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Search of human proteins with 113415138
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|113415138 PREDICTED: similar to SVH protein isoform 2 [Homo
sapiens]
(253 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|113415138 PREDICTED: similar to SVH protein isoform 2 [Homo s... 498 e-141
gi|169165133 PREDICTED: similar to SVH protein isoform 1 [Homo s... 498 e-141
gi|169165524 PREDICTED: similar to SVH protein isoform 2 [Homo s... 493 e-140
gi|169165931 PREDICTED: similar to SVH protein isoform 1 [Homo s... 481 e-136
gi|113414573 PREDICTED: similar to SVH protein isoform 2 [Homo s... 481 e-136
gi|238776797 SVH protein isoform e [Homo sapiens] 477 e-135
gi|169165522 PREDICTED: similar to SVH protein isoform 1 [Homo s... 477 e-135
gi|238776793 SVH protein isoform b [Homo sapiens] 464 e-131
gi|31377663 SVH protein isoform a [Homo sapiens] 446 e-126
gi|238776799 SVH protein isoform d [Homo sapiens] 436 e-123
gi|238776801 SVH protein isoform f [Homo sapiens] 423 e-119
gi|238776795 SVH protein isoform c [Homo sapiens] 419 e-117
gi|7706143 armadillo repeat containing, X-linked 1 [Homo sapiens] 162 3e-40
gi|29540566 armadillo repeat containing, X-linked 3 [Homo sapiens] 153 2e-37
gi|29540564 armadillo repeat containing, X-linked 3 [Homo sapiens] 153 2e-37
gi|7705274 armadillo repeat containing, X-linked 3 [Homo sapiens] 153 2e-37
gi|7662162 ALEX2 protein [Homo sapiens] 149 3e-36
gi|29540562 ALEX2 protein [Homo sapiens] 149 3e-36
gi|239757861 PREDICTED: similar to armadillo repeat containing, ... 119 3e-27
gi|41054846 armadillo repeat containing, X-linked 5 [Homo sapiens] 79 5e-15
gi|216547715 basic helix-loop-helix domain containing, class B, ... 58 9e-09
gi|216547682 basic helix-loop-helix domain containing, class B, ... 58 9e-09
gi|216547672 basic helix-loop-helix domain containing, class B, ... 58 9e-09
gi|216547663 basic helix-loop-helix domain containing, class B, ... 58 9e-09
gi|216547655 basic helix-loop-helix domain containing, class B, ... 58 9e-09
gi|216547646 basic helix-loop-helix domain containing, class B, ... 58 9e-09
gi|216547639 basic helix-loop-helix domain containing, class B, ... 58 9e-09
gi|39930463 basic helix-loop-helix domain containing, class B, 9... 58 9e-09
gi|34147335 armadillo repeat containing, X-linked 6 [Homo sapiens] 53 3e-07
gi|57546906 armadillo repeat containing, X-linked 6 [Homo sapiens] 53 3e-07
>gi|113415138 PREDICTED: similar to SVH protein isoform 2 [Homo
sapiens]
Length = 253
Score = 498 bits (1281), Expect = e-141
Identities = 253/253 (100%), Positives = 253/253 (100%)
Query: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSAEDLTDGSYDDVLNA 60
MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSAEDLTDGSYDDVLNA
Sbjct: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSAEDLTDGSYDDVLNA 60
Query: 61 EQLQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIK 120
EQLQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIK
Sbjct: 61 EQLQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIK 120
Query: 121 DKALNALNNLSVNVENQIKIKIYISQVCEDVFSGPLNSAVLLTGNGNTKVDSSFLSLYDS 180
DKALNALNNLSVNVENQIKIKIYISQVCEDVFSGPLNSAVLLTGNGNTKVDSSFLSLYDS
Sbjct: 121 DKALNALNNLSVNVENQIKIKIYISQVCEDVFSGPLNSAVLLTGNGNTKVDSSFLSLYDS 180
Query: 181 HVAKEILLRVLTLFQHIKNCLKIEGHLAVQPTFTEGSLFFLLHGEECAQKIRALVDHHDA 240
HVAKEILLRVLTLFQHIKNCLKIEGHLAVQPTFTEGSLFFLLHGEECAQKIRALVDHHDA
Sbjct: 181 HVAKEILLRVLTLFQHIKNCLKIEGHLAVQPTFTEGSLFFLLHGEECAQKIRALVDHHDA 240
Query: 241 EVKEKVVTIIPKI 253
EVKEKVVTIIPKI
Sbjct: 241 EVKEKVVTIIPKI 253
>gi|169165133 PREDICTED: similar to SVH protein isoform 1 [Homo
sapiens]
Length = 253
Score = 498 bits (1281), Expect = e-141
Identities = 253/253 (100%), Positives = 253/253 (100%)
Query: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSAEDLTDGSYDDVLNA 60
MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSAEDLTDGSYDDVLNA
Sbjct: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSAEDLTDGSYDDVLNA 60
Query: 61 EQLQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIK 120
EQLQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIK
Sbjct: 61 EQLQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIK 120
Query: 121 DKALNALNNLSVNVENQIKIKIYISQVCEDVFSGPLNSAVLLTGNGNTKVDSSFLSLYDS 180
