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Search of human proteins with 194018499
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|194018499 C-type lectin domain family 12, member B isoform 2
[Homo sapiens]
(232 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|194018499 C-type lectin domain family 12, member B isoform 2 ... 481 e-136
gi|194018501 C-type lectin domain family 12, member B isoform 1 ... 471 e-133
gi|94557290 myeloid inhibitory C-type lectin-like receptor isofo... 139 3e-33
gi|37577103 C-type lectin-like receptor-1 [Homo sapiens] 136 2e-32
gi|4505501 oxidized low density lipoprotein (lectin-like) recept... 95 4e-20
gi|94557293 myeloid inhibitory C-type lectin-like receptor isofo... 92 3e-19
gi|153252029 C-type lectin domain family 1, member B isoform a [... 87 9e-18
gi|169234653 NKG2-D type II integral membrane protein [Homo sapi... 86 3e-17
gi|46409326 C-type lectin domain family 9, member A [Homo sapiens] 86 4e-17
gi|153252048 C-type lectin domain family 1, member B isoform b [... 81 9e-16
gi|37675373 dendritic cell-associated C-type lectin 1 isoform a ... 80 1e-15
gi|223029386 CD209 molecule isoform 3 [Homo sapiens] 74 8e-14
gi|223029382 CD209 molecule isoform 6 [Homo sapiens] 74 8e-14
gi|10863957 CD209 molecule isoform 1 [Homo sapiens] 74 8e-14
gi|167614498 killer cell lectin-like receptor subfamily D, membe... 74 1e-13
gi|7669499 killer cell lectin-like receptor subfamily D, member ... 74 1e-13
gi|4504889 killer cell lectin-like receptor subfamily D, member ... 74 1e-13
gi|223029384 CD209 molecule isoform 7 [Homo sapiens] 72 4e-13
gi|223029517 CD209 molecule isoform 8 [Homo sapiens] 71 9e-13
gi|223278347 C-type lectin domain family 4, member M isoform 9 [... 71 9e-13
gi|223278337 C-type lectin domain family 4, member M isoform 12 ... 71 9e-13
gi|223278335 C-type lectin domain family 4, member M isoform 2 [... 71 9e-13
gi|223278350 C-type lectin domain family 4, member M isoform 8 [... 71 9e-13
gi|42542390 C-type lectin domain family 4, member M isoform 1 [H... 71 9e-13
gi|223278339 C-type lectin domain family 4, member M isoform 7 [... 70 1e-12
gi|223029380 CD209 molecule isoform 5 [Homo sapiens] 70 1e-12
gi|20149533 Fc fragment of IgE, low affinity II, receptor for (C... 70 1e-12
gi|4502251 asialoglycoprotein receptor 1 [Homo sapiens] 69 3e-12
gi|223278342 C-type lectin domain family 4, member M isoform 11 ... 69 3e-12
gi|18426875 asialoglycoprotein receptor 2 isoform b [Homo sapiens] 69 3e-12
>gi|194018499 C-type lectin domain family 12, member B isoform 2
[Homo sapiens]
Length = 232
Score = 481 bits (1237), Expect = e-136
Identities = 232/232 (100%), Positives = 232/232 (100%)
Query: 1 MSEEVTYATLTFQDSAGARNNRDGNNLRKRGHPAPSPIWRHAALGLVTLCLMLLIGLVTL 60
MSEEVTYATLTFQDSAGARNNRDGNNLRKRGHPAPSPIWRHAALGLVTLCLMLLIGLVTL
Sbjct: 1 MSEEVTYATLTFQDSAGARNNRDGNNLRKRGHPAPSPIWRHAALGLVTLCLMLLIGLVTL 60
Query: 61 GMMFLQISNDINSDSEKLSQLQKTIQQQQDNLSQQLGNSNNLSMEEEFLKSQISSVLKRQ 120
GMMFLQISNDINSDSEKLSQLQKTIQQQQDNLSQQLGNSNNLSMEEEFLKSQISSVLKRQ
