Search of human proteins with 196123589

Search of human proteins with 196123589

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|196123589 NADH dehydrogenase subunit 5 [Homo sapiens
neanderthalensis]
         (603 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|196123589 NADH dehydrogenase subunit 5 [Homo sapiens neandert...  1194   0.0  
gi|251831117 NADH dehydrogenase subunit 5 [Homo sapiens]             1179   0.0  
gi|196123588 NADH dehydrogenase subunit 4 [Homo sapiens neandert...    73   9e-13
gi|251831116 NADH dehydrogenase subunit 4 [Homo sapiens]               73   9e-13
gi|196123580 NADH dehydrogenase subunit 2 [Homo sapiens neandert...    67   5e-11
gi|251831108 NADH dehydrogenase subunit 2 [Homo sapiens]               67   5e-11
gi|31542943 solute carrier family 35, member F2 [Homo sapiens]         35   0.20 
gi|4502659 sialic acid binding Ig-like lectin 5 [Homo sapiens]         32   1.3  
gi|148762980 sialic acid binding Ig-like lectin 14 [Homo sapiens]      32   1.3  
gi|196123585 cytochrome c oxidase subunit III [Homo sapiens nean...    32   2.2  
gi|251831113 cytochrome c oxidase subunit III [Homo sapiens]           32   2.2  
gi|7705268 family with sequence similarity 8, member A1 [Homo sa...    32   2.2  
gi|42822882 fat-inducing transcript 1 [Homo sapiens]                   31   3.7  
gi|194018482 NLR family, pyrin domain containing 4 [Homo sapiens]      31   3.7  
gi|59710093 G-protein coupled receptor 112 [Homo sapiens]              31   3.7  
gi|115529471 olfactory receptor, family 1, subfamily C, member 1...    30   6.4  
gi|54633317 thioredoxin domain containing 11 [Homo sapiens]            30   6.4  
gi|17998700 phosphatidylinositol glycan anchor biosynthesis, cla...    30   8.3  

>gi|196123589 NADH dehydrogenase subunit 5 [Homo sapiens
           neanderthalensis]
          Length = 603

 Score = 1194 bits (3088), Expect = 0.0
 Identities = 603/603 (100%), Positives = 603/603 (100%)

Query: 1   MTMHTTMTTLTLTSLIPPILTTLINPNKKNSYPHYVKSIVASTFIISLFPTTMFMCLDQE 60
           MTMHTTMTTLTLTSLIPPILTTLINPNKKNSYPHYVKSIVASTFIISLFPTTMFMCLDQE
Sbjct: 1   MTMHTTMTTLTLTSLIPPILTTLINPNKKNSYPHYVKSIVASTFIISLFPTTMFMCLDQE 60

Query: 61  VIISNWHWATTQTTQLSLSFKLDYFSMMFIPVALFVTWSIMEFSLWYMNSDPNINQFFKY 120
           VIISNWHWATTQTTQLSLSFKLDYFSMMFIPVALFVTWSIMEFSLWYMNSDPNINQFFKY
Sbjct: 61  VIISNWHWATTQTTQLSLSFKLDYFSMMFIPVALFVTWSIMEFSLWYMNSDPNINQFFKY 120

Query: 121 LLIFLITMLILVTANNLFQLFIGWEGVGIMSFLLISWWYARADANTAAIQAILYNRIGDI 180
           LLIFLITMLILVTANNLFQLFIGWEGVGIMSFLLISWWYARADANTAAIQAILYNRIGDI
Sbjct: 121 LLIFLITMLILVTANNLFQLFIGWEGVGIMSFLLISWWYARADANTAAIQAILYNRIGDI 180

Query: 181 GFILALAWFILHSNSWDPQQMALLNANPSLTPLLGLLLAAAGKSAQLGLHPWLPSAMEGP 240
           GFILALAWFILHSNSWDPQQMALLNANPSLTPLLGLLLAAAGKSAQLGLHPWLPSAMEGP
Sbjct: 181 GFILALAWFILHSNSWDPQQMALLNANPSLTPLLGLLLAAAGKSAQLGLHPWLPSAMEGP 240

