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Search of human proteins with 205277366
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|205277366 hypothetical protein LOC201158 isoform 1 [Homo
sapiens]
(276 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|205277366 hypothetical protein LOC201158 isoform 1 [Homo sapi... 572 e-163
gi|205277364 hypothetical protein LOC201158 isoform 2 [Homo sapi... 317 7e-87
gi|148747574 hypothetical protein LOC51030 [Homo sapiens] 306 2e-83
gi|118421083 hypothetical protein LOC780776 [Homo sapiens] 199 2e-51
gi|28212280 hypothetical protein LOC283579 [Homo sapiens] 49 4e-06
gi|62243734 signal transducing adaptor family member 2 isoform 1... 45 7e-05
gi|237858668 hypothetical protein LOC123207 isoform d [Homo sapi... 42 6e-04
gi|224494572 hypothetical protein LOC401082 [Homo sapiens] 42 8e-04
gi|169216486 PREDICTED: hCG_1742852 [Homo sapiens] 42 8e-04
gi|169216528 PREDICTED: hCG_1742852 [Homo sapiens] 42 8e-04
gi|239747074 PREDICTED: hypothetical protein XP_002343911 [Homo ... 40 0.002
gi|169216761 PREDICTED: hCG_1742852 [Homo sapiens] 40 0.002
gi|194473995 zinc finger protein 195 isoform 2 [Homo sapiens] 40 0.002
gi|194473688 zinc finger protein 195 isoform 1 [Homo sapiens] 40 0.002
gi|54112407 protein kinase CHK2 isoform c [Homo sapiens] 40 0.002
gi|169213800 PREDICTED: hypothetical protein [Homo sapiens] 39 0.004
gi|169214229 PREDICTED: hypothetical protein [Homo sapiens] 39 0.004
gi|169213573 PREDICTED: hypothetical protein [Homo sapiens] 39 0.004
gi|63999355 chromosome 9 open reading frame 37 [Homo sapiens] 39 0.005
gi|239751420 PREDICTED: similar to hCG2039376 [Homo sapiens] 38 0.011
gi|57529246 ubiquitin thioesterase 19 [Homo sapiens] 38 0.011
gi|29029530 sulfotransferase family, cytosolic, 1C, member 1 iso... 37 0.019
gi|8922871 oleoyl-ACP hydrolase isoform 1 [Homo sapiens] 37 0.019
gi|4506473 v-rel reticuloendotheliosis viral oncogene homolog [H... 36 0.032
gi|239048907 checkpoint with forkhead and ring finger domains is... 36 0.042
gi|217035093 cyclic nucleotide gated channel alpha 1 isoform 1 [... 35 0.093
gi|148839316 NIMA-related kinase 4 [Homo sapiens] 34 0.12
gi|195963398 suppressor of G2 allele of SKP1 isoform a [Homo sap... 34 0.12
gi|239751535 PREDICTED: hypothetical protein [Homo sapiens] 34 0.16
gi|239746046 PREDICTED: hypothetical protein XP_002343643 [Homo ... 34 0.16
>gi|205277366 hypothetical protein LOC201158 isoform 1 [Homo
