQTEAQYVFLHQCILRFLQQSAQ 907
>gi|241896924 protein tyrosine phosphatase, receptor type, H isoform 1
precursor [Homo sapiens]
Length = 1115
Score = 102 bits (254), Expect = 5e-22
Identities = 66/165 (40%), Positives = 89/165 (53%), Gaps = 14/165 (8%)
Query: 33 RCERYWAQEQEPLQTGLFCITLIKEK----WLNEDIMLRTLKVTFQKESRSVYQLQYMSW 88
+CE YW + +P G +TL+ E+ W +++L L+V QK + SV Q Y +W
Sbjct: 928 KCEHYWPLDSQPCTHGHLRVTLVGEEVMENWTVRELLL--LQVEEQK-TLSVRQFHYQAW 984
Query: 89 PDRGVPSSPDHMLAMVEEARRLQGSGPE--PLCVHCSAGCGRTGVLCTVD-YVRQLLLTQ 145
PD GVPSSPD +LA R+ E P VHCSAG GRTG L +D +RQL
Sbjct: 985 PDHGVPSSPDTLLAFWRMLRQWLDQTMEGGPPIVHCSAGVGRTGTLIALDVLLRQLQSEG 1044
Query: 146 MIPPDFSLFDVVLKMRKQRPAAVQTEEQYRFLYHTVAQMFCSTLQ 190
++ P F V KMR+ RP VQTE QY FL+ + + + Q
Sbjct: 1045 LLGP----FSFVRKMRESRPLMVQTEAQYVFLHQCILRFLQQSAQ 1085
>gi|33356177 protein tyrosine phosphatase, non-receptor type 11
[Homo sapiens]
Length = 593
Score = 98.6 bits (244), Expect = 7e-21
Identities = 60/173 (34%), Positives = 89/173 (51%), Gaps = 7/173 (4%)
Query: 33 RCERYWAQEQEPLQTGLFCITLIKEKWLNEDIMLRTLKVTFQKES---RSVYQLQYMSWP 89
+C +YW E + G+ + +KE + D LR LK++ + R+V+Q + +WP
Sbjct: 366 KCVKYWPDEYALKEYGVMRVRNVKESAAH-DYTLRELKLSKVGQGNTERTVWQYHFRTWP 424
Query: 90 DRGVPSSPDHMLAMVEEARRLQGSGPE--PLCVHCSAGCGRTGVLCTVDYVRQLLLTQMI 147
D GVPS P +L +EE Q S + P+ VHCSAG GRTG +D + ++ + +
Sbjct: 425 DHGVPSDPGGVLDFLEEVHHKQESIMDAGPVVVHCSAGIGRTGTFIVIDILIDIIREKGV 484
Query: 148 PPDFSLFDVVLKMRKQRPAAVQTEEQYRFLYHTVAQMFCSTLQNASPHYQNIK 200
D + + +R QR VQTE QYRF+Y V Q + TLQ Q K
Sbjct: 485 DCDIDVPKTIQMVRSQRSGMVQTEAQYRFIYMAV-QHYIETLQRRIEEEQKSK 536
>gi|18104993 protein tyrosine phosphatase, non-receptor type 6
isoform 3 [Homo sapiens]
Length = 624
Score = 98.6 bits (244), Expect = 7e-21
Identities = 56/161 (34%), Positives = 86/161 (53%), Gaps = 6/161 (3%)
Query: 33 RCERYWAQEQEPLQTGLFCITLIKEKWLNEDIMLRTLKVTFQKES---RSVYQLQYMSWP 89
+C YW + G + +T E E LRTL+V+ R ++ QY+SWP
Sbjct: 360 KCVPYWPEVGMQRAYGPYSVTNCGEHDTTE-YKLRTLQVSPLDNGDLIREIWHYQYLSWP 418
Query: 90 DRGVPSSPDHMLAMVEEARRLQGSGPE--PLCVHCSAGCGRTGVLCTVDYVRQLLLTQMI 147
D GVPS P +L+ +++ + Q S P P+ VHCSAG GRTG + +D + + + T+ +
