Search of human proteins with 209915553

Search of human proteins with 209915553

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|209915553 cyclin D3 isoform 3 [Homo sapiens]
         (220 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|209915553 cyclin D3 isoform 3 [Homo sapiens]                       443   e-125
gi|4502619 cyclin D3 isoform 2 [Homo sapiens]                         348   2e-96
gi|209862835 cyclin D3 isoform 1 [Homo sapiens]                       307   4e-84
gi|209915556 cyclin D3 isoform 4 [Homo sapiens]                       189   1e-48
gi|4502617 cyclin D2 [Homo sapiens]                                   166   1e-41
gi|16950655 cyclin D1 [Homo sapiens]                                  124   5e-29
gi|197276674 cyclin J isoform 1 [Homo sapiens]                         42   4e-04
gi|94680985 cyclin J-like [Homo sapiens]                               40   0.002
gi|38524591 intramembrane protease 5 [Homo sapiens]                    37   0.010
gi|17318565 cyclin E2 [Homo sapiens]                                   35   0.050
gi|91208418 transcription elongation regulator 1 isoform 2 [Homo...    32   0.56 
gi|21327715 transcription elongation regulator 1 isoform 1 [Homo...    32   0.56 
gi|58331187 T-cell lymphoma invasion and metastasis 2 isoform a ...    31   0.95 
gi|151301127 dynein, axonemal, heavy chain 7 [Homo sapiens]            30   1.2  
gi|5729982 DNA-directed DNA polymerase eta [Homo sapiens]              30   1.6  
gi|153791755 cyclin domain containing [Homo sapiens]                   30   1.6  
gi|148276981 transmembrane protein 184A [Homo sapiens]                 30   1.6  
gi|24430210 interleukin 17 receptor E isoform 1 [Homo sapiens]         30   1.6  
gi|24430206 interleukin 17 receptor E isoform 2 [Homo sapiens]         30   1.6  
gi|24430204 interleukin 17 receptor E isoform 1 [Homo sapiens]         30   1.6  
gi|48255891 protein kinase C substrate 80K-H isoform 2 [Homo sap...    30   2.1  
gi|48255889 protein kinase C substrate 80K-H isoform 1 [Homo sap...    30   2.1  
gi|66932902 SREBF chaperone protein [Homo sapiens]                     29   2.8  
gi|149944526 additional sex combs like 3 [Homo sapiens]                29   2.8  
gi|239757751 PREDICTED: hypothetical protein [Homo sapiens]            29   3.6  
gi|239752261 PREDICTED: hypothetical protein XP_002348184 [Homo ...    29   3.6  
gi|239746774 PREDICTED: hypothetical protein XP_002343845 [Homo ...    29   3.6  
gi|194097398 protein tyrosine phosphatase, receptor type, G prec...    29   3.6  
gi|28373194 adhesion regulating molecule 1 precursor [Homo sapiens]    29   3.6  
gi|28373192 adhesion regulating molecule 1 precursor [Homo sapiens]    29   3.6  

>gi|209915553 cyclin D3 isoform 3 [Homo sapiens]
          Length = 220

 Score =  443 bits (1139), Expect = e-125
 Identities = 220/220 (100%), Positives = 220/220 (100%)

Query: 1   MELLCCEGTRHAPRAGPDPRLLGDQRVLQSLLRLEERYVPRASYFQCVQREIKPHMRKML 60
           MELLCCEGTRHAPRAGPDPRLLGDQRVLQSLLRLEERYVPRASYFQCVQREIKPHMRKML
Sbjct: 1   MELLCCEGTRHAPRAGPDPRLLGDQRVLQSLLRLEERYVPRASYFQCVQREIKPHMRKML 60

Query: 61  AYWMLEDWEVLVLGKLKWDLAAVIAHDFLAFILHRLSLPRDRQALVKKHAQTFLALCATD 120
           AYWMLEDWEVLVLGKLKWDLAAVIAHDFLAFILHRLSLPRDRQALVKKHAQTFLALCATD
Sbjct: 61  AYWMLEDWEVLVLGKLKWDLAAVIAHDFLAFILHRLSLPRDRQALVKKHAQTFLALCATD 120