Query: 241 TPVSALLHSSTMVVAGVFLLIRFHPLAENSPLIQTLTLCLGAITTLFAAVCALTQNDIKK 300
           TPVSALLHSSTMVVAGVFLLIRFHPLAENSPLIQTLTLCLGAITTLFAAVCALTQNDIKK
Sbjct: 241 TPVSALLHSSTMVVAGVFLLIRFHPLAENSPLIQTLTLCLGAITTLFAAVCALTQNDIKK 300

Query: 301 IVAFSTSSQLGLMVVTIGINQPHLAFLHICTHAFFKAMLFMCSGSIIHNLNNEQDIRKMG 360
           IVAFSTSSQLGLMVVTIGINQPHLAFLHICTHAFFKAMLFMCSGSIIHNLNNEQDIRKMG
Sbjct: 301 IVAFSTSSQLGLMVVTIGINQPHLAFLHICTHAFFKAMLFMCSGSIIHNLNNEQDIRKMG 360

Query: 361 GLLKTMPLTSTSLTIGSLALAGMPFLTGFYSKDHIIETANMSYTNAWALSITLIATSLTS 420
           GLLKTMPLTSTSLTIGSLALAGMPFLTGFYSKDHIIETANMSYTNAWALSITLIATSLTS
Sbjct: 361 GLLKTMPLTSTSLTIGSLALAGMPFLTGFYSKDHIIETANMSYTNAWALSITLIATSLTS 420

Query: 421 AYSTRMILLTLTGQPRFPTLTNINENNPTLLNPIKRLAAGSLFAGFLITNNISPASPFQT 480
           AYSTRMILLTLTGQPRFPTLTNINENNPTLLNPIKRLAAGSLFAGFLITNNISPASPFQT
Sbjct: 421 AYSTRMILLTLTGQPRFPTLTNINENNPTLLNPIKRLAAGSLFAGFLITNNISPASPFQT 480

Query: 481 TIPLYLKLAALAVTFLGLLTALDLNYLTNKLKMKTPLYTFYFSNMLGFYPSITHRTIPYL 540
           TIPLYLKLAALAVTFLGLLTALDLNYLTNKLKMKTPLYTFYFSNMLGFYPSITHRTIPYL
Sbjct: 481 TIPLYLKLAALAVTFLGLLTALDLNYLTNKLKMKTPLYTFYFSNMLGFYPSITHRTIPYL 540

Query: 541 GLLTSQNLPLLLLDLTWLEKLLPKTISQHQISASITTSTQKGMIKLYFLSFFFPLILTLL 600
           GLLTSQNLPLLLLDLTWLEKLLPKTISQHQISASITTSTQKGMIKLYFLSFFFPLILTLL
Sbjct: 541 GLLTSQNLPLLLLDLTWLEKLLPKTISQHQISASITTSTQKGMIKLYFLSFFFPLILTLL 600

Query: 601 LIM 603
           LIM
Sbjct: 601 LIM 603


>gi|251831117 NADH dehydrogenase subunit 5 [Homo sapiens]
          Length = 603

 Score = 1179 bits (3051), Expect = 0.0
 Identities = 594/602 (98%), Positives = 598/602 (99%)

Query: 1   MTMHTTMTTLTLTSLIPPILTTLINPNKKNSYPHYVKSIVASTFIISLFPTTMFMCLDQE 60
           MTMHTTMTTLTLTSLIPPILTTL+NPNKKNSYPHYVKSIVASTFIISLFPTTMFMCLDQE
Sbjct: 1   MTMHTTMTTLTLTSLIPPILTTLVNPNKKNSYPHYVKSIVASTFIISLFPTTMFMCLDQE 60

Query: 61  VIISNWHWATTQTTQLSLSFKLDYFSMMFIPVALFVTWSIMEFSLWYMNSDPNINQFFKY 120
           VIISNWHWATTQTTQLSLSFKLDYFSMMFIPVALFVTWSIMEFSLWYMNSDPNINQFFKY
Sbjct: 61  VIISNWHWATTQTTQLSLSFKLDYFSMMFIPVALFVTWSIMEFSLWYMNSDPNINQFFKY 120

