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Search of human proteins with 205277427
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|205277427 hypothetical protein LOC57700 isoform a [Homo
sapiens]
(765 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|205277427 hypothetical protein LOC57700 isoform a [Homo sapiens] 1546 0.0
gi|205277429 hypothetical protein LOC57700 isoform b [Homo sapiens] 1479 0.0
gi|89337270 retinoic acid induced 16 [Homo sapiens] 709 0.0
gi|149393138 hypothetical protein LOC84067 isoform 2 [Homo sapiens] 74 5e-13
gi|149393140 hypothetical protein LOC84067 isoform 1 [Homo sapiens] 74 5e-13
gi|158341646 hypothetical protein LOC729830 [Homo sapiens] 63 1e-09
gi|58743365 ring finger protein 157 [Homo sapiens] 35 0.20
gi|50843948 Rho GTPase activating protein 10 [Homo sapiens] 35 0.26
gi|212549782 caspase 8 associated protein 2 [Homo sapiens] 34 0.45
gi|6912288 caspase 8 associated protein 2 [Homo sapiens] 34 0.45
gi|212549532 caspase 8 associated protein 2 [Homo sapiens] 34 0.45
gi|46240864 sperm associated antigen 17 [Homo sapiens] 33 0.76
gi|50083291 amyloid beta A4 precursor protein-binding, family B,... 32 1.7
gi|187936949 solute carrier family 39 (zinc transporter), member... 32 1.7
gi|55741750 solute carrier family 39 (zinc transporter), member ... 32 1.7
gi|21264343 scaffold attachment factor B [Homo sapiens] 32 2.2
gi|22027648 lipin 1 [Homo sapiens] 30 6.4
gi|24307991 p53-associated parkin-like cytoplasmic protein [Homo... 30 6.4
gi|239745140 PREDICTED: similar to hect domain and RLD 2 [Homo s... 30 8.4
gi|10092639 cysteine-rich motor neuron 1 [Homo sapiens] 30 8.4
>gi|205277427 hypothetical protein LOC57700 isoform a [Homo sapiens]
Length = 765
Score = 1546 bits (4003), Expect = 0.0
Identities = 765/765 (100%), Positives = 765/765 (100%)
Query: 1 MFSKFTSILQHAVEALAPSLPLQEDFVYHWKAITHYYIETSDDKAPVTDTNIPSHLEQML 60
MFSKFTSILQHAVEALAPSLPLQEDFVYHWKAITHYYIETSDDKAPVTDTNIPSHLEQML
Sbjct: 1 MFSKFTSILQHAVEALAPSLPLQEDFVYHWKAITHYYIETSDDKAPVTDTNIPSHLEQML 60
Query: 61 DILVQEENERESGETGPCMEYLLHHKILETLYTLGKADCPPGMKQQVLVFYTKLLGRIRQ 120
DILVQEENERESGETGPCMEYLLHHKILETLYTLGKADCPPGMKQQVLVFYTKLLGRIRQ
Sbjct: 61 DILVQEENERESGETGPCMEYLLHHKILETLYTLGKADCPPGMKQQVLVFYTKLLGRIRQ 120
Query: 121 PLLPHINVHRPVQKLIRLCGEVLATPTENEEIQFLCIVCAKLKQDPYLVNFFLENKMKSL 180
PLLPHINVHRPVQKLIRLCGEVLATPTENEEIQFLCIVCAKLKQDPYLVNFFLENKMKSL
Sbjct: 121 PLLPHINVHRPVQKLIRLCGEVLATPTENEEIQFLCIVCAKLKQDPYLVNFFLENKMKSL 180
Query: 181 ASKGVPNVISEDTLKGQDSLSTDTGQSRQPEELSGATGMEQTELEDEPPHQMDHLSTSLD 240
ASKGVPNVISEDTLKGQDSLSTDTGQSRQPEELSGATGMEQTELEDEPPHQMDHLSTSLD
Sbjct: 181 ASKGVPNVISEDTLKGQDSLSTDTGQSRQPEELSGATGMEQTELEDEPPHQMDHLSTSLD 240
Query: 241 NLSVTSLPEASVVCPNQDYNLVNSLLNLTRSPDGRIAVKACEGLMLLVSLPEPAAAKCLT 300
NLSVTSLPEASVVCPNQDYNLVNSLLNLTRSPDGRIAVKACEGLMLLVSLPEPAAAKCLT
Sbjct: 241 NLSVTSLPEASVVCPNQDYNLVNSLLNLTRSPDGRIAVKACEGLMLLVSLPEPAAAKCLT 300
Query: 301 QSTCLCELLTDRLASLYKALPQSVDPLDIETVEAINWGLDSYSHKEDASAFPGKRALISF 360
QSTCLCELLTDRLASLYKALPQSVDPLDIETVEAINWGLDSYSHKEDASAFPGKRALISF
Sbjct: 301 QSTCLCELLTDRLASLYKALPQSVDPLDIETVEAINWGLDSYSHKEDASAFPGKRALISF 360