Sbjct: 419 DHGVPSEPGGVLSFLDQINQRQESLPHAGPIIVHCSAGIGRTGTIIVIDMLMENISTKGL 478
Query: 148 PPDFSLFDVVLKMRKQRPAAVQTEEQYRFLYHTVAQMFCST 188
D + + +R QR VQTE QY+F+Y +AQ +T
Sbjct: 479 DCDIDIQKTIQMVRAQRSGMVQTEAQYKFIYVAIAQFIETT 519
>gi|18104989 protein tyrosine phosphatase, non-receptor type 6
isoform 1 [Homo sapiens]
Length = 595
Score = 98.6 bits (244), Expect = 7e-21
Identities = 56/161 (34%), Positives = 86/161 (53%), Gaps = 6/161 (3%)
Query: 33 RCERYWAQEQEPLQTGLFCITLIKEKWLNEDIMLRTLKVTFQKES---RSVYQLQYMSWP 89
+C YW + G + +T E E LRTL+V+ R ++ QY+SWP
Sbjct: 360 KCVPYWPEVGMQRAYGPYSVTNCGEHDTTE-YKLRTLQVSPLDNGDLIREIWHYQYLSWP 418
Query: 90 DRGVPSSPDHMLAMVEEARRLQGSGPE--PLCVHCSAGCGRTGVLCTVDYVRQLLLTQMI 147
D GVPS P +L+ +++ + Q S P P+ VHCSAG GRTG + +D + + + T+ +
Sbjct: 419 DHGVPSEPGGVLSFLDQINQRQESLPHAGPIIVHCSAGIGRTGTIIVIDMLMENISTKGL 478
Query: 148 PPDFSLFDVVLKMRKQRPAAVQTEEQYRFLYHTVAQMFCST 188
D + + +R QR VQTE QY+F+Y +AQ +T
Sbjct: 479 DCDIDIQKTIQMVRAQRSGMVQTEAQYKFIYVAIAQFIETT 519
>gi|18104991 protein tyrosine phosphatase, non-receptor type 6
isoform 2 [Homo sapiens]
Length = 597
Score = 98.6 bits (244), Expect = 7e-21
Identities = 56/161 (34%), Positives = 86/161 (53%), Gaps = 6/161 (3%)
Query: 33 RCERYWAQEQEPLQTGLFCITLIKEKWLNEDIMLRTLKVTFQKES---RSVYQLQYMSWP 89
+C YW + G + +T E E LRTL+V+ R ++ QY+SWP
Sbjct: 362 KCVPYWPEVGMQRAYGPYSVTNCGEHDTTE-YKLRTLQVSPLDNGDLIREIWHYQYLSWP 420
Query: 90 DRGVPSSPDHMLAMVEEARRLQGSGPE--PLCVHCSAGCGRTGVLCTVDYVRQLLLTQMI 147
D GVPS P +L+ +++ + Q S P P+ VHCSAG GRTG + +D + + + T+ +
Sbjct: 421 DHGVPSEPGGVLSFLDQINQRQESLPHAGPIIVHCSAGIGRTGTIIVIDMLMENISTKGL 480
Query: 148 PPDFSLFDVVLKMRKQRPAAVQTEEQYRFLYHTVAQMFCST 188
D + + +R QR VQTE QY+F+Y +AQ +T
Sbjct: 481 DCDIDIQKTIQMVRAQRSGMVQTEAQYKFIYVAIAQFIETT 521
>gi|108802609 protein tyrosine phosphatase, non-receptor type 20
isoform 4 [Homo sapiens]
Length = 269
Score = 95.9 bits (237), Expect = 5e-20
Identities = 54/134 (40%), Positives = 76/134 (56%), Gaps = 9/134 (6%)
Query: 51 CITLIKEKWLNEDIMLRTLKVTFQKESRSVYQLQYMSWPDRGVPSSPDHMLAMVEEARRL 110
C+ +++EK DIM + T S SV QLQ+ WPD G P+S D + + AR+
Sbjct: 137 CLKILEEKTAAYDIMQEFMTGT----SHSVKQLQFTKWPDHGTPASADSFIKYIRYARKS 192