Query: 121 LLIFLITMLILVTANNLFQLFIGWEGVGIMSFLLISWWYARADANTAAIQAILYNRIGDI 180
           LLIFLITMLILVTANNLFQLFIGWEGVGIMSFLLISWWYARADANTAAIQAILYNRIGDI
Sbjct: 121 LLIFLITMLILVTANNLFQLFIGWEGVGIMSFLLISWWYARADANTAAIQAILYNRIGDI 180

Query: 181 GFILALAWFILHSNSWDPQQMALLNANPSLTPLLGLLLAAAGKSAQLGLHPWLPSAMEGP 240
           GFILALAWFILHSNSWDPQQMALLNANPSLTPLLGLLLAAAGKSAQLGLHPWLPSAMEGP
Sbjct: 181 GFILALAWFILHSNSWDPQQMALLNANPSLTPLLGLLLAAAGKSAQLGLHPWLPSAMEGP 240

Query: 241 TPVSALLHSSTMVVAGVFLLIRFHPLAENSPLIQTLTLCLGAITTLFAAVCALTQNDIKK 300
           TPVSALLHSSTMVVAG+FLLIRFHPLAENSPLIQTLTLCLGAITTLFAAVCALTQNDIKK
Sbjct: 241 TPVSALLHSSTMVVAGIFLLIRFHPLAENSPLIQTLTLCLGAITTLFAAVCALTQNDIKK 300

Query: 301 IVAFSTSSQLGLMVVTIGINQPHLAFLHICTHAFFKAMLFMCSGSIIHNLNNEQDIRKMG 360
           IVAFSTSSQLGLM+VTIGINQPHLAFLHICTHAFFKAMLFMCSGSIIHNLNNEQDIRKMG
Sbjct: 301 IVAFSTSSQLGLMMVTIGINQPHLAFLHICTHAFFKAMLFMCSGSIIHNLNNEQDIRKMG 360

Query: 361 GLLKTMPLTSTSLTIGSLALAGMPFLTGFYSKDHIIETANMSYTNAWALSITLIATSLTS 420
           GLLKTMPLTSTSLTIGSLALAGMPFLTGFYSKDHIIETANMSYTNAWALSITLIATSLTS
Sbjct: 361 GLLKTMPLTSTSLTIGSLALAGMPFLTGFYSKDHIIETANMSYTNAWALSITLIATSLTS 420

Query: 421 AYSTRMILLTLTGQPRFPTLTNINENNPTLLNPIKRLAAGSLFAGFLITNNISPASPFQT 480
           AYSTRMILLTLTGQPRFPTLTNINENNPTLLNPIKRLAAGSLFAGFLITNNISPASPFQT
Sbjct: 421 AYSTRMILLTLTGQPRFPTLTNINENNPTLLNPIKRLAAGSLFAGFLITNNISPASPFQT 480

Query: 481 TIPLYLKLAALAVTFLGLLTALDLNYLTNKLKMKTPLYTFYFSNMLGFYPSITHRTIPYL 540
           TIPLYLKL ALAVTFLGLLTALDLNYLTNKLKMK+PL TFYFSNMLGFYPSITHRTIPYL
Sbjct: 481 TIPLYLKLTALAVTFLGLLTALDLNYLTNKLKMKSPLCTFYFSNMLGFYPSITHRTIPYL 540

Query: 541 GLLTSQNLPLLLLDLTWLEKLLPKTISQHQISASITTSTQKGMIKLYFLSFFFPLILTLL 600
           GLLTSQNLPLLLLDLTWLEKLLPKTISQHQIS SI TSTQKGMIKLYFLSFFFPLILTLL
Sbjct: 541 GLLTSQNLPLLLLDLTWLEKLLPKTISQHQISTSIITSTQKGMIKLYFLSFFFPLILTLL 600

Query: 601 LI 602
           LI
Sbjct: 601 LI 602


>gi|196123588 NADH dehydrogenase subunit 4 [Homo sapiens
           neanderthalensis]
          Length = 459

 Score = 72.8 bits (177), Expect = 9e-13
 Identities = 88/367 (23%), Positives = 160/367 (43%), Gaps = 37/367 (10%)

