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Search of human proteins with 20070356
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|20070356 numb homolog isoform 3 [Homo sapiens]
(640 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|20070356 numb homolog isoform 3 [Homo sapiens] 1300 0.0
gi|54144625 numb homolog isoform 1 [Homo sapiens] 1291 0.0
gi|54144629 numb homolog isoform 4 [Homo sapiens] 1179 0.0
gi|54144627 numb homolog isoform 2 [Homo sapiens] 1170 0.0
gi|10863899 numb homolog (Drosophila)-like [Homo sapiens] 574 e-164
gi|7705318 GULP, engulfment adaptor PTB domain containing 1 [Hom... 82 2e-15
gi|132626790 low density lipoprotein receptor adaptor protein 1 ... 77 4e-14
gi|50511947 cajalin 2 isoform b [Homo sapiens] 59 1e-08
gi|50511945 cajalin 2 isoform a [Homo sapiens] 59 1e-08
gi|10047134 cajalin 2 isoform c [Homo sapiens] 59 1e-08
gi|33350928 disabled homolog 1 [Homo sapiens] 57 4e-08
gi|149773456 hypothetical protein LOC643314 [Homo sapiens] 57 5e-08
gi|140161500 ankyrin repeat and sterile alpha motif domain conta... 56 9e-08
gi|31317301 nitric oxide synthase 1 (neuronal) adaptor protein i... 51 3e-06
gi|239743232 PREDICTED: hypothetical protein XP_002342775 [Homo ... 51 4e-06
gi|148491082 disabled homolog 2 [Homo sapiens] 50 5e-06
gi|26051278 nuclear pore membrane protein 121 [Homo sapiens] 50 6e-06
gi|19111150 angiomotin isoform 2 [Homo sapiens] 49 1e-05
gi|166064029 angiomotin isoform 1 [Homo sapiens] 49 1e-05
gi|146219843 Snf2-related CBP activator protein [Homo sapiens] 48 2e-05
gi|150378545 POM121 membrane glycoprotein (rat)-like [Homo sapiens] 47 5e-05
gi|21327715 transcription elongation regulator 1 isoform 1 [Homo... 46 9e-05
gi|91208420 bassoon protein [Homo sapiens] 45 2e-04
gi|189181724 proteoglycan 4 isoform D [Homo sapiens] 44 5e-04
gi|189181722 proteoglycan 4 isoform C [Homo sapiens] 44 5e-04
gi|189181720 proteoglycan 4 isoform B [Homo sapiens] 44 5e-04
gi|67190163 proteoglycan 4 isoform A [Homo sapiens] 44 5e-04
gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 44 5e-04
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 44 5e-04
gi|91208418 transcription elongation regulator 1 isoform 2 [Homo... 44 5e-04
>gi|20070356 numb homolog isoform 3 [Homo sapiens]
Length = 640
Score = 1300 bits (3364), Expect = 0.0
Identities = 640/640 (100%), Positives = 640/640 (100%)
Query: 1 MNKLRQSFRRKKDVYVPEASRPHQWQTDEEGVRTGKCSFPVKYLGHVEVDESRGMHICED 60
MNKLRQSFRRKKDVYVPEASRPHQWQTDEEGVRTGKCSFPVKYLGHVEVDESRGMHICED
Sbjct: 1 MNKLRQSFRRKKDVYVPEASRPHQWQTDEEGVRTGKCSFPVKYLGHVEVDESRGMHICED 60
Query: 61 AVKRLKATGKKAVKAVLWVSADGLRVVDEKTKDLIVDQTIEKVSFCAPDRNFDRAFSYIC 120
AVKRLKATGKKAVKAVLWVSADGLRVVDEKTKDLIVDQTIEKVSFCAPDRNFDRAFSYIC
Sbjct: 61 AVKRLKATGKKAVKAVLWVSADGLRVVDEKTKDLIVDQTIEKVSFCAPDRNFDRAFSYIC 120
Query: 121 RDGTTRRWICHCFMAVKDTGERLSHAVGCAFAACLERKQKREKECGVTATFDASRTTFTR 180
RDGTTRRWICHCFMAVKDTGERLSHAVGCAFAACLERKQKREKECGVTATFDASRTTFTR
Sbjct: 121 RDGTTRRWICHCFMAVKDTGERLSHAVGCAFAACLERKQKREKECGVTATFDASRTTFTR 180
Query: 181 EGSFRVTTATEQAEREEIMKQMQDAKKAETDKIVVGSSVAPGNTAPSPSSPTSPTSDATT 240
EGSFRVTTATEQAEREEIMKQMQDAKKAETDKIVVGSSVAPGNTAPSPSSPTSPTSDATT
Sbjct: 181 EGSFRVTTATEQAEREEIMKQMQDAKKAETDKIVVGSSVAPGNTAPSPSSPTSPTSDATT 240
Query: 241 SLEMNNPHAIPRRHAPIEQLARQGSFRGFPALSQKMSPFKRQLSLRINELPSTMQRKTDF 300
SLEMNNPHAIPRRHAPIEQLARQGSFRGFPALSQKMSPFKRQLSLRINELPSTMQRKTDF
Sbjct: 241 SLEMNNPHAIPRRHAPIEQLARQGSFRGFPALSQKMSPFKRQLSLRINELPSTMQRKTDF 300
Query: 301 PIKNAVPEVEGEAESISSLCSQITNAFSTPEDPFSSAPMTKPVTVVAPQSPTFQANGTDS 360
PIKNAVPEVEGEAESISSLCSQITNAFSTPEDPFSSAPMTKPVTVVAPQSPTFQANGTDS
Sbjct: 301 PIKNAVPEVEGEAESISSLCSQITNAFSTPEDPFSSAPMTKPVTVVAPQSPTFQANGTDS 360
Query: 361 AFHVLAKPAHTALAPVAMPVRETNPWAHAPDAANKEIAATCSGTEWGQSSGAASPGLFQA 420
AFHVLAKPAHTALAPVAMPVRETNPWAHAPDAANKEIAATCSGTEWGQSSGAASPGLFQA
Sbjct: 361 AFHVLAKPAHTALAPVAMPVRETNPWAHAPDAANKEIAATCSGTEWGQSSGAASPGLFQA 420
Query: 421 GHRRTPSEADRWLEEVSKSVRAQQPQASAAPLQPVLQPPPPTAISQPASPFQGNAFLTSQ 480
GHRRTPSEADRWLEEVSKSVRAQQPQASAAPLQPVLQPPPPTAISQPASPFQGNAFLTSQ
Sbjct: 421 GHRRTPSEADRWLEEVSKSVRAQQPQASAAPLQPVLQPPPPTAISQPASPFQGNAFLTSQ 480
Query: 481 PVPVGVVPALQPAFVPAQSYPVANGMPYPAPNVPVVGITPSQMVANVFGTAGHPQAAHPH 540
PVPVGVVPALQPAFVPAQSYPVANGMPYPAPNVPVVGITPSQMVANVFGTAGHPQAAHPH
Sbjct: 481 PVPVGVVPALQPAFVPAQSYPVANGMPYPAPNVPVVGITPSQMVANVFGTAGHPQAAHPH 540
Query: 541 QSPSLVRQQTFPHYEASSATTSPFFKPPAQHLNGSAAFNGVDDGRLASADRHTEVPTGTC 600
QSPSLVRQQTFPHYEASSATTSPFFKPPAQHLNGSAAFNGVDDGRLASADRHTEVPTGTC
Sbjct: 541 QSPSLVRQQTFPHYEASSATTSPFFKPPAQHLNGSAAFNGVDDGRLASADRHTEVPTGTC 600
Query: 601 PVDPFEAQWAALENKSKQRTNPSPTNPFSSDLQKTFEIEL 640
PVDPFEAQWAALENKSKQRTNPSPTNPFSSDLQKTFEIEL
Sbjct: 601 PVDPFEAQWAALENKSKQRTNPSPTNPFSSDLQKTFEIEL 640
>gi|54144625 numb homolog isoform 1 [Homo sapiens]
Length = 651
Score = 1291 bits (3342), Expect = 0.0
Identities = 640/651 (98%), Positives = 640/651 (98%), Gaps = 11/651 (1%)
Query: 1 MNKLRQSFRRKKDVYVPEASRPHQWQTDEEGVRTGKCSFPVKYLGHVEVDESRGMHICED 60
MNKLRQSFRRKKDVYVPEASRPHQWQTDEEGVRTGKCSFPVKYLGHVEVDESRGMHICED
Sbjct: 1 MNKLRQSFRRKKDVYVPEASRPHQWQTDEEGVRTGKCSFPVKYLGHVEVDESRGMHICED 60
Query: 61 AVKRLKA-----------TGKKAVKAVLWVSADGLRVVDEKTKDLIVDQTIEKVSFCAPD 109
AVKRLKA TGKKAVKAVLWVSADGLRVVDEKTKDLIVDQTIEKVSFCAPD
Sbjct: 61 AVKRLKAERKFFKGFFGKTGKKAVKAVLWVSADGLRVVDEKTKDLIVDQTIEKVSFCAPD 120
Query: 110 RNFDRAFSYICRDGTTRRWICHCFMAVKDTGERLSHAVGCAFAACLERKQKREKECGVTA 169
RNFDRAFSYICRDGTTRRWICHCFMAVKDTGERLSHAVGCAFAACLERKQKREKECGVTA
Sbjct: 121 RNFDRAFSYICRDGTTRRWICHCFMAVKDTGERLSHAVGCAFAACLERKQKREKECGVTA 180
Query: 170 TFDASRTTFTREGSFRVTTATEQAEREEIMKQMQDAKKAETDKIVVGSSVAPGNTAPSPS 229
TFDASRTTFTREGSFRVTTATEQAEREEIMKQMQDAKKAETDKIVVGSSVAPGNTAPSPS
Sbjct: 181 TFDASRTTFTREGSFRVTTATEQAEREEIMKQMQDAKKAETDKIVVGSSVAPGNTAPSPS 240
Query: 230 SPTSPTSDATTSLEMNNPHAIPRRHAPIEQLARQGSFRGFPALSQKMSPFKRQLSLRINE 289
SPTSPTSDATTSLEMNNPHAIPRRHAPIEQLARQGSFRGFPALSQKMSPFKRQLSLRINE
Sbjct: 241 SPTSPTSDATTSLEMNNPHAIPRRHAPIEQLARQGSFRGFPALSQKMSPFKRQLSLRINE 300
Query: 290 LPSTMQRKTDFPIKNAVPEVEGEAESISSLCSQITNAFSTPEDPFSSAPMTKPVTVVAPQ 349
LPSTMQRKTDFPIKNAVPEVEGEAESISSLCSQITNAFSTPEDPFSSAPMTKPVTVVAPQ
Sbjct: 301 LPSTMQRKTDFPIKNAVPEVEGEAESISSLCSQITNAFSTPEDPFSSAPMTKPVTVVAPQ 360
Query: 350 SPTFQANGTDSAFHVLAKPAHTALAPVAMPVRETNPWAHAPDAANKEIAATCSGTEWGQS 409
SPTFQANGTDSAFHVLAKPAHTALAPVAMPVRETNPWAHAPDAANKEIAATCSGTEWGQS
Sbjct: 361 SPTFQANGTDSAFHVLAKPAHTALAPVAMPVRETNPWAHAPDAANKEIAATCSGTEWGQS 420
Query: 410 SGAASPGLFQAGHRRTPSEADRWLEEVSKSVRAQQPQASAAPLQPVLQPPPPTAISQPAS 469
SGAASPGLFQAGHRRTPSEADRWLEEVSKSVRAQQPQASAAPLQPVLQPPPPTAISQPAS
Sbjct: 421 SGAASPGLFQAGHRRTPSEADRWLEEVSKSVRAQQPQASAAPLQPVLQPPPPTAISQPAS 480
Query: 470 PFQGNAFLTSQPVPVGVVPALQPAFVPAQSYPVANGMPYPAPNVPVVGITPSQMVANVFG 529
PFQGNAFLTSQPVPVGVVPALQPAFVPAQSYPVANGMPYPAPNVPVVGITPSQMVANVFG
Sbjct: 481 PFQGNAFLTSQPVPVGVVPALQPAFVPAQSYPVANGMPYPAPNVPVVGITPSQMVANVFG 540
Query: 530 TAGHPQAAHPHQSPSLVRQQTFPHYEASSATTSPFFKPPAQHLNGSAAFNGVDDGRLASA 589
TAGHPQAAHPHQSPSLVRQQTFPHYEASSATTSPFFKPPAQHLNGSAAFNGVDDGRLASA
Sbjct: 541 TAGHPQAAHPHQSPSLVRQQTFPHYEASSATTSPFFKPPAQHLNGSAAFNGVDDGRLASA 600
Query: 590 DRHTEVPTGTCPVDPFEAQWAALENKSKQRTNPSPTNPFSSDLQKTFEIEL 640
DRHTEVPTGTCPVDPFEAQWAALENKSKQRTNPSPTNPFSSDLQKTFEIEL
Sbjct: 601 DRHTEVPTGTCPVDPFEAQWAALENKSKQRTNPSPTNPFSSDLQKTFEIEL 651
>gi|54144629 numb homolog isoform 4 [Homo sapiens]
Length = 592
Score = 1179 bits (3050), Expect = 0.0