Query: 111 QGSGPEPLCVHCSAGCGRTGVLCTVDYVRQLLLTQMIPPDFSLFDVVLKMRKQRPAAVQT 170
+G P+ VHCSAG GRTGV VD V ++ F++ D+V +MR+QR VQT
Sbjct: 193 HLTG--PMVVHCSAGIGRTGVFLCVDVVFCAIVKNC---SFNIMDIVAQMREQRSGMVQT 247
Query: 171 EEQYRFLYHTVAQM 184
+EQY F Y V ++
Sbjct: 248 KEQYHFCYDIVLEV 261
>gi|109138563 protein tyrosine phosphatase, non-receptor type 20A
isoform 4 [Homo sapiens]
Length = 269
Score = 95.9 bits (237), Expect = 5e-20
Identities = 54/134 (40%), Positives = 76/134 (56%), Gaps = 9/134 (6%)
Query: 51 CITLIKEKWLNEDIMLRTLKVTFQKESRSVYQLQYMSWPDRGVPSSPDHMLAMVEEARRL 110
C+ +++EK DIM + T S SV QLQ+ WPD G P+S D + + AR+
Sbjct: 137 CLKILEEKTAAYDIMQEFMTGT----SHSVKQLQFTKWPDHGTPASADSFIKYIRYARKS 192
Query: 111 QGSGPEPLCVHCSAGCGRTGVLCTVDYVRQLLLTQMIPPDFSLFDVVLKMRKQRPAAVQT 170
+G P+ VHCSAG GRTGV VD V ++ F++ D+V +MR+QR VQT
Sbjct: 193 HLTG--PMVVHCSAGIGRTGVFLCVDVVFCAIVKNC---SFNIMDIVAQMREQRSGMVQT 247
Query: 171 EEQYRFLYHTVAQM 184
+EQY F Y V ++
Sbjct: 248 KEQYHFCYDIVLEV 261
>gi|4506295 protein tyrosine phosphatase, non-receptor type 4 [Homo
sapiens]
Length = 926
Score = 92.8 bits (229), Expect = 4e-19
Identities = 54/154 (35%), Positives = 80/154 (51%), Gaps = 4/154 (2%)
Query: 33 RCERYWAQEQEPLQTGLFCITLIKEKWLNEDIMLR-TLKVTFQKESRSVYQLQYMSWPDR 91
+C +YW + G + +T E+ I + TL + ESR + Q+QY++WPD
Sbjct: 762 KCHQYWPEPTGSSSYGCYQVTCHSEEGNTAYIFRKMTLFNQEKNESRPLTQIQYIAWPDH 821
Query: 92 GVPSSPDHMLAMVEEARRLQGSGPEPLCVHCSAGCGRTGVLCTVDYVRQLLLTQMIPPDF 151
GVP L V R + EP+ VHCSAG GRTGVL T++ + L + P +
Sbjct: 822 GVPDDSSDFLDFVCHVRNKRAGKEEPVVVHCSAGIGRTGVLITME--TAMCLIECNQPVY 879
Query: 152 SLFDVVLKMRKQRPAAVQTEEQYRFLYHTVAQMF 185
L D+V MR QR +QT QYRF+ + +++
Sbjct: 880 PL-DIVRTMRDQRAMMIQTPSQYRFVCEAILKVY 912
>gi|108802611 protein tyrosine phosphatase, non-receptor type 20
isoform 5 [Homo sapiens]
Length = 228
Score = 92.4 bits (228), Expect = 5e-19
Identities = 57/155 (36%), Positives = 85/155 (54%), Gaps = 9/155 (5%)
Query: 33 RCERYWAQE-QEPLQTGLFCITLIKEKWLNEDIMLRTLKVTFQKE--SRSVYQLQYMSWP 89
+C YW ++PL+ F + L + L + ++R +V + S SV QLQ+ WP
Sbjct: 72 KCYHYWPISLKKPLELKHFRVFLENYQIL-QYFIIRMFQVVEKSTGTSHSVKQLQFTKWP 130