Query: 361 LSWFDYCDQLIKEAQKTAAVALAKAVHERFFIGVMEPQLMQTSEMGILTSTALLHRIVRQ 420
LSWFDYCDQLIKEAQKTAAVALAKAVHERFFIGVMEPQLMQTSEMGILTSTALLHRIVRQ
Sbjct: 361 LSWFDYCDQLIKEAQKTAAVALAKAVHERFFIGVMEPQLMQTSEMGILTSTALLHRIVRQ 420
Query: 421 VTSDVLLQEMVFFILGEQREPETLAEISRHPLRHRLIEHCDHISDEISIMTLRMFEHLLQ 480
VTSDVLLQEMVFFILGEQREPETLAEISRHPLRHRLIEHCDHISDEISIMTLRMFEHLLQ
Sbjct: 421 VTSDVLLQEMVFFILGEQREPETLAEISRHPLRHRLIEHCDHISDEISIMTLRMFEHLLQ 480
Query: 481 KPNEHILYNLVLRNLEERNYTEYKPLCPEDKDVVENGLIAGAVDLEEDPLFTDISPENTL 540
KPNEHILYNLVLRNLEERNYTEYKPLCPEDKDVVENGLIAGAVDLEEDPLFTDISPENTL
Sbjct: 481 KPNEHILYNLVLRNLEERNYTEYKPLCPEDKDVVENGLIAGAVDLEEDPLFTDISPENTL 540
Query: 541 PNQEWLSSSPPATPDHPKNDGKTEVHKIVNSFLCLVPDDAKSSYHVEGTGYDTYLRDAHR 600
PNQEWLSSSPPATPDHPKNDGKTEVHKIVNSFLCLVPDDAKSSYHVEGTGYDTYLRDAHR
Sbjct: 541 PNQEWLSSSPPATPDHPKNDGKTEVHKIVNSFLCLVPDDAKSSYHVEGTGYDTYLRDAHR 600
Query: 601 QFRDYCAICLRWEWPGSPKALEKCNLEAAFFEGHFLKVLFDRMGRILDQPYDVNLQVTSV 660
QFRDYCAICLRWEWPGSPKALEKCNLEAAFFEGHFLKVLFDRMGRILDQPYDVNLQVTSV
Sbjct: 601 QFRDYCAICLRWEWPGSPKALEKCNLEAAFFEGHFLKVLFDRMGRILDQPYDVNLQVTSV 660
Query: 661 LSRLSLFPHPHIHEYLLDPYVNLAPGCRSLFSVIVRVVGDLMLRIQRIQDFTPKLLLVRK 720
LSRLSLFPHPHIHEYLLDPYVNLAPGCRSLFSVIVRVVGDLMLRIQRIQDFTPKLLLVRK
Sbjct: 661 LSRLSLFPHPHIHEYLLDPYVNLAPGCRSLFSVIVRVVGDLMLRIQRIQDFTPKLLLVRK 720
Query: 721 RLLGLEPEGPIIDHITLLEGVIVLEEFCKELAAIAFVKYHASSTP 765
RLLGLEPEGPIIDHITLLEGVIVLEEFCKELAAIAFVKYHASSTP
Sbjct: 721 RLLGLEPEGPIIDHITLLEGVIVLEEFCKELAAIAFVKYHASSTP 765
>gi|205277429 hypothetical protein LOC57700 isoform b [Homo sapiens]
Length = 738
Score = 1479 bits (3829), Expect = 0.0
Identities = 730/731 (99%), Positives = 731/731 (100%)
Query: 1 MFSKFTSILQHAVEALAPSLPLQEDFVYHWKAITHYYIETSDDKAPVTDTNIPSHLEQML 60
MFSKFTSILQHAVEALAPSLPLQEDFVYHWKAITHYYIETSDDKAPVTDTNIPSHLEQML
Sbjct: 1 MFSKFTSILQHAVEALAPSLPLQEDFVYHWKAITHYYIETSDDKAPVTDTNIPSHLEQML 60
Query: 61 DILVQEENERESGETGPCMEYLLHHKILETLYTLGKADCPPGMKQQVLVFYTKLLGRIRQ 120
DILVQEENERESGETGPCMEYLLHHKILETLYTLGKADCPPGMKQQVLVFYTKLLGRIRQ
Sbjct: 61 DILVQEENERESGETGPCMEYLLHHKILETLYTLGKADCPPGMKQQVLVFYTKLLGRIRQ 120
Query: 121 PLLPHINVHRPVQKLIRLCGEVLATPTENEEIQFLCIVCAKLKQDPYLVNFFLENKMKSL 180
PLLPHINVHRPVQKLIRLCGEVLATPTENEEIQFLCIVCAKLKQDPYLVNFFLENKMKSL
Sbjct: 121 PLLPHINVHRPVQKLIRLCGEVLATPTENEEIQFLCIVCAKLKQDPYLVNFFLENKMKSL 180
Query: 181 ASKGVPNVISEDTLKGQDSLSTDTGQSRQPEELSGATGMEQTELEDEPPHQMDHLSTSLD 240
ASKGVPNVISEDTLKGQDSLSTDTGQSRQPEELSGATGMEQTELEDEPPHQMDHLSTSLD
Sbjct: 181 ASKGVPNVISEDTLKGQDSLSTDTGQSRQPEELSGATGMEQTELEDEPPHQMDHLSTSLD 240
Query: 241 NLSVTSLPEASVVCPNQDYNLVNSLLNLTRSPDGRIAVKACEGLMLLVSLPEPAAAKCLT 300
NLSVTSLPEASVVCPNQDYNLVNSLLNLTRSPDGRIAVKACEGLMLLVSLPEPAAAKCLT
Sbjct: 241 NLSVTSLPEASVVCPNQDYNLVNSLLNLTRSPDGRIAVKACEGLMLLVSLPEPAAAKCLT 300
Query: 301 QSTCLCELLTDRLASLYKALPQSVDPLDIETVEAINWGLDSYSHKEDASAFPGKRALISF 360
QSTCLCELLTDRLASLYKALPQSVDPLDIETVEAINWGLDSYSHKEDASAFPGKRALISF
Sbjct: 301 QSTCLCELLTDRLASLYKALPQSVDPLDIETVEAINWGLDSYSHKEDASAFPGKRALISF 360
Query: 361 LSWFDYCDQLIKEAQKTAAVALAKAVHERFFIGVMEPQLMQTSEMGILTSTALLHRIVRQ 420
LSWFDYCDQLIKEAQKTAAVALAKAVHERFFIGVMEPQLMQTSEMGILTSTALLHRIVRQ
Sbjct: 361 LSWFDYCDQLIKEAQKTAAVALAKAVHERFFIGVMEPQLMQTSEMGILTSTALLHRIVRQ 420