Identities = 592/640 (92%), Positives = 592/640 (92%), Gaps = 48/640 (7%)
Query: 1 MNKLRQSFRRKKDVYVPEASRPHQWQTDEEGVRTGKCSFPVKYLGHVEVDESRGMHICED 60
MNKLRQSFRRKKDVYVPEASRPHQWQTDEEGVRTGKCSFPVKYLGHVEVDESRGMHICED
Sbjct: 1 MNKLRQSFRRKKDVYVPEASRPHQWQTDEEGVRTGKCSFPVKYLGHVEVDESRGMHICED 60
Query: 61 AVKRLKATGKKAVKAVLWVSADGLRVVDEKTKDLIVDQTIEKVSFCAPDRNFDRAFSYIC 120
AVKRLKATGKKAVKAVLWVSADGLRVVDEKTKDLIVDQTIEKVSFCAPDRNFDRAFSYIC
Sbjct: 61 AVKRLKATGKKAVKAVLWVSADGLRVVDEKTKDLIVDQTIEKVSFCAPDRNFDRAFSYIC 120
Query: 121 RDGTTRRWICHCFMAVKDTGERLSHAVGCAFAACLERKQKREKECGVTATFDASRTTFTR 180
RDGTTRRWICHCFMAVKDTGERLSHAVGCAFAACLERKQKREKECGVTATFDASRTTFTR
Sbjct: 121 RDGTTRRWICHCFMAVKDTGERLSHAVGCAFAACLERKQKREKECGVTATFDASRTTFTR 180
Query: 181 EGSFRVTTATEQAEREEIMKQMQDAKKAETDKIVVGSSVAPGNTAPSPSSPTSPTSDATT 240
EGSFRVTTATEQAEREEIMKQMQDAKKAETDKIVVGSSVAPGNTAPSPSSPTSPTSDATT
Sbjct: 181 EGSFRVTTATEQAEREEIMKQMQDAKKAETDKIVVGSSVAPGNTAPSPSSPTSPTSDATT 240
Query: 241 SLEMNNPHAIPRRHAPIEQLARQGSFRGFPALSQKMSPFKRQLSLRINELPSTMQRKTDF 300
SLEMNNPHAIPRRHAPIEQLARQGSFRGFPALSQKMSPFKRQLSLRINELPSTMQRKTDF
Sbjct: 241 SLEMNNPHAIPRRHAPIEQLARQGSFRGFPALSQKMSPFKRQLSLRINELPSTMQRKTDF 300
Query: 301 PIKNAVPEVEGEAESISSLCSQITNAFSTPEDPFSSAPMTKPVTVVAPQSPTFQANGTDS 360
PIKNAVPEVEGEAESISSLCSQITNAFSTPEDPFSSAPMTKPVTVVAPQSPTFQ
Sbjct: 301 PIKNAVPEVEGEAESISSLCSQITNAFSTPEDPFSSAPMTKPVTVVAPQSPTFQ------ 354
Query: 361 AFHVLAKPAHTALAPVAMPVRETNPWAHAPDAANKEIAATCSGTEWGQSSGAASPGLFQA 420
GTEWGQSSGAASPGLFQA
Sbjct: 355 ------------------------------------------GTEWGQSSGAASPGLFQA 372
Query: 421 GHRRTPSEADRWLEEVSKSVRAQQPQASAAPLQPVLQPPPPTAISQPASPFQGNAFLTSQ 480
GHRRTPSEADRWLEEVSKSVRAQQPQASAAPLQPVLQPPPPTAISQPASPFQGNAFLTSQ
Sbjct: 373 GHRRTPSEADRWLEEVSKSVRAQQPQASAAPLQPVLQPPPPTAISQPASPFQGNAFLTSQ 432
Query: 481 PVPVGVVPALQPAFVPAQSYPVANGMPYPAPNVPVVGITPSQMVANVFGTAGHPQAAHPH 540
PVPVGVVPALQPAFVPAQSYPVANGMPYPAPNVPVVGITPSQMVANVFGTAGHPQAAHPH
Sbjct: 433 PVPVGVVPALQPAFVPAQSYPVANGMPYPAPNVPVVGITPSQMVANVFGTAGHPQAAHPH 492
Query: 541 QSPSLVRQQTFPHYEASSATTSPFFKPPAQHLNGSAAFNGVDDGRLASADRHTEVPTGTC 600
QSPSLVRQQTFPHYEASSATTSPFFKPPAQHLNGSAAFNGVDDGRLASADRHTEVPTGTC
Sbjct: 493 QSPSLVRQQTFPHYEASSATTSPFFKPPAQHLNGSAAFNGVDDGRLASADRHTEVPTGTC 552
Query: 601 PVDPFEAQWAALENKSKQRTNPSPTNPFSSDLQKTFEIEL 640
PVDPFEAQWAALENKSKQRTNPSPTNPFSSDLQKTFEIEL
Sbjct: 553 PVDPFEAQWAALENKSKQRTNPSPTNPFSSDLQKTFEIEL 592
>gi|54144627 numb homolog isoform 2 [Homo sapiens]
Length = 603
Score = 1170 bits (3028), Expect = 0.0
Identities = 592/651 (90%), Positives = 592/651 (90%), Gaps = 59/651 (9%)
Query: 1 MNKLRQSFRRKKDVYVPEASRPHQWQTDEEGVRTGKCSFPVKYLGHVEVDESRGMHICED 60
MNKLRQSFRRKKDVYVPEASRPHQWQTDEEGVRTGKCSFPVKYLGHVEVDESRGMHICED
Sbjct: 1 MNKLRQSFRRKKDVYVPEASRPHQWQTDEEGVRTGKCSFPVKYLGHVEVDESRGMHICED 60
Query: 61 AVKRLKA-----------TGKKAVKAVLWVSADGLRVVDEKTKDLIVDQTIEKVSFCAPD 109
AVKRLKA TGKKAVKAVLWVSADGLRVVDEKTKDLIVDQTIEKVSFCAPD
Sbjct: 61 AVKRLKAERKFFKGFFGKTGKKAVKAVLWVSADGLRVVDEKTKDLIVDQTIEKVSFCAPD 120
Query: 110 RNFDRAFSYICRDGTTRRWICHCFMAVKDTGERLSHAVGCAFAACLERKQKREKECGVTA 169
RNFDRAFSYICRDGTTRRWICHCFMAVKDTGERLSHAVGCAFAACLERKQKREKECGVTA
Sbjct: 121 RNFDRAFSYICRDGTTRRWICHCFMAVKDTGERLSHAVGCAFAACLERKQKREKECGVTA 180
Query: 170 TFDASRTTFTREGSFRVTTATEQAEREEIMKQMQDAKKAETDKIVVGSSVAPGNTAPSPS 229
TFDASRTTFTREGSFRVTTATEQAEREEIMKQMQDAKKAETDKIVVGSSVAPGNTAPSPS
Sbjct: 181 TFDASRTTFTREGSFRVTTATEQAEREEIMKQMQDAKKAETDKIVVGSSVAPGNTAPSPS 240
Query: 230 SPTSPTSDATTSLEMNNPHAIPRRHAPIEQLARQGSFRGFPALSQKMSPFKRQLSLRINE 289
SPTSPTSDATTSLEMNNPHAIPRRHAPIEQLARQGSFRGFPALSQKMSPFKRQLSLRINE
Sbjct: 241 SPTSPTSDATTSLEMNNPHAIPRRHAPIEQLARQGSFRGFPALSQKMSPFKRQLSLRINE 300
Query: 290 LPSTMQRKTDFPIKNAVPEVEGEAESISSLCSQITNAFSTPEDPFSSAPMTKPVTVVAPQ 349
LPSTMQRKTDFPIKNAVPEVEGEAESISSLCSQITNAFSTPEDPFSSAPMTKPVTVVAPQ
Sbjct: 301 LPSTMQRKTDFPIKNAVPEVEGEAESISSLCSQITNAFSTPEDPFSSAPMTKPVTVVAPQ 360
Query: 350 SPTFQANGTDSAFHVLAKPAHTALAPVAMPVRETNPWAHAPDAANKEIAATCSGTEWGQS 409
SPTFQ GTEWGQS
Sbjct: 361 SPTFQ------------------------------------------------GTEWGQS 372
Query: 410 SGAASPGLFQAGHRRTPSEADRWLEEVSKSVRAQQPQASAAPLQPVLQPPPPTAISQPAS 469
SGAASPGLFQAGHRRTPSEADRWLEEVSKSVRAQQPQASAAPLQPVLQPPPPTAISQPAS
Sbjct: 373 SGAASPGLFQAGHRRTPSEADRWLEEVSKSVRAQQPQASAAPLQPVLQPPPPTAISQPAS 432
Query: 470 PFQGNAFLTSQPVPVGVVPALQPAFVPAQSYPVANGMPYPAPNVPVVGITPSQMVANVFG 529
PFQGNAFLTSQPVPVGVVPALQPAFVPAQSYPVANGMPYPAPNVPVVGITPSQMVANVFG
Sbjct: 433 PFQGNAFLTSQPVPVGVVPALQPAFVPAQSYPVANGMPYPAPNVPVVGITPSQMVANVFG 492
Query: 530 TAGHPQAAHPHQSPSLVRQQTFPHYEASSATTSPFFKPPAQHLNGSAAFNGVDDGRLASA 589
TAGHPQAAHPHQSPSLVRQQTFPHYEASSATTSPFFKPPAQHLNGSAAFNGVDDGRLASA
Sbjct: 493 TAGHPQAAHPHQSPSLVRQQTFPHYEASSATTSPFFKPPAQHLNGSAAFNGVDDGRLASA 552
Query: 590 DRHTEVPTGTCPVDPFEAQWAALENKSKQRTNPSPTNPFSSDLQKTFEIEL 640
DRHTEVPTGTCPVDPFEAQWAALENKSKQRTNPSPTNPFSSDLQKTFEIEL
Sbjct: 553 DRHTEVPTGTCPVDPFEAQWAALENKSKQRTNPSPTNPFSSDLQKTFEIEL 603
>gi|10863899 numb homolog (Drosophila)-like [Homo sapiens]
Length = 609
Score = 574 bits (1480), Expect = e-164
Identities = 350/672 (52%), Positives = 405/672 (60%), Gaps = 136/672 (20%)
Query: 1 MNKLRQSFRRKKDVYVPEASRPHQWQTDEEGVRTGKCSFPVKYLGHVEVDESRGMHICED 60
MNKLRQS RR+K YVPEASRPHQWQ DE+ VR G CSFPV+YLGHVEV+ESRGMH+CED
Sbjct: 42 MNKLRQSLRRRKPAYVPEASRPHQWQADEDAVRKGTCSFPVRYLGHVEVEESRGMHVCED 101
Query: 61 AVKRLKATGKKAVKAVLWVSADGLRVVDEKTKDLIVDQTIEKVSFCAPDRNFDRAFSYIC 120
AVK+LKA G+K+VK+VLWVSADGLRVVD+KTKDL+VDQTIEKVSFCAPDRN D+AFSYIC
Sbjct: 102 AVKKLKAMGRKSVKSVLWVSADGLRVVDDKTKDLLVDQTIEKVSFCAPDRNLDKAFSYIC 161
Query: 121 RDGTTRRWICHCFMAVKDTGERLSHAVGCAFAACLERKQKREKECGVTATFDASRTTFTR 180
RDGTTRRWICHCF+A+KD+GERLSHAVGCAFAACLERKQ+REKECGVTA FDASRT+F R
Sbjct: 162 RDGTTRRWICHCFLALKDSGERLSHAVGCAFAACLERKQRREKECGVTAAFDASRTSFAR 221
Query: 181 EGSFRVTTATEQAEREEIMKQMQDAKKAETDKIVVGSSVAPGNTAPSPSSPTSPTSDATT 240
EGSFR++ AERE D KKAE +VAPG P SPT T+
Sbjct: 222 EGSFRLSGGGRPAERE-----APDKKKAEA---AAAPTVAPGPAQPGHVSPTPATTSPGE 273
Query: 241 SLEMNNP-------HAIPRRHAPIEQLARQGSFRGFPALSQKMSPFKRQLSLRINELPST 293
E P AIPRRHAP+EQL RQGSFRGFPALSQK SPFKRQLSLR+NELPST
Sbjct: 274 KGEAGTPVAAGTTAAAIPRRHAPLEQLVRQGSFRGFPALSQKNSPFKRQLSLRLNELPST 333
Query: 294 MQRKTDFPIKNAVPEVE----GEAESISSLCSQITNAFSTPEDPFSSAPMTKPVTVVAPQ 349
+QR+TDF +K VPE+E G+++SI++LC+QI+++F++ P AP P T
Sbjct: 334 LQRRTDFQVKGTVPEMEPPGAGDSDSINALCTQISSSFASAGAP---APGPPPAT----- 385
Query: 350 SPTFQANGTDSAFHVLAKPAHTALAPVAMPVRETNPWAHAPDAANKEIAATCSGTEWGQS 409
GT SA+ + P A P
Sbjct: 386 ------TGT-SAWGEPSVPPAAAFQP---------------------------------- 404
Query: 410 SGAASPGLFQAGHRRTPSEADRWLEEVSKSVRAQQPQ-----------------ASAAP- 451
GH+RTPSEA+RWLEEVS+ +AQQ Q AS AP
Sbjct: 405 -----------GHKRTPSEAERWLEEVSQVAKAQQQQQQQQQQQQQQQQQQQQAASVAPV 453
Query: 452 --LQPVLQPPPPTAISQPASPFQGNAFLTSQPVPVGVVPALQPAFVPAQSYPVANGMPY- 508
+ P LQP P A+P Q FL P +QP FVPA YP G+ Y
Sbjct: 454 PTMPPALQPFPAPVGPFDAAPAQVAVFLPP--------PHMQPPFVPA--YP---GLGYP 500
Query: 509 PAPNVPVVGITPSQMVANVFGTAGHPQAAHPHQSPSLVRQQTFPHYEASSATTSPFFKPP 568
P P VPVVGITPSQMVAN F +A Q P + L + FP SA S P
Sbjct: 501 PMPRVPVVGITPSQMVANAFCSAAQLQ---PQPATLLGKAGAFPPPAIPSAPGSQARPRP 557
Query: 569 AQHLNGSAAFNGVDDGRLASADRHTEVPTGTCPVDPFEAQWAALENKSKQRTNPSPTNPF 628
NG+ P +DPFEAQWAALE K+ T P+NPF
Sbjct: 558 ----NGAPW-------------PPEPAPAPAPELDPFEAQWAALEGKA---TVEKPSNPF 597
Query: 629 SSDLQKTFEIEL 640
S DLQKTFEIEL
Sbjct: 598 SGDLQKTFEIEL 609
>gi|7705318 GULP, engulfment adaptor PTB domain containing 1 [Homo
sapiens]
Length = 304
Score = 81.6 bits (200), Expect = 2e-15