DKALNALNNLSVNVENQIKIKIYISQVCEDVFSGPLNSAVLLTGNGNTKVDSSFLSLYDS
Sbjct: 121 DKALNALNNLSVNVENQIKIKIYISQVCEDVFSGPLNSAVLLTGNGNTKVDSSFLSLYDS 180
Query: 181 HVAKEILLRVLTLFQHIKNCLKIEGHLAVQPTFTEGSLFFLLHGEECAQKIRALVDHHDA 240
HVAKEILLRVLTLFQHIKNCLKIEGHLAVQPTFTEGSLFFLLHGEECAQKIRALVDHHDA
Sbjct: 181 HVAKEILLRVLTLFQHIKNCLKIEGHLAVQPTFTEGSLFFLLHGEECAQKIRALVDHHDA 240
Query: 241 EVKEKVVTIIPKI 253
EVKEKVVTIIPKI
Sbjct: 241 EVKEKVVTIIPKI 253
>gi|169165524 PREDICTED: similar to SVH protein isoform 2 [Homo
sapiens]
Length = 253
Score = 493 bits (1270), Expect = e-140
Identities = 251/253 (99%), Positives = 253/253 (100%)
Query: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSAEDLTDGSYDDVLNA 60
MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSAEDLTDGSYDDVLNA
Sbjct: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSAEDLTDGSYDDVLNA 60
Query: 61 EQLQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIK 120
EQLQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIK
Sbjct: 61 EQLQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIK 120
Query: 121 DKALNALNNLSVNVENQIKIKIYISQVCEDVFSGPLNSAVLLTGNGNTKVDSSFLSLYDS 180
+KALNALNNLSVNVENQIKIKIYISQVCEDVFSGPLNSAVLLTGNGNTKVDSSFLSLYDS
Sbjct: 121 EKALNALNNLSVNVENQIKIKIYISQVCEDVFSGPLNSAVLLTGNGNTKVDSSFLSLYDS 180
Query: 181 HVAKEILLRVLTLFQHIKNCLKIEGHLAVQPTFTEGSLFFLLHGEECAQKIRALVDHHDA 240
HVAKEILLRVLTLFQ+IKNCLKIEGHLAVQPTFTEGSLFFLLHGEECAQKIRALVDHHDA
Sbjct: 181 HVAKEILLRVLTLFQNIKNCLKIEGHLAVQPTFTEGSLFFLLHGEECAQKIRALVDHHDA 240
Query: 241 EVKEKVVTIIPKI 253
EVKEKVVTIIPKI
Sbjct: 241 EVKEKVVTIIPKI 253
>gi|169165931 PREDICTED: similar to SVH protein isoform 1 [Homo
sapiens]
Length = 284
Score = 481 bits (1239), Expect = e-136
Identities = 253/284 (89%), Positives = 253/284 (89%), Gaps = 31/284 (10%)
Query: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSAEDLTDGSYDDVLNA 60
MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSAEDLTDGSYDDVLNA
Sbjct: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSAEDLTDGSYDDVLNA 60
Query: 61 EQLQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIK 120
EQLQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIK
Sbjct: 61 EQLQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIK 120
Query: 121 DKALNALNNLSVNVENQIKIKIYISQVCEDVFSGPLNSA--------------------- 159
DKALNALNNLSVNVENQIKIKIYISQVCEDVFSGPLNSA
Sbjct: 121 DKALNALNNLSVNVENQIKIKIYISQVCEDVFSGPLNSAVQLAGLRLLTNMTVTNDHQHM 180
Query: 160 ----------VLLTGNGNTKVDSSFLSLYDSHVAKEILLRVLTLFQHIKNCLKIEGHLAV 209
VLLTGNGNTKVDSSFLSLYDSHVAKEILLRVLTLFQHIKNCLKIEGHLAV
Sbjct: 181 LHSYITDLFQVLLTGNGNTKVDSSFLSLYDSHVAKEILLRVLTLFQHIKNCLKIEGHLAV 240
Query: 210 QPTFTEGSLFFLLHGEECAQKIRALVDHHDAEVKEKVVTIIPKI 253
QPTFTEGSLFFLLHGEECAQKIRALVDHHDAEVKEKVVTIIPKI
Sbjct: 241 QPTFTEGSLFFLLHGEECAQKIRALVDHHDAEVKEKVVTIIPKI 284
>gi|113414573 PREDICTED: similar to SVH protein isoform 2 [Homo
sapiens]
Length = 284
Score = 481 bits (1239), Expect = e-136
Identities = 253/284 (89%), Positives = 253/284 (89%), Gaps = 31/284 (10%)
Query: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSAEDLTDGSYDDVLNA 60
MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSAEDLTDGSYDDVLNA
Sbjct: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSAEDLTDGSYDDVLNA 60
Query: 61 EQLQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIK 120
EQLQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIK
Sbjct: 61 EQLQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIK 120
Query: 121 DKALNALNNLSVNVENQIKIKIYISQVCEDVFSGPLNSA--------------------- 159
DKALNALNNLSVNVENQIKIKIYISQVCEDVFSGPLNSA
Sbjct: 121 DKALNALNNLSVNVENQIKIKIYISQVCEDVFSGPLNSAVQLAGLRLLTNMTVTNDHQHM 180
Query: 160 ----------VLLTGNGNTKVDSSFLSLYDSHVAKEILLRVLTLFQHIKNCLKIEGHLAV 209
VLLTGNGNTKVDSSFLSLYDSHVAKEILLRVLTLFQHIKNCLKIEGHLAV
Sbjct: 181 LHSYITDLFQVLLTGNGNTKVDSSFLSLYDSHVAKEILLRVLTLFQHIKNCLKIEGHLAV 240
Query: 210 QPTFTEGSLFFLLHGEECAQKIRALVDHHDAEVKEKVVTIIPKI 253
QPTFTEGSLFFLLHGEECAQKIRALVDHHDAEVKEKVVTIIPKI
Sbjct: 241 QPTFTEGSLFFLLHGEECAQKIRALVDHHDAEVKEKVVTIIPKI 284
>gi|238776797 SVH protein isoform e [Homo sapiens]
Length = 284
Score = 477 bits (1228), Expect = e-135
Identities = 251/284 (88%), Positives = 253/284 (89%), Gaps = 31/284 (10%)
Query: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSAEDLTDGSYDDVLNA 60
MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSAEDLTDGSYDDVLNA
Sbjct: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSAEDLTDGSYDDVLNA 60
Query: 61 EQLQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIK 120
EQLQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIK
Sbjct: 61 EQLQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIK 120
Query: 121 DKALNALNNLSVNVENQIKIKIYISQVCEDVFSGPLNSA--------------------- 159
+KALNALNNLSVNVENQIKIKIYISQVCEDVFSGPLNSA
Sbjct: 121 EKALNALNNLSVNVENQIKIKIYISQVCEDVFSGPLNSAVQLAGLTLLTNMTVTNDHQHM 180
Query: 160 ----------VLLTGNGNTKVDSSFLSLYDSHVAKEILLRVLTLFQHIKNCLKIEGHLAV 209
VLLTGNGNTKVDSSFLSLYDSHVAKEILLRVLTLFQ+IKNCLKIEGHLAV
Sbjct: 181 LHSYITDLFQVLLTGNGNTKVDSSFLSLYDSHVAKEILLRVLTLFQNIKNCLKIEGHLAV 240
Query: 210 QPTFTEGSLFFLLHGEECAQKIRALVDHHDAEVKEKVVTIIPKI 253
QPTFTEGSLFFLLHGEECAQKIRALVDHHDAEVKEKVVTIIPKI
Sbjct: 241 QPTFTEGSLFFLLHGEECAQKIRALVDHHDAEVKEKVVTIIPKI 284
>gi|169165522 PREDICTED: similar to SVH protein isoform 1 [Homo
sapiens]
Length = 284
Score = 477 bits (1228), Expect = e-135
Identities = 251/284 (88%), Positives = 253/284 (89%), Gaps = 31/284 (10%)
Query: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSAEDLTDGSYDDVLNA 60
MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSAEDLTDGSYDDVLNA
Sbjct: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSAEDLTDGSYDDVLNA 60
Query: 61 EQLQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIK 120
EQLQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIK
Sbjct: 61 EQLQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIK 120
Query: 121 DKALNALNNLSVNVENQIKIKIYISQVCEDVFSGPLNSA--------------------- 159
+KALNALNNLSVNVENQIKIKIYISQVCEDVFSGPLNSA
Sbjct: 121 EKALNALNNLSVNVENQIKIKIYISQVCEDVFSGPLNSAVQLAGLRLLTNMTVTNDHQHM 180
Query: 160 ----------VLLTGNGNTKVDSSFLSLYDSHVAKEILLRVLTLFQHIKNCLKIEGHLAV 209
VLLTGNGNTKVDSSFLSLYDSHVAKEILLRVLTLFQ+IKNCLKIEGHLAV
Sbjct: 181 LHSYITDLFQVLLTGNGNTKVDSSFLSLYDSHVAKEILLRVLTLFQNIKNCLKIEGHLAV 240
Query: 210 QPTFTEGSLFFLLHGEECAQKIRALVDHHDAEVKEKVVTIIPKI 253
QPTFTEGSLFFLLHGEECAQKIRALVDHHDAEVKEKVVTIIPKI
Sbjct: 241 QPTFTEGSLFFLLHGEECAQKIRALVDHHDAEVKEKVVTIIPKI 284
>gi|238776793 SVH protein isoform b [Homo sapiens]
Length = 308
Score = 464 bits (1193), Expect = e-131
Identities = 251/308 (81%), Positives = 253/308 (82%), Gaps = 55/308 (17%)
Query: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSAEDLTDGSYDDVLNA 60
MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSAEDLTDGSYDDVLNA
Sbjct: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSAEDLTDGSYDDVLNA 60
Query: 61 EQLQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIK 120
EQLQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIK
Sbjct: 61 EQLQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIK 120
Query: 121 DKALNALNNLSVNVENQIKIKIYISQVCEDVFSGPLNSA--------------------- 159
+KALNALNNLSVNVENQIKIKIYISQVCEDVFSGPLNSA
Sbjct: 121 EKALNALNNLSVNVENQIKIKIYISQVCEDVFSGPLNSAVQLAGLTLLTNMTVTNDHQHM 180
Query: 160 ----------VLLTGNGNTK------------------------VDSSFLSLYDSHVAKE 185
VLLTGNGNTK VDSSFLSLYDSHVAKE
Sbjct: 181 LHSYITDLFQVLLTGNGNTKVQVLKLLLNLSENPAMTEGLLRAQVDSSFLSLYDSHVAKE 240
Query: 186 ILLRVLTLFQHIKNCLKIEGHLAVQPTFTEGSLFFLLHGEECAQKIRALVDHHDAEVKEK 245
ILLRVLTLFQ+IKNCLKIEGHLAVQPTFTEGSLFFLLHGEECAQKIRALVDHHDAEVKEK
Sbjct: 241 ILLRVLTLFQNIKNCLKIEGHLAVQPTFTEGSLFFLLHGEECAQKIRALVDHHDAEVKEK 300
Query: 246 VVTIIPKI 253
VVTIIPKI
Sbjct: 301 VVTIIPKI 308
>gi|31377663 SVH protein isoform a [Homo sapiens]
Length = 343
Score = 446 bits (1147), Expect = e-126
Identities = 251/343 (73%), Positives = 253/343 (73%), Gaps = 90/343 (26%)
Query: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSA-------------- 46
MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSA
Sbjct: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSAGALEEGTSEGQLCG 60
Query: 47 ---------------------EDLTDGSYDDVLNAEQLQKLLYLLESTEDPVIIERALIT 85
EDLTDGSYDDVLNAEQLQKLLYLLESTEDPVIIERALIT
Sbjct: 61 RSARPQTGGTWESQWSKTSQPEDLTDGSYDDVLNAEQLQKLLYLLESTEDPVIIERALIT 120
Query: 86 LGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIKDKALNALNNLSVNVENQIKIKIYIS 145
LGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIK+KALNALNNLSVNVENQIKIKIYIS
Sbjct: 121 LGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIKEKALNALNNLSVNVENQIKIKIYIS 180
Query: 146 QVCEDVFSGPLNSA-------------------------------VLLTGNGNTK----- 169