Query: 90 DRGVPSSPDHMLAMVEEARRLQGSGPEPLCVHCSAGCGRTGVLCTVDYVRQLLLTQMIPP 149
D G P+S D + + AR+ +G P+ VHCSAG GRTGV VD V ++
Sbjct: 131 DHGTPASADSFIKYIRYARKSHLTG--PMVVHCSAGIGRTGVFLCVDVVFCAIVKNC--- 185
Query: 150 DFSLFDVVLKMRKQRPAAVQTEEQYRFLYHTVAQM 184
F++ D+V +MR+QR VQT+EQY F Y V ++
Sbjct: 186 SFNIMDIVAQMREQRSGMVQTKEQYHFCYDIVLEV 220
>gi|109138573 protein tyrosine phosphatase, non-receptor type 20A
isoform 8 [Homo sapiens]
Length = 339
Score = 92.4 bits (228), Expect = 5e-19
Identities = 57/155 (36%), Positives = 85/155 (54%), Gaps = 9/155 (5%)
Query: 33 RCERYWAQE-QEPLQTGLFCITLIKEKWLNEDIMLRTLKVTFQKE--SRSVYQLQYMSWP 89
+C YW ++PL+ F + L + L + ++R +V + S SV QLQ+ WP
Sbjct: 183 KCYHYWPISLKKPLELKHFRVFLENYQIL-QYFIIRMFQVVEKSTGTSHSVKQLQFTKWP 241
Query: 90 DRGVPSSPDHMLAMVEEARRLQGSGPEPLCVHCSAGCGRTGVLCTVDYVRQLLLTQMIPP 149
D G P+S D + + AR+ +G P+ VHCSAG GRTGV VD V ++
Sbjct: 242 DHGTPASADSFIKYIRYARKSHLTG--PMVVHCSAGIGRTGVFLCVDVVFCAIVKNC--- 296
Query: 150 DFSLFDVVLKMRKQRPAAVQTEEQYRFLYHTVAQM 184
F++ D+V +MR+QR VQT+EQY F Y V ++
Sbjct: 297 SFNIMDIVAQMREQRSGMVQTKEQYHFCYDIVLEV 331
>gi|109138565 protein tyrosine phosphatase, non-receptor type 20A
isoform 5 [Homo sapiens]
Length = 228
Score = 92.4 bits (228), Expect = 5e-19
Identities = 57/155 (36%), Positives = 85/155 (54%), Gaps = 9/155 (5%)
Query: 33 RCERYWAQE-QEPLQTGLFCITLIKEKWLNEDIMLRTLKVTFQKE--SRSVYQLQYMSWP 89
+C YW ++PL+ F + L + L + ++R +V + S SV QLQ+ WP
Sbjct: 72 KCYHYWPISLKKPLELKHFRVFLENYQIL-QYFIIRMFQVVEKSTGTSHSVKQLQFTKWP 130
Query: 90 DRGVPSSPDHMLAMVEEARRLQGSGPEPLCVHCSAGCGRTGVLCTVDYVRQLLLTQMIPP 149
D G P+S D + + AR+ +G P+ VHCSAG GRTGV VD V ++
Sbjct: 131 DHGTPASADSFIKYIRYARKSHLTG--PMVVHCSAGIGRTGVFLCVDVVFCAIVKNC--- 185
Query: 150 DFSLFDVVLKMRKQRPAAVQTEEQYRFLYHTVAQM 184
F++ D+V +MR+QR VQT+EQY F Y V ++
Sbjct: 186 SFNIMDIVAQMREQRSGMVQTKEQYHFCYDIVLEV 220
>gi|109138561 protein tyrosine phosphatase, non-receptor type 20A
isoform 3 [Homo sapiens]
Length = 411
Score = 92.4 bits (228), Expect = 5e-19
Identities = 57/155 (36%), Positives = 85/155 (54%), Gaps = 9/155 (5%)
Query: 33 RCERYWAQE-QEPLQTGLFCITLIKEKWLNEDIMLRTLKVTFQKE--SRSVYQLQYMSWP 89
+C YW ++PL+ F + L + L + ++R +V + S SV QLQ+ WP