Identities = 61/260 (23%), Positives = 124/260 (47%), Gaps = 34/260 (13%)
Query: 4 LRQSFRRKKDVYVPEASRPHQWQTDEEGVRTGKCSFPVKYLGHVEVDESRGMHICEDAVK 63
+ ++F RKKD W E + + K+LG EV++ +G + DAV+
Sbjct: 1 MNRAFSRKKD---------KTWMHTPEALSKHFIPYNAKFLGSTEVEQPKGTEVVRDAVR 51
Query: 64 RLK-------ATGKKAVKAVLWVSADGLRVVDEKTKDLIVDQTIEKVSFCAPDRNFDRAF 116
+LK + G+K K L +S G+++++ KTK++ + + ++SFCA D+ R F
Sbjct: 52 KLKFARHIKKSEGQKIPKVELQISIYGVKILEPKTKEVQHNCQLHRISFCADDKTDKRIF 111
Query: 117 SYICRDGTTRRWICHCFMAVKDTGERLSHAVGCAFAACLERKQKREKECGVTATFDASRT 176
++IC+D + + +C+ F + K E ++ +G AF + ++ E G +
Sbjct: 112 TFICKDSESNKHLCYVFDSEK-CAEEITLTIGQAF----DLAYRKFLESG-------GKD 159
Query: 177 TFTREGSFRVTTATEQAERE--EIMKQMQDAKKAETDKIVVGSSVAPGNTAPSPSSPTSP 234
TR+ + + E E E+ ++QD + +++ + AP + +P SP++
Sbjct: 160 VETRKQIAGLQKRIQDLETENMELKNKVQDLE----NQLRITQVSAPPAGSMTPKSPSTD 215
Query: 235 TSDATTSLEMNNPHAIPRRH 254
D +++ ++P R+
Sbjct: 216 IFDMIPFSPISHQSSMPTRN 235
>gi|132626790 low density lipoprotein receptor adaptor protein 1
[Homo sapiens]
Length = 308
Score = 77.4 bits (189), Expect = 4e-14
Identities = 63/236 (26%), Positives = 103/236 (43%), Gaps = 32/236 (13%)
Query: 22 PHQWQTDEEGVRTGKCSFPVKYLGHVEVDESRGMHICEDAVKRL----KATGKKAVKAVL 77
P W E + G F +KYLG V++ +G + A+KR+ KA+GKK K L
Sbjct: 32 PENWTDTRETLLEGML-FSLKYLGMTLVEQPKGEELSAAAIKRIVATAKASGKKLQKVTL 90
Query: 78 WVSADGLRVVDEKTKDLIVDQTIEKVSFCAPDRNFDRAFSYICRDGTTRRWICHCFMAVK 137
VS G+ + D T LI + +I ++S+C D+ D+ F+YI + + CH F+ K
Sbjct: 91 KVSPRGIILTDNLTNQLIENVSIYRISYCTADKMHDKVFAYIAQSQHNQSLECHAFLCTK 150
Query: 138 -DTGERLSHAVGCAFAACLE--RKQKREKECGVTATFDASRTTFTREGSFRVTTATEQAE 194
+ ++ V AF E + K EKE R ++EG
Sbjct: 151 RKMAQAVTLTVAQAFKVAFEFWQVSKEEKE---------KRDKASQEGG----------- 190
Query: 195 REEIMKQMQDAKKAETDKIVVGSSVAPGNTAPSPSSPTSPTSDATTSLEMNNPHAI 250
+++ QD + + G+ + TA +P S S ++ T E+ P A+
Sbjct: 191 --DVLGARQDCTPSLKSLVATGNLLDLEETAKAPLSTVS--ANTTNMDEVPRPQAL 242
>gi|50511947 cajalin 2 isoform b [Homo sapiens]
Length = 510
Score = 58.9 bits (141), Expect = 1e-08
Identities = 37/125 (29%), Positives = 59/125 (47%), Gaps = 8/125 (6%)
Query: 19 ASRPHQ-WQTDEEGVRTGKCSFPVKYLGHVEVDESRGMHICEDAVKRLKATGKKAVKA-- 75
AS P Q WQ E + C + YLG + + E RG +DA +++A +K+ +
Sbjct: 291 ASTPVQYWQHHPEKLIFQSCDYKAFYLGSMLIKELRGTESTQDACAKMRANCQKSTEQMK 350
Query: 76 -----VLWVSADGLRVVDEKTKDLIVDQTIEKVSFCAPDRNFDRAFSYICRDGTTRRWIC 130
+L VS G++ +D K++I + I +S A D F+YI +D + C
Sbjct: 351 KVPTIILSVSYKGVKFIDATNKNIIAEHEIRNISCAAQDPEDLSTFAYITKDLKSNHHYC 410
Query: 131 HCFMA 135
H F A
Sbjct: 411 HVFTA 415
>gi|50511945 cajalin 2 isoform a [Homo sapiens]
Length = 1248
Score = 58.9 bits (141), Expect = 1e-08
Identities = 37/125 (29%), Positives = 59/125 (47%), Gaps = 8/125 (6%)
Query: 19 ASRPHQ-WQTDEEGVRTGKCSFPVKYLGHVEVDESRGMHICEDAVKRLKATGKKAVKA-- 75
AS P Q WQ E + C + YLG + + E RG +DA +++A +K+ +
Sbjct: 1041 ASTPVQYWQHHPEKLIFQSCDYKAFYLGSMLIKELRGTESTQDACAKMRANCQKSTEQMK 1100
Query: 76 -----VLWVSADGLRVVDEKTKDLIVDQTIEKVSFCAPDRNFDRAFSYICRDGTTRRWIC 130
+L VS G++ +D K++I + I +S A D F+YI +D + C
Sbjct: 1101 KVPTIILSVSYKGVKFIDATNKNIIAEHEIRNISCAAQDPEDLSTFAYITKDLKSNHHYC 1160
Query: 131 HCFMA 135
H F A
Sbjct: 1161 HVFTA 1165
>gi|10047134 cajalin 2 isoform c [Homo sapiens]
Length = 414
Score = 58.9 bits (141), Expect = 1e-08
Identities = 37/125 (29%), Positives = 59/125 (47%), Gaps = 8/125 (6%)
Query: 19 ASRPHQ-WQTDEEGVRTGKCSFPVKYLGHVEVDESRGMHICEDAVKRLKATGKKAVKA-- 75
AS P Q WQ E + C + YLG + + E RG +DA +++A +K+ +
Sbjct: 207 ASTPVQYWQHHPEKLIFQSCDYKAFYLGSMLIKELRGTESTQDACAKMRANCQKSTEQMK 266
Query: 76 -----VLWVSADGLRVVDEKTKDLIVDQTIEKVSFCAPDRNFDRAFSYICRDGTTRRWIC 130
+L VS G++ +D K++I + I +S A D F+YI +D + C
Sbjct: 267 KVPTIILSVSYKGVKFIDATNKNIIAEHEIRNISCAAQDPEDLSTFAYITKDLKSNHHYC 326
Query: 131 HCFMA 135
H F A
Sbjct: 327 HVFTA 331
>gi|33350928 disabled homolog 1 [Homo sapiens]
Length = 555
Score = 57.4 bits (137), Expect = 4e-08
Identities = 44/145 (30%), Positives = 69/145 (47%), Gaps = 21/145 (14%)
Query: 30 EGVRTGKCSFPVKYLGHVEVDESRGMHICEDAVKRLKAT-------GKKAVKAVLWVSAD 82
EGVR + K +G EV +RG +C+D++ +LK G+ K L +S
Sbjct: 38 EGVR-----YKAKLIGIDEVSAARGDKLCQDSMMKLKGVVAGARSKGEHKQKIFLTISFG 92
Query: 83 GLRVVDEKTKDLIVDQTIEKVSFCAPDRNFDRAFSYIC-RDGTTRRWICHCFMAVK--DT 139
G+++ DEKT L + ++S+ A D RAF Y+C ++G H F+A+K
Sbjct: 93 GIKIFDEKTGALQHHHAVHEISYIAKDITDHRAFGYVCGKEGN------HRFVAIKTAQA 146
Query: 140 GERLSHAVGCAFAACLERKQKREKE 164
E + + F E KQ+ E E
Sbjct: 147 AEPVILDLRDLFQLIYELKQREELE 171
>gi|149773456 hypothetical protein LOC643314 [Homo sapiens]
Length = 1427
Score = 57.0 bits (136), Expect = 5e-08
Identities = 80/352 (22%), Positives = 126/352 (35%), Gaps = 38/352 (10%)
Query: 220 APGNTAPSPSSPTSPTSDATTSLEMNNPHA-IPRRHAPIEQLARQGSFRGFPALSQKMSP 278
+P P+P PTSP + T E +P A +P P A P + SP
Sbjct: 1041 SPAAAVPTPEEPTSPAAAVPTPEEPTSPAAAVPTPEEPTSPAA------AVPTPEEPTSP 1094
Query: 279 FKRQLSLRINELPSTMQRKTDFPIKNA--VPEVEGEAESISSLCSQITNAFSTPEDPFSS 336
+ P+ + P A VP E A +++ + AF P P
Sbjct: 1095 AAAVPTPEEPTSPAAAVPTPEEPASPAAAVPTPEEPASPAAAVPTPEEPAFPAPAVPTPE 1154
Query: 337 APMTKPVTVVAPQSPTFQANGTDSAFHVLAKPAHTA--LAPVAMPVRETNPWAHAPDAAN 394
+ V V P+ A + PA +A A VA T+P A P A
Sbjct: 1155 ESASAAVAVPTPEESASPAAAVPT-------PAESASFAAVVATLEEPTSPAASVPTPAA 1207
Query: 395 -----KEIAATCSGTEWGQSSGAASPGLFQAGHRRTPSEADRWLEEVSKSVRAQ-QPQAS 448
+E + + + + + + +P+ A LEE + S A P+
Sbjct: 1208 MVATLEEFTSPAASVPTSEEPASLAAAVSNPEEPTSPAAAVPTLEEPTSSAAAVLTPEEL 1267
Query: 449 AAPLQPVLQPPPPTAISQPASPFQGNAFLTSQPVPVGVVPALQPAFVPAQSYPVANGMPY 508
++P V P +PASP + L P VP + A +PA S P
Sbjct: 1268 SSPAASVPTP------EEPASPAAAVSNLEEPASPAAAVPTPEVAAIPAASVPTPE---- 1317
Query: 509 PAPNVPVVGITPSQMVANVFGTAGHPQAAHPHQSPSLVRQQTFPHYEASSAT 560
P +P + P + V+ + G +AH P + ++ P E +S+T
Sbjct: 1318 -VPAIPAAAVPPMEEVSPI-GVPFLGVSAHTDSVP--ISEEGTPVLEEASST 1365
Score = 49.7 bits (117), Expect = 8e-06
Identities = 76/310 (24%), Positives = 107/310 (34%), Gaps = 36/310 (11%)
Query: 329 TPEDPFSSAPMTKPVTVVAPQSPTFQANGTDSAFHVLAKPAHTALAPVAMPVRE--TNPW 386
T ED P+T TV AP+ P D+A ++ P A A+P E T+P
Sbjct: 965 TEEDGTPEGPVTPATTVHAPEEP-------DTAAVRVSTPEEPASPAAAVPTPEEPTSPA 1017
Query: 387 AHAPDAAN-KEIAATCSGTEWGQSSGAASPGLFQAGHRRTPSEADRWLEEVSKSVRA--- 442
A P AA E S AA P +P+ A EE + A
Sbjct: 1018 AAVPTPEEPTSPAAAVPPPEEPTSPAAAVP---TPEEPTSPAAAVPTPEEPTSPAAAVPT 1074
Query: 443 -QQPQASAAPLQPVLQPPPPTAI----SQPASPFQGNAFLTSQPVPVGVVPALQPAFVPA 497
++P + AA + +P P A +P SP P VP + PA
Sbjct: 1075 PEEPTSPAAAVPTPEEPTSPAAAVPTPEEPTSPAAAVPTPEEPASPAAAVPTPEEPASPA 1134
Query: 498 QSYPVANGMPYPAPNVPVVGITPSQMVANVFGTAGHPQAAHPHQSPSLVRQQTFPHYEAS 557
+ P +PAP VP + S VA P +S S P AS
Sbjct: 1135 AAVPTPEEPAFPAPAVPTPEESASAAVA----------VPTPEESASPAAAVPTPAESAS 1184
Query: 558 SATTSPFFKPPAQHLNGSAAFNGVDDGRLASADRHTEVPTGTCPVDPFEAQWAALENKSK 617
A + P AA +A+ + T P + P A AA + +
Sbjct: 1185 FAAVVATLEEP----TSPAASVPTPAAMVATLEEFTS-PAASVPTSEEPASLAAAVSNPE 1239
Query: 618 QRTNPSPTNP 627
+ T+P+ P
Sbjct: 1240 EPTSPAAAVP 1249
>gi|140161500 ankyrin repeat and sterile alpha motif domain containing
1 [Homo sapiens]
Length = 1134
Score = 56.2 bits (134), Expect = 9e-08
Identities = 31/115 (26%), Positives = 53/115 (46%), Gaps = 3/115 (2%)
Query: 25 WQTDEEGVRTGKCSFPVKYLGHVEVDESRGMHICEDAVKRLKATG---KKAVKAVLWVSA 81
WQ E + C + YLG + + + RG +DA +++ + KK +L ++
Sbjct: 928 WQHQPEKLIFESCGYEANYLGSMLIKDLRGTESTQDACAKMRKSTEHMKKIPTIILSITY 987
Query: 82 DGLRVVDEKTKDLIVDQTIEKVSFCAPDRNFDRAFSYICRDGTTRRWICHCFMAV 136