QVCEDVFSGPLNSA VLLTGNGNTK
Sbjct: 181 QVCEDVFSGPLNSAVQLAGLTLLTNMTVTNDHQHMLHSYITDLFQVLLTGNGNTKVQVLK 240
Query: 170 -------------------VDSSFLSLYDSHVAKEILLRVLTLFQHIKNCLKIEGHLAVQ 210
VDSSFLSLYDSHVAKEILLRVLTLFQ+IKNCLKIEGHLAVQ
Sbjct: 241 LLLNLSENPAMTEGLLRAQVDSSFLSLYDSHVAKEILLRVLTLFQNIKNCLKIEGHLAVQ 300
Query: 211 PTFTEGSLFFLLHGEECAQKIRALVDHHDAEVKEKVVTIIPKI 253
PTFTEGSLFFLLHGEECAQKIRALVDHHDAEVKEKVVTIIPKI
Sbjct: 301 PTFTEGSLFFLLHGEECAQKIRALVDHHDAEVKEKVVTIIPKI 343
>gi|238776799 SVH protein isoform d [Homo sapiens]
Length = 249
Score = 436 bits (1122), Expect = e-123
Identities = 226/253 (89%), Positives = 236/253 (93%), Gaps = 4/253 (1%)
Query: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSAEDLTDGSYDDVLNA 60
MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSAEDLTDGSYDDVLNA
Sbjct: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSAEDLTDGSYDDVLNA 60
Query: 61 EQLQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIK 120
EQLQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIK
Sbjct: 61 EQLQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIK 120
Query: 121 DKALNALNNLSVNVENQIKIKIYISQVCEDVFSGPLNSAVLLTGNGNTKVDSSFLSLYDS 180
+KALNALNNLSVNVENQIKIK+ + ++ ++ P + LL +VDSSFLSLYDS
Sbjct: 121 EKALNALNNLSVNVENQIKIKVQVLKLLLNLSENPAMTEGLL----RAQVDSSFLSLYDS 176
Query: 181 HVAKEILLRVLTLFQHIKNCLKIEGHLAVQPTFTEGSLFFLLHGEECAQKIRALVDHHDA 240
HVAKEILLRVLTLFQ+IKNCLKIEGHLAVQPTFTEGSLFFLLHGEECAQKIRALVDHHDA
Sbjct: 177 HVAKEILLRVLTLFQNIKNCLKIEGHLAVQPTFTEGSLFFLLHGEECAQKIRALVDHHDA 236
Query: 241 EVKEKVVTIIPKI 253
EVKEKVVTIIPKI
Sbjct: 237 EVKEKVVTIIPKI 249
>gi|238776801 SVH protein isoform f [Homo sapiens]
Length = 225
Score = 423 bits (1087), Expect = e-119
Identities = 223/253 (88%), Positives = 225/253 (88%), Gaps = 28/253 (11%)
Query: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSAEDLTDGSYDDVLNA 60
MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSAEDLTDGSYDDVLNA
Sbjct: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSAEDLTDGSYDDVLNA 60
Query: 61 EQLQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIK 120
EQLQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIK
Sbjct: 61 EQLQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIK 120
Query: 121 DKALNALNNLSVNVENQIKIKIYISQVCEDVFSGPLNSAVLLTGNGNTKVDSSFLSLYDS 180
+KALNALNNLSVNVENQIKIK VDSSFLSLYDS
Sbjct: 121 EKALNALNNLSVNVENQIKIK----------------------------VDSSFLSLYDS 152
Query: 181 HVAKEILLRVLTLFQHIKNCLKIEGHLAVQPTFTEGSLFFLLHGEECAQKIRALVDHHDA 240
HVAKEILLRVLTLFQ+IKNCLKIEGHLAVQPTFTEGSLFFLLHGEECAQKIRALVDHHDA
Sbjct: 153 HVAKEILLRVLTLFQNIKNCLKIEGHLAVQPTFTEGSLFFLLHGEECAQKIRALVDHHDA 212
Query: 241 EVKEKVVTIIPKI 253
EVKEKVVTIIPKI
Sbjct: 213 EVKEKVVTIIPKI 225
>gi|238776795 SVH protein isoform c [Homo sapiens]
Length = 284
Score = 419 bits (1076), Expect = e-117
Identities = 226/288 (78%), Positives = 236/288 (81%), Gaps = 39/288 (13%)
Query: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSA-------------- 46
MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSA
Sbjct: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSAGALEEGTSEGQLCG 60
Query: 47 ---------------------EDLTDGSYDDVLNAEQLQKLLYLLESTEDPVIIERALIT 85
EDLTDGSYDDVLNAEQLQKLLYLLESTEDPVIIERALIT
Sbjct: 61 RSARPQTGGTWESQWSKTSQPEDLTDGSYDDVLNAEQLQKLLYLLESTEDPVIIERALIT 120
Query: 86 LGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIKDKALNALNNLSVNVENQIKIKIYIS 145
LGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIK+KALNALNNLSVNVENQIKIK+ +
Sbjct: 121 LGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIKEKALNALNNLSVNVENQIKIKVQVL 180
Query: 146 QVCEDVFSGPLNSAVLLTGNGNTKVDSSFLSLYDSHVAKEILLRVLTLFQHIKNCLKIEG 205
++ ++ P + LL +VDSSFLSLYDSHVAKEILLRVLTLFQ+IKNCLKIEG
Sbjct: 181 KLLLNLSENPAMTEGLL----RAQVDSSFLSLYDSHVAKEILLRVLTLFQNIKNCLKIEG 236
Query: 206 HLAVQPTFTEGSLFFLLHGEECAQKIRALVDHHDAEVKEKVVTIIPKI 253
HLAVQPTFTEGSLFFLLHGEECAQKIRALVDHHDAEVKEKVVTIIPKI
Sbjct: 237 HLAVQPTFTEGSLFFLLHGEECAQKIRALVDHHDAEVKEKVVTIIPKI 284
>gi|7706143 armadillo repeat containing, X-linked 1 [Homo sapiens]
Length = 453
Score = 162 bits (409), Expect = 3e-40
Identities = 104/255 (40%), Positives = 137/255 (53%), Gaps = 56/255 (21%)
Query: 55 DDVLNAEQLQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIRELGGIPIVANKINH 114
DD+L+A LQK+L +LE T DP I E AL+TLGNNAA+S NQ IRELGG+PI+A I
Sbjct: 199 DDILSAPDLQKVLNILERTNDPFIQEVALVTLGNNAAYSFNQNAIRELGGVPIIAKLIKT 258
Query: 115 SNQSIKDKALNALNNLSVNVENQIKIKIYISQVCEDVFSGPLNSAV-------------- 160
+ I++K NALNNLSVN ENQ KIK YISQVC+D L+SAV
Sbjct: 259 KDPIIREKTYNALNNLSVNAENQGKIKTYISQVCDDTMVCRLDSAVQMAGLRLLTNMTVT 318
Query: 161 -----------------LLTGNGNTK------------------------VDSSFLSLYD 179
L GN TK V S +SL++
Sbjct: 319 NHYQHLLSYSFPDFFALLFLGNHFTKIQIMKLIINFTENPAMTRELVSCKVPSELISLFN 378
Query: 180 SHVAKEILLRVLTLFQHIKNCLKIEGHLAVQPTFTEGSLFFLL-HGEECAQKIRALVDHH 238
+EILL +LTLF++I + +K EG + + F+ SLFFL C +KI+AL +H+
Sbjct: 379 KEWDREILLNILTLFENINDNIKNEGLASSRKEFSRSSLFFLFKESGVCVKKIKALANHN 438
Query: 239 DAEVKEKVVTIIPKI 253
D VK KV+ ++ K+
Sbjct: 439 DLVVKVKVLKVLTKL 453
Score = 49.7 bits (117), Expect = 2e-06
Identities = 25/59 (42%), Positives = 35/59 (59%), Gaps = 12/59 (20%)
Query: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDR------------ELGIRSSKSAE 47
MG R AG VAAG+++GAGACYC+YRL GR ++ E+G+ + K A+
Sbjct: 1 MGRTREAGCVAAGVVIGAGACYCVYRLAWGRDENEKIWDEDEESTDTSEIGVETVKGAK 59
>gi|29540566 armadillo repeat containing, X-linked 3 [Homo sapiens]
Length = 379
Score = 153 bits (386), Expect = 2e-37
Identities = 103/283 (36%), Positives = 148/283 (52%), Gaps = 58/283 (20%)
Query: 28 TRGRRRGDRELGIRSSKSAEDLTDGSYDD-VLNAEQLQKLLYLLESTEDPVIIERALITL 86
TR R R R R+ ++ + + DD VL+ ++LQK+L L+E +E P I+E ALI L
Sbjct: 88 TRARARA-RARATRARRAVQKRASPNSDDTVLSPQELQKVLCLVEMSEKPYILEAALIAL 146
Query: 87 GNNAAFSVNQAIIRELGGIPIVANKINHSNQSIKDKALNALNNLSVNVENQIKIKIYISQ 146
GNNAA++ N+ IIR+LGG+PIVA +N + +K+KAL LNNLSVN ENQ ++K+Y++Q
Sbjct: 147 GNNAAYAFNRDIIRDLGGLPIVAKILNTRDPIVKEKALIVLNNLSVNAENQRRLKVYMNQ 206
Query: 147 VCEDVFSGPLNSAVLL-------------------------------TGNGNTK------ 169
VC+D + LNS+V L GN TK
Sbjct: 207 VCDDTITSRLNSSVQLAGLRLLTNMTVTNEYQHMLANSISDFFRLFSAGNEETKLQVLKL 266
Query: 170 ------------------VDSSFLSLYDSHVAKEILLRVLTLFQHIKNCLKIEGHLAVQP 211
V SS SL++ KE++L++L +F++I + K E + Q
Sbjct: 267 LLNLAENPAMTRELLRAQVPSSLGSLFNKKENKEVILKLLVIFENINDNFKWEENEPTQN 326
Query: 212 TFTEGSLFFLL-HGEECAQKIRALVDHHDAEVKEKVVTIIPKI 253
F EGSLFF L + CA K+ + HHD VK KV + K+
Sbjct: 327 QFGEGSLFFFLKEFQVCADKVLGIESHHDFLVKVKVGKFMAKL 369
Score = 61.6 bits (148), Expect = 6e-10
Identities = 28/53 (52%), Positives = 35/53 (66%)
Query: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSAEDLTDGS 53
MG R GWV AGL++GAGACYCIYRLTRGR++ ++ S +D D S
Sbjct: 1 MGYARKVGWVTAGLVIGAGACYCIYRLTRGRKQNKEKMAEGGSGDVDDAGDCS 53
>gi|29540564 armadillo repeat containing, X-linked 3 [Homo sapiens]
Length = 379
Score = 153 bits (386), Expect = 2e-37
Identities = 103/283 (36%), Positives = 148/283 (52%), Gaps = 58/283 (20%)
Query: 28 TRGRRRGDRELGIRSSKSAEDLTDGSYDD-VLNAEQLQKLLYLLESTEDPVIIERALITL 86
TR R R R R+ ++ + + DD VL+ ++LQK+L L+E +E P I+E ALI L
Sbjct: 88 TRARARA-RARATRARRAVQKRASPNSDDTVLSPQELQKVLCLVEMSEKPYILEAALIAL 146
Query: 87 GNNAAFSVNQAIIRELGGIPIVANKINHSNQSIKDKALNALNNLSVNVENQIKIKIYISQ 146
GNNAA++ N+ IIR+LGG+PIVA +N + +K+KAL LNNLSVN ENQ ++K+Y++Q
Sbjct: 147 GNNAAYAFNRDIIRDLGGLPIVAKILNTRDPIVKEKALIVLNNLSVNAENQRRLKVYMNQ 206
Query: 147 VCEDVFSGPLNSAVLL-------------------------------TGNGNTK------ 169
VC+D + LNS+V L GN TK
Sbjct: 207 VCDDTITSRLNSSVQLAGLRLLTNMTVTNEYQHMLANSISDFFRLFSAGNEETKLQVLKL 266
Query: 170 ------------------VDSSFLSLYDSHVAKEILLRVLTLFQHIKNCLKIEGHLAVQP 211
V SS SL++ KE++L++L +F++I + K E + Q
Sbjct: 267 LLNLAENPAMTRELLRAQVPSSLGSLFNKKENKEVILKLLVIFENINDNFKWEENEPTQN 326
Query: 212 TFTEGSLFFLL-HGEECAQKIRALVDHHDAEVKEKVVTIIPKI 253
F EGSLFF L + CA K+ + HHD VK KV + K+
Sbjct: 327 QFGEGSLFFFLKEFQVCADKVLGIESHHDFLVKVKVGKFMAKL 369
Score = 61.6 bits (148), Expect = 6e-10
Identities = 28/53 (52%), Positives = 35/53 (66%)
Query: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSAEDLTDGS 53
MG R GWV AGL++GAGACYCIYRLTRGR++ ++ S +D D S
Sbjct: 1 MGYARKVGWVTAGLVIGAGACYCIYRLTRGRKQNKEKMAEGGSGDVDDAGDCS 53
>gi|7705274 armadillo repeat containing, X-linked 3 [Homo sapiens]
Length = 379
Score = 153 bits (386), Expect = 2e-37
Identities = 103/283 (36%), Positives = 148/283 (52%), Gaps = 58/283 (20%)
Query: 28 TRGRRRGDRELGIRSSKSAEDLTDGSYDD-VLNAEQLQKLLYLLESTEDPVIIERALITL 86
TR R R R R+ ++ + + DD VL+ ++LQK+L L+E +E P I+E ALI L
Sbjct: 88 TRARARA-RARATRARRAVQKRASPNSDDTVLSPQELQKVLCLVEMSEKPYILEAALIAL 146