sapiens]
Length = 276
Score = 572 bits (1473), Expect = e-163
Identities = 276/276 (100%), Positives = 276/276 (100%)
Query: 1 MLQQDSNDDTEDVSLFDAEEETTNRPRKAKIRHPVASFFHLFFRVSAIIVCLLCELLSSS 60
MLQQDSNDDTEDVSLFDAEEETTNRPRKAKIRHPVASFFHLFFRVSAIIVCLLCELLSSS
Sbjct: 1 MLQQDSNDDTEDVSLFDAEEETTNRPRKAKIRHPVASFFHLFFRVSAIIVCLLCELLSSS 60
Query: 61 FITCMVTIILLLSCDFWAVKNVTGRLMVGLRWWNHIDEDGKSHWVFESRKESSQENKTVS 120
FITCMVTIILLLSCDFWAVKNVTGRLMVGLRWWNHIDEDGKSHWVFESRKESSQENKTVS
Sbjct: 61 FITCMVTIILLLSCDFWAVKNVTGRLMVGLRWWNHIDEDGKSHWVFESRKESSQENKTVS 120
Query: 121 EAESRIFWLGLIACSVLWVIFAFSALFSFTVKWLRRSRHIAQTGLKVLGSRDPPASAFQS 180
EAESRIFWLGLIACSVLWVIFAFSALFSFTVKWLRRSRHIAQTGLKVLGSRDPPASAFQS
Sbjct: 121 EAESRIFWLGLIACSVLWVIFAFSALFSFTVKWLRRSRHIAQTGLKVLGSRDPPASAFQS 180
Query: 181 AGITGVSRCPGHPSRKFHQVDINSFTRITDRALYWKPAPRLSSPPLRAAPGNCQQMAPAR 240
AGITGVSRCPGHPSRKFHQVDINSFTRITDRALYWKPAPRLSSPPLRAAPGNCQQMAPAR
Sbjct: 181 AGITGVSRCPGHPSRKFHQVDINSFTRITDRALYWKPAPRLSSPPLRAAPGNCQQMAPAR 240
Query: 241 LFLSLRLWAWRGGGESPNSRGTGEPGPKFHLASGMH 276
LFLSLRLWAWRGGGESPNSRGTGEPGPKFHLASGMH
Sbjct: 241 LFLSLRLWAWRGGGESPNSRGTGEPGPKFHLASGMH 276
>gi|205277364 hypothetical protein LOC201158 isoform 2 [Homo
sapiens]
Length = 203
Score = 317 bits (812), Expect = 7e-87
Identities = 154/154 (100%), Positives = 154/154 (100%)
Query: 1 MLQQDSNDDTEDVSLFDAEEETTNRPRKAKIRHPVASFFHLFFRVSAIIVCLLCELLSSS 60
MLQQDSNDDTEDVSLFDAEEETTNRPRKAKIRHPVASFFHLFFRVSAIIVCLLCELLSSS
Sbjct: 1 MLQQDSNDDTEDVSLFDAEEETTNRPRKAKIRHPVASFFHLFFRVSAIIVCLLCELLSSS 60
Query: 61 FITCMVTIILLLSCDFWAVKNVTGRLMVGLRWWNHIDEDGKSHWVFESRKESSQENKTVS 120
FITCMVTIILLLSCDFWAVKNVTGRLMVGLRWWNHIDEDGKSHWVFESRKESSQENKTVS
Sbjct: 61 FITCMVTIILLLSCDFWAVKNVTGRLMVGLRWWNHIDEDGKSHWVFESRKESSQENKTVS 120
Query: 121 EAESRIFWLGLIACSVLWVIFAFSALFSFTVKWL 154
EAESRIFWLGLIACSVLWVIFAFSALFSFTVKWL
Sbjct: 121 EAESRIFWLGLIACSVLWVIFAFSALFSFTVKWL 154
>gi|148747574 hypothetical protein LOC51030 [Homo sapiens]
Length = 205
Score = 306 bits (783), Expect = 2e-83
Identities = 150/154 (97%), Positives = 150/154 (97%)
Query: 1 MLQQDSNDDTEDVSLFDAEEETTNRPRKAKIRHPVASFFHLFFRVSAIIVCLLCELLSSS 60
MLQQDSNDDTEDVSLFDAEEETTNRPRKAKIRHPVASFFHLFFRVSAIIV LLC LLSSS
Sbjct: 1 MLQQDSNDDTEDVSLFDAEEETTNRPRKAKIRHPVASFFHLFFRVSAIIVYLLCGLLSSS 60
Query: 61 FITCMVTIILLLSCDFWAVKNVTGRLMVGLRWWNHIDEDGKSHWVFESRKESSQENKTVS 120
FITCMVTIILLLSCDFWAVKNVTGRLMVGLRWWNHIDEDGKSHWVFESRKESSQENKTVS
Sbjct: 61 FITCMVTIILLLSCDFWAVKNVTGRLMVGLRWWNHIDEDGKSHWVFESRKESSQENKTVS 120
Query: 121 EAESRIFWLGLIACSVLWVIFAFSALFSFTVKWL 154