G++ +D K++I + I +S A D F+YI +D T CH F V
Sbjct: 988 KGVKFIDASNKNVIAEHEIRNISCAAQDPEDLCTFAYITKDLQTSHHYCHVFSTV 1042
>gi|31317301 nitric oxide synthase 1 (neuronal) adaptor protein
isoform 1 [Homo sapiens]
Length = 506
Score = 51.2 bits (121), Expect = 3e-06
Identities = 63/262 (24%), Positives = 109/262 (41%), Gaps = 43/262 (16%)
Query: 28 DEEGVRTGKCSFPVKYLGHVEVDESRGMHICEDAVKRL----KATGKKAVKAVLWVSADG 83
+E+ + G C F KY+G ++V A++R+ KA K K + VS DG
Sbjct: 22 NEDAFQHGIC-FEAKYVGSLDVPRPNSRVEIVAAMRRIRYEFKAKNIKKKKVSIMVSVDG 80
Query: 84 LRVVDEKTKDLIVDQTIE----------------KVSFCAPDRNFDRAFSYICRDGTTRR 127
++V+ +K K L++ Q E ++ + + D + FSYI RDG +
Sbjct: 81 VKVILKKKKKLLLLQKKEWTWDESKMLVMQDPIYRIFYVSHDSQDLKIFSYIARDGASNI 140
Query: 128 WICHCFMAVKDT-GERLSHAVGCAFAAC----LERKQKR-------EKECGVTATFDASR 175
+ C+ F + K + R+ VG AF C L+ Q+ E E ++ D R
Sbjct: 141 FRCNVFKSKKKSQAMRIVRTVGQAFEVCHKLSLQHTQQNADGQEDGESERNSNSSGDPGR 200
Query: 176 TTFTREGSFRVTTAT-EQAEREEIM-----KQMQDAKKAETDKIVVGSSVAPGNTAPSPS 229
G+ R +TAT E+ + + + + + + TD VG +T S
Sbjct: 201 QL---TGAERASTATAEETDIDAVEVPLPGNDVLEFSRGVTDLDAVGKE-GGSHTGSKVS 256
Query: 230 SPTSPTSDATTSLEMNNPHAIP 251
P P A+ + + + + P
Sbjct: 257 HPQEPMLTASPRMLLPSSSSKP 278
>gi|239743232 PREDICTED: hypothetical protein XP_002342775 [Homo
sapiens]
Length = 834
Score = 50.8 bits (120), Expect = 4e-06
Identities = 86/372 (23%), Positives = 129/372 (34%), Gaps = 56/372 (15%)
Query: 213 IVVGSSVAPGNTAPSPSSPTSPTSDATTSLEMNNPHAIPRRHAPIEQLARQGSFRGFPAL 272
++ S+ P +P PT T + P P++ S PA
Sbjct: 248 LIPAPSMVPATDTKAP--PTLQAETTTKPQATSAPSPAPKQSFLFGTQNTSPSSPAAPAA 305
Query: 273 SQKMSPFKRQLSLRINELPSTMQRKTDFPIKNAVPEVEGEAESISSLCSQITNAFSTPED 332
S FK I P +++ P P V A S SSL + + T +
Sbjct: 306 SSASPMFKP-----IFTAPPKSEKEGPTP---PGPSVSATAPSSSSLPTTTSTTAPTFQP 357
Query: 333 PFSSAPMTKPVTVVAPQSPTFQANGTDSAFHVLAKPAHTALAPVAMPVRETNPWAHAPDA 392
FSS M P +V P +P F+ T + P T LA V + + D+
Sbjct: 358 VFSS--MGPPASVPLP-APFFKQTTTPATAPTTTAPLFTGLASATSAVAPITSASPSTDS 414
Query: 393 ANK--------EIAATCSGTEWGQSSGAASPGLFQAGHRRTPSEADRWLEEVSKSVRAQQ 444
A+K ++++ T ++ A+ P LF A + A + + + +
Sbjct: 415 ASKPAFGFGINSVSSSSVSTTTSTATAASQPFLFGAPQ----ASAASFTPAMGSIFQFGK 470
Query: 445 PQA-----SAAPLQPVLQPPPPTAISQPASPFQG--NAFLTSQPV--------------P 483
P A + L PTA S A+ F G + TS P P
Sbjct: 471 PPALPTTTTVTTFSQSLPTAVPTATSSSAADFSGFGSTLATSAPATSSQPTLTFSNTSTP 530
Query: 484 VGVVPALQPAFVPAQSYPVANGMPYPA--------PNVPVVGITPSQMVANVFGTAGHPQ 535
+P A P SYP AN P PA P +TPS + FG + P
Sbjct: 531 TFNIPFGSSAKSPLPSYPGAN--PQPAFGAAEGQPPGAAKPALTPSFGSSFTFGNSAAPA 588
Query: 536 AAHPHQSPSLVR 547
AA PS+++
Sbjct: 589 AAPTPAPPSMIK 600
>gi|148491082 disabled homolog 2 [Homo sapiens]
Length = 770
Score = 50.4 bits (119), Expect = 5e-06
Identities = 36/112 (32%), Positives = 62/112 (55%), Gaps = 15/112 (13%)
Query: 39 FPVKYLGHVEVDESRGMHICEDAVKRLK---ATGKKAV--KAVLWV--SADGLRVVDEKT 91
+ K +G +V ++RG + +D++ +LK A G+ K +WV S G++++DEKT
Sbjct: 50 YKAKLIGIDDVPDARGDKMSQDSMMKLKGMAAAGRSQGQHKQRIWVNISLSGIKIIDEKT 109
Query: 92 KDLIVDQTIEKVSFCAPDRNFDRAFSYIC-RDGTTRRWICHCFMAVKDTGER 142
+ + + K+SF A D +RAF Y+C +G H F A+K TG++
Sbjct: 110 GVIEHEHPVNKISFIARDVTDNRAFGYVCGGEGQ------HQFFAIK-TGQQ 154
>gi|26051278 nuclear pore membrane protein 121 [Homo sapiens]
Length = 984
Score = 50.1 bits (118), Expect = 6e-06
Identities = 82/368 (22%), Positives = 126/368 (34%), Gaps = 48/368 (13%)
Query: 213 IVVGSSVAPGNTAPSPSSPTSPTSDATTSLEMNNPHAIPRRHAPIEQLARQGSFRGFPAL 272
++ S+ P +P PT AT + P P++ S PA
Sbjct: 399 LIPAPSMVPATDTKAP--PTLQAETATKPQATSAPSPAPKQSFLFGTQNTSPSSPAAPAA 456
Query: 273 SQKMSPFKRQLSLRINELPSTMQRKTDFPIKNAVPEVEGEAESISSLCSQITNAFSTPED 332
S FK I P +++ P P V A S SSL + + T +
Sbjct: 457 SSAPPMFKP-----IFTAPPKSEKEGPTP---PGPSVTATAPSSSSLPTTTSTTAPTFQP 508
Query: 333 PFSSAPMTKPVTVVAPQSPTFQANGTDSAFHVLAKPAHTALAPVAMPVRETNPWAHAPDA 392
FSS M P +V P +P F+ T + P T LA V + + D+
Sbjct: 509 VFSS--MGPPASVPLP-APFFKQTTTPATAPTTTAPLFTGLASATSAVAPITSASPSTDS 565
Query: 393 ANK--------EIAATCSGTEWGQSSGAASPGLFQAGHRRTPS----------------- 427
A+K ++++ T ++ A+ P LF A S
Sbjct: 566 ASKPAFGFGINSVSSSSVSTTTSTATAASQPFLFGAPQASAASFTPAMGSIFQFGKPPAL 625
Query: 428 EADRWLEEVSKSVRAQQPQASAAPLQPVLQPPPPTAISQPASPFQGNAFLTSQPVPVGVV 487
+ S+S+ P A+++ A S PA+ Q ++ P +
Sbjct: 626 PTTTTVTTFSQSLHTAVPTATSSSAADFSGFGSTLATSAPATSSQPTLTFSNTSTPTFNI 685
Query: 488 PALQPAFVPAQSYPVANGMPYPA--------PNVPVVGITPSQMVANVFGTAGHPQAAHP 539
P A P SYP AN P PA P + PS + FG + P AA
Sbjct: 686 PFGSSAKSPLPSYPGAN--PQPAFGAAEGQPPGAAKPALAPSFGSSFTFGNSAAPAAAPT 743
Query: 540 HQSPSLVR 547
PS+++
Sbjct: 744 PAPPSMIK 751
Score = 34.7 bits (78), Expect = 0.28
Identities = 75/365 (20%), Positives = 123/365 (33%), Gaps = 54/365 (14%)
Query: 221 PGNTAPSPSSPTSPTSDATTSLEMNNPHAIPRRHAPIEQLARQGSFRGFPALSQKMSPFK 280
P TA +PSS + PT+ +TT AP Q S G PA +PF
Sbjct: 483 PSVTATAPSSSSLPTTTSTT--------------APTFQPVF--SSMGPPASVPLPAPFF 526
Query: 281 RQLSLRINELPSTMQRKTDF--------PIKNAVPEVEGEAESISSLCSQITNAFSTPED 332
+Q + +T T PI +A P + ++ ++ S
Sbjct: 527 KQTTTPATAPTTTAPLFTGLASATSAVAPITSASPSTDSASKPAFGFGINSVSSSSVSTT 586
Query: 333 PFSSAPMTKPVTVVAPQSPTFQANGTDSAFHVLAKPAHTALAPVAMPVRETNPWAH-APD 391
++ ++P APQ+ + KP P V + H A
Sbjct: 587 TSTATAASQPFLFGAPQASAASFTPAMGSIFQFGKPP---ALPTTTTVTTFSQSLHTAVP 643
Query: 392 AANKEIAATCSGTEWGQSSGAASPGLFQA-----GHRRTPSEADRWLEEVSKSVRAQQPQ 446
A AA SG +G + ++P + TP+ + +KS P
Sbjct: 644 TATSSSAADFSG--FGSTLATSAPATSSQPTLTFSNTSTPT-FNIPFGSSAKSPLPSYPG 700
Query: 447 ASAAPLQPVLQPPPPTAISQPASPFQGNAFLTSQ---------PVPVGVVPALQPAFVPA 497
A+ P + PP A +P G++F P P ++ + PA+VP
Sbjct: 701 ANPQPAFGAAEGQPPGAAKPALAPSFGSSFTFGNSAAPAAAPTPAPPSMIKVV-PAYVPT 759
Query: 498 QSYPVANGMPYPAPNVPVVGITPSQMVANVFGTAGHPQAAHPHQSPSLVRQQTFPHYEAS 557
+P+ G + A + + A+ FG Q A + T + A+
Sbjct: 760 PIHPIFGGATHSAFGL--------KATASAFGAPASSQPAFGGSTAVFFGAATSSGFGAT 811
Query: 558 SATTS 562
+ T S
Sbjct: 812 TQTAS 816
>gi|19111150 angiomotin isoform 2 [Homo sapiens]
Length = 675
Score = 48.9 bits (115), Expect = 1e-05
Identities = 93/396 (23%), Positives = 144/396 (36%), Gaps = 59/396 (14%)
Query: 143 LSHAVGCAFAACLERKQKREKECGVTATFDASRTTFTREGSFRVTTATEQAEREEIMKQM 202
+SH+ ++ LE + ++E+E A++ EG + T + E++ ++K +
Sbjct: 302 ISHSPNTSYDTALEARIQKEEE----EILMANKRCLDMEGRIK-TLHAQIIEKDAMIKVL 356
Query: 203 QDAKKAETDKIVVGSSVAPGNTAPSPSSPTSPTSDATTSLEMNNPHAIPRRHAPIEQLAR 262
Q + E K S + P + S S+ S L+
Sbjct: 357 QQRSRKEPSKTEQLSCMRPAKSLMSISNAGSGL------------------------LSH 392
Query: 263 QGSFRGFPALSQKMSPFKRQLSLRI---NELPSTMQRKTDFPIKNAVPEVEGEAESISSL 319
+ G P + +K + SL I + + T P+ + P + +++ S
Sbjct: 393 SSTLTGSPIMEEKRDDKSWKGSLGILLGGDYRAEYVPSTPSPVPPSTPLLSAHSKTGSRD 452
Query: 320 CSQITNAFSTPEDPFSSAPMTKPVTVVAPQSPTFQANGTDSAFHVLAKPAHT---ALAPV 376
CS T + + AP++ P V A T +A A T A APV
Sbjct: 453 CSTQTERGTESNKTAAVAPISVPAPVAAA--------ATAAAITATAATITTTMVAAAPV 504
Query: 377 AMPVRETNPWAHAPDAANKEI-AATCSGTEWGQSSGAASPGLFQAGHRRTPSEADRWLEE 435
A+ A AP A AA S GQ AAS A PS A +
Sbjct: 505 AVAAAAAPAAAAAPSPATAAATAAAVSPAAAGQIPAAASVASAAAV---APSAAAAAAVQ 561
Query: 436 VSKSVRAQQPQASAAPLQPVLQPPPPTAISQPASPFQGNAFLTSQPVPVGVVPALQPAFV 495
V+ P A A P L P P A +Q ++P Q A TS P V PA P
Sbjct: 562 VA-------PAAPAPVPAPALVPVPAPAAAQASAPAQTQA-PTSAPA-VAPTPAPTPTPA 612
Query: 496 PAQSYPVANGMPYPAP---NVPVVGITPSQMVANVF 528
AQ+ A+ P P ++P + P + VF
Sbjct: 613 VAQAEVPASPATGPGPHRLSIPSLTCNPDKTDGPVF 648
>gi|166064029 angiomotin isoform 1 [Homo sapiens]
Length = 1084