Query: 121 YTFAMYPPSMIATGSIGAAVQGLGACSMSGDELTELLAGITGTEVDCLRACQEQIEAALR 180
           YTFAMYPPSMIATGSIGAAVQGLGACSMSGDELTELLAGITGTEVDCLRACQEQIEAALR
Sbjct: 121 YTFAMYPPSMIATGSIGAAVQGLGACSMSGDELTELLAGITGTEVDCLRACQEQIEAALR 180

Query: 181 ESLREASQTSSSPAPKAPRGSSSQGPSQTSTPTDVTAIHL 220
           ESLREASQTSSSPAPKAPRGSSSQGPSQTSTPTDVTAIHL
Sbjct: 181 ESLREASQTSSSPAPKAPRGSSSQGPSQTSTPTDVTAIHL 220


>gi|4502619 cyclin D3 isoform 2 [Homo sapiens]
          Length = 292

 Score =  348 bits (894), Expect = 2e-96
 Identities = 199/292 (68%), Positives = 201/292 (68%), Gaps = 72/292 (24%)

Query: 1   MELLCCEGTRHAPRAGPDPRLLGDQRVLQSLL---------------------------- 32
           MELLCCEGTRHAPRAGPDPRLLGDQRVLQSLL                            
Sbjct: 1   MELLCCEGTRHAPRAGPDPRLLGDQRVLQSLLRLEERYVPRASYFQCVQREIKPHMRKML 60

Query: 33  -----------RLEERYVPRAS-----YFQCVQ--------------------REIKPHM 56
                      R EE   P A      Y  CV                     RE  P  
Sbjct: 61  AYWMLEVCEEQRCEEEVFPLAMNYLDRYLSCVPTRKAQLQLLGAVCMLLASKLRETTPLT 120

Query: 57  RKMLAYW--------MLEDWEVLVLGKLKWDLAAVIAHDFLAFILHRLSLPRDRQALVKK 108
            + L  +         L DWEVLVLGKLKWDLAAVIAHDFLAFILHRLSLPRDRQALVKK
Sbjct: 121 IEKLCIYTDHAVSPRQLRDWEVLVLGKLKWDLAAVIAHDFLAFILHRLSLPRDRQALVKK 180

Query: 109 HAQTFLALCATDYTFAMYPPSMIATGSIGAAVQGLGACSMSGDELTELLAGITGTEVDCL 168
           HAQTFLALCATDYTFAMYPPSMIATGSIGAAVQGLGACSMSGDELTELLAGITGTEVDCL
Sbjct: 181 HAQTFLALCATDYTFAMYPPSMIATGSIGAAVQGLGACSMSGDELTELLAGITGTEVDCL 240

Query: 169 RACQEQIEAALRESLREASQTSSSPAPKAPRGSSSQGPSQTSTPTDVTAIHL 220
           RACQEQIEAALRESLREASQTSSSPAPKAPRGSSSQGPSQTSTPTDVTAIHL
Sbjct: 241 RACQEQIEAALRESLREASQTSSSPAPKAPRGSSSQGPSQTSTPTDVTAIHL 292


>gi|209862835 cyclin D3 isoform 1 [Homo sapiens]
          Length = 211

 Score =  307 bits (787), Expect = 4e-84
 Identities = 155/156 (99%), Positives = 155/156 (99%)

Query: 65  LEDWEVLVLGKLKWDLAAVIAHDFLAFILHRLSLPRDRQALVKKHAQTFLALCATDYTFA 124
           L DWEVLVLGKLKWDLAAVIAHDFLAFILHRLSLPRDRQALVKKHAQTFLALCATDYTFA
Sbjct: 56  LRDWEVLVLGKLKWDLAAVIAHDFLAFILHRLSLPRDRQALVKKHAQTFLALCATDYTFA 115

Query: 125 MYPPSMIATGSIGAAVQGLGACSMSGDELTELLAGITGTEVDCLRACQEQIEAALRESLR 184
           MYPPSMIATGSIGAAVQGLGACSMSGDELTELLAGITGTEVDCLRACQEQIEAALRESLR
Sbjct: 116 MYPPSMIATGSIGAAVQGLGACSMSGDELTELLAGITGTEVDCLRACQEQIEAALRESLR 175