Sbjct: 255 KCYHYWPISLKKPLELKHFRVFLENYQIL-QYFIIRMFQVVEKSTGTSHSVKQLQFTKWP 313
Query: 90 DRGVPSSPDHMLAMVEEARRLQGSGPEPLCVHCSAGCGRTGVLCTVDYVRQLLLTQMIPP 149
D G P+S D + + AR+ +G P+ VHCSAG GRTGV VD V ++
Sbjct: 314 DHGTPASADSFIKYIRYARKSHLTG--PMVVHCSAGIGRTGVFLCVDVVFCAIVKNC--- 368
Query: 150 DFSLFDVVLKMRKQRPAAVQTEEQYRFLYHTVAQM 184
F++ D+V +MR+QR VQT+EQY F Y V ++
Sbjct: 369 SFNIMDIVAQMREQRSGMVQTKEQYHFCYDIVLEV 403
>gi|109138557 protein tyrosine phosphatase, non-receptor type 20A
isoform 1 [Homo sapiens]
Length = 420
Score = 92.4 bits (228), Expect = 5e-19
Identities = 57/155 (36%), Positives = 85/155 (54%), Gaps = 9/155 (5%)
Query: 33 RCERYWAQE-QEPLQTGLFCITLIKEKWLNEDIMLRTLKVTFQKE--SRSVYQLQYMSWP 89
+C YW ++PL+ F + L + L + ++R +V + S SV QLQ+ WP
Sbjct: 264 KCYHYWPISLKKPLELKHFRVFLENYQIL-QYFIIRMFQVVEKSTGTSHSVKQLQFTKWP 322
Query: 90 DRGVPSSPDHMLAMVEEARRLQGSGPEPLCVHCSAGCGRTGVLCTVDYVRQLLLTQMIPP 149
D G P+S D + + AR+ +G P+ VHCSAG GRTGV VD V ++
Sbjct: 323 DHGTPASADSFIKYIRYARKSHLTG--PMVVHCSAGIGRTGVFLCVDVVFCAIVKNC--- 377
Query: 150 DFSLFDVVLKMRKQRPAAVQTEEQYRFLYHTVAQM 184
F++ D+V +MR+QR VQT+EQY F Y V ++
Sbjct: 378 SFNIMDIVAQMREQRSGMVQTKEQYHFCYDIVLEV 412
>gi|108802617 protein tyrosine phosphatase, non-receptor type 20
isoform 8 [Homo sapiens]
Length = 339
Score = 92.4 bits (228), Expect = 5e-19
Identities = 57/155 (36%), Positives = 85/155 (54%), Gaps = 9/155 (5%)
Query: 33 RCERYWAQE-QEPLQTGLFCITLIKEKWLNEDIMLRTLKVTFQKE--SRSVYQLQYMSWP 89
+C YW ++PL+ F + L + L + ++R +V + S SV QLQ+ WP
Sbjct: 183 KCYHYWPISLKKPLELKHFRVFLENYQIL-QYFIIRMFQVVEKSTGTSHSVKQLQFTKWP 241
Query: 90 DRGVPSSPDHMLAMVEEARRLQGSGPEPLCVHCSAGCGRTGVLCTVDYVRQLLLTQMIPP 149
D G P+S D + + AR+ +G P+ VHCSAG GRTGV VD V ++
Sbjct: 242 DHGTPASADSFIKYIRYARKSHLTG--PMVVHCSAGIGRTGVFLCVDVVFCAIVKNC--- 296
Query: 150 DFSLFDVVLKMRKQRPAAVQTEEQYRFLYHTVAQM 184
F++ D+V +MR+QR VQT+EQY F Y V ++
Sbjct: 297 SFNIMDIVAQMREQRSGMVQTKEQYHFCYDIVLEV 331
>gi|108802607 protein tyrosine phosphatase, non-receptor type 20
isoform 3 [Homo sapiens]
Length = 411
Score = 92.4 bits (228), Expect = 5e-19
Identities = 57/155 (36%), Positives = 85/155 (54%), Gaps = 9/155 (5%)