EAESRIFWLGLIAC VLWVIFAFSALFSF VKWL
Sbjct: 121 EAESRIFWLGLIACPVLWVIFAFSALFSFRVKWL 154
>gi|118421083 hypothetical protein LOC780776 [Homo sapiens]
Length = 213
Score = 199 bits (506), Expect = 2e-51
Identities = 97/154 (62%), Positives = 119/154 (77%), Gaps = 4/154 (2%)
Query: 2 LQQDSNDDTEDVSL-FDAEEETTNRPRKAKIRHPVASFFHLFFRVSAIIVCLLCELLSSS 60
++Q DDTEDVSL F EEE R KAKIRHP+A+FFHLFFRVSAI+ + C+ S S
Sbjct: 1 MKQALVDDTEDVSLDFGNEEELAFR--KAKIRHPLATFFHLFFRVSAIVTYVSCDWFSKS 58
Query: 61 FITCMVTIILLLSCDFWAVKNVTGRLMVGLRWWNHIDEDGKSHWVFESRKESSQENKTVS 120
F+ C V ++LLLS DFW+VKNVTGRL+VGLRWWN IDEDGKSHW+FE+RK S + +
Sbjct: 59 FVGCFVMVLLLLSLDFWSVKNVTGRLLVGLRWWNQIDEDGKSHWIFEARK-VSPNSIAAT 117
Query: 121 EAESRIFWLGLIACSVLWVIFAFSALFSFTVKWL 154
EAE+RIFWLGLI C ++W++F FS LFS +KWL
Sbjct: 118 EAEARIFWLGLIICPMIWIVFFFSTLFSLKLKWL 151
>gi|28212280 hypothetical protein LOC283579 [Homo sapiens]
Length = 122
Score = 49.3 bits (116), Expect = 4e-06
Identities = 23/33 (69%), Positives = 27/33 (81%)
Query: 157 SRHIAQTGLKVLGSRDPPASAFQSAGITGVSRC 189
S + AQ GL++LGS +PPASA QSAGITGVS C
Sbjct: 33 SHYFAQAGLELLGSSNPPASASQSAGITGVSHC 65
>gi|62243734 signal transducing adaptor family member 2 isoform 1
[Homo sapiens]
Length = 449
Score = 45.1 bits (105), Expect = 7e-05
Identities = 21/29 (72%), Positives = 24/29 (82%)
Query: 159 HIAQTGLKVLGSRDPPASAFQSAGITGVS 187
H+AQ GL++L S DPP SA QSAGITGVS
Sbjct: 364 HVAQAGLELLTSSDPPTSASQSAGITGVS 392
>gi|237858668 hypothetical protein LOC123207 isoform d [Homo
sapiens]
Length = 167
Score = 42.0 bits (97), Expect = 6e-04
Identities = 22/31 (70%), Positives = 25/31 (80%)
Query: 157 SRHIAQTGLKVLGSRDPPASAFQSAGITGVS 187
S +IAQ GL++L S D PASA QSAGITGVS
Sbjct: 125 SCYIAQAGLELLASSDLPASASQSAGITGVS 155
>gi|224494572 hypothetical protein LOC401082 [Homo sapiens]
Length = 95
Score = 41.6 bits (96), Expect = 8e-04
Identities = 17/33 (51%), Positives = 25/33 (75%)
Query: 157 SRHIAQTGLKVLGSRDPPASAFQSAGITGVSRC 189
S ++AQ GL++LGS + P SA+Q+AG TG+ C
Sbjct: 17 SHYVAQAGLELLGSSNSPTSAYQAAGTTGLHHC 49
>gi|169216486 PREDICTED: hCG_1742852 [Homo sapiens]
Length = 402
Score = 41.6 bits (96), Expect = 8e-04
Identities = 20/29 (68%), Positives = 23/29 (79%)
Query: 159 HIAQTGLKVLGSRDPPASAFQSAGITGVS 187
H+ Q GL++L S DPP SA QSAGITGVS
Sbjct: 360 HVDQAGLELLISGDPPTSASQSAGITGVS 388
>gi|169216528 PREDICTED: hCG_1742852 [Homo sapiens]
Length = 402
Score = 41.6 bits (96), Expect = 8e-04
Identities = 20/29 (68%), Positives = 23/29 (79%)