Query: 185 EASQTSSSPAPKAPRGSSSQGPSQTSTPTDVTAIHL 220
           EASQTSSSPAPKAPRGSSSQGPSQTSTPTDVTAIHL
Sbjct: 176 EASQTSSSPAPKAPRGSSSQGPSQTSTPTDVTAIHL 211


>gi|209915556 cyclin D3 isoform 4 [Homo sapiens]
          Length = 96

 Score =  189 bits (481), Expect = 1e-48
 Identities = 96/96 (100%), Positives = 96/96 (100%)

Query: 125 MYPPSMIATGSIGAAVQGLGACSMSGDELTELLAGITGTEVDCLRACQEQIEAALRESLR 184
           MYPPSMIATGSIGAAVQGLGACSMSGDELTELLAGITGTEVDCLRACQEQIEAALRESLR
Sbjct: 1   MYPPSMIATGSIGAAVQGLGACSMSGDELTELLAGITGTEVDCLRACQEQIEAALRESLR 60

Query: 185 EASQTSSSPAPKAPRGSSSQGPSQTSTPTDVTAIHL 220
           EASQTSSSPAPKAPRGSSSQGPSQTSTPTDVTAIHL
Sbjct: 61  EASQTSSSPAPKAPRGSSSQGPSQTSTPTDVTAIHL 96


>gi|4502617 cyclin D2 [Homo sapiens]
          Length = 289

 Score =  166 bits (420), Expect = 1e-41
 Identities = 91/161 (56%), Positives = 113/161 (70%), Gaps = 12/161 (7%)

Query: 65  LEDWEVLVLGKLKWDLAAVIAHDFLAFILHRLSLPRDRQALVKKHAQTFLALCATDYTFA 124
           L +WE++VLGKLKW+LAAV  HDF+  IL +L   R++ +L++KHAQTF+ALCATD+ FA
Sbjct: 136 LLEWELVVLGKLKWNLAAVTPHDFIEHILRKLPQQREKLSLIRKHAQTFIALCATDFKFA 195

Query: 125 MYPPSMIATGSIGAAVQGL----GACSMSGDELTELLAGITGTEVDCLRACQEQIEAALR 180
           MYPPSMIATGS+GAA+ GL       S++ D LTELLA IT T+VDCL+ACQEQIEA L 
Sbjct: 196 MYPPSMIATGSVGAAICGLQQDEEVSSLTCDALTELLAKITNTDVDCLKACQEQIEAVLL 255

Query: 181 ESLREASQTSSSPAPKAPRGSSSQGP-SQTSTPTDVTAIHL 220
            SL++  Q           GS S+    Q STPTDV  I L
Sbjct: 256 NSLQQYRQDQRD-------GSKSEDELDQASTPTDVRDIDL 289



 Score = 77.4 bits (189), Expect = 9e-15
 Identities = 39/66 (59%), Positives = 50/66 (75%), Gaps = 1/66 (1%)

Query: 1  MELLCCEGTRHAPRAGPDPRLLGDQRVLQSLLRLEERYVPRASYFQCVQREIKPHMRKML 60
          MELLC E      RA  D  LL D RVLQ+LL +EERY+P+ SYF+CVQ++I+P+MR+M+
Sbjct: 1  MELLCHE-VDPVRRAVRDRNLLRDDRVLQNLLTIEERYLPQCSYFKCVQKDIQPYMRRMV 59

Query: 61 AYWMLE 66
          A WMLE
Sbjct: 60 ATWMLE 65


>gi|16950655 cyclin D1 [Homo sapiens]
          Length = 295

 Score =  124 bits (312), Expect = 5e-29
 Identities = 68/156 (43%), Positives = 93/156 (59%), Gaps = 5/156 (3%)

Query: 69  EVLVLGKLKWDLAAVIAHDFLAFILHRLSLPRDRQALVKKHAQTFLALCATDYTFAMYPP 128
           E+L++ KLKW+LAA+  HDF+   L ++    + + +++KHAQTF+ALCATD  F   PP
Sbjct: 141 ELLLVNKLKWNLAAMTPHDFIEHFLSKMPEAEENKQIIRKHAQTFVALCATDVKFISNPP 200