Query: 91  PVALFVTWSI---MEFSLWYMNSDPNINQ--FFKYLLIFLITMLILVTANNLFQLFIGWE 145
           P+ +  TW +   +  S  +++S+P   +  +   L+   I++++  TA  L   +I +E
Sbjct: 64  PLLMLTTWLLPLTIMASQRHLSSEPLSRKKLYLSMLISLQISLIMTFTATELIMFYIFFE 123

Query: 146 GVGIMSFLLISWWYARADANTAAIQAILYNRIGDIGFILALAWFILHSNSWDPQQMALL- 204
              I +  +I+ W  + +   A    + Y  +G +  ++AL   I   N+     + LL 
Sbjct: 124 TTLIPTLAIITRWGNQPERLNAGTYFLFYTLVGSLPLLIAL---IYTHNTLGSLNILLLT 180

Query: 205 -------NANPSLTPLLGLLLAAAGKSAQLGLHPWLPSA-MEGPTPVSALLHSSTMVVAG 256
                  N+  +    L   +A   K    GLH WLP A +E P   S +L +  + + G
Sbjct: 181 LTAQELSNSWANNLMWLAYTMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGG 240

Query: 257 ---VFLLIRFHPLAENSPLIQTLTLCLGAITTLFAAVCALTQNDIKKIVAFSTSSQLGLM 313
              + L +  +PL ++      +    G I T  +++C L Q D+K ++A+S+ S + L+
Sbjct: 241 YGMMRLTLILNPLTKHMAYPFLVLSLWGMIMT--SSIC-LRQTDLKSLIAYSSISHMALV 297

Query: 314 VVTIGINQPHL---AFLHICTHAFFKAMLFMCSGSIIHNLNNEQDIRKMGGLLKTMPLTS 370
           V  I I  P     A + +  H    ++LF  + S     ++   I    GL   +PL +
Sbjct: 298 VTAILIQTPWSFTGAVILMIAHGLTSSLLFCLANSNYERTHSRIMILSQ-GLQTLLPLMA 356

Query: 371 TSLTIGSLALAGMPFLTGFYSKDHIIETANMSYTNAWALSITLIATSL----TSAYSTRM 426
               + SLA   +P       +  ++ T     T +W+ +ITL+ T L    T+ YS  M
Sbjct: 357 FWWLLASLANLALPPTINLLGELSVLVT-----TFSWS-NITLLLTGLNMLVTALYSLYM 410

Query: 427 ILLTLTG 433
              T  G
Sbjct: 411 FTTTQWG 417


>gi|251831116 NADH dehydrogenase subunit 4 [Homo sapiens]
          Length = 459

 Score = 72.8 bits (177), Expect = 9e-13
 Identities = 88/367 (23%), Positives = 160/367 (43%), Gaps = 37/367 (10%)

Query: 91  PVALFVTWSI---MEFSLWYMNSDPNINQ--FFKYLLIFLITMLILVTANNLFQLFIGWE 145
           P+ +  TW +   +  S  +++S+P   +  +   L+   I++++  TA  L   +I +E
Sbjct: 64  PLLMLTTWLLPLTIMASQRHLSSEPLSRKKLYLSMLISLQISLIMTFTATELIMFYIFFE 123

Query: 146 GVGIMSFLLISWWYARADANTAAIQAILYNRIGDIGFILALAWFILHSNSWDPQQMALL- 204
              I +  +I+ W  + +   A    + Y  +G +  ++AL   I   N+     + LL 
Sbjct: 124 TTLIPTLAIITRWGNQPERLNAGTYFLFYTLVGSLPLLIAL---IYTHNTLGSLNILLLT 180

Query: 205 -------NANPSLTPLLGLLLAAAGKSAQLGLHPWLPSA-MEGPTPVSALLHSSTMVVAG 256
                  N+  +    L   +A   K    GLH WLP A +E P   S +L +  + + G
Sbjct: 181 LTAQELSNSWANNLMWLAYTMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGG 240

Query: 257 ---VFLLIRFHPLAENSPLIQTLTLCLGAITTLFAAVCALTQNDIKKIVAFSTSSQLGLM 313
              + L +  +PL ++      +    G I T  +++C L Q D+K ++A+S+ S + L+
Sbjct: 241 YGMMRLTLILNPLTKHMAYPFLVLSLWGMIMT--SSIC-LRQTDLKSLIAYSSISHMALV 297