Query: 159 HIAQTGLKVLGSRDPPASAFQSAGITGVS 187
H+ Q GL++L S DPP SA QSAGITGVS
Sbjct: 360 HVDQAGLELLISGDPPTSASQSAGITGVS 388
>gi|239747074 PREDICTED: hypothetical protein XP_002343911 [Homo
sapiens]
Length = 402
Score = 40.4 bits (93), Expect = 0.002
Identities = 19/29 (65%), Positives = 23/29 (79%)
Query: 159 HIAQTGLKVLGSRDPPASAFQSAGITGVS 187
H+ Q GL++L S DPP SA QSAGITGV+
Sbjct: 360 HVDQAGLELLISGDPPTSASQSAGITGVT 388
>gi|169216761 PREDICTED: hCG_1742852 [Homo sapiens]
Length = 402
Score = 40.4 bits (93), Expect = 0.002
Identities = 19/29 (65%), Positives = 23/29 (79%)
Query: 159 HIAQTGLKVLGSRDPPASAFQSAGITGVS 187
H+ Q GL++L S DPP SA QSAGITGV+
Sbjct: 360 HVDQAGLELLISGDPPTSASQSAGITGVT 388
>gi|194473995 zinc finger protein 195 isoform 2 [Homo sapiens]
Length = 606
Score = 40.4 bits (93), Expect = 0.002
Identities = 23/51 (45%), Positives = 32/51 (62%), Gaps = 4/51 (7%)
Query: 159 HIAQTGLKVLGSRDPPASAFQSAGITGVSRCPGHPSRKFHQVDINSFTRIT 209
H Q L++LGS D PASA QSAGITGV+ H ++ V ++ FT ++
Sbjct: 81 HATQACLELLGSSDLPASASQSAGITGVN----HRAQPGLNVSVDKFTAMS 127
>gi|194473688 zinc finger protein 195 isoform 1 [Homo sapiens]
Length = 629
Score = 40.4 bits (93), Expect = 0.002
Identities = 23/50 (46%), Positives = 31/50 (62%), Gaps = 4/50 (8%)
Query: 159 HIAQTGLKVLGSRDPPASAFQSAGITGVSRCPGHPSRKFHQVDINSFTRI 208
H Q L++LGS D PASA QSAGITGV+ H ++ V ++ FT +
Sbjct: 81 HATQACLELLGSSDLPASASQSAGITGVN----HRAQPGLNVSVDKFTAL 126
>gi|54112407 protein kinase CHK2 isoform c [Homo sapiens]
Length = 586
Score = 40.0 bits (92), Expect = 0.002
Identities = 20/34 (58%), Positives = 24/34 (70%)
Query: 157 SRHIAQTGLKVLGSRDPPASAFQSAGITGVSRCP 190
S H+ Q+ L++L S DPPASA QSAGI GV P
Sbjct: 110 SGHVTQSDLELLLSSDPPASASQSAGIRGVRHHP 143
>gi|169213800 PREDICTED: hypothetical protein [Homo sapiens]
Length = 142
Score = 39.3 bits (90), Expect = 0.004
Identities = 18/29 (62%), Positives = 22/29 (75%)
Query: 159 HIAQTGLKVLGSRDPPASAFQSAGITGVS 187
H+ Q GL++L S DPP SA Q+A ITGVS
Sbjct: 5 HVGQAGLELLTSSDPPTSASQNAEITGVS 33
>gi|169214229 PREDICTED: hypothetical protein [Homo sapiens]
Length = 142
Score = 39.3 bits (90), Expect = 0.004
Identities = 18/29 (62%), Positives = 22/29 (75%)
Query: 159 HIAQTGLKVLGSRDPPASAFQSAGITGVS 187
H+ Q GL++L S DPP SA Q+A ITGVS
Sbjct: 5 HVGQAGLELLTSSDPPTSASQNAEITGVS 33
>gi|169213573 PREDICTED: hypothetical protein [Homo sapiens]
Length = 142
Score = 39.3 bits (90), Expect = 0.004
Identities = 18/29 (62%), Positives = 22/29 (75%)