Query: 129 SMIATGSIGAAVQGLGACS----MSGDELTELLAGITGTEVDCLRACQEQIEAALRESLR 184
           SM+A GS+ AAVQGL   S    +S   LT  L+ +   + DCLRACQEQIEA L  SLR
Sbjct: 201 SMVAAGSVVAAVQGLNLRSPNNFLSYYRLTRFLSRVIKCDPDCLRACQEQIEALLESSLR 260

Query: 185 EASQTSSSPAPKAPRGSSSQGPSQTSTPTDVTAIHL 220
           +A Q +  P          +      TPTDV  + +
Sbjct: 261 QAQQ-NMDPKAAEEEEEEEEEVDLACTPTDVRDVDI 295



 Score = 68.2 bits (165), Expect = 5e-12
 Identities = 35/65 (53%), Positives = 45/65 (69%), Gaps = 2/65 (3%)

Query: 2  ELLCCEGTRHAPRAGPDPRLLGDQRVLQSLLRLEERYVPRASYFQCVQREIKPHMRKMLA 61
          +LLCCE      RA PD  LL D RVL+++L+ EE   P  SYF+CVQ+E+ P MRK++A
Sbjct: 4  QLLCCE-VETIRRAYPDANLLND-RVLRAMLKAEETCAPSVSYFKCVQKEVLPSMRKIVA 61

Query: 62 YWMLE 66
           WMLE
Sbjct: 62 TWMLE 66


>gi|197276674 cyclin J isoform 1 [Homo sapiens]
          Length = 383

 Score = 42.0 bits (97), Expect = 4e-04
 Identities = 41/170 (24%), Positives = 67/170 (39%), Gaps = 16/170 (9%)

Query: 55  HMRKMLAYWMLEDWEVLVLGKLKWDLAAVIAHDFLAFILHRLSLPRD------------R 102
           +M  +L    L   E+L+L   +W+L    A  F+ + L       D             
Sbjct: 117 NMNLVLTKQNLLHMELLLLETFQWNLCLPTAAHFIEYYLSEAVHETDLHDGWPMICLEKT 176

Query: 103 QALVKKHAQTFLALCATDYTFAMYPPSMIATGSIGAAVQGLGACSMSGDELTELLAGITG 162
           +  + K+A  FL +   DY F  Y PS++A   + ++   L         L  L    T 
Sbjct: 177 KLYMAKYADYFLEVSLQDYAFLNYAPSLVAAACVASSRIILRLSPTWPTRLHRL----TA 232

Query: 163 TEVDCLRACQEQIEAALRESLREASQTSSSPAPKAPRGSSSQGPSQTSTP 212
              D L  C E++  A    ++EA++      P++ + S  Q  SQ S P
Sbjct: 233 YSWDFLVQCIERLLIAHDNDVKEANKQRGQAGPQSAQLSVFQTASQPSRP 282


>gi|94680985 cyclin J-like [Homo sapiens]
          Length = 435

 Score = 40.0 bits (92), Expect = 0.002
 Identities = 47/206 (22%), Positives = 79/206 (38%), Gaps = 22/206 (10%)

Query: 8   GTRHAPRAGPDPRLLGDQRVLQSLLRLEER--YVPRASYFQCVQREIKPHMRKMLAYWML 65
           G+ ++P + P P     Q V ++  + E+R  +VP+    Q     I       L    L
Sbjct: 119 GSSNSPASAPHPPPTPPQ-VAETTGKFEDREDHVPKLE--QINSTRILSSQNFTLTKKEL 175

Query: 66  EDWEVLVLGKLKWDLAAVIAHDFLAFIL--------HRL-----SLPRDRQALVKKHAQT 112
              E+L+L    W+L       FL + L        H       + PR  +  +K++A  
Sbjct: 176 LSTELLLLEAFSWNLCLPTPAHFLDYYLLASVSQKDHHCHTWPTTCPRKTKECLKEYAHY 235

Query: 113 FLALCATDYTFAMYPPSMIATGSIGAAVQGLGACSMSGDELTELLAGITGTEVDCLRACQ 172
           FL +   D+ F  + PS++A   +GA+      C       T  L  I+   ++ L  C 
Sbjct: 236 FLEVTLQDHIFYKFQPSVVAAACVGAS----RICLQLSPYWTRDLQRISSYSLEHLSTCI 291