Score = 48.9 bits (115), Expect = 1e-05
Identities = 93/396 (23%), Positives = 144/396 (36%), Gaps = 59/396 (14%)
Query: 143 LSHAVGCAFAACLERKQKREKECGVTATFDASRTTFTREGSFRVTTATEQAEREEIMKQM 202
+SH+ ++ LE + ++E+E A++ EG + T + E++ ++K +
Sbjct: 711 ISHSPNTSYDTALEARIQKEEE----EILMANKRCLDMEGRIK-TLHAQIIEKDAMIKVL 765
Query: 203 QDAKKAETDKIVVGSSVAPGNTAPSPSSPTSPTSDATTSLEMNNPHAIPRRHAPIEQLAR 262
Q + E K S + P + S S+ S L+
Sbjct: 766 QQRSRKEPSKTEQLSCMRPAKSLMSISNAGSGL------------------------LSH 801
Query: 263 QGSFRGFPALSQKMSPFKRQLSLRI---NELPSTMQRKTDFPIKNAVPEVEGEAESISSL 319
+ G P + +K + SL I + + T P+ + P + +++ S
Sbjct: 802 SSTLTGSPIMEEKRDDKSWKGSLGILLGGDYRAEYVPSTPSPVPPSTPLLSAHSKTGSRD 861
Query: 320 CSQITNAFSTPEDPFSSAPMTKPVTVVAPQSPTFQANGTDSAFHVLAKPAHT---ALAPV 376
CS T + + AP++ P V A T +A A T A APV
Sbjct: 862 CSTQTERGTESNKTAAVAPISVPAPVAAA--------ATAAAITATAATITTTMVAAAPV 913
Query: 377 AMPVRETNPWAHAPDAANKEI-AATCSGTEWGQSSGAASPGLFQAGHRRTPSEADRWLEE 435
A+ A AP A AA S GQ AAS A PS A +
Sbjct: 914 AVAAAAAPAAAAAPSPATAAATAAAVSPAAAGQIPAAASVASAAAV---APSAAAAAAVQ 970
Query: 436 VSKSVRAQQPQASAAPLQPVLQPPPPTAISQPASPFQGNAFLTSQPVPVGVVPALQPAFV 495
V+ P A A P L P P A +Q ++P Q A TS P V PA P
Sbjct: 971 VA-------PAAPAPVPAPALVPVPAPAAAQASAPAQTQA-PTSAPA-VAPTPAPTPTPA 1021
Query: 496 PAQSYPVANGMPYPAP---NVPVVGITPSQMVANVF 528
AQ+ A+ P P ++P + P + VF
Sbjct: 1022 VAQAEVPASPATGPGPHRLSIPSLTCNPDKTDGPVF 1057
>gi|146219843 Snf2-related CBP activator protein [Homo sapiens]
Length = 3230
Score = 48.1 bits (113), Expect = 2e-05
Identities = 89/382 (23%), Positives = 129/382 (33%), Gaps = 63/382 (16%)
Query: 227 SPSSPTSPTSDATTSLEMNNPHAIPRRHAPIEQLARQGSFRGFPALSQKMSPFKRQLSLR 286
SPS S ++ L +++P H P S P S SP +S+
Sbjct: 1380 SPSPEVSASAPGAAPLTISSP-----LHVPSSLPGPASSPMPIPNSSPLASPVSSTVSVP 1434
Query: 287 INE-----LPSTMQRKTDFPIKNAVPEVEGEAESISSLCSQITNAFSTPEDPFSSAPMTK 341
++ +P+T+ P+ +P + + +T + S P S P
Sbjct: 1435 LSSSLPISVPTTLPAPASAPL--TIP-----------ISAPLTVSASGPALLTSVTPPLA 1481
Query: 342 PVTVVAPQSPTFQANGTDSAFHVLA-----KPAHTALAPVAMPVRETNPWAHAPDAANKE 396
PV AP P+ +G + L P+ ++ P+ +H P N
Sbjct: 1482 PVVPAAPGPPSLAPSGASPSASALTLGLATAPSLSSSQTPGHPLLLAPTSSHVP-GLNST 1540
Query: 397 IAATCSGTEWGQSSGAASPGLFQAGHRRTPSEADRWLEEVSKSVRAQQPQASAAPLQPVL 456
+A CS +S ASP F + P++A S S QA A PL P+
Sbjct: 1541 VAPACSPV-LVPASALASP--FPSAPNPAPAQASLLAPASSAS------QALATPLAPMA 1591
Query: 457 QPPPPTAISQPASPFQGNAFLTSQPVPVGV-------VPALQPAFVPAQSYPVANGMPYP 509
P PA P L P V VP + P+ P S A+ +P P
Sbjct: 1592 APQTAILAPSPAPPLAPLPVLAPSPGAAPVLASSQTPVPVMAPSSTPGTSLASASPVPAP 1651
Query: 510 AP-----------NVPVVGITPS----QMVANVFGTAGHPQAAHPHQSPSLVR---QQTF 551
P PV PS Q +A A + P Q+ SL Q F
Sbjct: 1652 TPVLAPSSTQTMLPAPVPSPLPSPASTQTLALAPALAPTLGGSSPSQTLSLGTGNPQGPF 1711
Query: 552 PHYEASSATTSPFFKPPAQHLN 573
P S S PAQ L+
Sbjct: 1712 PTQTLSLTPASSLVPTPAQTLS 1733
Score = 33.1 bits (74), Expect = 0.81
Identities = 46/187 (24%), Positives = 73/187 (39%), Gaps = 19/187 (10%)
Query: 363 HVLAKPAHTALAPVAMPVRETNPWAHAPDAANKEIAATCSGTEWGQSSGAASP------G 416
H++++PAH AL P P + P + A +G ++ P G
Sbjct: 1249 HLISQPAHVALIQAVAPTPGPTPVSVLPSSTPSTTPAP-TGLSLPLAANQVPPTMVNNTG 1307
Query: 417 LFQAGHRRTPSEADRWLEEVSKSVRAQQPQASAAPLQPVLQPPPPTAISQPASPFQGNAF 476
+ + R+ P + L V A +P +S P VL P P + +P G A
Sbjct: 1308 VVKIVVRQAPRDG---LTPVPPLAPAPRPPSSGLP--AVLNPRPTLTPGRLPTPTLGTA- 1361
Query: 477 LTSQPVPVGVVPALQPAFVPAQSYPVANGMPYPAPNVPVVGITPSQMVANVFGTAGHPQA 536
P P V P L+ V + S V+ P A P+ +P + +++ G A P
Sbjct: 1362 RAPMPTPTLVRPLLK--LVHSPSPEVSASAPGAA---PLTISSPLHVPSSLPGPASSPMP 1416
Query: 537 AHPHQSP 543
P+ SP
Sbjct: 1417 I-PNSSP 1422
>gi|150378545 POM121 membrane glycoprotein (rat)-like [Homo sapiens]
Length = 987
Score = 47.0 bits (110), Expect = 5e-05
Identities = 90/382 (23%), Positives = 131/382 (34%), Gaps = 67/382 (17%)
Query: 213 IVVGSSVAPGNTAPSPSSPTSPTSDATTSLEMNNPHAIPRRHAPIEQLARQGSFRGFPAL 272
++ S+ P +P PT AT + P P++ S PA
Sbjct: 399 LIPAPSMVPATDTKAP--PTLQAETATKPQATSAPSPAPKQSFLFGTQNTSPSSPAAPAA 456
Query: 273 SQKMSPFKRQLSLRINELPSTMQRKTDFPIKNAVPEVEGEAESISSLCSQITNAFSTPED 332
S FK I P +++ P P V A S SSL + + T +
Sbjct: 457 SSASPMFKP-----IFTAPPKSEKEGPTP---PGPSVTATAPSSSSLPTTTSTTAPTFQP 508
Query: 333 PFSSAPMTKPVTVVAPQSPTFQANGTDSAFHVLAKPAHTALAPVAMPVRETNPWAHAPDA 392
FSS M P +V P +P F+ T + P T LA V + + D+
Sbjct: 509 VFSS--MGPPASVPLP-APFFKQTTTPATAPTTTAPLFTGLASATSAVAPITSASPSTDS 565
Query: 393 ANK--------EIAATCSGTEWGQSSGAASPGLFQAGHRRTPSEADRWLEEVSKSVRAQQ 444
A+K ++++ T ++ A+ P LF A + A + + + +
Sbjct: 566 ASKPAFGFGINSVSSSSVSTTTSTATAASQPFLFGAPQ----ASAASFTPAMGSIFQFGK 621
Query: 445 PQA-----SAAPLQPVLQPPPPTAISQPASPFQG--NAFLTSQPV--------------P 483
P A + L PTA S A+ F G + TS P P
Sbjct: 622 PPALPTTTTVTTFSQSLPTAVPTATSSSAADFSGFGSTLATSAPATSSQPTLTFSNTSTP 681
Query: 484 VGVVPALQPAFVPAQSYPVANGMPYPAPNVPVVGITPSQMVANVFGTA--GHPQAAHPHQ 541
+P A P SYP AN P PA FG A P AA P
Sbjct: 682 TFNIPFGSSAKSPLPSYPGAN--PQPA-----------------FGAAEGQPPGAAKPAL 722
Query: 542 SPSLVRQQTFPHYEASSATTSP 563
+PS TF + A + T+P
Sbjct: 723 TPSFGSSFTFGNSAAPAPATAP 744
>gi|21327715 transcription elongation regulator 1 isoform 1 [Homo
sapiens]
Length = 1098
Score = 46.2 bits (108), Expect = 9e-05
Identities = 36/107 (33%), Positives = 46/107 (42%), Gaps = 13/107 (12%)
Query: 424 RTPSEADRWLEEVSKSVRAQQPQASAAPLQPVLQPPPPTAISQPASPFQGNAFLTSQPVP 483
+TPS A + + +V P +A P+Q V QP P T PA P S P P
Sbjct: 304 QTPSSA---VSVATPTVSVSTPAPTATPVQTVPQPHPQTL--PPAVPH-------SVPQP 351
Query: 484 VGVVPALQPAFVPAQSYPVANGMPYPAPNVPVVGITPSQMVANVFGT 530
+PA P VP P+ GMP P P V ++ I V V T
Sbjct: 352 TTAIPAFPPVMVPPFRVPLP-GMPIPLPGVAMMQIVSCPYVKTVATT 397
Score = 32.3 bits (72), Expect = 1.4
Identities = 26/91 (28%), Positives = 37/91 (40%), Gaps = 17/91 (18%)
Query: 442 AQQPQASAAPLQPVLQPPPPTAISQ-----PASPFQGNAF---LTSQPVPVGVVPALQPA 493
A P A P+++PPPP + + P PF F + P P G+ P + P
Sbjct: 33 APPPNAVMRGPPPLMRPPPPFGMMRGPPPPPRPPFGRPPFDPNMPPMPPPGGIPPPMGPP 92
Query: 494 FV--------PAQSYPVANGMPYPAPNVPVV 516
+ P S P GM +P P +P V
Sbjct: 93 HLQRPPFMPPPMSSMPPPPGMMFP-PGMPPV 122
>gi|91208420 bassoon protein [Homo sapiens]
Length = 3926
Score = 45.4 bits (106), Expect = 2e-04
Identities = 45/180 (25%), Positives = 66/180 (36%), Gaps = 11/180 (6%)
Query: 445 PQASAAPLQPVLQPPPPTAISQPASPFQGNAFLTSQPVPVGVVPALQPAFVPAQSYPVAN 504
P A QP QPP P + P Q P G PAF P SYP
Sbjct: 3045 PSGPTAFQQPRFQPPAPQYSAGSGGPTQNGFPAHQAPTYPGPSTYPAPAFPPGASYPAEP 3104
Query: 505 GMPYP---APNVPVVGITPSQMV-ANVFGTAGHPQA--AHPHQSPSLVRQQTFP-HYEAS 557
G+P P G TP + +F +A P Q+ +Q P +YE
Sbjct: 3105 GLPNQQAFRPTGHYAGQTPMPTTQSTLFPVPADSRAPLQKPRQTSLADLEQKVPTNYEVI 3164
Query: 558 SATTSPFFKPPAQ-HLNGSAAFNGVDDGRLASADR---HTEVPTGTCPVDPFEAQWAALE 613
++ P P++ +G A +G + G++ R V P P ++ + +LE
Sbjct: 3165 ASPVVPMSSAPSETSYSGPAVSSGYEQGKVPEVPRAGDRGSVSQSPAPTYPSDSHYTSLE 3224
Score = 38.5 bits (88), Expect = 0.019
Identities = 63/221 (28%), Positives = 76/221 (34%), Gaps = 46/221 (20%)
Query: 333 PFSSAPMTKPVTVVAPQSPTFQANGTDSAFHVLAKPAHTALAPVAMPVRETNPWAHAPDA 392
PFS P T T VAP G + A PA + +P P + + H+P
Sbjct: 1373 PFSQGPGTPATTAVAPCPA-----GLPRGYMTPASPAGSERSP--SPSSTAHSYGHSPTT 1425
Query: 393 ANKEIAATCSGTEWGQSSGAASPGLFQAGH--RRTPSEADRWLEEVSKSVRAQQPQASAA 450
AN S TE A GL AG R P A + RA AS++
Sbjct: 1426 ANYG-----SQTE---DLPQAPSGLAAAGRAAREKPLSASDGEGGTPQPSRAYSYFASSS 1477
Query: 451 P-LQPVLQPPPPTAISQPASPFQGNAFLTSQPVPVGVVPALQPAFVPAQSYPVANGMPYP 509
P L P PT P F T P P PA P + G P