Query: 421 VTSDVLLQEMVFFILGEQREPETLAEISRHPLRHRLIEHCDHISDEISIMTLRMFEHLLQ 480
VTSDVLLQEMVFFILGEQREPETLAEISRHPLRHRLIEHCDHISDEISIMTLRMFEHLLQ
Sbjct: 421 VTSDVLLQEMVFFILGEQREPETLAEISRHPLRHRLIEHCDHISDEISIMTLRMFEHLLQ 480
Query: 481 KPNEHILYNLVLRNLEERNYTEYKPLCPEDKDVVENGLIAGAVDLEEDPLFTDISPENTL 540
KPNEHILYNLVLRNLEERNYTEYKPLCPEDKDVVENGLIAGAVDLEEDPLFTDISPENTL
Sbjct: 481 KPNEHILYNLVLRNLEERNYTEYKPLCPEDKDVVENGLIAGAVDLEEDPLFTDISPENTL 540
Query: 541 PNQEWLSSSPPATPDHPKNDGKTEVHKIVNSFLCLVPDDAKSSYHVEGTGYDTYLRDAHR 600
PNQEWLSSSPPATPDHPKNDGKTEVHKIVNSFLCLVPDDAKSSYHVEGTGYDTYLRDAHR
Sbjct: 541 PNQEWLSSSPPATPDHPKNDGKTEVHKIVNSFLCLVPDDAKSSYHVEGTGYDTYLRDAHR 600
Query: 601 QFRDYCAICLRWEWPGSPKALEKCNLEAAFFEGHFLKVLFDRMGRILDQPYDVNLQVTSV 660
QFRDYCAICLRWEWPGSPKALEKCNLEAAFFEGHFLKVLFDRMGRILDQPYDVNLQVTSV
Sbjct: 601 QFRDYCAICLRWEWPGSPKALEKCNLEAAFFEGHFLKVLFDRMGRILDQPYDVNLQVTSV 660
Query: 661 LSRLSLFPHPHIHEYLLDPYVNLAPGCRSLFSVIVRVVGDLMLRIQRIQDFTPKLLLVRK 720
LSRLSLFPHPHIHEYLLDPYVNLAPGCRSLFSVIVRVVGDLMLRIQRIQDFTPKLLLVRK
Sbjct: 661 LSRLSLFPHPHIHEYLLDPYVNLAPGCRSLFSVIVRVVGDLMLRIQRIQDFTPKLLLVRK 720
Query: 721 RLLGLEPEGPI 731
RLLGLEPEGP+
Sbjct: 721 RLLGLEPEGPM 731
>gi|89337270 retinoic acid induced 16 [Homo sapiens]
Length = 743
Score = 709 bits (1830), Expect = 0.0
Identities = 388/763 (50%), Positives = 502/763 (65%), Gaps = 41/763 (5%)
Query: 1 MFSKFTSILQHAVEALAPSLPLQEDFVYHWKAITHYYIETSDDKAPVTDTNIPSHLEQML 60
M S+ ++LQ AV A PS+ L + FV HWK ITHYYIE++D+ P T+IP L+QML
Sbjct: 1 MLSRLGALLQEAVGAREPSIDLLQAFVEHWKGITHYYIESTDESTPAKKTDIPWRLKQML 60
Query: 61 DILVQEENERES-GETGPCMEYLLHHKILETLYTLGKADCPPGMKQQVLVFYTKLLGRIR 119
DILV EE ++ + GE GPC+EYLL HKILETL TLGKA+ PPGM+QQV F++K+L +++
Sbjct: 61 DILVYEEQQQAAAGEAGPCLEYLLQHKILETLCTLGKAEYPPGMRQQVFQFFSKVLAQVQ 120
Query: 120 QPLLPHINVHRPVQKLIRLCGEVLATPTENEEIQFLCIVCAKLKQDPYLVNFFLENKMKS 179
PLL +++VHRPVQKL+RL G + TE EE+QF ++C+K++QDP L+ + LE K K
Sbjct: 121 HPLLHYLSVHRPVQKLLRLGGTASGSVTEKEEVQFTTVLCSKIQQDPELLAYILEGK-KI 179
Query: 180 LASK---GVPNVISEDTLKGQDSLSTDTGQSRQPEELSGATGMEQTELEDEPPHQMDHLS 236
+ K G P + +DT D + G +P+ + G + L P + + L
Sbjct: 180 VGRKKACGEPTALPKDTTSHGDKDCSHDGAPARPQLDGESCGAQA--LNSHMPAETEELD 237
Query: 237 TSLDNLSVTSLPEASVVCPNQDYNLVNSLLNLTRSPDGRIAVKACEGLMLLVSLPEPAAA 296
+ NL+ SLL L +S R+A+KA E L+LLVS+ PAAA
Sbjct: 238 GG-----------------TTESNLITSLLGLCQSKKSRVALKAQENLLLLVSMASPAAA 280
Query: 297 KCLTQSTCLCELLTDRLASLYKALPQSVDPLDIETVEAINWGLDSYSHKEDASAFPGKRA 356
L QS+ C + L LY+++P +DP DI T+E I+W L S D ++FPGK A
Sbjct: 281 TYLVQSSACCPAIVRHLCQLYRSMPVFLDPADIATLEGISWRLPSAP--SDEASFPGKEA 338
Query: 357 LISFLSWFDYCDQLIKEAQKTAAVALAKAVHERFFIGVMEPQLMQTSEMGILTSTALLHR 416
L +FL WFDYCD LI EA A ALAKAV E FF+ ++PQL+ SE ILTSTALL
Sbjct: 339 LAAFLGWFDYCDHLITEAHTVVADALAKAVAENFFVETLQPQLLHVSEQSILTSTALLTA 398
Query: 417 IVRQVTSDVLLQEMVFFILGEQREPETLAEISRHPLRHRLIEHCDHISDEISIMTLRMFE 476
++RQ+ S LL+E V F+LG R+PE + + H L LI HCDH+SDEISI TLR+FE
Sbjct: 399 MLRQLRSPALLREAVAFLLGTDRQPEAPGD-NPHTLYAHLIGHCDHLSDEISITTLRLFE 457
Query: 477 HLLQKPNEHILYNLVLRNLEERNYTEYKPLCPEDKDVVENGLIAGAVDLEEDPLFTDISP 536
LLQKP+E I+++LVLRNLE R Y + PE + +DLEEDP FTD
Sbjct: 458 ELLQKPHEGIIHSLVLRNLEGRPYVAWGSPEPESYE--------DTLDLEEDPYFTD--- 506