Query: 173 EQIEAALRESLREASQTSSSPAPKAP 198
           E +       L++A    S      P
Sbjct: 292 EILLVVYDNVLKDAVAVKSQALAMVP 317


>gi|38524591 intramembrane protease 5 [Homo sapiens]
          Length = 684

 Score = 37.4 bits (85), Expect = 0.010
 Identities = 26/96 (27%), Positives = 36/96 (37%), Gaps = 5/96 (5%)

Query: 78  WDLAAVIAHDFLAFILHRLSLPRDRQALVKKHAQTFLALCATDYTFAMYPPSMIATGSIG 137
           W L   +   +  F+LHR+ LP      +K  +   LAL A D  F    P    TG   
Sbjct: 349 WLLQDTLGISYCLFVLHRVRLPT-----LKNCSSFLLALLAFDVFFVFVTPFFTKTGESI 403

Query: 138 AAVQGLGACSMSGDELTELLAGITGTEVDCLRACQE 173
            A   LG    S  E   ++  +    V  L  C +
Sbjct: 404 MAQVALGPAESSSHERLPMVLKVPRLRVSALTLCSQ 439


>gi|17318565 cyclin E2 [Homo sapiens]
          Length = 404

 Score = 35.0 bits (79), Expect = 0.050
 Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 1/69 (1%)

Query: 13  PRAGPDPRLLGDQRVLQSLLRLEERYVPRASYFQCVQREIKPHMRKMLAYWMLEDWEVLV 72
           P   PD      + V  ++L+ E RYV    +F+ +  +++P MR +L  W+LE  EV  
Sbjct: 99  PSPLPDLSWGCSKEVWLNMLKKESRYV-HDKHFEVLHSDLEPQMRSILLDWLLEVCEVYT 157

Query: 73  LGKLKWDLA 81
           L +  + LA
Sbjct: 158 LHRETFYLA 166


>gi|91208418 transcription elongation regulator 1 isoform 2 [Homo
           sapiens]
          Length = 1077

 Score = 31.6 bits (70), Expect = 0.56
 Identities = 18/49 (36%), Positives = 31/49 (63%), Gaps = 2/49 (4%)

Query: 172 QEQIEAALR-ESLREASQTSSSPAPKAPRGSSSQGPSQ-TSTPTDVTAI 218
           Q Q++A ++ +++  ++ T+SSPAP     +SS  PS  TST T  T++
Sbjct: 244 QAQVQAQVQAQAVGASTPTTSSPAPAVSTSTSSSTPSSTTSTTTTATSV 292


>gi|21327715 transcription elongation regulator 1 isoform 1 [Homo
           sapiens]
          Length = 1098

 Score = 31.6 bits (70), Expect = 0.56
 Identities = 18/49 (36%), Positives = 31/49 (63%), Gaps = 2/49 (4%)

Query: 172 QEQIEAALR-ESLREASQTSSSPAPKAPRGSSSQGPSQ-TSTPTDVTAI 218
           Q Q++A ++ +++  ++ T+SSPAP     +SS  PS  TST T  T++
Sbjct: 244 QAQVQAQVQAQAVGASTPTTSSPAPAVSTSTSSSTPSSTTSTTTTATSV 292


>gi|58331187 T-cell lymphoma invasion and metastasis 2 isoform a
           [Homo sapiens]
          Length = 1701

 Score = 30.8 bits (68), Expect = 0.95
 Identities = 21/45 (46%), Positives = 27/45 (60%), Gaps = 4/45 (8%)

Query: 171 CQEQIEAALRESLREASQTSSSPAPKAPRGSSSQG-PSQTSTPTD 214
           C E ++  LR S   AS+TS  P P+A RGSS+   PS   +PTD
Sbjct: 191 CSEPVQL-LRYSPTLASETS--PVPEARRGSSADSLPSHRPSPTD 232


>gi|151301127 dynein, axonemal, heavy chain 7 [Homo sapiens]
          Length = 4024

 Score = 30.4 bits (67), Expect = 1.2
 Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 1/40 (2%)