Query: 314 VVTIGINQPHL---AFLHICTHAFFKAMLFMCSGSIIHNLNNEQDIRKMGGLLKTMPLTS 370
           V  I I  P     A + +  H    ++LF  + S     ++   I    GL   +PL +
Sbjct: 298 VTAILIQTPWSFTGAVILMIAHGLTSSLLFCLANSNYERTHSRIMILSQ-GLQTLLPLMA 356

Query: 371 TSLTIGSLALAGMPFLTGFYSKDHIIETANMSYTNAWALSITLIATSL----TSAYSTRM 426
               + SLA   +P       +  ++ T     T +W+ +ITL+ T L    T+ YS  M
Sbjct: 357 FWWLLASLANLALPPTINLLGELSVLVT-----TFSWS-NITLLLTGLNMLVTALYSLYM 410

Query: 427 ILLTLTG 433
              T  G
Sbjct: 411 FTTTQWG 417


>gi|196123580 NADH dehydrogenase subunit 2 [Homo sapiens
           neanderthalensis]
          Length = 347

 Score = 67.0 bits (162), Expect = 5e-11
 Identities = 86/361 (23%), Positives = 153/361 (42%), Gaps = 57/361 (15%)

Query: 120 YLLIFLITMLILVTANNLFQLFIGWEGVGIMSFLLISWWYARADANTAAIQAILYNRIGD 179
           Y  IF  T LI   +++ F  ++G E + +++F+ +        +  AAI+  L      
Sbjct: 10  YSTIFAGT-LITALSSHWFFTWVGLE-MNMLAFIPVLTKKMNPRSTEAAIKYFLTQATAS 67

Query: 180 IGFILALAWFILHSNSWDPQQMALLNANPSLTPLLGLLLAAAGKSAQLGLHPWLPSAMEG 239
           +  ++A+ +  + S  W      + N     + L+ +++A A K      H W+P   +G
Sbjct: 68  MILLMAILFNNMLSGQW-----TMTNTTNQYSSLM-IMMAMAMKLGMAPFHFWVPEVTQG 121

Query: 240 PTPVSALLHSSTMVVAGVFLLIRFHPLAENSPLIQTLTLCLGAITTLFAAVCALTQNDIK 299
               S LL  +   +A + ++ +  P      L  +L L L  ++ +  +   L Q  ++
Sbjct: 122 TPLTSGLLLLTWQKLAPISIMYQISP-----SLNVSLLLTLSILSIMAGSWGGLNQTQLR 176

Query: 300 KIVAFSTSSQLGLMVVTIGINQPHLAFLHICTHAFFKAMLFMCSGSIIHNLNNEQDI--- 356
           KI+A+S+ + +G M+  +  N P++  L++  +       F     ++ NLN+       
Sbjct: 177 KILAYSSITHMGWMMAVLPYN-PNMTILNLTIYIILTTTAF-----LLLNLNSSTTTLLL 230

Query: 357 -RKMGGLLKTMPLTSTSLTIGSLALAGMPFLTGFYSKDHIIETANMSYTNAWALSITLIA 415
            R    L    PL  ++L    L+L G+P LTGF  K  IIE     +T   +L I  I 
Sbjct: 231 SRTWNKLTWLTPLIPSTL----LSLGGLPPLTGFLPKWAIIE----EFTKNNSLIIPTIM 282

Query: 416 TSLT---------SAYSTRMILLTLTGQ-------------PRFPTLTNINENNPTLLNP 453
            ++T           YST + LL ++               P  PTL  +     TLL P
Sbjct: 283 ATITLLNLYFYLRLIYSTSITLLPMSNNVKMKWQFEHTKPTPFLPTLITLT----TLLLP 338

Query: 454 I 454
           I
Sbjct: 339 I 339


>gi|251831108 NADH dehydrogenase subunit 2 [Homo sapiens]
          Length = 347

 Score = 67.0 bits (162), Expect = 5e-11
 Identities = 88/376 (23%), Positives = 158/376 (42%), Gaps = 52/376 (13%)