Query: 537 ENTLPNQEWLSSSPPATPDHPKNDGKTEVHKIVNSFLCLVPDDAKSSYHVEGTGYDTYLR 596
+ + + + + P DGKT V +IVNSFLCLVP++AK+S +E TGYDTY+
Sbjct: 507 --SFLDSGFQTPAKPRLAPATSYDGKTAVTEIVNSFLCLVPEEAKTSAFLEETGYDTYVH 564
Query: 597 DAHRQFRDYCAICLRWEWPGSPKALEKCNLEAAFFEGHFLKVLFDRMGRILDQPYDVNLQ 656
DA+ F++ + W WP +P L+ E FFEGHFL+VLFDRM RILDQPY +NLQ
Sbjct: 565 DAYGLFQECSSRVASWGWPLTPTPLDPHEPERPFFEGHFLRVLFDRMSRILDQPYSLNLQ 624
Query: 657 VTSVLSRLSLFPHPHIHEYLLDPYVNLAPGCRSLFSVIVRVVGDLMLRIQRIQDFTPKLL 716
VTSVLSRL+LFPHPHIHEYLLDPY++LAPGCRSLFSV+VRV+GDLM RIQR+ F KLL
Sbjct: 625 VTSVLSRLALFPHPHIHEYLLDPYISLAPGCRSLFSVLVRVIGDLMQRIQRVPQFPGKLL 684
Query: 717 LVRKRLLGLEPEGPIIDHITLLEGVIVLEEFCKELAAIAFVKY 759
LVRK+L G P G +DH TLL+GV+VLEEFCKELAAIAFVK+
Sbjct: 685 LVRKQLTGQAP-GEQLDHQTLLQGVVVLEEFCKELAAIAFVKF 726
>gi|149393138 hypothetical protein LOC84067 isoform 2 [Homo sapiens]
Length = 972
Score = 73.9 bits (180), Expect = 5e-13
Identities = 60/232 (25%), Positives = 108/232 (46%), Gaps = 27/232 (11%)
Query: 273 DGRIAVKACEGLMLLVSLP--EPAAAKCLTQSTCLCELLTDRLASLYKALPQSVDPLDIE 330
+G + +A + L+LL++L P + + + C +L L++LY +LP+ ++
Sbjct: 223 EGTLGQQARDALLLLMALSAGSPTVGRYIADHSYFCPVLATGLSALYSSLPRKIE----- 277
Query: 331 TVEAINWGLDSYSHKEDASAFPGKRALISFLSWFDYCDQLIKEAQKTAAVALAKAVHERF 390
V +W +ED P AL F+S ++C+ +I+ A L +H F
Sbjct: 278 -VPGDDWHC---LRREDWLGVP---ALALFMSSLEFCNAVIQVAHPLVQKQLVDYIHNGF 330
Query: 391 FIGVMEPQLMQTSEMGILTSTALLHRIVRQVTSDVLLQEMVFFILGEQREPETLAE--IS 448
+ VM P L +TS ++ STA L +R ++ LL+ + F+L + + T+ + ++
Sbjct: 331 LVPVMGPALHKTSVEEMIASTAYLELFLRSISEPALLRTFLRFLLLHRHDTHTILDTLVA 390
Query: 449 RHPLRHRLIEHCDHISDEISIMTLRMFEHLLQKPNEHILYNLVLRNLEERNY 500
R RL +++L +F LL E +L LVLR L N+
Sbjct: 391 RIGSNSRL-----------CMVSLSLFRTLLNLSCEDVLLQLVLRYLVPCNH 431
Score = 50.1 bits (118), Expect = 8e-06
Identities = 53/191 (27%), Positives = 83/191 (43%), Gaps = 20/191 (10%)
Query: 26 FVYHWKAITHYYIETSDDKAP--VTDTN-IPSHLEQMLDILVQEENERESGETGP--CME 80
F HW + AP D + + +H QML +L E+ S TGP +E
Sbjct: 40 FKNHWSQVVRILERQGPRAAPGGADDLSAVRNHTYQMLTLLA-EDRAVPSAPTGPGPLLE 98
Query: 81 YLLHHKILETLYT--LGKADCPPGMKQ---QVLVFYTKLLGRIRQPLLPHINVHRPVQKL 135
+ LH +L + T L + G+++ + L + L+ RQPLL H V + L
Sbjct: 99 FALHEDLLTRVLTWQLQWDELGDGVEERRAEQLKLFEMLVSEARQPLLRHGPVREALLTL 158
Query: 136 IRLCGEVLATPTENEE--IQFLCIVCAKLKQDPYLVNFFLENKMKS-------LASKGVP 186
+ CG + + +E + L +C + Q+P L+ FFL+ + L S+ VP
Sbjct: 159 LDACGRPVPSSPALDEGLVLLLSQLCVCVAQEPSLLEFFLQPPPEPGAAPRLLLFSRLVP 218
Query: 187 NVISEDTLKGQ 197
V E TL Q
Sbjct: 219 FVHREGTLGQQ 229
Score = 42.4 bits (98), Expect = 0.002
Identities = 27/93 (29%), Positives = 46/93 (49%), Gaps = 1/93 (1%)
Query: 631 FEGHFLKVLFDRMGRILDQPYDVNLQVTSVLSRLSLFPHPHIHEYLLDPYVNLAPGCRSL 690
F G F+ VLF ++ +L VN +T ++++L+ P P + +LL+ + P +SL
Sbjct: 737 FTGPFMAVLFAKLENMLQNSVYVNFLLTGLVAQLACHPQPLLRSFLLNTNMVFQPSVKSL 796
Query: 691 FSVIVRVVGDLMLRIQRIQDFTPKLLLVRKRLL 723
V+ V + +DF P LL K+ L
Sbjct: 797 LQVLGSVKNKIENFAASQEDF-PALLSKAKKYL 828
>gi|149393140 hypothetical protein LOC84067 isoform 1 [Homo sapiens]
Length = 986
Score = 73.9 bits (180), Expect = 5e-13
Identities = 60/232 (25%), Positives = 108/232 (46%), Gaps = 27/232 (11%)