Query: 16   GPDPRLLGDQRVLQSLLRLEERYVPRASYFQCVQREIKPH 55
            GP  RLLGD R LQSL   ++  +P A Y   +++   P+
Sbjct: 2737 GPAKRLLGDMRFLQSLHEYDKDNIPPA-YMNIIRKNYIPN 2775


>gi|5729982 DNA-directed DNA polymerase eta [Homo sapiens]
          Length = 713

 Score = 30.0 bits (66), Expect = 1.6
 Identities = 29/107 (27%), Positives = 45/107 (42%), Gaps = 5/107 (4%)

Query: 112 TFLALCATDYTFAMYPPSMIATGSIGAAVQGLGACSMSGDELTELLAGITGTEVDCLRAC 171
           T L LCAT ++ +    S   T  + +    L    ++  E     +G   T        
Sbjct: 420 TMLFLCATKFSASAPSSSTDITSFLSSDPSSLPKVPVTSSEAKTQGSGPAVTATKKATTS 479

Query: 172 QEQI--EAALRESLREASQTSSSPAPKAPRGSSSQGPS---QTSTPT 213
            E    +AA R+ ++EAS +S +   +AP  +S   PS   QTS  T
Sbjct: 480 LESFFQKAAERQKVKEASLSSLTAPTQAPMSNSPSKPSLPFQTSQST 526


>gi|153791755 cyclin domain containing [Homo sapiens]
          Length = 350

 Score = 30.0 bits (66), Expect = 1.6
 Identities = 31/102 (30%), Positives = 41/102 (40%), Gaps = 20/102 (19%)

Query: 47  CVQREIKPHMRKML--------AYWMLEDWEVLVLGKLKWDLAAVIAHDFLAFILH---- 94
           C Q E+ P   K L        +   L + E +VL KL + L A     FL    H    
Sbjct: 187 CKQVEVHPPRVKQLLALCCGAFSRQQLCNLECIVLHKLHFTLGAPTISFFLEHFTHARVE 246

Query: 95  ----RLSLPRDRQALVKKHAQTFLALCATDYTFAMYPPSMIA 132
                 S   + QAL +  A+  LA    DY F  Y PS++A
Sbjct: 247 AGQAEASEALEAQALARGVAELSLA----DYAFTSYSPSLLA 284


>gi|148276981 transmembrane protein 184A [Homo sapiens]
          Length = 413

 Score = 30.0 bits (66), Expect = 1.6
 Identities = 16/36 (44%), Positives = 21/36 (58%), Gaps = 2/36 (5%)

Query: 186 ASQTSSSPAPKAPRGSSSQGPSQTSTPTDVT--AIH 219
           A +  +SPAP AP  S S G  +T +P D+   AIH
Sbjct: 330 AEKKENSPAPPAPMQSISSGIRETVSPQDIVQDAIH 365


>gi|24430210 interleukin 17 receptor E isoform 1 [Homo sapiens]
          Length = 667

 Score = 30.0 bits (66), Expect = 1.6
 Identities = 22/67 (32%), Positives = 31/67 (46%), Gaps = 6/67 (8%)

Query: 3   LLCCEGTRHAPRAGPDPRLLGDQRVLQSLLRLEERYVPRASYFQ--CVQREIKPHMRKML 60
           LL   G    P +GPDPR       L +LL    R +   +YF   C + +I P +R + 
Sbjct: 556 LLLWSGADLRPVSGPDPR----AAPLLALLHAAPRPLLLLAYFSRLCAKGDIPPPLRALP 611

Query: 61  AYWMLED 67
            Y +L D
Sbjct: 612 RYRLLRD 618


>gi|24430206 interleukin 17 receptor E isoform 2 [Homo sapiens]
          Length = 551

 Score = 30.0 bits (66), Expect = 1.6
 Identities = 22/67 (32%), Positives = 31/67 (46%), Gaps = 6/67 (8%)

Query: 3   LLCCEGTRHAPRAGPDPRLLGDQRVLQSLLRLEERYVPRASYFQ--CVQREIKPHMRKML 60
           LL   G    P +GPDPR       L +LL    R +   +YF   C + +I P +R + 
Sbjct: 440 LLLWSGADLRPVSGPDPR----AAPLLALLHAAPRPLLLLAYFSRLCAKGDIPPPLRALP 495