Query: 159 HIAQTGLKVLGSRDPPASAFQSAGITGVS 187
H+ Q GL++L S DPP SA Q+A ITGVS
Sbjct: 5 HVGQAGLELLTSSDPPTSASQNAEITGVS 33
>gi|63999355 chromosome 9 open reading frame 37 [Homo sapiens]
Length = 176
Score = 38.9 bits (89), Expect = 0.005
Identities = 29/78 (37%), Positives = 40/78 (51%), Gaps = 20/78 (25%)
Query: 159 HIAQTGLKVLGSRDPPASAFQSAGITGVSRCPGHPSR--KFHQVDINSFTRITDRALY-- 214
++AQ L++L S +PPASA QS GITG S H +R H +D ++TD+ +
Sbjct: 5 YVAQADLELLTSSNPPASASQSTGITGGS----HRARPGPVHFID-----KVTDKPSHSH 55
Query: 215 -------WKPAPRLSSPP 225
W P SSPP
Sbjct: 56 PFALKENWNLNPEPSSPP 73
>gi|239751420 PREDICTED: similar to hCG2039376 [Homo sapiens]
Length = 858
Score = 37.7 bits (86), Expect = 0.011
Identities = 18/30 (60%), Positives = 22/30 (73%)
Query: 160 IAQTGLKVLGSRDPPASAFQSAGITGVSRC 189
+AQ GL++L S P A A QSAGITG+S C
Sbjct: 701 VAQAGLELLVSSSPSALASQSAGITGMSHC 730
>gi|57529246 ubiquitin thioesterase 19 [Homo sapiens]
Length = 1318
Score = 37.7 bits (86), Expect = 0.011
Identities = 18/29 (62%), Positives = 22/29 (75%)
Query: 157 SRHIAQTGLKVLGSRDPPASAFQSAGITG 185
SR++AQ GL+ L S DP ASA +AGITG
Sbjct: 45 SRYVAQAGLEPLASGDPSASASHAAGITG 73
>gi|29029530 sulfotransferase family, cytosolic, 1C, member 1
isoform b [Homo sapiens]
Length = 307
Score = 37.0 bits (84), Expect = 0.019
Identities = 17/26 (65%), Positives = 20/26 (76%)
Query: 159 HIAQTGLKVLGSRDPPASAFQSAGIT 184
H+AQ GLK+L S +PPAS QSA IT
Sbjct: 98 HVAQAGLKLLSSSNPPASTSQSAKIT 123
>gi|8922871 oleoyl-ACP hydrolase isoform 1 [Homo sapiens]
Length = 318
Score = 37.0 bits (84), Expect = 0.019
Identities = 17/34 (50%), Positives = 23/34 (67%)
Query: 157 SRHIAQTGLKVLGSRDPPASAFQSAGITGVSRCP 190
S H+A+ GLK+ S DPPASA+ AG++ R P
Sbjct: 58 SHHVAKAGLKLRRSSDPPASAYPCAGVSHRRREP 91
>gi|4506473 v-rel reticuloendotheliosis viral oncogene homolog [Homo
sapiens]
Length = 619
Score = 36.2 bits (82), Expect = 0.032
Identities = 17/27 (62%), Positives = 20/27 (74%)
Query: 158 RHIAQTGLKVLGSRDPPASAFQSAGIT 184
RH+ Q GL++L S DPP A QSAGIT
Sbjct: 313 RHVDQDGLELLTSGDPPTLASQSAGIT 339
>gi|239048907 checkpoint with forkhead and ring finger domains
isoform 4 [Homo sapiens]
Length = 623
Score = 35.8 bits (81), Expect = 0.042
Identities = 17/26 (65%), Positives = 19/26 (73%)
Query: 160 IAQTGLKVLGSRDPPASAFQSAGITG 185
+AQ GLK+LGS DPP A QS ITG
Sbjct: 141 VAQAGLKLLGSSDPPTLASQSIVITG 166
>gi|217035093 cyclic nucleotide gated channel alpha 1 isoform 1
[Homo sapiens]
Length = 759
Score = 34.7 bits (78), Expect = 0.093