Query: 273 DGRIAVKACEGLMLLVSLP--EPAAAKCLTQSTCLCELLTDRLASLYKALPQSVDPLDIE 330
+G + +A + L+LL++L P + + + C +L L++LY +LP+ ++
Sbjct: 223 EGTLGQQARDALLLLMALSAGSPTVGRYIADHSYFCPVLATGLSALYSSLPRKIE----- 277
Query: 331 TVEAINWGLDSYSHKEDASAFPGKRALISFLSWFDYCDQLIKEAQKTAAVALAKAVHERF 390
V +W +ED P AL F+S ++C+ +I+ A L +H F
Sbjct: 278 -VPGDDWHC---LRREDWLGVP---ALALFMSSLEFCNAVIQVAHPLVQKQLVDYIHNGF 330
Query: 391 FIGVMEPQLMQTSEMGILTSTALLHRIVRQVTSDVLLQEMVFFILGEQREPETLAE--IS 448
+ VM P L +TS ++ STA L +R ++ LL+ + F+L + + T+ + ++
Sbjct: 331 LVPVMGPALHKTSVEEMIASTAYLELFLRSISEPALLRTFLRFLLLHRHDTHTILDTLVA 390
Query: 449 RHPLRHRLIEHCDHISDEISIMTLRMFEHLLQKPNEHILYNLVLRNLEERNY 500
R RL +++L +F LL E +L LVLR L N+
Sbjct: 391 RIGSNSRL-----------CMVSLSLFRTLLNLSCEDVLLQLVLRYLVPCNH 431
Score = 50.1 bits (118), Expect = 8e-06
Identities = 53/191 (27%), Positives = 83/191 (43%), Gaps = 20/191 (10%)
Query: 26 FVYHWKAITHYYIETSDDKAP--VTDTN-IPSHLEQMLDILVQEENERESGETGP--CME 80
F HW + AP D + + +H QML +L E+ S TGP +E
Sbjct: 40 FKNHWSQVVRILERQGPRAAPGGADDLSAVRNHTYQMLTLLA-EDRAVPSAPTGPGPLLE 98
Query: 81 YLLHHKILETLYT--LGKADCPPGMKQ---QVLVFYTKLLGRIRQPLLPHINVHRPVQKL 135
+ LH +L + T L + G+++ + L + L+ RQPLL H V + L
Sbjct: 99 FALHEDLLTRVLTWQLQWDELGDGVEERRAEQLKLFEMLVSEARQPLLRHGPVREALLTL 158
Query: 136 IRLCGEVLATPTENEE--IQFLCIVCAKLKQDPYLVNFFLENKMKS-------LASKGVP 186
+ CG + + +E + L +C + Q+P L+ FFL+ + L S+ VP
Sbjct: 159 LDACGRPVPSSPALDEGLVLLLSQLCVCVAQEPSLLEFFLQPPPEPGAAPRLLLFSRLVP 218
Query: 187 NVISEDTLKGQ 197
V E TL Q
Sbjct: 219 FVHREGTLGQQ 229
Score = 42.4 bits (98), Expect = 0.002
Identities = 27/93 (29%), Positives = 46/93 (49%), Gaps = 1/93 (1%)
Query: 631 FEGHFLKVLFDRMGRILDQPYDVNLQVTSVLSRLSLFPHPHIHEYLLDPYVNLAPGCRSL 690
F G F+ VLF ++ +L VN +T ++++L+ P P + +LL+ + P +SL
Sbjct: 751 FTGPFMAVLFAKLENMLQNSVYVNFLLTGLVAQLACHPQPLLRSFLLNTNMVFQPSVKSL 810
Query: 691 FSVIVRVVGDLMLRIQRIQDFTPKLLLVRKRLL 723
V+ V + +DF P LL K+ L
Sbjct: 811 LQVLGSVKNKIENFAASQEDF-PALLSKAKKYL 842
>gi|158341646 hypothetical protein LOC729830 [Homo sapiens]
Length = 1040
Score = 62.8 bits (151), Expect = 1e-09
Identities = 58/246 (23%), Positives = 109/246 (44%), Gaps = 31/246 (12%)
Query: 261 LVNSLLNLTRSPDGRIAVKACEGLMLLVSLP--EPAAAKCLTQSTCLCELLTDRLASLYK 318
L+ SLL +G + +A + L+ ++SL A + ++T C +L L+ LY
Sbjct: 196 LIFSLLIPFIHREGSVGQQARDALLFIMSLSAENTMVAHHIVENTYFCPVLATGLSGLYS 255
Query: 319 ALPQSVDPLDIETVEAINWGLDSYSHKEDASAFPGKRALISFLSWFDYCDQLIKEAQKTA 378
+LP ++ E + K+D P +L+ F++ ++C+ +I+ A
Sbjct: 256 SLPTKLEEKGEEWHCLL---------KDDWLLLP---SLVQFMNSLEFCNAVIQVAHPLI 303
Query: 379 AVALAKAVHERFFIGVMEPQLMQTSEMGILTSTALLHRIVRQVTSDVLLQEMVFFILGEQ 438
L ++ F + V+ P L + + ++T+TA L +R ++ LL+ + FIL Q
Sbjct: 304 RNQLVNYIYNGFLVPVLAPALHKVTVEEVMTTTAYLDLFLRSISEPALLEIFLRFILLHQ 363
Query: 439 REP----ETLAEISRHPLRHRLIEHCDHISDEISIMTLRMFEHLLQKPNEHILYNLVLRN 494
E +TL P R + +++L +F L+ E ++ LVLR
Sbjct: 364 HENVHILDTLTSRINTPFR-------------LCVVSLALFRTLIGLHCEDVMLQLVLRY 410
Query: 495 LEERNY 500
L N+
Sbjct: 411 LIPCNH 416
Score = 52.0 bits (123), Expect = 2e-06
Identities = 30/122 (24%), Positives = 61/122 (50%), Gaps = 3/122 (2%)
Query: 52 IPSHLEQMLDILVQEENERESGETGPCMEYLLHHKILETLYTLG-KADCPPGMKQQVLVF 110