Query: 33 RCERYWAQE-QEPLQTGLFCITLIKEKWLNEDIMLRTLKVTFQKE--SRSVYQLQYMSWP 89
+C YW ++PL+ F + L + L + ++R +V + S SV QLQ+ WP
Sbjct: 255 KCYHYWPISLKKPLELKHFRVFLENYQIL-QYFIIRMFQVVEKSTGTSHSVKQLQFTKWP 313
Query: 90 DRGVPSSPDHMLAMVEEARRLQGSGPEPLCVHCSAGCGRTGVLCTVDYVRQLLLTQMIPP 149
D G P+S D + + AR+ +G P+ VHCSAG GRTGV VD V ++
Sbjct: 314 DHGTPASADSFIKYIRYARKSHLTG--PMVVHCSAGIGRTGVFLCVDVVFCAIVKNC--- 368
Query: 150 DFSLFDVVLKMRKQRPAAVQTEEQYRFLYHTVAQM 184
F++ D+V +MR+QR VQT+EQY F Y V ++
Sbjct: 369 SFNIMDIVAQMREQRSGMVQTKEQYHFCYDIVLEV 403
>gi|108802604 protein tyrosine phosphatase, non-receptor type 20
isoform 1 [Homo sapiens]
Length = 420
Score = 92.4 bits (228), Expect = 5e-19
Identities = 57/155 (36%), Positives = 85/155 (54%), Gaps = 9/155 (5%)
Query: 33 RCERYWAQE-QEPLQTGLFCITLIKEKWLNEDIMLRTLKVTFQKE--SRSVYQLQYMSWP 89
+C YW ++PL+ F + L + L + ++R +V + S SV QLQ+ WP
Sbjct: 264 KCYHYWPISLKKPLELKHFRVFLENYQIL-QYFIIRMFQVVEKSTGTSHSVKQLQFTKWP 322
Query: 90 DRGVPSSPDHMLAMVEEARRLQGSGPEPLCVHCSAGCGRTGVLCTVDYVRQLLLTQMIPP 149
D G P+S D + + AR+ +G P+ VHCSAG GRTGV VD V ++
Sbjct: 323 DHGTPASADSFIKYIRYARKSHLTG--PMVVHCSAGIGRTGVFLCVDVVFCAIVKNC--- 377
Query: 150 DFSLFDVVLKMRKQRPAAVQTEEQYRFLYHTVAQM 184
F++ D+V +MR+QR VQT+EQY F Y V ++
Sbjct: 378 SFNIMDIVAQMREQRSGMVQTKEQYHFCYDIVLEV 412
>gi|223941891 protein tyrosine phosphatase, non-receptor type 3
isoform 6 [Homo sapiens]
Length = 581
Score = 90.5 bits (223), Expect = 2e-18
Identities = 56/154 (36%), Positives = 78/154 (50%), Gaps = 5/154 (3%)
Query: 33 RCERYWAQEQEPLQTGLFCITLIKEKWLNEDIMLRTLKVTFQK-ESRSVYQLQYMSWPDR 91
+C +YW + + G F I E + L Q E +V LQY++WPD
Sbjct: 421 KCHQYWPDPPDVMNHGGFHIQCQSEDCTIAYVSREMLVTNTQTGEEHTVTHLQYVAWPDH 480
Query: 92 GVPSSPDHMLAMVEEARRLQGSGPEPLCVHCSAGCGRTGVLCTVDYVRQLLLTQMIPPDF 151
GVP L V R L+ EP+ VHCSAG GRTGVL T++ + LT+ P +
Sbjct: 481 GVPDDSSDFLEFVNYVRSLRVDS-EPVLVHCSAGIGRTGVLVTME--TAMCLTERNLPIY 537
Query: 152 SLFDVVLKMRKQRPAAVQTEEQYRFLYHTVAQMF 185
L D+V KMR QR VQT QY+F+ + +++
Sbjct: 538 PL-DIVRKMRDQRAMMVQTSSQYKFVCEAILRVY 570
>gi|223941888 protein tyrosine phosphatase, non-receptor type 3
isoform 5 [Homo sapiens]
Length = 626