Sbjct: 1478 PPLSPSSPSESPTFSPGKMGPRATAEFSTQTPSPA-----------PASDMPRSPGAP-- 1524
Query: 510 APNVPVVGITPSQMVANVFGTAGHPQAAHPHQSPSLVRQQT 550
TPS MVA GT Q H +P LV Q++
Sbjct: 1525 ---------TPSPMVAQ--GT----QTPHRPSTPRLVWQES 1550
>gi|189181724 proteoglycan 4 isoform D [Homo sapiens]
Length = 1270
Score = 43.9 bits (102), Expect = 5e-04
Identities = 94/464 (20%), Positives = 150/464 (32%), Gaps = 78/464 (16%)
Query: 168 TATFDASRTTFTREG-SFRVTTATEQAEREEIMKQMQDAKKAETDKIVVGSSVAPGNTAP 226
T+T +TT +E S T+A + A +++ + KAET ++ P T P
Sbjct: 162 TSTDGKEKTTSAKETQSIEKTSAKDLAPTSKVLAK--PTPKAET------TTKGPALTTP 213
Query: 227 SPSSPTSPTSDATTSLEMNNPHAIPRRHAPIEQLARQGSFRGFPALSQKMSPFKRQLSLR 286
+PT+P A+T+ + P I + P ++ +P + +
Sbjct: 214 KEPTPTTPKEPASTTPKEPTPTTI----------------KSAPTTPKEPAPTTTKSAPT 257
Query: 287 INELPSTMQRKTDFPIKNAVPEVEGEAESISSLCSQITNAFSTPEDPFSSAPMTKPVTVV 346
+ P+ K P P+ + + +A +TP++P + P T
Sbjct: 258 TPKEPAPTTTKEPAP---TTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTP 314
Query: 347 APQSPTFQANGTDSAFHVLAKPAHTALAPVAMPVRETNPWAHAPDAAN--KEIAATCSGT 404
+PT T + +PA T P +E P A A KE A T
Sbjct: 315 KEPAPTTPKEPTPTT---PKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKE 371
Query: 405 EWGQSSGAASPGLFQAGHRRTPSEADRWLEEVSKSVRAQQPQASAAPLQPVLQPPPPTAI 464
++ SP TP E P + + +P P T
Sbjct: 372 PAPTTTKEPSP--------TTPKEP--------------APTTTKSAPTTTKEPAPTTTK 409
Query: 465 SQPASPFQGNAFLTSQPVPVGVVPALQPAFVPAQSYPVANGMPYPAPNVPVVGITPSQMV 524
S P +P + + T +P P P + P P P TP +
Sbjct: 410 SAPTTPKEPSPTTTKEPAPT----------TPKEPAPTTPKKPAPTTPKEPAPTTPKEPA 459
Query: 525 ANVFGTAGHPQAAHPHQSPSLVRQQTFPHYEASSATTSPFFKPPAQHLNGSAAFNGVDDG 584
T P P + ++T P T+P + L +
Sbjct: 460 PT---TTKKPAPTTPKEPAPTTPKETAPTTPKKLTPTTP------EKLAPTTPEKPAPTT 510
Query: 585 RLASADRHTEVPTGTCPVDPF-EAQWAALENKSKQRTNPSPTNP 627
A E PT T P +P AA N K+ P+PT P
Sbjct: 511 PEELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKE---PAPTTP 551
Score = 36.6 bits (83), Expect = 0.073
Identities = 78/365 (21%), Positives = 123/365 (33%), Gaps = 47/365 (12%)
Query: 221 PGNTAPSPSSPTSPTSDATTSLEMNNPHAIPRRHAPIEQLARQGSFRGFPALSQKMSP-F 279
P T P +PT+P A T+L+ P P++ AP ++LA + S K +P
Sbjct: 631 PAPTTPKEPAPTTPKGTAPTTLKEPAP-TTPKKPAP-KELAPTTTKGPTSTTSDKPAPTT 688
Query: 280 KRQLSLRINELPSTMQRKTDFPIKNAVPEVEGEAESISSLCSQITNAFSTPED--PFSSA 337
++ + + P+ K P P S + + T +P++ P SA
Sbjct: 689 PKETAPTTPKEPAPTTPKKPAPTTPETPPPTTSEVSTPTTTKEPTTIHKSPDESTPELSA 748
Query: 338 PMTKPVTVVAPQSPTFQANGTDSAFHVLAKPAHTALAPVAMPVRETNPWAHAPDAANKEI 397
T +P+ P T +A KP T A R+ AA K
Sbjct: 749 EPTPKALENSPKEPGVPTTKTPAA----TKPEMTTTAKDKTTERDLRTTPETTTAAPKMT 804
Query: 398 AATCSGTEWGQSS---------------------------GAASPGLFQAGHRRTPSEAD 430
T + TE S +P + T +E
Sbjct: 805 KETATTTEKTTESKITATTTQVTSTTTQDTTPFKITTLKTTTLAPKVTTTKKTITTTEIM 864
Query: 431 RWLEEVSK-SVRAQQPQASA-APLQPVLQPPPPTAISQPASPFQGNAFLTSQPVP---VG 485
EE +K RA +A+ P +P P PT+ +P + + T+ P P
Sbjct: 865 NKPEETAKPKDRATNSKATTPKPQKPTKAPKKPTSTKKPKTMPRVRKPKTT-PTPRKMTS 923
Query: 486 VVPALQPAFVPAQSYPVANGMPYPAPNVPVVGITP-SQMVANVFGTAGH----PQAAHPH 540
+P L P A++ P PN +V + P S+ G H P P
Sbjct: 924 TMPELNPTSRIAEAMLQTTTRPNQTPNSKLVEVNPKSEDAGGAEGETPHMLLRPHVFMPE 983
Query: 541 QSPSL 545
+P +
Sbjct: 984 VTPDM 988
>gi|189181722 proteoglycan 4 isoform C [Homo sapiens]
Length = 1311
Score = 43.9 bits (102), Expect = 5e-04
Identities = 94/464 (20%), Positives = 150/464 (32%), Gaps = 78/464 (16%)
Query: 168 TATFDASRTTFTREG-SFRVTTATEQAEREEIMKQMQDAKKAETDKIVVGSSVAPGNTAP 226
T+T +TT +E S T+A + A +++ + KAET ++ P T P
Sbjct: 203 TSTDGKEKTTSAKETQSIEKTSAKDLAPTSKVLAK--PTPKAET------TTKGPALTTP 254
Query: 227 SPSSPTSPTSDATTSLEMNNPHAIPRRHAPIEQLARQGSFRGFPALSQKMSPFKRQLSLR 286
+PT+P A+T+ + P I + P ++ +P + +
Sbjct: 255 KEPTPTTPKEPASTTPKEPTPTTI----------------KSAPTTPKEPAPTTTKSAPT 298
Query: 287 INELPSTMQRKTDFPIKNAVPEVEGEAESISSLCSQITNAFSTPEDPFSSAPMTKPVTVV 346
+ P+ K P P+ + + +A +TP++P + P T
Sbjct: 299 TPKEPAPTTTKEPAP---TTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTP 355
Query: 347 APQSPTFQANGTDSAFHVLAKPAHTALAPVAMPVRETNPWAHAPDAAN--KEIAATCSGT 404
+PT T + +PA T P +E P A A KE A T
Sbjct: 356 KEPAPTTPKEPTPTT---PKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKE 412
Query: 405 EWGQSSGAASPGLFQAGHRRTPSEADRWLEEVSKSVRAQQPQASAAPLQPVLQPPPPTAI 464
++ SP TP E P + + +P P T
Sbjct: 413 PAPTTTKEPSP--------TTPKEP--------------APTTTKSAPTTTKEPAPTTTK 450
Query: 465 SQPASPFQGNAFLTSQPVPVGVVPALQPAFVPAQSYPVANGMPYPAPNVPVVGITPSQMV 524
S P +P + + T +P P P + P P P TP +
Sbjct: 451 SAPTTPKEPSPTTTKEPAPT----------TPKEPAPTTPKKPAPTTPKEPAPTTPKEPA 500
Query: 525 ANVFGTAGHPQAAHPHQSPSLVRQQTFPHYEASSATTSPFFKPPAQHLNGSAAFNGVDDG 584
T P P + ++T P T+P + L +
Sbjct: 501 PT---TTKKPAPTTPKEPAPTTPKETAPTTPKKLTPTTP------EKLAPTTPEKPAPTT 551
Query: 585 RLASADRHTEVPTGTCPVDPF-EAQWAALENKSKQRTNPSPTNP 627
A E PT T P +P AA N K+ P+PT P
Sbjct: 552 PEELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKE---PAPTTP 592
Score = 36.6 bits (83), Expect = 0.073
Identities = 78/365 (21%), Positives = 123/365 (33%), Gaps = 47/365 (12%)
Query: 221 PGNTAPSPSSPTSPTSDATTSLEMNNPHAIPRRHAPIEQLARQGSFRGFPALSQKMSP-F 279
P T P +PT+P A T+L+ P P++ AP ++LA + S K +P
Sbjct: 672 PAPTTPKEPAPTTPKGTAPTTLKEPAP-TTPKKPAP-KELAPTTTKGPTSTTSDKPAPTT 729
Query: 280 KRQLSLRINELPSTMQRKTDFPIKNAVPEVEGEAESISSLCSQITNAFSTPED--PFSSA 337
++ + + P+ K P P S + + T +P++ P SA
Sbjct: 730 PKETAPTTPKEPAPTTPKKPAPTTPETPPPTTSEVSTPTTTKEPTTIHKSPDESTPELSA 789
Query: 338 PMTKPVTVVAPQSPTFQANGTDSAFHVLAKPAHTALAPVAMPVRETNPWAHAPDAANKEI 397
T +P+ P T +A KP T A R+ AA K
Sbjct: 790 EPTPKALENSPKEPGVPTTKTPAA----TKPEMTTTAKDKTTERDLRTTPETTTAAPKMT 845
Query: 398 AATCSGTEWGQSS---------------------------GAASPGLFQAGHRRTPSEAD 430
T + TE S +P + T +E
Sbjct: 846 KETATTTEKTTESKITATTTQVTSTTTQDTTPFKITTLKTTTLAPKVTTTKKTITTTEIM 905
Query: 431 RWLEEVSK-SVRAQQPQASA-APLQPVLQPPPPTAISQPASPFQGNAFLTSQPVP---VG 485
EE +K RA +A+ P +P P PT+ +P + + T+ P P
Sbjct: 906 NKPEETAKPKDRATNSKATTPKPQKPTKAPKKPTSTKKPKTMPRVRKPKTT-PTPRKMTS 964
Query: 486 VVPALQPAFVPAQSYPVANGMPYPAPNVPVVGITP-SQMVANVFGTAGH----PQAAHPH 540
+P L P A++ P PN +V + P S+ G H P P
Sbjct: 965 TMPELNPTSRIAEAMLQTTTRPNQTPNSKLVEVNPKSEDAGGAEGETPHMLLRPHVFMPE 1024
Query: 541 QSPSL 545
+P +
Sbjct: 1025 VTPDM 1029
>gi|189181720 proteoglycan 4 isoform B [Homo sapiens]
Length = 1363
Score = 43.9 bits (102), Expect = 5e-04
Identities = 94/464 (20%), Positives = 150/464 (32%), Gaps = 78/464 (16%)
Query: 168 TATFDASRTTFTREG-SFRVTTATEQAEREEIMKQMQDAKKAETDKIVVGSSVAPGNTAP 226
T+T +TT +E S T+A + A +++ + KAET ++ P T P
Sbjct: 255 TSTDGKEKTTSAKETQSIEKTSAKDLAPTSKVLAK--PTPKAET------TTKGPALTTP 306
Query: 227 SPSSPTSPTSDATTSLEMNNPHAIPRRHAPIEQLARQGSFRGFPALSQKMSPFKRQLSLR 286
+PT+P A+T+ + P I + P ++ +P + +
Sbjct: 307 KEPTPTTPKEPASTTPKEPTPTTI----------------KSAPTTPKEPAPTTTKSAPT 350
Query: 287 INELPSTMQRKTDFPIKNAVPEVEGEAESISSLCSQITNAFSTPEDPFSSAPMTKPVTVV 346
+ P+ K P P+ + + +A +TP++P + P T
Sbjct: 351 TPKEPAPTTTKEPAP---TTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTP 407
Query: 347 APQSPTFQANGTDSAFHVLAKPAHTALAPVAMPVRETNPWAHAPDAAN--KEIAATCSGT 404
+PT T + +PA T P +E P A A KE A T
Sbjct: 408 KEPAPTTPKEPTPTT---PKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKE 464
Query: 405 EWGQSSGAASPGLFQAGHRRTPSEADRWLEEVSKSVRAQQPQASAAPLQPVLQPPPPTAI 464
++ SP TP E P + + +P P T
Sbjct: 465 PAPTTTKEPSP--------TTPKEP--------------APTTTKSAPTTTKEPAPTTTK 502