+ +++E ML +L++E+ + GP +E+++ I+E L+ + + K + L
Sbjct: 64 VQNYVEHMLFLLIEEQ--AKDAAMGPILEFVVSENIMEKLFLWSLRREFTDETKIEQLKM 121
Query: 111 YTKLLGRIRQPLLPHINVHRPVQKLIRLCGEVLATPTENEEIQFLCIVCAKLKQDPYLVN 170
Y L+ + QPLL H + +P+ L+ C E + + L +C+ L +DP ++
Sbjct: 122 YEMLVTQSHQPLLHHKPILKPLMMLLSSCSGTTTPTVEEKLVVLLNQLCSILAKDPSILE 181
Query: 171 FF 172
F
Sbjct: 182 LF 183
Score = 46.2 bits (108), Expect = 1e-04
Identities = 24/93 (25%), Positives = 48/93 (51%)
Query: 631 FEGHFLKVLFDRMGRILDQPYDVNLQVTSVLSRLSLFPHPHIHEYLLDPYVNLAPGCRSL 690
F G F+ V+ ++ +L+ VNL + ++++L+ +P P + +LL+ + P RSL
Sbjct: 849 FTGPFISVVLSKLENMLENSLHVNLLLIGIITQLASYPQPLLRSFLLNTNMVFQPSVRSL 908
Query: 691 FSVIVRVVGDLMLRIQRIQDFTPKLLLVRKRLL 723
+ V+ V + +DF L+ ++ LL
Sbjct: 909 YQVLASVKNKIEQFASVERDFPGLLIQAQQYLL 941
>gi|58743365 ring finger protein 157 [Homo sapiens]
Length = 679
Score = 35.4 bits (80), Expect = 0.20
Identities = 39/132 (29%), Positives = 55/132 (41%), Gaps = 16/132 (12%)
Query: 193 TLKGQDSLSTDTGQS-RQPEELSGATGMEQTEL-EDEPPHQMDHLSTSLDNL-SVTSLPE 249
T+ D LS + Q + + LS +T + L E+E H T L SV L E
Sbjct: 412 TISPLDRLSDSSSQGLKLKKSLSKSTSQNSSVLHEEEDEHSCSESETQLSQRPSVQHLGE 471
Query: 250 ASVVCPNQDYNLVNSLLNLTRSPDGRIAVKACEG--LMLLVSLPEPAAAKCLTQST---C 304
V P + NLT S G I +C G L +S PE A+ L QS
Sbjct: 472 ECGVTPESE--------NLTLSSSGAIDQSSCTGTPLSSTISSPEGPASSSLAQSVMSMA 523
Query: 305 LCELLTDRLASL 316
++ TD ++S+
Sbjct: 524 SSQISTDTVSSM 535
>gi|50843948 Rho GTPase activating protein 10 [Homo sapiens]
Length = 786
Score = 35.0 bits (79), Expect = 0.26
Identities = 40/195 (20%), Positives = 78/195 (40%), Gaps = 14/195 (7%)
Query: 396 EPQLMQTSEMGILTSTALLHRIVRQVTSDVLLQEMV--FFILGEQREPETLAEISR---H 450
E L +++ + T T+ L + +R + ++ E+ F + + PE+ H
Sbjct: 441 EVDLENSADWEVKTITSALKQYLRSLPEPLMTYELHGDFIVPAKSGSPESRVNAIHFLVH 500
Query: 451 PLRHRLIEHCDHISDEISIMTLRMFEHLLQKPNEHILYNLVLRNLEERNYTEYKPLCPED 510
L + E D + ++ ++ ++L+ N +++ L +E L +
Sbjct: 501 KLPEKNKEMLDILVKHLTNVSNHSKQNLMTVANLGVVFGPTLMRPQEETVAALMDL--KF 558
Query: 511 KDVVENGLIAGAVDLEEDPLFTDISPENTLPNQEWLSSSPP-ATPDHPKNDGKTEVHKIV 569
+++V LI + P P+ T P LS+SPP A P K G+ +
Sbjct: 559 QNIVVEILIENHEKIFRTP------PDTTFPEPTCLSASPPNAPPRQSKRQGQRTKRPVA 612
Query: 570 NSFLCLVPDDAKSSY 584
LCL +D + Y
Sbjct: 613 VYNLCLELEDGDNPY 627
>gi|212549782 caspase 8 associated protein 2 [Homo sapiens]
Length = 1982
Score = 34.3 bits (77), Expect = 0.45
Identities = 47/161 (29%), Positives = 66/161 (40%), Gaps = 23/161 (14%)
Query: 158 VCAKLKQDPYLVNFFLENKMKSLASKGVPNVISEDTLKGQDS-LSTDTGQSRQPEELSGA 216
VC+ K P + + LE+ SL VP+ + D G S L D S PEE+ A
Sbjct: 1422 VCSVEKSKPCVSSILLEDLAVSLT---VPSPLKSD---GHLSFLKPDMSSSSTPEEVISA 1475
Query: 217 TGMEQTELEDEPPHQMD-HLSTSLDNLSVTSLPEAS----VVCPNQDY--NLVNSLLNLT 269
E LE+E + D HL+ DN S S +S V P Y NL + +
Sbjct: 1476 HFSEDALLEEEDASEQDIHLALESDNSSSKSSCSSSWTSRSVAPGFQYHPNLPMHAVIME 1535
Query: 270 RSPDGRIAVKACEGLMLLVSLPEPAAAKCLTQSTCLCELLT 310
+S D ++ + P+ + L QS ELLT
Sbjct: 1536 KSND---------HFIVKIRRATPSTSSGLKQSMMPDELLT 1567
>gi|6912288 caspase 8 associated protein 2 [Homo sapiens]
Length = 1982
Score = 34.3 bits (77), Expect = 0.45