Score = 90.5 bits (223), Expect = 2e-18
Identities = 56/154 (36%), Positives = 78/154 (50%), Gaps = 5/154 (3%)
Query: 33 RCERYWAQEQEPLQTGLFCITLIKEKWLNEDIMLRTLKVTFQK-ESRSVYQLQYMSWPDR 91
+C +YW + + G F I E + L Q E +V LQY++WPD
Sbjct: 466 KCHQYWPDPPDVMNHGGFHIQCQSEDCTIAYVSREMLVTNTQTGEEHTVTHLQYVAWPDH 525
Query: 92 GVPSSPDHMLAMVEEARRLQGSGPEPLCVHCSAGCGRTGVLCTVDYVRQLLLTQMIPPDF 151
GVP L V R L+ EP+ VHCSAG GRTGVL T++ + LT+ P +
Sbjct: 526 GVPDDSSDFLEFVNYVRSLRVDS-EPVLVHCSAGIGRTGVLVTME--TAMCLTERNLPIY 582
Query: 152 SLFDVVLKMRKQRPAAVQTEEQYRFLYHTVAQMF 185
L D+V KMR QR VQT QY+F+ + +++
Sbjct: 583 PL-DIVRKMRDQRAMMVQTSSQYKFVCEAILRVY 615
>gi|223941885 protein tyrosine phosphatase, non-receptor type 3
isoform 4 [Homo sapiens]
Length = 737
Score = 90.5 bits (223), Expect = 2e-18
Identities = 56/154 (36%), Positives = 78/154 (50%), Gaps = 5/154 (3%)
Query: 33 RCERYWAQEQEPLQTGLFCITLIKEKWLNEDIMLRTLKVTFQK-ESRSVYQLQYMSWPDR 91
+C +YW + + G F I E + L Q E +V LQY++WPD
Sbjct: 577 KCHQYWPDPPDVMNHGGFHIQCQSEDCTIAYVSREMLVTNTQTGEEHTVTHLQYVAWPDH 636
Query: 92 GVPSSPDHMLAMVEEARRLQGSGPEPLCVHCSAGCGRTGVLCTVDYVRQLLLTQMIPPDF 151
GVP L V R L+ EP+ VHCSAG GRTGVL T++ + LT+ P +
Sbjct: 637 GVPDDSSDFLEFVNYVRSLRVDS-EPVLVHCSAGIGRTGVLVTME--TAMCLTERNLPIY 693
Query: 152 SLFDVVLKMRKQRPAAVQTEEQYRFLYHTVAQMF 185
L D+V KMR QR VQT QY+F+ + +++
Sbjct: 694 PL-DIVRKMRDQRAMMVQTSSQYKFVCEAILRVY 726
>gi|223941882 protein tyrosine phosphatase, non-receptor type 3
isoform 3 [Homo sapiens]
Length = 782
Score = 90.5 bits (223), Expect = 2e-18
Identities = 56/154 (36%), Positives = 78/154 (50%), Gaps = 5/154 (3%)
Query: 33 RCERYWAQEQEPLQTGLFCITLIKEKWLNEDIMLRTLKVTFQK-ESRSVYQLQYMSWPDR 91
+C +YW + + G F I E + L Q E +V LQY++WPD
Sbjct: 622 KCHQYWPDPPDVMNHGGFHIQCQSEDCTIAYVSREMLVTNTQTGEEHTVTHLQYVAWPDH 681
Query: 92 GVPSSPDHMLAMVEEARRLQGSGPEPLCVHCSAGCGRTGVLCTVDYVRQLLLTQMIPPDF 151
GVP L V R L+ EP+ VHCSAG GRTGVL T++ + LT+ P +
Sbjct: 682 GVPDDSSDFLEFVNYVRSLRVDS-EPVLVHCSAGIGRTGVLVTME--TAMCLTERNLPIY 738
Query: 152 SLFDVVLKMRKQRPAAVQTEEQYRFLYHTVAQMF 185
L D+V KMR QR VQT QY+F+ + +++
Sbjct: 739 PL-DIVRKMRDQRAMMVQTSSQYKFVCEAILRVY 771
>gi|223941879 protein tyrosine phosphatase, non-receptor type 3