Query: 61  AYWMLED 67
            Y +L D
Sbjct: 496 RYRLLRD 502


>gi|24430204 interleukin 17 receptor E isoform 1 [Homo sapiens]
          Length = 667

 Score = 30.0 bits (66), Expect = 1.6
 Identities = 22/67 (32%), Positives = 31/67 (46%), Gaps = 6/67 (8%)

Query: 3   LLCCEGTRHAPRAGPDPRLLGDQRVLQSLLRLEERYVPRASYFQ--CVQREIKPHMRKML 60
           LL   G    P +GPDPR       L +LL    R +   +YF   C + +I P +R + 
Sbjct: 556 LLLWSGADLRPVSGPDPR----AAPLLALLHAAPRPLLLLAYFSRLCAKGDIPPPLRALP 611

Query: 61  AYWMLED 67
            Y +L D
Sbjct: 612 RYRLLRD 618


>gi|48255891 protein kinase C substrate 80K-H isoform 2 [Homo
           sapiens]
          Length = 525

 Score = 29.6 bits (65), Expect = 2.1
 Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 5/73 (6%)

Query: 144 GACSMSGDELTELLAGITGTEVDCLRACQEQIEAALRESLREASQTSSSPAPKAP--RGS 201
           G  ++S  E   LL+G T T+        +++ AA+R+  R  +  +  PAP AP     
Sbjct: 244 GDGALSEAEAQALLSGDTQTDATSF---YDRVWAAIRDKYRSEALPTDLPAPSAPDLTEP 300

Query: 202 SSQGPSQTSTPTD 214
             + P   S+PT+
Sbjct: 301 KEEQPPVPSSPTE 313


>gi|48255889 protein kinase C substrate 80K-H isoform 1 [Homo
           sapiens]
          Length = 528

 Score = 29.6 bits (65), Expect = 2.1
 Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 5/73 (6%)

Query: 144 GACSMSGDELTELLAGITGTEVDCLRACQEQIEAALRESLREASQTSSSPAPKAP--RGS 201
           G  ++S  E   LL+G T T+        +++ AA+R+  R  +  +  PAP AP     
Sbjct: 244 GDGALSEAEAQALLSGDTQTDATSF---YDRVWAAIRDKYRSEALPTDLPAPSAPDLTEP 300

Query: 202 SSQGPSQTSTPTD 214
             + P   S+PT+
Sbjct: 301 KEEQPPVPSSPTE 313


>gi|66932902 SREBF chaperone protein [Homo sapiens]
          Length = 1279

 Score = 29.3 bits (64), Expect = 2.8
 Identities = 15/34 (44%), Positives = 17/34 (50%)

Query: 10  RHAPRAGPDPRLLGDQRVLQSLLRLEERYVPRAS 43
           RH PR  P P L GDQ  L  L+       PR+S
Sbjct: 855 RHRPRGPPPPSLFGDQPDLTCLIDTNFSAQPRSS 888


>gi|149944526 additional sex combs like 3 [Homo sapiens]
          Length = 2248

 Score = 29.3 bits (64), Expect = 2.8
 Identities = 23/77 (29%), Positives = 35/77 (45%), Gaps = 6/77 (7%)

Query: 135  SIGAAVQGLGACSMSGDELTELLAGITGTEVDCLRACQEQIEAALRESLREASQTSSSPA 194
            S+ +A   + AC++S      +L  I GT+  C+    + IE+    +  E S  SSS  
Sbjct: 1266 SVDSANTTISACNIS------MLKTIQGTDTPCIAIIPKCIESTPISATTEGSSISSSMD 1319

Query: 195  PKAPRGSSSQGPSQTST 211
             K    SSS   +  ST
Sbjct: 1320 DKQLLISSSSASNLVST 1336


>gi|239757751 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 327

 Score = 28.9 bits (63), Expect = 3.6
 Identities = 15/45 (33%), Positives = 21/45 (46%), Gaps = 1/45 (2%)

Query: 174 QIEAALRESL-REASQTSSSPAPKAPRGSSSQGPSQTSTPTDVTA 217
           Q+E    E + R    T   P P  PRG + + P + +TP D  A
Sbjct: 148 QVEGQEEEGVVRLLEPTPQPPPPSPPRGLADRAPRRLNTPPDTLA 192