Identities = 47/161 (29%), Positives = 66/161 (40%), Gaps = 23/161 (14%)
Query: 158 VCAKLKQDPYLVNFFLENKMKSLASKGVPNVISEDTLKGQDS-LSTDTGQSRQPEELSGA 216
VC+ K P + + LE+ SL VP+ + D G S L D S PEE+ A
Sbjct: 1422 VCSVEKSKPCVSSILLEDLAVSLT---VPSPLKSD---GHLSFLKPDMSSSSTPEEVISA 1475
Query: 217 TGMEQTELEDEPPHQMD-HLSTSLDNLSVTSLPEAS----VVCPNQDY--NLVNSLLNLT 269
E LE+E + D HL+ DN S S +S V P Y NL + +
Sbjct: 1476 HFSEDALLEEEDASEQDIHLALESDNSSSKSSCSSSWTSRSVAPGFQYHPNLPMHAVIME 1535
Query: 270 RSPDGRIAVKACEGLMLLVSLPEPAAAKCLTQSTCLCELLT 310
+S D ++ + P+ + L QS ELLT
Sbjct: 1536 KSND---------HFIVKIRRATPSTSSGLKQSMMPDELLT 1567
>gi|212549532 caspase 8 associated protein 2 [Homo sapiens]
Length = 1982
Score = 34.3 bits (77), Expect = 0.45
Identities = 47/161 (29%), Positives = 66/161 (40%), Gaps = 23/161 (14%)
Query: 158 VCAKLKQDPYLVNFFLENKMKSLASKGVPNVISEDTLKGQDS-LSTDTGQSRQPEELSGA 216
VC+ K P + + LE+ SL VP+ + D G S L D S PEE+ A
Sbjct: 1422 VCSVEKSKPCVSSILLEDLAVSLT---VPSPLKSD---GHLSFLKPDMSSSSTPEEVISA 1475
Query: 217 TGMEQTELEDEPPHQMD-HLSTSLDNLSVTSLPEAS----VVCPNQDY--NLVNSLLNLT 269
E LE+E + D HL+ DN S S +S V P Y NL + +
Sbjct: 1476 HFSEDALLEEEDASEQDIHLALESDNSSSKSSCSSSWTSRSVAPGFQYHPNLPMHAVIME 1535
Query: 270 RSPDGRIAVKACEGLMLLVSLPEPAAAKCLTQSTCLCELLT 310
+S D ++ + P+ + L QS ELLT
Sbjct: 1536 KSND---------HFIVKIRRATPSTSSGLKQSMMPDELLT 1567
>gi|46240864 sperm associated antigen 17 [Homo sapiens]
Length = 2223
Score = 33.5 bits (75), Expect = 0.76
Identities = 27/103 (26%), Positives = 47/103 (45%), Gaps = 6/103 (5%)
Query: 173 LENKMKSLASKGVPNVISEDTLKGQDSLSTDTGQSRQPEELSGATGMEQT-ELE-DEPPH 230
++N++ K N + + DSLS + E + T ++ T +L D PH
Sbjct: 1903 IKNRIIPPFFKSELNQLYQSQYNHLDSLSKKLPSFTKKNEDANETAVQDTSDLNLDFKPH 1962
Query: 231 QMDHLSTSLDNLSVTSLPEASVVCPNQDYNLVNSLLNLTRSPD 273
++ +S SV SLP+ + +D+ N NLT+SP+
Sbjct: 1963 KVSEQKSS----SVPSLPKPEISADKKDFTAQNQTENLTKSPE 2001
>gi|50083291 amyloid beta A4 precursor protein-binding, family B,
member 2 [Homo sapiens]
Length = 736
Score = 32.3 bits (72), Expect = 1.7
Identities = 18/41 (43%), Positives = 24/41 (58%), Gaps = 6/41 (14%)
Query: 546 LSSSPPATPDHPKNDGKTE--VHKIVNSFLCLVPDDAKSSY 584
+SSSP DHPK KT+ +H+I N L P D +SS+
Sbjct: 226 VSSSPETKKDHPKTGAKTDCALHRIQN----LAPSDEESSW 262
>gi|187936949 solute carrier family 39 (zinc transporter), member 10
[Homo sapiens]
Length = 831
Score = 32.3 bits (72), Expect = 1.7
Identities = 31/122 (25%), Positives = 53/122 (43%), Gaps = 23/122 (18%)
Query: 456 LIEHCDHISDEISIMTLRMFEHLLQKPNEHILYNLVLRNLEE----RNYTEYKPLCPEDK 511
+IEHC +RMF+H Q+ + + + +N EE R +++K D
Sbjct: 510 IIEHC-----------IRMFKHYKQQRGKQKWF--MKQNTEESTIGRKLSDHKLNNTPDS 556
Query: 512 DVVENGLIAGAVD--LEEDPL----FTDISPENTLPNQEWLSSSPPATPDHPKNDGKTEV 565
D ++ +AG D + ED L TD+ + P + +L DH +DG +
Sbjct: 557 DWLQLKPLAGTDDSVVSEDRLNETELTDLEGQQESPPKNYLCIEEEKIIDHSHSDGLHTI 616
Query: 566 HK 567
H+
Sbjct: 617 HE 618
>gi|55741750 solute carrier family 39 (zinc transporter), member 10
[Homo sapiens]
Length = 831
Score = 32.3 bits (72), Expect = 1.7
Identities = 31/122 (25%), Positives = 53/122 (43%), Gaps = 23/122 (18%)
Query: 456 LIEHCDHISDEISIMTLRMFEHLLQKPNEHILYNLVLRNLEE----RNYTEYKPLCPEDK 511