isoform 2 [Homo sapiens]
Length = 868
Score = 90.5 bits (223), Expect = 2e-18
Identities = 56/154 (36%), Positives = 78/154 (50%), Gaps = 5/154 (3%)
Query: 33 RCERYWAQEQEPLQTGLFCITLIKEKWLNEDIMLRTLKVTFQK-ESRSVYQLQYMSWPDR 91
+C +YW + + G F I E + L Q E +V LQY++WPD
Sbjct: 708 KCHQYWPDPPDVMNHGGFHIQCQSEDCTIAYVSREMLVTNTQTGEEHTVTHLQYVAWPDH 767
Query: 92 GVPSSPDHMLAMVEEARRLQGSGPEPLCVHCSAGCGRTGVLCTVDYVRQLLLTQMIPPDF 151
GVP L V R L+ EP+ VHCSAG GRTGVL T++ + LT+ P +
Sbjct: 768 GVPDDSSDFLEFVNYVRSLRVDS-EPVLVHCSAGIGRTGVLVTME--TAMCLTERNLPIY 824
Query: 152 SLFDVVLKMRKQRPAAVQTEEQYRFLYHTVAQMF 185
L D+V KMR QR VQT QY+F+ + +++
Sbjct: 825 PL-DIVRKMRDQRAMMVQTSSQYKFVCEAILRVY 857
>gi|223941876 protein tyrosine phosphatase, non-receptor type 3
isoform 1 [Homo sapiens]
Length = 913
Score = 90.5 bits (223), Expect = 2e-18
Identities = 56/154 (36%), Positives = 78/154 (50%), Gaps = 5/154 (3%)
Query: 33 RCERYWAQEQEPLQTGLFCITLIKEKWLNEDIMLRTLKVTFQK-ESRSVYQLQYMSWPDR 91
+C +YW + + G F I E + L Q E +V LQY++WPD
Sbjct: 753 KCHQYWPDPPDVMNHGGFHIQCQSEDCTIAYVSREMLVTNTQTGEEHTVTHLQYVAWPDH 812
Query: 92 GVPSSPDHMLAMVEEARRLQGSGPEPLCVHCSAGCGRTGVLCTVDYVRQLLLTQMIPPDF 151
GVP L V R L+ EP+ VHCSAG GRTGVL T++ + LT+ P +
Sbjct: 813 GVPDDSSDFLEFVNYVRSLRVDS-EPVLVHCSAGIGRTGVLVTME--TAMCLTERNLPIY 869
Query: 152 SLFDVVLKMRKQRPAAVQTEEQYRFLYHTVAQMF 185
L D+V KMR QR VQT QY+F+ + +++
Sbjct: 870 PL-DIVRKMRDQRAMMVQTSSQYKFVCEAILRVY 902
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.134 0.410
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,514,108
Number of Sequences: 37866
Number of extensions: 939117
Number of successful extensions: 4514
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 121
Number of HSP's successfully gapped in prelim test: 217
Number of HSP's that attempted gapping in prelim test: 3871
Number of HSP's gapped (non-prelim): 601
length of query: 353
length of database: 18,247,518
effective HSP length: 103
effective length of query: 250
effective length of database: 14,347,320
effective search space: 3586830000
effective search space used: 3586830000
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.