Query: 465 SQPASPFQGNAFLTSQPVPVGVVPALQPAFVPAQSYPVANGMPYPAPNVPVVGITPSQMV 524
S P +P + + T +P P P + P P P TP +
Sbjct: 503 SAPTTPKEPSPTTTKEPAPT----------TPKEPAPTTPKKPAPTTPKEPAPTTPKEPA 552
Query: 525 ANVFGTAGHPQAAHPHQSPSLVRQQTFPHYEASSATTSPFFKPPAQHLNGSAAFNGVDDG 584
T P P + ++T P T+P + L +
Sbjct: 553 PT---TTKKPAPTTPKEPAPTTPKETAPTTPKKLTPTTP------EKLAPTTPEKPAPTT 603
Query: 585 RLASADRHTEVPTGTCPVDPF-EAQWAALENKSKQRTNPSPTNP 627
A E PT T P +P AA N K+ P+PT P
Sbjct: 604 PEELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKE---PAPTTP 644
Score = 36.6 bits (83), Expect = 0.073
Identities = 78/365 (21%), Positives = 123/365 (33%), Gaps = 47/365 (12%)
Query: 221 PGNTAPSPSSPTSPTSDATTSLEMNNPHAIPRRHAPIEQLARQGSFRGFPALSQKMSP-F 279
P T P +PT+P A T+L+ P P++ AP ++LA + S K +P
Sbjct: 724 PAPTTPKEPAPTTPKGTAPTTLKEPAP-TTPKKPAP-KELAPTTTKGPTSTTSDKPAPTT 781
Query: 280 KRQLSLRINELPSTMQRKTDFPIKNAVPEVEGEAESISSLCSQITNAFSTPED--PFSSA 337
++ + + P+ K P P S + + T +P++ P SA
Sbjct: 782 PKETAPTTPKEPAPTTPKKPAPTTPETPPPTTSEVSTPTTTKEPTTIHKSPDESTPELSA 841
Query: 338 PMTKPVTVVAPQSPTFQANGTDSAFHVLAKPAHTALAPVAMPVRETNPWAHAPDAANKEI 397
T +P+ P T +A KP T A R+ AA K
Sbjct: 842 EPTPKALENSPKEPGVPTTKTPAA----TKPEMTTTAKDKTTERDLRTTPETTTAAPKMT 897
Query: 398 AATCSGTEWGQSS---------------------------GAASPGLFQAGHRRTPSEAD 430
T + TE S +P + T +E
Sbjct: 898 KETATTTEKTTESKITATTTQVTSTTTQDTTPFKITTLKTTTLAPKVTTTKKTITTTEIM 957
Query: 431 RWLEEVSK-SVRAQQPQASA-APLQPVLQPPPPTAISQPASPFQGNAFLTSQPVP---VG 485
EE +K RA +A+ P +P P PT+ +P + + T+ P P
Sbjct: 958 NKPEETAKPKDRATNSKATTPKPQKPTKAPKKPTSTKKPKTMPRVRKPKTT-PTPRKMTS 1016
Query: 486 VVPALQPAFVPAQSYPVANGMPYPAPNVPVVGITP-SQMVANVFGTAGH----PQAAHPH 540
+P L P A++ P PN +V + P S+ G H P P
Sbjct: 1017 TMPELNPTSRIAEAMLQTTTRPNQTPNSKLVEVNPKSEDAGGAEGETPHMLLRPHVFMPE 1076
Query: 541 QSPSL 545
+P +
Sbjct: 1077 VTPDM 1081
>gi|67190163 proteoglycan 4 isoform A [Homo sapiens]
Length = 1404
Score = 43.9 bits (102), Expect = 5e-04
Identities = 94/464 (20%), Positives = 150/464 (32%), Gaps = 78/464 (16%)
Query: 168 TATFDASRTTFTREG-SFRVTTATEQAEREEIMKQMQDAKKAETDKIVVGSSVAPGNTAP 226
T+T +TT +E S T+A + A +++ + KAET ++ P T P
Sbjct: 296 TSTDGKEKTTSAKETQSIEKTSAKDLAPTSKVLAK--PTPKAET------TTKGPALTTP 347
Query: 227 SPSSPTSPTSDATTSLEMNNPHAIPRRHAPIEQLARQGSFRGFPALSQKMSPFKRQLSLR 286
+PT+P A+T+ + P I + P ++ +P + +
Sbjct: 348 KEPTPTTPKEPASTTPKEPTPTTI----------------KSAPTTPKEPAPTTTKSAPT 391
Query: 287 INELPSTMQRKTDFPIKNAVPEVEGEAESISSLCSQITNAFSTPEDPFSSAPMTKPVTVV 346
+ P+ K P P+ + + +A +TP++P + P T
Sbjct: 392 TPKEPAPTTTKEPAP---TTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTP 448
Query: 347 APQSPTFQANGTDSAFHVLAKPAHTALAPVAMPVRETNPWAHAPDAAN--KEIAATCSGT 404
+PT T + +PA T P +E P A A KE A T
Sbjct: 449 KEPAPTTPKEPTPTT---PKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKE 505
Query: 405 EWGQSSGAASPGLFQAGHRRTPSEADRWLEEVSKSVRAQQPQASAAPLQPVLQPPPPTAI 464
++ SP TP E P + + +P P T
Sbjct: 506 PAPTTTKEPSP--------TTPKEP--------------APTTTKSAPTTTKEPAPTTTK 543
Query: 465 SQPASPFQGNAFLTSQPVPVGVVPALQPAFVPAQSYPVANGMPYPAPNVPVVGITPSQMV 524
S P +P + + T +P P P + P P P TP +
Sbjct: 544 SAPTTPKEPSPTTTKEPAPT----------TPKEPAPTTPKKPAPTTPKEPAPTTPKEPA 593
Query: 525 ANVFGTAGHPQAAHPHQSPSLVRQQTFPHYEASSATTSPFFKPPAQHLNGSAAFNGVDDG 584
T P P + ++T P T+P + L +
Sbjct: 594 PT---TTKKPAPTTPKEPAPTTPKETAPTTPKKLTPTTP------EKLAPTTPEKPAPTT 644
Query: 585 RLASADRHTEVPTGTCPVDPF-EAQWAALENKSKQRTNPSPTNP 627
A E PT T P +P AA N K+ P+PT P
Sbjct: 645 PEELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKE---PAPTTP 685
Score = 36.6 bits (83), Expect = 0.073
Identities = 78/365 (21%), Positives = 123/365 (33%), Gaps = 47/365 (12%)
Query: 221 PGNTAPSPSSPTSPTSDATTSLEMNNPHAIPRRHAPIEQLARQGSFRGFPALSQKMSP-F 279
P T P +PT+P A T+L+ P P++ AP ++LA + S K +P
Sbjct: 765 PAPTTPKEPAPTTPKGTAPTTLKEPAP-TTPKKPAP-KELAPTTTKGPTSTTSDKPAPTT 822
Query: 280 KRQLSLRINELPSTMQRKTDFPIKNAVPEVEGEAESISSLCSQITNAFSTPED--PFSSA 337
++ + + P+ K P P S + + T +P++ P SA
Sbjct: 823 PKETAPTTPKEPAPTTPKKPAPTTPETPPPTTSEVSTPTTTKEPTTIHKSPDESTPELSA 882
Query: 338 PMTKPVTVVAPQSPTFQANGTDSAFHVLAKPAHTALAPVAMPVRETNPWAHAPDAANKEI 397
T +P+ P T +A KP T A R+ AA K
Sbjct: 883 EPTPKALENSPKEPGVPTTKTPAA----TKPEMTTTAKDKTTERDLRTTPETTTAAPKMT 938
Query: 398 AATCSGTEWGQSS---------------------------GAASPGLFQAGHRRTPSEAD 430
T + TE S +P + T +E
Sbjct: 939 KETATTTEKTTESKITATTTQVTSTTTQDTTPFKITTLKTTTLAPKVTTTKKTITTTEIM 998
Query: 431 RWLEEVSK-SVRAQQPQASA-APLQPVLQPPPPTAISQPASPFQGNAFLTSQPVP---VG 485
EE +K RA +A+ P +P P PT+ +P + + T+ P P
Sbjct: 999 NKPEETAKPKDRATNSKATTPKPQKPTKAPKKPTSTKKPKTMPRVRKPKTT-PTPRKMTS 1057
Query: 486 VVPALQPAFVPAQSYPVANGMPYPAPNVPVVGITP-SQMVANVFGTAGH----PQAAHPH 540
+P L P A++ P PN +V + P S+ G H P P
Sbjct: 1058 TMPELNPTSRIAEAMLQTTTRPNQTPNSKLVEVNPKSEDAGGAEGETPHMLLRPHVFMPE 1117
Query: 541 QSPSL 545
+P +
Sbjct: 1118 VTPDM 1122
>gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 855
Score = 43.9 bits (102), Expect = 5e-04
Identities = 88/345 (25%), Positives = 118/345 (34%), Gaps = 67/345 (19%)
Query: 215 VGSSVAPGNTAPSPSSPTSPTSDATTSLEMNNPHAIPRRHAPIEQLARQG-SFRGFPALS 273
V S+ T PSP++ P++ L+ ++ P+ AR G S RG P
Sbjct: 209 VSSASEHSTTEPSPAARRRPSAGG--GLQRPASRSLSSSATPLSSPARSGPSARGTPRAP 266
Query: 274 QKMSPFKRQLSLRINELPSTMQRKTDFPIKNAVPEVEGEAESISSLCSQITNAFSTPEDP 333
S K + L + + P K+A P + P
Sbjct: 267 AHPSQPKPK------GLQALRPPQVTPPRKDAAPAL----------------------GP 298
Query: 334 FSSAPMTKPVTVVAPQS---PTFQANGTDSAFHV-LAKPAHTAL-APVAMPVRETNPWAH 388
SS+P+ P A QS PT A S+ LA P A +P A P +T P
Sbjct: 299 LSSSPLATPSPSAALQSQAPPTLPATPHSSSLTCQLATPLPLAPPSPSAPPSLQTLP--- 355
Query: 389 APDAANKEIAATCSGTEWGQSSGAASPGLFQAGHRRTPSEADRWLEEVSKSVRAQQPQAS 448
+P A A T G SP L QA H PS + PQA
Sbjct: 356 SPPATPPSQATTSLG----------SPTL-QATHSFLPSPP-------LSPLATPPPQAP 397
Query: 449 AAPLQPVLQPPP---------PTAISQPASPFQGNAFLTSQPVPVGVVPALQPAFVPAQS 499
A P LQ PP P A P +P L P P +Q F P S
Sbjct: 398 PALALPPLQAPPSPPASPPLSPLATPSPQAPNALAVHLLQAPFSPPPSPPVQAPFSPPAS 457
Query: 500 YPVANGMPYPAPNVPVVGITPSQMVANVFGTAG-HPQAAHPHQSP 543
PV+ P+ P + P Q+ + + P A P Q+P
Sbjct: 458 PPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAP 502
Score = 35.0 bits (79), Expect = 0.21
Identities = 89/376 (23%), Positives = 128/376 (34%), Gaps = 39/376 (10%)
Query: 222 GNTAPSPSSPTSPTSDATTSLE--MNNPHAIPRRHAPIEQLARQGSFRGFPALSQKMSPF 279
G A P T P DA +L ++P A P A ++ A + P S
Sbjct: 276 GLQALRPPQVTPPRKDAAPALGPLSSSPLATPSPSAALQSQAPP-TLPATPHSSSLTCQL 334
Query: 280 KRQLSLRINELPSTMQRKTDFPIKNAVPEVEGEAESISSLCSQITNAF--STPEDPFSSA 337
L L PS P A P + S+ S Q T++F S P P ++
Sbjct: 335 ATPLPLAPPS-PSAPPSLQTLPSPPATPPSQATT-SLGSPTLQATHSFLPSPPLSPLATP 392
Query: 338 PMTKPVTVVAP--QSPTFQANGTDSAFHVLAKPAHTALAPVAMPVRETNPWAHAPDAANK 395
P P + P Q+P + PA L+P+A P + P A A
Sbjct: 393 PPQAPPALALPPLQAPP-------------SPPASPPLSPLATPSPQA-PNALAVHLLQA 438
Query: 396 EIAATCSGTEWGQSSGAASPGLFQAGHRRTPSEADRWLEEVSKSVRAQQPQASAAPLQPV 455
+ S S ASP + + PS+A L V P A+P
Sbjct: 439 PFSPPPSPPVQAPFSPPASPPVSPSA--TPPSQAPPSLAAPPLQV---PPSPPASPPMSP 493
Query: 456 LQPPPPTAISQPASPFQGNAFLTSQPVPVGVVPALQPAFVPAQSYPVANGMPY-PAPNVP 514
PPP A A+P A Q P P LQ P S+P P+ P+ ++P
Sbjct: 494 SATPPPQAPPPLAAPPLQLAKPPPQAPPALATPPLQALPSPPASFP--GQAPFSPSASLP 551
Query: 515 VVGI-TPSQMVANVFGTAGHPQAAHPHQSPSLVRQQTFPHYEASSATTSPFF-------K 566
+ + TP V P SP+L + P ++ + P
Sbjct: 552 MSPLATPPPQAPPVLAAPLLQVPPSPPASPTLQAPRRPPTPGPDTSVSGPRLTLALAPGP 611
Query: 567 PPAQHLNGSAAFNGVD 582
PP + S+ +G D