Query: 87 GNNAAFSVNQAIIRELGGIPIVANKINHSNQSIKDKALNALNNLSVNVENQIKIKIYISQ 146
GNNAA++ N+ IIR+LGG+PIVA +N + +K+KAL LNNLSVN ENQ ++K+Y++Q
Sbjct: 147 GNNAAYAFNRDIIRDLGGLPIVAKILNTRDPIVKEKALIVLNNLSVNAENQRRLKVYMNQ 206
Query: 147 VCEDVFSGPLNSAVLL-------------------------------TGNGNTK------ 169
VC+D + LNS+V L GN TK
Sbjct: 207 VCDDTITSRLNSSVQLAGLRLLTNMTVTNEYQHMLANSISDFFRLFSAGNEETKLQVLKL 266
Query: 170 ------------------VDSSFLSLYDSHVAKEILLRVLTLFQHIKNCLKIEGHLAVQP 211
V SS SL++ KE++L++L +F++I + K E + Q
Sbjct: 267 LLNLAENPAMTRELLRAQVPSSLGSLFNKKENKEVILKLLVIFENINDNFKWEENEPTQN 326
Query: 212 TFTEGSLFFLL-HGEECAQKIRALVDHHDAEVKEKVVTIIPKI 253
F EGSLFF L + CA K+ + HHD VK KV + K+
Sbjct: 327 QFGEGSLFFFLKEFQVCADKVLGIESHHDFLVKVKVGKFMAKL 369
Score = 61.6 bits (148), Expect = 6e-10
Identities = 28/53 (52%), Positives = 35/53 (66%)
Query: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSAEDLTDGS 53
MG R GWV AGL++GAGACYCIYRLTRGR++ ++ S +D D S
Sbjct: 1 MGYARKVGWVTAGLVIGAGACYCIYRLTRGRKQNKEKMAEGGSGDVDDAGDCS 53
>gi|7662162 ALEX2 protein [Homo sapiens]
Length = 632
Score = 149 bits (375), Expect = 3e-36
Identities = 100/281 (35%), Positives = 149/281 (53%), Gaps = 63/281 (22%)
Query: 28 TRGRRRGDRELGIRSSKSAEDLTDGSYDDVLNAEQLQKLLYLLESTEDPVIIERALITLG 87
T+ R RG R + ++ ++ D++L L+K+L LL+ ++DP I + AL+TL
Sbjct: 358 TQRRGRGRRPVAMQKRPFPYEI-----DEILGVRDLRKVLALLQKSDDPFIQQVALLTLS 412
Query: 88 NNAAFSVNQAIIRELGGIPIVANKINHSNQSIKDKALNALNNLSVNVENQIKIKIYISQV 147
NNA +S NQ IR+LGG+PI+AN IN ++ IK+KAL A+NNLS N ENQ ++++Y+++V
Sbjct: 413 NNANYSCNQETIRKLGGLPIIANMINKTDPHIKEKALMAMNNLSENYENQGRLQVYMNKV 472
Query: 148 CEDVFSGPLNSAV-------------------------------LLTGNGNTKVD----- 171
+D+ + LNSAV L G G KV+
Sbjct: 473 MDDIMASNLNSAVQVVGLKFLTNMTITNDYQHLLVNSIANFFRLLSQGGGKIKVEILKIL 532
Query: 172 -------------------SSFLSLYDSHVAKEILLRVLTLFQHIKNCLKIEGHLAVQPT 212
+SF SLY+S+V EIL+ LTLF+ I + L+ E +
Sbjct: 533 SNFAENPDMLKKLLSTQVPASFSSLYNSYVESEILINALTLFEIIYDNLRAE--VFNYRE 590
Query: 213 FTEGSLFFL-LHGEECAQKIRALVDHHDAEVKEKVVTIIPK 252
F +GSLF+L C +KIRAL +HHD VK KV+ ++ K
Sbjct: 591 FNKGSLFYLCTTSGVCVKKIRALANHHDLLVKVKVIKLVNK 631
Score = 43.9 bits (102), Expect = 1e-04
Identities = 19/31 (61%), Positives = 24/31 (77%)
Query: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGR 31
M R AG VAAG+++GAGA YC+Y+ TRGR
Sbjct: 1 MSRVRDAGCVAAGIVIGAGAWYCVYKYTRGR 31
>gi|29540562 ALEX2 protein [Homo sapiens]
Length = 632
Score = 149 bits (375), Expect = 3e-36
Identities = 100/281 (35%), Positives = 149/281 (53%), Gaps = 63/281 (22%)
Query: 28 TRGRRRGDRELGIRSSKSAEDLTDGSYDDVLNAEQLQKLLYLLESTEDPVIIERALITLG 87
T+ R RG R + ++ ++ D++L L+K+L LL+ ++DP I + AL+TL
Sbjct: 358 TQRRGRGRRPVAMQKRPFPYEI-----DEILGVRDLRKVLALLQKSDDPFIQQVALLTLS 412
Query: 88 NNAAFSVNQAIIRELGGIPIVANKINHSNQSIKDKALNALNNLSVNVENQIKIKIYISQV 147
NNA +S NQ IR+LGG+PI+AN IN ++ IK+KAL A+NNLS N ENQ ++++Y+++V
Sbjct: 413 NNANYSCNQETIRKLGGLPIIANMINKTDPHIKEKALMAMNNLSENYENQGRLQVYMNKV 472
Query: 148 CEDVFSGPLNSAV-------------------------------LLTGNGNTKVD----- 171
+D+ + LNSAV L G G KV+
Sbjct: 473 MDDIMASNLNSAVQVVGLKFLTNMTITNDYQHLLVNSIANFFRLLSQGGGKIKVEILKIL 532
Query: 172 -------------------SSFLSLYDSHVAKEILLRVLTLFQHIKNCLKIEGHLAVQPT 212
+SF SLY+S+V EIL+ LTLF+ I + L+ E +
Sbjct: 533 SNFAENPDMLKKLLSTQVPASFSSLYNSYVESEILINALTLFEIIYDNLRAE--VFNYRE 590
Query: 213 FTEGSLFFL-LHGEECAQKIRALVDHHDAEVKEKVVTIIPK 252
F +GSLF+L C +KIRAL +HHD VK KV+ ++ K
Sbjct: 591 FNKGSLFYLCTTSGVCVKKIRALANHHDLLVKVKVIKLVNK 631
Score = 43.9 bits (102), Expect = 1e-04
Identities = 19/31 (61%), Positives = 24/31 (77%)
Query: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGR 31
M R AG VAAG+++GAGA YC+Y+ TRGR
Sbjct: 1 MSRVRDAGCVAAGIVIGAGAWYCVYKYTRGR 31
>gi|239757861 PREDICTED: similar to armadillo repeat containing,
X-linked 4 [Homo sapiens]
Length = 2382
Score = 119 bits (298), Expect = 3e-27
Identities = 79/253 (31%), Positives = 125/253 (49%), Gaps = 57/253 (22%)
Query: 58 LNAEQLQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIRELGGIPIVANKINHSNQ 117
++ L+KL+ ++E TEDP + E A L N+A +S + ++R +GGI ++ + +N+
Sbjct: 2130 MDPRDLEKLICMIEMTEDPSVHEIANNALYNSADYSYSHEVVRNVGGISVIESLLNNPYP 2189
Query: 118 SIKDKALNALNNLSVNVENQIKIKIYISQVCEDVFSGPLNSAV----------------- 160
S++ KALNALNN+SV EN K+K Y++QVCED + PLNS V
Sbjct: 2190 SVRQKALNALNNISVAAENHRKVKTYLNQVCEDTVTYPLNSNVQLAGLRLIRHLTITSEY 2249