Query: 120 YLLIFLITMLILVTANNLFQLFIGWEGVGIMSFLLISWWYARADANTAAIQAILYNRIGD 179
           Y  IF  T LI   +++ F  ++G E + +++F+ +        +  AAI+  L      
Sbjct: 10  YSTIFAGT-LITALSSHWFFTWVGLE-MNMLAFIPVLTKKMNPRSTEAAIKYFLTQATAS 67

Query: 180 IGFILALAWFILHSNSWDPQQMALLNANPSLTPLLGLLLAAAGKSAQLGLHPWLPSAMEG 239
           +  ++A+ +  + S  W      + N     + L+ +++A A K      H W+P   +G
Sbjct: 68  MILLMAILFNNMLSGQW-----TMTNTTNQYSSLM-IMMAMAMKLGMAPFHFWVPEVTQG 121

Query: 240 PTPVSALLHSSTMVVAGVFLLIRFHPLAENSPLIQTLTLCLGAITTLFAAVCALTQNDIK 299
               S LL  +   +A + ++ +  P      L  +L L L  ++ +  +   L Q  ++
Sbjct: 122 TPLTSGLLLLTWQKLAPISIMYQISP-----SLNVSLLLTLSILSIMAGSWGGLNQTQLR 176

Query: 300 KIVAFSTSSQLGLMVVTIGINQPHLAFLHICTHAFFKAMLFMCSGSIIHNLNNEQDI--- 356
           KI+A+S+ + +G M+  +  N P++  L++  +       F     ++ NLN+       
Sbjct: 177 KILAYSSITHMGWMMAVLPYN-PNMTILNLTIYIILTTTAF-----LLLNLNSSTTTLLL 230

Query: 357 -RKMGGLLKTMPLTSTSLTIGSLALAGMPFLTGFYSKDHIIETANMSYTNAWALSITLIA 415
            R    L    PL  ++L    L+L G+P LTGF  K  IIE     +T   +L I  I 
Sbjct: 231 SRTWNKLTWLTPLIPSTL----LSLGGLPPLTGFLPKWAIIE----EFTKNNSLIIPTIM 282

Query: 416 TSLT---------SAYSTRMILLTLTGQPRFPTLTNINENNPTLLNPIKRLAAGSLFAGF 466
            ++T           YST + LL ++   +           PT   P       +L A  
Sbjct: 283 ATITLLNLYFYLRLIYSTSITLLPMSNNVKMK--WQFEHTKPTPFLP-------TLIA-- 331

Query: 467 LITNNISPASPFQTTI 482
            +T  + P SPF   I
Sbjct: 332 -LTTLLLPISPFMLMI 346


>gi|31542943 solute carrier family 35, member F2 [Homo sapiens]
          Length = 374

 Score = 35.0 bits (79), Expect = 0.20
 Identities = 25/101 (24%), Positives = 41/101 (40%), Gaps = 23/101 (22%)

Query: 107 YMNSDPNINQFFKYLLIFLITMLILVTANNLFQLFIGWEGVGIMSFLLISWW------YA 160
           Y  + P +  F  Y L+FLI  ++L   +    L +          L   WW       A
Sbjct: 67  YKVNTPMLQSFINYCLLFLIYTVMLAFRSGSDNLLV---------ILKRKWWKYILLGLA 117

Query: 161 RADANTAAIQAILYNRIGDIGFI--------LALAWFILHS 193
             +AN   ++A  Y  +  +  +        +AL+WFILH+
Sbjct: 118 DVEANYVIVRAYQYTTLTSVQLLDCFGIPVLMALSWFILHA 158


>gi|4502659 sialic acid binding Ig-like lectin 5 [Homo sapiens]
          Length = 551

 Score = 32.3 bits (72), Expect = 1.3
 Identities = 19/47 (40%), Positives = 26/47 (55%), Gaps = 2/47 (4%)

Query: 548 LPLLLLDLTWLEKLLPKTISQHQISASITTSTQKGMIKLYFLSFFFP 594
           LPLLLL L W   L  K + + Q+  S+T   Q+G+  L   SF +P
Sbjct: 2   LPLLLLPLLWGGSLQEKPVYELQVQKSVT--VQEGLCVLVPCSFSYP 46


>gi|148762980 sialic acid binding Ig-like lectin 14 [Homo sapiens]
          Length = 396