Identities = 20/42 (47%), Positives = 25/42 (59%), Gaps = 2/42 (4%)
Query: 143 FSALFSFTVKWLRRSRHIAQTGLKVLGSRDPPASAFQSAGIT 184
F +F F V+ H+ Q GL++L S D P SA QSAGIT
Sbjct: 29 FQLIFVFLVEM--GFHHVGQAGLELLISSDLPTSASQSAGIT 68
>gi|148839316 NIMA-related kinase 4 [Homo sapiens]
Length = 841
Score = 34.3 bits (77), Expect = 0.12
Identities = 16/27 (59%), Positives = 21/27 (77%)
Query: 160 IAQTGLKVLGSRDPPASAFQSAGITGV 186
+A + L++LGS D PASA + AGITGV
Sbjct: 471 LAHSNLRLLGSSDSPASASRVAGITGV 497
>gi|195963398 suppressor of G2 allele of SKP1 isoform a [Homo
sapiens]
Length = 365
Score = 34.3 bits (77), Expect = 0.12
Identities = 16/26 (61%), Positives = 19/26 (73%)
Query: 160 IAQTGLKVLGSRDPPASAFQSAGITG 185
+ Q GL++L S DPPA QSAGITG
Sbjct: 117 VGQAGLQLLTSSDPPALDSQSAGITG 142
>gi|239751535 PREDICTED: hypothetical protein [Homo sapiens]
Length = 255
Score = 33.9 bits (76), Expect = 0.16
Identities = 31/90 (34%), Positives = 38/90 (42%), Gaps = 16/90 (17%)
Query: 175 ASAFQSAGITGVSRCPGHPSR---KFHQVDINSFTRITDRALYWKPAPRLSSPPLRAAPG 231
ASA + G V PG P R F ++ TR+ R+ PAPRL P RA+PG
Sbjct: 97 ASARSAQGSRDVPAGPGFPPRLPRPFTSASFSNQTRLRRRSASALPAPRLC--PQRASPG 154
Query: 232 NCQQMAPARLFLSLRLWAWRGGGESPNSRG 261
C GGG SP +RG
Sbjct: 155 -CSSPGV----------RGPGGGASPRARG 173
>gi|239746046 PREDICTED: hypothetical protein XP_002343643 [Homo
sapiens]
Length = 255
Score = 33.9 bits (76), Expect = 0.16
Identities = 31/90 (34%), Positives = 38/90 (42%), Gaps = 16/90 (17%)
Query: 175 ASAFQSAGITGVSRCPGHPSR---KFHQVDINSFTRITDRALYWKPAPRLSSPPLRAAPG 231
ASA + G V PG P R F ++ TR+ R+ PAPRL P RA+PG
Sbjct: 97 ASARSAQGSRDVPAGPGFPPRLPRPFTSASFSNQTRLRRRSASALPAPRLC--PQRASPG 154
Query: 232 NCQQMAPARLFLSLRLWAWRGGGESPNSRG 261
C GGG SP +RG
Sbjct: 155 -CSSPGV----------RGPGGGASPRARG 173
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.323 0.135 0.440
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,688,537
Number of Sequences: 37866
Number of extensions: 550891
Number of successful extensions: 2188
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 56
Number of HSP's successfully gapped in prelim test: 16
Number of HSP's that attempted gapping in prelim test: 2120
Number of HSP's gapped (non-prelim): 77
length of query: 276
length of database: 18,247,518
effective HSP length: 101
effective length of query: 175
effective length of database: 14,423,052
effective search space: 2524034100
effective search space used: 2524034100
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.