Sbjct: 612 PPPPSRSPSSTLSGPD 627
>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 1124
Score = 43.9 bits (102), Expect = 5e-04
Identities = 98/401 (24%), Positives = 136/401 (33%), Gaps = 57/401 (14%)
Query: 220 APGNTAPS--PSSPTSPTSDATTSLE----MNNPHAI--PRRHAPIEQLARQG----SFR 267
+P T PS P S T+P A SL+ + PH++ P AP LA +
Sbjct: 359 SPPATPPSQAPPSMTTPPMQAPPSLQTIPPIQVPHSLTSPSLQAPPSPLALSSLQATTSL 418
Query: 268 GFPALSQK-----MSPFKRQLSLRINELPST-------MQRKTDFPIKNAVPEVEGEAES 315
G P L MSP + Q SL P++ +Q P + P + +
Sbjct: 419 GSPTLQATHSFLTMSPRQTQASLTSPSRPASTPPDSPPLQAPLSLPA--SPPLQTSLSPA 476
Query: 316 ISSLCSQITN---------AFSTPEDPFSSA---PMTKPVTVVAPQSPTFQANGTDSAFH 363
+S L S +T A +P+ P SS P+ ++ P T A+ T
Sbjct: 477 VSPLSSPLTIHPLQALSSLASHSPQAPLSSLIMPPLETQSSLAPPSLQTPPASLTTPPLE 536
Query: 364 VLAK----PAHTALAPVAMPVRETNPWAHAPDAANKEIAATCSGTEWGQSSGA----ASP 415
L P TA AP+ P ET P T E S A P
Sbjct: 537 NLPSLAPPPLQTASAPLTTPHLETPPCPAPCPLQAPPSPLTTPPPETPSSIATPPPQAPP 596
Query: 416 GLFQAGHRRTPSEADRWLEEVSKSVRAQQPQASAAPLQPVLQPPP-----PTAISQPASP 470
L + PS L ++ P + PLQ PP P A P +P
Sbjct: 597 ALASPPLQGLPSPP---LSPLATPPPQAPPXLALPPLQAPPSPPASPPLSPLATPSPQAP 653
Query: 471 FQGNAFLTSQPVPVGVVPALQPAFVPAQSYPVANGMPYPAPNVPVVGITPSQMVANVFGT 530
L P P +Q F P S PV+ P+ P + P Q+ + +
Sbjct: 654 NALAVHLLQAPFSPPPSPPVQAPFSPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPPAS 713
Query: 531 AG-HPQAAHPHQSPSLVRQQTF--PHYEASSATTSPFFKPP 568
P A P Q+P + P +S SP PP
Sbjct: 714 PPMSPSATPPPQAPPPLAAPPLQVPPSPPASPPMSPSATPP 754
Score = 38.9 bits (89), Expect = 0.015
Identities = 83/391 (21%), Positives = 140/391 (35%), Gaps = 75/391 (19%)
Query: 215 VGSSVAPGNTAPSPSSPTSPTSDATTSLEMNNPHAIPRRHAPIEQLARQG-SFRGFPALS 273
V S+ T PSP++ P++ L+ ++ P+ AR G S RG P
Sbjct: 209 VSSASEHSTTEPSPAARRRPSAGG--GLQRPASRSLSSSATPLSSPARSGPSARGTPRAP 266
Query: 274 Q----------------KMSPFKRQLSLRINEL---------PSTMQRKTDFPIKNAVPE 308
+++P ++ + + L PS + + P NA
Sbjct: 267 AHPSQPKPKGLQALRPPQVTPPRKDAAPALGPLSSSPLATPSPSGTKARPVPPPDNAATP 326
Query: 309 VEGEAESISSLCSQITNAFSTPEDPFSSAPMTKPVTVVAPQSPTFQANGTDSAFHVLAKP 368
+ L + + A +P P S + P P +P QA + + + A P
Sbjct: 327 LPATLPPSPPLATPLPLAPPSPSAPPSLQTLPSP-----PATPPSQAPPSMTTPPMQAPP 381
Query: 369 AHTALAPVAMPVRETNPWAHAPDA--ANKEIAATCSGTEWGQSSGAASPGLFQAGHRRTP 426
+ + P+ +P T+P AP + A + AT T G + A+ R+T
Sbjct: 382 SLQTIPPIQVPHSLTSPSLQAPPSPLALSSLQAT---TSLGSPTLQATHSFLTMSPRQTQ 438
Query: 427 SEADRWLEEVSKSVRAQQPQASAAPLQPVLQPPPPTAISQPASPFQGNAFLTSQPVPVGV 486
+ S+ + AS P P LQ P +S PASP P+ +
Sbjct: 439 A-----------SLTSPSRPASTPPDSPPLQAP----LSLPASP----------PLQTSL 473
Query: 487 VPALQPAFVPAQSYPV--ANGMPYPAPNVPVVGI------TPSQMVANVFGTAGHPQAAH 538
PA+ P P +P+ + + +P P+ + T S + T
Sbjct: 474 SPAVSPLSSPLTIHPLQALSSLASHSPQAPLSSLIMPPLETQSSLAPPSLQTPPASLTTP 533
Query: 539 PHQS-PSLVRQQTFPHYEASSATTSPFFKPP 568
P ++ PSL P AS+ T+P + P
Sbjct: 534 PLENLPSLAPP---PLQTASAPLTTPHLETP 561
Score = 34.7 bits (78), Expect = 0.28
Identities = 73/303 (24%), Positives = 107/303 (35%), Gaps = 34/303 (11%)
Query: 220 APGNTAPSPSSPTSPTSDATTSLEMNNPHAIPRRHAPIEQLARQGSFRGFPALSQKMSPF 279
AP PS T+P + +S+ P A P +P +G P S +SP
Sbjct: 565 APCPLQAPPSPLTTPPPETPSSIATPPPQAPPALASP--------PLQGLP--SPPLSPL 614
Query: 280 -----KRQLSLRINELPSTMQRKTDFPIKNAVPEVEGEAESISSLCSQITNA-FSTPEDP 333
+ L + L + P+ P ++ ++L + A FS P P
Sbjct: 615 ATPPPQAPPXLALPPLQAPPSPPASPPLS---PLATPSPQAPNALAVHLLQAPFSPPPSP 671
Query: 334 FSSAPMTKPVTVVAPQSPTFQANGTDSAFHVLAKPAHTALAPVAMPVRETNPWAHAPDAA 393
AP + P + S T + S + A P +P A P +P A P A
Sbjct: 672 PVQAPFSPPASPPVSPSATPPSQAPPS---LAAPPLQVPPSPPASP--PMSPSATPPPQA 726
Query: 394 NKEIAATCSGTEWGQSSGAASPGLFQAGHR--RTPSEADRWLEEVSKSVRAQQPQASAA- 450
+AA S ASP + + R P +V S A P + A
Sbjct: 727 PPPLAAPPLQVP---PSPPASPPMSPSATPPPRVPPLLAAPPLQVPPSPPASLPMSPLAK 783
Query: 451 -PLQ--PVLQPPPPTAISQPASPFQGNA-FLTSQPVPVGVVPALQPAFVPAQSYPVANGM 506
P Q P L PP A+ P + F G A F S +P+ + P P + P+
Sbjct: 784 PPPQAPPALATPPLQALPSPPASFPGQAPFSPSASLPMSPLATPPPQAPPVLAAPLLQVP 843
Query: 507 PYP 509
P P
Sbjct: 844 PSP 846
Score = 34.3 bits (77), Expect = 0.36
Identities = 56/253 (22%), Positives = 91/253 (35%), Gaps = 12/253 (4%)
Query: 382 ETNPWAHAPDAANKEIAATCSGTEWGQSSGAASPGLFQAGHRRTPSEADRWLEEVSKSVR 441
E +P A +A + S + ++ +SP R TP + K ++
Sbjct: 219 EPSPAARRRPSAGGGLQRPASRSLSSSATPLSSPARSGPSARGTPRAPAHPSQPKPKGLQ 278
Query: 442 AQQPQASAAPLQPVLQPPPPTAISQPASPFQGNAFLTSQPVPVGVVPALQPAFVPAQSYP 501
A +P P + P + S A+P P P L PA +P S P
Sbjct: 279 ALRPPQVTPPRKDAAPALGPLSSSPLATPSPSGTKARPVPPPDNAATPL-PATLPP-SPP 336
Query: 502 VANGMPY--PAPNVPVVGITPSQMVANVFGTAGHPQAAHPHQSPSLVRQQTFPHYEASSA 559
+A +P P+P+ P T A A P Q+P + QT P + +
Sbjct: 337 LATPLPLAPPSPSAPPSLQTLPSPPATPPSQAPPSMTTPPMQAPPSL--QTIPPIQVPHS 394
Query: 560 TTSPFFKPPAQHLNGSAAFNGVDDGRLASADRHTEVPTGTCPVDPFEAQWAALENKSKQR 619
TSP + P L S+ G H+ + + P + Q A+L + S+
Sbjct: 395 LTSPSLQAPPSPLALSSLQATTSLGSPTLQATHSFL-----TMSPRQTQ-ASLTSPSRPA 448
Query: 620 TNPSPTNPFSSDL 632
+ P + P + L
Sbjct: 449 STPPDSPPLQAPL 461
Score = 33.9 bits (76), Expect = 0.47
Identities = 50/205 (24%), Positives = 73/205 (35%), Gaps = 24/205 (11%)
Query: 307 PEVEGEAESISSLCSQITNAFSTPEDPFSSAPMTKPVTVVAPQSPTFQANGTDSAFHVLA 366
P EG +S+SS + ST E S A +P Q P + S+ L+
Sbjct: 200 PPTEGPRKSVSS-----ASEHSTTEP--SPAARRRPSAGGGLQRPA--SRSLSSSATPLS 250
Query: 367 KPAHTALAPVAMPVRETNPWAHAPDAANKEIAATCSGTEWGQSSGAASPGLFQAGHRRTP 426
PA + + P +P P A + A + G + TP
Sbjct: 251 SPARSGPSARGTPRAPAHPSQPKPKGLQ---ALRPPQVTPPRKDAAPALGPLSSSPLATP 307
Query: 427 SEADRWLEEVSKSVRAQQPQASAAPLQPVLQPPPPTAISQPASPFQGNAFLTSQPVPVGV 486
S + +K+ P +A PL L P PP A P +P +A + Q +P
Sbjct: 308 SPSG------TKARPVPPPDNAATPLPATLPPSPPLATPLPLAPPSPSAPPSLQTLP--- 358
Query: 487 VPALQPAFVPAQSYPVANGMPYPAP 511
PA P+Q+ P P AP
Sbjct: 359 ---SPPATPPSQAPPSMTTPPMQAP 380
>gi|91208418 transcription elongation regulator 1 isoform 2 [Homo
sapiens]
Length = 1077
Score = 43.9 bits (102), Expect = 5e-04
Identities = 34/97 (35%), Positives = 44/97 (45%), Gaps = 14/97 (14%)
Query: 424 RTPSEADRWLEEVSKSVRAQQPQASAAPLQPVLQPPPPTAISQPASPFQGNAFLTSQPVP 483
+TPS A + + +V P +A P+Q V QP P T PA P S P P
Sbjct: 304 QTPSSA---VSVATPTVSVSTPAPTATPVQTVPQPHPQTL--PPAVPH-------SVPQP 351
Query: 484 VGVVPALQPAFVPAQSYPVANGMPYPAPNVPVVGITP 520
+PA P VP P+ GMP P P V + G+ P
Sbjct: 352 TTAIPAFPPVMVPPFRVPLP-GMPIPLPGV-LPGMAP 386
Score = 32.3 bits (72), Expect = 1.4
Identities = 26/91 (28%), Positives = 37/91 (40%), Gaps = 17/91 (18%)
Query: 442 AQQPQASAAPLQPVLQPPPPTAISQ-----PASPFQGNAF---LTSQPVPVGVVPALQPA 493
A P A P+++PPPP + + P PF F + P P G+ P + P
Sbjct: 33 APPPNAVMRGPPPLMRPPPPFGMMRGPPPPPRPPFGRPPFDPNMPPMPPPGGIPPPMGPP 92
Query: 494 FV--------PAQSYPVANGMPYPAPNVPVV 516
+ P S P GM +P P +P V
Sbjct: 93 HLQRPPFMPPPMSSMPPPPGMMFP-PGMPPV 122
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.314 0.127 0.382
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 27,501,900
Number of Sequences: 37866
Number of extensions: 1452605
Number of successful extensions: 10375
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 522
Number of HSP's that attempted gapping in prelim test: 8403
Number of HSP's gapped (non-prelim): 1984
length of query: 640
length of database: 18,247,518
effective HSP length: 109
effective length of query: 531
effective length of database: 14,120,124
effective search space: 7497785844
effective search space used: 7497785844
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.