 Score = 32.3 bits (72), Expect = 1.3
 Identities = 19/47 (40%), Positives = 26/47 (55%), Gaps = 2/47 (4%)

Query: 548 LPLLLLDLTWLEKLLPKTISQHQISASITTSTQKGMIKLYFLSFFFP 594
           LPLLLL L W   L  K + + Q+  S+T   Q+G+  L   SF +P
Sbjct: 2   LPLLLLPLLWGGSLQEKPVYELQVQKSVT--VQEGLCVLVPCSFSYP 46


>gi|196123585 cytochrome c oxidase subunit III [Homo sapiens
           neanderthalensis]
          Length = 260

 Score = 31.6 bits (70), Expect = 2.2
 Identities = 25/69 (36%), Positives = 37/69 (53%), Gaps = 6/69 (8%)

Query: 226 QLGLHPWLPSAMEGPTPVSA-LLHSSTMVVAGVFLLIRFHPLAEN--SPLIQTL--TLCL 280
           QLG H W P+ +    P+   LL++S ++ +GV +    H L EN  + +IQ L  T+ L
Sbjct: 111 QLGGH-WPPTGITPLNPLEVPLLNTSVLLASGVSITWAHHSLMENNRNQMIQALLITILL 169

Query: 281 GAITTLFAA 289
           G   TL  A
Sbjct: 170 GLYFTLLQA 178


>gi|251831113 cytochrome c oxidase subunit III [Homo sapiens]
          Length = 261

 Score = 31.6 bits (70), Expect = 2.2
 Identities = 25/69 (36%), Positives = 37/69 (53%), Gaps = 6/69 (8%)

Query: 226 QLGLHPWLPSAMEGPTPVSA-LLHSSTMVVAGVFLLIRFHPLAEN--SPLIQTL--TLCL 280
           QLG H W P+ +    P+   LL++S ++ +GV +    H L EN  + +IQ L  T+ L
Sbjct: 111 QLGGH-WPPTGITPLNPLEVPLLNTSVLLASGVSITWAHHSLMENNRNQMIQALLITILL 169

Query: 281 GAITTLFAA 289
           G   TL  A
Sbjct: 170 GLYFTLLQA 178


>gi|7705268 family with sequence similarity 8, member A1 [Homo
           sapiens]
          Length = 413

 Score = 31.6 bits (70), Expect = 2.2
 Identities = 14/29 (48%), Positives = 21/29 (72%)

Query: 572 SASITTSTQKGMIKLYFLSFFFPLILTLL 600
           + SITTST + +IK + ++ FFP  +TLL
Sbjct: 361 NVSITTSTIRALIKNFSIASFFPAFITLL 389


>gi|42822882 fat-inducing transcript 1 [Homo sapiens]
          Length = 292

 Score = 30.8 bits (68), Expect = 3.7
 Identities = 18/41 (43%), Positives = 25/41 (60%), Gaps = 4/41 (9%)

Query: 118 FKYLLIFLITMLILVTANNLFQLFIG---WEGVGIMSFLLI 155
           F  L++FL T  + VTA +L +L +G   W G G  +FLLI
Sbjct: 106 FVLLVVFLATRRVAVTARHLSRLVVGAAVWRGAG-RAFLLI 145


>gi|194018482 NLR family, pyrin domain containing 4 [Homo sapiens]
          Length = 994

 Score = 30.8 bits (68), Expect = 3.7
 Identities = 26/111 (23%), Positives = 44/111 (39%), Gaps = 7/111 (6%)

Query: 245 ALLHSSTMVVAGVFLLIRFHPLAENSPLIQTL----TLCLGAITTLFAAVCALTQNDIKK 300
           AL   ST  V   F+   F P     P  QT      LC  A   ++       ++D+++
Sbjct: 362 ALTCQSTTSVYSSFVFNLFTPEGAEGPTPQTQHQLKALCSLAAEGMWTDTFEFCEDDLRR 421

Query: 301 --IVAFSTSSQLGLMVVT-IGINQPHLAFLHICTHAFFKAMLFMCSGSIIH 348
             +V     + LG  ++   G  +    FLH+C   F  A+ ++    + H
Sbjct: 422 NGVVDADIPALLGTKILLKYGERESSYVFLHVCIQEFCAALFYLLKSHLDH 472