+IEHC +RMF+H Q+ + + + +N EE R +++K D
Sbjct: 510 IIEHC-----------IRMFKHYKQQRGKQKWF--MKQNTEESTIGRKLSDHKLNNTPDS 556
Query: 512 DVVENGLIAGAVD--LEEDPL----FTDISPENTLPNQEWLSSSPPATPDHPKNDGKTEV 565
D ++ +AG D + ED L TD+ + P + +L DH +DG +
Sbjct: 557 DWLQLKPLAGTDDSVVSEDRLNETELTDLEGQQESPPKNYLCIEEEKIIDHSHSDGLHTI 616
Query: 566 HK 567
H+
Sbjct: 617 HE 618
>gi|21264343 scaffold attachment factor B [Homo sapiens]
Length = 915
Score = 32.0 bits (71), Expect = 2.2
Identities = 22/81 (27%), Positives = 38/81 (46%), Gaps = 4/81 (4%)
Query: 173 LENKMKSLASKGVPNVISEDTLKGQDSLSTDTGQSRQPEELSGATGMEQTELEDEPPHQM 232
+E K++ +G E T +G S + + R+PEE G+E LE+
Sbjct: 58 MERLKKAIEDEGGNPDEIEITSEGNKKTSKRSSKGRKPEE----EGVEDNGLEENSGDGQ 113
Query: 233 DHLSTSLDNLSVTSLPEASVV 253
+ + TSL+NL + + SV+
Sbjct: 114 EDVETSLENLQDIDIMDISVL 134
>gi|22027648 lipin 1 [Homo sapiens]
Length = 890
Score = 30.4 bits (67), Expect = 6.4
Identities = 23/72 (31%), Positives = 33/72 (45%), Gaps = 8/72 (11%)
Query: 192 DTLKGQDSLSTDTGQSRQPEELSGATGME-----QTELEDEPPHQMDHLSTSLDNLSVTS 246
D+LK D+++T + P E+S ME +T D PP Q D +NLS+
Sbjct: 165 DSLKRDDNMNTSEDEDMFPIEMSSDEAMELLESSRTLPNDIPPFQDD---IPEENLSLAV 221
Query: 247 LPEASVVCPNQD 258
+ S PN D
Sbjct: 222 IYPQSASYPNSD 233
>gi|24307991 p53-associated parkin-like cytoplasmic protein [Homo
sapiens]
Length = 2517
Score = 30.4 bits (67), Expect = 6.4
Identities = 22/67 (32%), Positives = 31/67 (46%), Gaps = 9/67 (13%)
Query: 290 LPEPAAAKCLTQSTCLCELLTDRLASLYKALPQSVDPLDIETVEAINWGLDSYSHKEDAS 349
LP+ AA+ L + TC +L L Q++ D E V A+ W LD Y + + S
Sbjct: 1358 LPDDEAAQALGK-TCW--------EALVSPLVQNITSPDAEGVSALGWLLDQYLEQRETS 1408
Query: 350 AFPGKRA 356
P RA
Sbjct: 1409 RNPLSRA 1415
>gi|239745140 PREDICTED: similar to hect domain and RLD 2 [Homo
sapiens]
Length = 1052
Score = 30.0 bits (66), Expect = 8.4
Identities = 17/51 (33%), Positives = 23/51 (45%)
Query: 321 PQSVDPLDIETVEAINWGLDSYSHKEDASAFPGKRALISFLSWFDYCDQLI 371
P P D+E+ EA++ +D K D S K+ L W D C Q I
Sbjct: 484 PMPSVPEDLESREAMSSFMDQLEEKADLSELVKKKELCFIHHWRDRCHQKI 534
>gi|10092639 cysteine-rich motor neuron 1 [Homo sapiens]
Length = 1036
Score = 30.0 bits (66), Expect = 8.4
Identities = 18/72 (25%), Positives = 33/72 (45%), Gaps = 7/72 (9%)
Query: 451 PLRHRLIEHCDHISDEISIMTLRMFEHLLQKPNEHILYNLVLRNLEE-------RNYTEY 503
P LI C+ I+ + T+R + + P++ + + + R EE R ++
Sbjct: 124 PCNENLIAGCNIINGKCECNTIRTCSNPFEFPSQDMCLSALKRIEEEKPDCSKARCEVQF 183
Query: 504 KPLCPEDKDVVE 515
P CPED ++E
Sbjct: 184 SPRCPEDSVLIE 195
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.320 0.136 0.407
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 30,879,098
Number of Sequences: 37866
Number of extensions: 1453068
Number of successful extensions: 3638
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 3597
Number of HSP's gapped (non-prelim): 36
length of query: 765
length of database: 18,247,518
effective HSP length: 110
effective length of query: 655
effective length of database: 14,082,258
effective search space: 9223878990
effective search space used: 9223878990
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 66 (30.0 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.