Query: 161 --------------LLTGNGNTK------------------------VDSSFLSLYDSHV 182
L G+G TK +S ++++
Sbjct: 2250 QHMVTNYISEFLRLLTVGSGETKDHVLGMLLNFSKNPSMTKDLLIANAPTSLINIFSKKE 2309
Query: 183 AKEILLRVLTLFQHIKNCLKIEGHLAVQPTFTEGSLFFLL-HGEECAQKIRAL-VDHHDA 240
KE +L L+LF++I K Q F++ SL+FL + CA+K+RAL + +D
Sbjct: 2310 TKENILNALSLFENINYHFKRRAKAFTQDKFSKNSLYFLFQRPKACAKKLRALAAECNDP 2369
Query: 241 EVKEKVVTIIPKI 253
EVKE+V +I K+
Sbjct: 2370 EVKERVELLISKL 2382
Score = 43.9 bits (102), Expect = 1e-04
Identities = 20/43 (46%), Positives = 26/43 (60%)
Query: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSS 43
MG + GWV AGL++ AG CY IY+ T+GR + R L S
Sbjct: 93 MGRIQEVGWVTAGLVIWAGTCYYIYKFTKGRAQSVRTLARNGS 135
>gi|41054846 armadillo repeat containing, X-linked 5 [Homo sapiens]
Length = 558
Score = 78.6 bits (192), Expect = 5e-15
Identities = 62/252 (24%), Positives = 113/252 (44%), Gaps = 56/252 (22%)
Query: 58 LNAEQLQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIRELGGIPIVANKINHSNQ 117
L ++ KL+ LL+ T+DP I E A + +G + A+ Q II ++G ++ N +N+ N
Sbjct: 307 LEPKEFDKLVALLKLTKDPFIHEIATMIMGISPAYPFTQDIIHDVGITVMIENLVNNPNV 366
Query: 118 SIKDKALNALNNLSVNVENQIKIKIYISQVCEDVFSGPLNSAVLLTG------------- 164
AL+ +++ S + E + YI QVC+ + S PLNS V L G
Sbjct: 367 KEHPGALSMVDDSSESSEEPKSGESYIHQVCKGIISCPLNSPVQLAGLKLLGHLSIKFED 426
Query: 165 ------------------------------------NGNTK------VDSSFLSLYDSHV 182
+ NT+ V SS ++ ++ +
Sbjct: 427 HYVITSYIPDFLTLLNKGSVKTKFYVLKVFSCLSKNHANTRELISAKVLSSLVAPFNKNE 486
Query: 183 AKEILLRVLTLFQHIKNCLKIEGHLAVQPTFTEGSLFFLL-HGEECAQKIRALVDHHDAE 241
+K +L ++ +F++I K + L + FT+ L + ++ QK++ L +H D E
Sbjct: 487 SKANILNIIEIFENINFQFKTKAKLFTKEKFTKSELISIFQEAKQFGQKLQDLAEHSDPE 546
Query: 242 VKEKVVTIIPKI 253
V++KV+ +I K+
Sbjct: 547 VRDKVIRLILKL 558
>gi|216547715 basic helix-loop-helix domain containing, class B, 9
[Homo sapiens]
Length = 547
Score = 57.8 bits (138), Expect = 9e-09
Identities = 31/101 (30%), Positives = 61/101 (60%), Gaps = 1/101 (0%)
Query: 58 LNAEQLQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIRELGGIPIVANKINHSNQ 117
+++E+ +KL+ LL+ST DP+I + A I +G + Q I E+G + ++ + ++ +
Sbjct: 320 MDSEEFEKLVSLLKSTTDPLIHKIARIAMGVHNVHPFAQEFINEVGVVTLIESLLSFPSP 379
Query: 118 SIKDKALNALNNLSVNVENQIKIKIYISQVCEDVFSGPLNS 158
++ K + LN S + E Q KI++++ +C++ S PLNS
Sbjct: 380 EMRKKTVITLNPPSGD-ERQRKIELHVKHMCKETMSFPLNS 419
>gi|216547682 basic helix-loop-helix domain containing, class B, 9
[Homo sapiens]
Length = 547
Score = 57.8 bits (138), Expect = 9e-09
Identities = 31/101 (30%), Positives = 61/101 (60%), Gaps = 1/101 (0%)
Query: 58 LNAEQLQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIRELGGIPIVANKINHSNQ 117
+++E+ +KL+ LL+ST DP+I + A I +G + Q I E+G + ++ + ++ +
Sbjct: 320 MDSEEFEKLVSLLKSTTDPLIHKIARIAMGVHNVHPFAQEFINEVGVVTLIESLLSFPSP 379
Query: 118 SIKDKALNALNNLSVNVENQIKIKIYISQVCEDVFSGPLNS 158
++ K + LN S + E Q KI++++ +C++ S PLNS
Sbjct: 380 EMRKKTVITLNPPSGD-ERQRKIELHVKHMCKETMSFPLNS 419
>gi|216547672 basic helix-loop-helix domain containing, class B, 9
[Homo sapiens]
Length = 547
Score = 57.8 bits (138), Expect = 9e-09
Identities = 31/101 (30%), Positives = 61/101 (60%), Gaps = 1/101 (0%)
Query: 58 LNAEQLQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIRELGGIPIVANKINHSNQ 117
+++E+ +KL+ LL+ST DP+I + A I +G + Q I E+G + ++ + ++ +
Sbjct: 320 MDSEEFEKLVSLLKSTTDPLIHKIARIAMGVHNVHPFAQEFINEVGVVTLIESLLSFPSP 379
Query: 118 SIKDKALNALNNLSVNVENQIKIKIYISQVCEDVFSGPLNS 158
++ K + LN S + E Q KI++++ +C++ S PLNS
Sbjct: 380 EMRKKTVITLNPPSGD-ERQRKIELHVKHMCKETMSFPLNS 419
>gi|216547663 basic helix-loop-helix domain containing, class B, 9
[Homo sapiens]
Length = 547
Score = 57.8 bits (138), Expect = 9e-09
Identities = 31/101 (30%), Positives = 61/101 (60%), Gaps = 1/101 (0%)
Query: 58 LNAEQLQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIRELGGIPIVANKINHSNQ 117
+++E+ +KL+ LL+ST DP+I + A I +G + Q I E+G + ++ + ++ +
Sbjct: 320 MDSEEFEKLVSLLKSTTDPLIHKIARIAMGVHNVHPFAQEFINEVGVVTLIESLLSFPSP 379
Query: 118 SIKDKALNALNNLSVNVENQIKIKIYISQVCEDVFSGPLNS 158
++ K + LN S + E Q KI++++ +C++ S PLNS
Sbjct: 380 EMRKKTVITLNPPSGD-ERQRKIELHVKHMCKETMSFPLNS 419
>gi|216547655 basic helix-loop-helix domain containing, class B, 9
[Homo sapiens]
Length = 547
Score = 57.8 bits (138), Expect = 9e-09