>gi|239752261 PREDICTED: hypothetical protein XP_002348184 [Homo
           sapiens]
          Length = 264

 Score = 28.9 bits (63), Expect = 3.6
 Identities = 15/45 (33%), Positives = 21/45 (46%), Gaps = 1/45 (2%)

Query: 174 QIEAALRESL-REASQTSSSPAPKAPRGSSSQGPSQTSTPTDVTA 217
           Q+E    E + R    T   P P  PRG + + P + +TP D  A
Sbjct: 85  QVEGQEEEGVVRLLEPTPQPPPPSPPRGLADRAPRRLNTPPDTLA 129


>gi|239746774 PREDICTED: hypothetical protein XP_002343845 [Homo
           sapiens]
          Length = 264

 Score = 28.9 bits (63), Expect = 3.6
 Identities = 15/45 (33%), Positives = 21/45 (46%), Gaps = 1/45 (2%)

Query: 174 QIEAALRESL-REASQTSSSPAPKAPRGSSSQGPSQTSTPTDVTA 217
           Q+E    E + R    T   P P  PRG + + P + +TP D  A
Sbjct: 85  QVEGQEEEGVVRLLEPTPQPPPPSPPRGLADRAPRRLNTPPDTLA 129


>gi|194097398 protein tyrosine phosphatase, receptor type, G
           precursor [Homo sapiens]
          Length = 1445

 Score = 28.9 bits (63), Expect = 3.6
 Identities = 22/91 (24%), Positives = 36/91 (39%), Gaps = 8/91 (8%)

Query: 134 GSIGAAVQGLGACSMSGDELTELLAGITGTEVDCLRACQEQIEAALRESLREASQTSSSP 193
           G       G G      DE +E   G    E D  +  +++ ++ +  +  E +QT  SP
Sbjct: 566 GDSSPTKDGEGTEEGEKDEKSESEDGEREHEEDGEKDSEKKEKSGVTHAAEERNQTEPSP 625

Query: 194 APKAPRGSSSQG--------PSQTSTPTDVT 216
            P +P  ++  G           T+ PTD T
Sbjct: 626 TPSSPNRTAEGGHQTIPGHEQDHTAVPTDQT 656


>gi|28373194 adhesion regulating molecule 1 precursor [Homo sapiens]
          Length = 407

 Score = 28.9 bits (63), Expect = 3.6
 Identities = 23/66 (34%), Positives = 32/66 (48%), Gaps = 4/66 (6%)

Query: 142 GLGACSMSGDELTELLAGITGTEVDCLRACQEQIEAALRESLREASQTSSSPAPKAPRGS 201
           GLGA  ++G  L  LL G +G       +      AA+  S    S T ++PAP AP  +
Sbjct: 182 GLGA--LTGPGLASLL-GSSGPPGSSSSSSSRSQSAAVTPS-STTSSTRATPAPSAPAAA 237

Query: 202 SSQGPS 207
           S+  PS
Sbjct: 238 SATSPS 243


>gi|28373192 adhesion regulating molecule 1 precursor [Homo sapiens]
          Length = 407

 Score = 28.9 bits (63), Expect = 3.6
 Identities = 23/66 (34%), Positives = 32/66 (48%), Gaps = 4/66 (6%)

Query: 142 GLGACSMSGDELTELLAGITGTEVDCLRACQEQIEAALRESLREASQTSSSPAPKAPRGS 201
           GLGA  ++G  L  LL G +G       +      AA+  S    S T ++PAP AP  +
Sbjct: 182 GLGA--LTGPGLASLL-GSSGPPGSSSSSSSRSQSAAVTPS-STTSSTRATPAPSAPAAA 237

Query: 202 SSQGPS 207
           S+  PS
Sbjct: 238 SATSPS 243


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.321    0.133    0.402 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,697,839
Number of Sequences: 37866
Number of extensions: 348199
Number of successful extensions: 2249
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 23
Number of HSP's that attempted gapping in prelim test: 2182
Number of HSP's gapped (non-prelim): 84
length of query: 220
length of database: 18,247,518
effective HSP length: 98
effective length of query: 122
effective length of database: 14,536,650
effective search space: 1773471300
effective search space used: 1773471300
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.