>gi|59710093 G-protein coupled receptor 112 [Homo sapiens]
          Length = 3080

 Score = 30.8 bits (68), Expect = 3.7
 Identities = 27/91 (29%), Positives = 38/91 (41%), Gaps = 5/91 (5%)

Query: 365  TMPLTSTSLTIGSLALAGMPFLTGFYSKDHIIETANMSYTNAWALSITLIATSLT-SAYS 423
            + PL ST +T    A    P ++ F+    +  T +   T A   S +  AT  T S Y+
Sbjct: 2192 SFPLISTGVTYPFTATVSSP-ISSFFETTWLDSTPSFLSTEA---STSPTATKSTVSFYN 2247

Query: 424  TRMILLTLTGQPRFPTLTNINENNPTLLNPI 454
              M       +PR P  + INE     LN I
Sbjct: 2248 VEMSFSVFVEEPRIPITSVINEFTENSLNSI 2278


>gi|115529471 olfactory receptor, family 1, subfamily C, member 1
           [Homo sapiens]
          Length = 314

 Score = 30.0 bits (66), Expect = 6.4
 Identities = 41/174 (23%), Positives = 65/174 (37%), Gaps = 30/174 (17%)

Query: 243 VSALLHSSTMVVAGVFLLIRFHPLAENSPLIQTLTLCLGAITTLFAAVCALTQNDIKKIV 302
           V+ L  + T+  AG    + F     N   + +L LC+ A    + A+C       +  +
Sbjct: 83  VNILTGTKTISFAGCLTQLFFFVSFVN---MDSLLLCVMAYDR-YVAICHPLHYTARMNL 138

Query: 303 AFSTSSQLGLMVVTIGINQPHLAFLHICTHAFFKAMLFMCSGSIIH----NLN------- 351
                   GL +VT         +LH   H    A L  C+ +IIH    +LN       
Sbjct: 139 CLCVQLVAGLWLVT---------YLHALLHTVLIAQLSFCASNIIHHFFCDLNPLLQLSC 189

Query: 352 -----NEQDIRKMGGLLKTMPLTSTSLTIGSLALAGMPFLTGFYSKDHIIETAN 400
                N   I  +GGLL   PL    ++ G L  + +  +T    K   + T +
Sbjct: 190 SDVSFNVMIIFAVGGLLALTPLVCILVSYG-LIFSTVLKITSTQGKQRAVSTCS 242


>gi|54633317 thioredoxin domain containing 11 [Homo sapiens]
          Length = 958

 Score = 30.0 bits (66), Expect = 6.4
 Identities = 15/34 (44%), Positives = 21/34 (61%)

Query: 244 SALLHSSTMVVAGVFLLIRFHPLAENSPLIQTLT 277
           S LL++       +FL I F+PLAE+ PLI  +T
Sbjct: 338 SLLLNNELKKGPALFLFIPFNPLAESHPLIDEIT 371


>gi|17998700 phosphatidylinositol glycan anchor biosynthesis, class
           U [Homo sapiens]
          Length = 435

 Score = 29.6 bits (65), Expect = 8.3
 Identities = 19/66 (28%), Positives = 33/66 (50%), Gaps = 13/66 (19%)

Query: 151 SFLLISWWYARADANTAAIQAILYNRIGDIGFILALAWFILHSNSWDPQQMALLNANPSL 210
           +F + SW YA           ++Y  +G +  I+ L++F+L S  + P     + + P L
Sbjct: 221 AFWIFSWEYA-----------MMY--VGSLVVIICLSFFLLSSWDFIPAVYGFILSVPDL 267

Query: 211 TPLLGL 216
           TP +GL
Sbjct: 268 TPNIGL 273


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.326    0.137    0.415 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,620,429
Number of Sequences: 37866
Number of extensions: 787598
Number of successful extensions: 2555
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 2534
Number of HSP's gapped (non-prelim): 27
length of query: 603
length of database: 18,247,518
effective HSP length: 108
effective length of query: 495
effective length of database: 14,157,990
effective search space: 7008205050
effective search space used: 7008205050
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.