Identities = 31/101 (30%), Positives = 61/101 (60%), Gaps = 1/101 (0%)
Query: 58 LNAEQLQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIRELGGIPIVANKINHSNQ 117
+++E+ +KL+ LL+ST DP+I + A I +G + Q I E+G + ++ + ++ +
Sbjct: 320 MDSEEFEKLVSLLKSTTDPLIHKIARIAMGVHNVHPFAQEFINEVGVVTLIESLLSFPSP 379
Query: 118 SIKDKALNALNNLSVNVENQIKIKIYISQVCEDVFSGPLNS 158
++ K + LN S + E Q KI++++ +C++ S PLNS
Sbjct: 380 EMRKKTVITLNPPSGD-ERQRKIELHVKHMCKETMSFPLNS 419
>gi|216547646 basic helix-loop-helix domain containing, class B, 9
[Homo sapiens]
Length = 547
Score = 57.8 bits (138), Expect = 9e-09
Identities = 31/101 (30%), Positives = 61/101 (60%), Gaps = 1/101 (0%)
Query: 58 LNAEQLQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIRELGGIPIVANKINHSNQ 117
+++E+ +KL+ LL+ST DP+I + A I +G + Q I E+G + ++ + ++ +
Sbjct: 320 MDSEEFEKLVSLLKSTTDPLIHKIARIAMGVHNVHPFAQEFINEVGVVTLIESLLSFPSP 379
Query: 118 SIKDKALNALNNLSVNVENQIKIKIYISQVCEDVFSGPLNS 158
++ K + LN S + E Q KI++++ +C++ S PLNS
Sbjct: 380 EMRKKTVITLNPPSGD-ERQRKIELHVKHMCKETMSFPLNS 419
>gi|216547639 basic helix-loop-helix domain containing, class B, 9
[Homo sapiens]
Length = 547
Score = 57.8 bits (138), Expect = 9e-09
Identities = 31/101 (30%), Positives = 61/101 (60%), Gaps = 1/101 (0%)
Query: 58 LNAEQLQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIRELGGIPIVANKINHSNQ 117
+++E+ +KL+ LL+ST DP+I + A I +G + Q I E+G + ++ + ++ +
Sbjct: 320 MDSEEFEKLVSLLKSTTDPLIHKIARIAMGVHNVHPFAQEFINEVGVVTLIESLLSFPSP 379
Query: 118 SIKDKALNALNNLSVNVENQIKIKIYISQVCEDVFSGPLNS 158
++ K + LN S + E Q KI++++ +C++ S PLNS
Sbjct: 380 EMRKKTVITLNPPSGD-ERQRKIELHVKHMCKETMSFPLNS 419
>gi|39930463 basic helix-loop-helix domain containing, class B, 9
[Homo sapiens]
Length = 547
Score = 57.8 bits (138), Expect = 9e-09
Identities = 31/101 (30%), Positives = 61/101 (60%), Gaps = 1/101 (0%)
Query: 58 LNAEQLQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIRELGGIPIVANKINHSNQ 117
+++E+ +KL+ LL+ST DP+I + A I +G + Q I E+G + ++ + ++ +
Sbjct: 320 MDSEEFEKLVSLLKSTTDPLIHKIARIAMGVHNVHPFAQEFINEVGVVTLIESLLSFPSP 379
Query: 118 SIKDKALNALNNLSVNVENQIKIKIYISQVCEDVFSGPLNS 158
++ K + LN S + E Q KI++++ +C++ S PLNS
Sbjct: 380 EMRKKTVITLNPPSGD-ERQRKIELHVKHMCKETMSFPLNS 419
>gi|34147335 armadillo repeat containing, X-linked 6 [Homo
sapiens]
Length = 300
Score = 52.8 bits (125), Expect = 3e-07
Identities = 21/31 (67%), Positives = 26/31 (83%)
Query: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGR 31
MG R GW+AAGL++GAGACYC+Y+LT GR
Sbjct: 1 MGRAREVGWMAAGLMIGAGACYCVYKLTIGR 31
Score = 38.9 bits (89), Expect = 0.004
Identities = 23/76 (30%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
Query: 89 NAAFSVNQAIIRELGGIPIVANKINHSNQSIKDKALNALNNLSVNVENQIKIKIYISQVC 148
+A F +Q I L + + N + ++++ AL A +NL+ ++E+Q +IK+YI++VC
Sbjct: 144 DAGFPFSQDINSHLASLSMARNTSPTPDPTVRE-ALCAPDNLNASIESQGQIKMYINEVC 202
Query: 149 EDVFSGPLNSAVLLTG 164
+ S NS + G
Sbjct: 203 RETVSRCCNSFLQQAG 218
>gi|57546906 armadillo repeat containing, X-linked 6 [Homo
sapiens]
Length = 300
Score = 52.8 bits (125), Expect = 3e-07
Identities = 21/31 (67%), Positives = 26/31 (83%)
Query: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGR 31
MG R GW+AAGL++GAGACYC+Y+LT GR
Sbjct: 1 MGRAREVGWMAAGLMIGAGACYCVYKLTIGR 31
Score = 38.9 bits (89), Expect = 0.004
Identities = 23/76 (30%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
Query: 89 NAAFSVNQAIIRELGGIPIVANKINHSNQSIKDKALNALNNLSVNVENQIKIKIYISQVC 148
+A F +Q I L + + N + ++++ AL A +NL+ ++E+Q +IK+YI++VC
Sbjct: 144 DAGFPFSQDINSHLASLSMARNTSPTPDPTVRE-ALCAPDNLNASIESQGQIKMYINEVC 202
Query: 149 EDVFSGPLNSAVLLTG 164
+ S NS + G
Sbjct: 203 RETVSRCCNSFLQQAG 218
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.137 0.389
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,568,076
Number of Sequences: 37866
Number of extensions: 335860
Number of successful extensions: 994
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 55
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 879
Number of HSP's gapped (non-prelim): 101
length of query: 253
length of database: 18,247,518
effective HSP length: 100
effective length of query: 153
effective length of database: 14,460,918
effective search space: 2212520454
effective search space used: 2212520454
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.