Sbjct: 61 GMMFLQISNDINSDSEKLSQLQKTIQQQQDNLSQQLGNSNNLSMEEEFLKSQISSVLKRQ 120
Query: 121 EQMAIKLCQELIIHTSDHRCNPCPKMWQWYQNSCYYFTTNEEKTWANSRKDCIDKNSTLV 180
EQMAIKLCQELIIHTSDHRCNPCPKMWQWYQNSCYYFTTNEEKTWANSRKDCIDKNSTLV
Sbjct: 121 EQMAIKLCQELIIHTSDHRCNPCPKMWQWYQNSCYYFTTNEEKTWANSRKDCIDKNSTLV 180
Query: 181 KIDSLEEKDFLMSQPLLMFSFFWLGLSWDSSGRSWFWEDGSVPSPSLYVSNY 232
KIDSLEEKDFLMSQPLLMFSFFWLGLSWDSSGRSWFWEDGSVPSPSLYVSNY
Sbjct: 181 KIDSLEEKDFLMSQPLLMFSFFWLGLSWDSSGRSWFWEDGSVPSPSLYVSNY 232
>gi|194018501 C-type lectin domain family 12, member B isoform 1
[Homo sapiens]
Length = 276
Score = 471 bits (1212), Expect = e-133
Identities = 227/228 (99%), Positives = 228/228 (100%)
Query: 1 MSEEVTYATLTFQDSAGARNNRDGNNLRKRGHPAPSPIWRHAALGLVTLCLMLLIGLVTL 60
MSEEVTYATLTFQDSAGARNNRDGNNLRKRGHPAPSPIWRHAALGLVTLCLMLLIGLVTL
Sbjct: 1 MSEEVTYATLTFQDSAGARNNRDGNNLRKRGHPAPSPIWRHAALGLVTLCLMLLIGLVTL 60
Query: 61 GMMFLQISNDINSDSEKLSQLQKTIQQQQDNLSQQLGNSNNLSMEEEFLKSQISSVLKRQ 120
GMMFLQISNDINSDSEKLSQLQKTIQQQQDNLSQQLGNSNNLSMEEEFLKSQISSVLKRQ
Sbjct: 61 GMMFLQISNDINSDSEKLSQLQKTIQQQQDNLSQQLGNSNNLSMEEEFLKSQISSVLKRQ 120
Query: 121 EQMAIKLCQELIIHTSDHRCNPCPKMWQWYQNSCYYFTTNEEKTWANSRKDCIDKNSTLV 180
EQMAIKLCQELIIHTSDHRCNPCPKMWQWYQNSCYYFTTNEEKTWANSRKDCIDKNSTLV
Sbjct: 121 EQMAIKLCQELIIHTSDHRCNPCPKMWQWYQNSCYYFTTNEEKTWANSRKDCIDKNSTLV 180
Query: 181 KIDSLEEKDFLMSQPLLMFSFFWLGLSWDSSGRSWFWEDGSVPSPSLY 228
KIDSLEEKDFLMSQPLLMFSFFWLGLSWDSSGRSWFWEDGSVPSPSL+
Sbjct: 181 KIDSLEEKDFLMSQPLLMFSFFWLGLSWDSSGRSWFWEDGSVPSPSLF 228
>gi|94557290 myeloid inhibitory C-type lectin-like receptor isoform
alpha [Homo sapiens]
Length = 265
Score = 139 bits (349), Expect = 3e-33
Identities = 80/231 (34%), Positives = 130/231 (56%), Gaps = 13/231 (5%)
Query: 1 MSEEVTYATLTFQDSAGARNNRDGNNLRKRGHPAPSPIWRHAALGLVTLCLMLLIGLVTL 60
MSEEVTYA L FQ+S+ + ++ PAPS +WR AAL L LCL+LLIGL L
Sbjct: 1 MSEEVTYADLQFQNSSEMEKIPEIGKFGEKAPPAPSHVWRPAALFLTLLCLLLLIGLGVL 60
Query: 61 GMMFLQISNDINSDSEKLSQLQKTIQQQQDNLSQQLGNSNNLSMEEEFLKSQISSVLKRQ 120
MF + + +K+++LQ ++ Q N+S QL ++ N+S ++I ++
Sbjct: 61 ASMF---HVTLKIEMKKMNKLQNISEELQRNISLQLMSNMNIS-------NKIRNLSTTL 110
Query: 121 EQMAIKLCQELIIHTSDHRCNPCPKMWQWYQNSCYYFTTNEEKTWANSRKDCIDKNSTLV 180
+ +A KLC+EL +H+C PCP+ W W+++SC YF +++ +TW S+ C +N++L+
Sbjct: 111 QTIATKLCRELYSKEQEHKCKPCPRRWIWHKDSC-YFLSDDVQTWQESKMACAAQNASLL 169
Query: 181 KIDSLEEKDFLMSQPLLMFSFFWLGLSWDSSGRSWFWEDGSVPSPSLYVSN 231
KI++ +F+ SQ +WLGLS + D + S + + N
Sbjct: 170 KINNKNALEFIKSQS--RSYDYWLGLSPEEDSTRGMRVDNIINSSAWVIRN 218
>gi|37577103 C-type lectin-like receptor-1 [Homo sapiens]
Length = 280
Score = 136 bits (342), Expect = 2e-32
Identities = 78/224 (34%), Positives = 123/224 (54%), Gaps = 20/224 (8%)
Query: 6 TYATLTFQDSAGARNNRDGNNLRKRGHPAPSPIWRHAALGLVTLCLMLLIGLVTLGMMFL 65
T +L Q SA R+ R+ H APS WR AL L+TLCL+LLIGL LG++F
Sbjct: 18 TTMSLHSQGSATTRHPEP----RRTEHRAPSSTWRPVALTLLTLCLVLLIGLAALGLLFF 73
Query: 66 QISNDINSDSEKLSQLQKTIQQQQDNLSQQLGNSNNLSMEEEFLKSQISSVLKRQEQMAI 125
Q N+ + +SQ++ ++LGN+ S E + L+ Q + + +A
Sbjct: 74 QYYQLSNTGQDTISQME-----------ERLGNT---SQELQSLQVQNIKLAGSLQHVAE 119
Query: 126 KLCQELIIHTSDHRCNPCPKMWQWYQNSCYYFTTNEEKTWANSRKDCIDKNSTLVKIDSL 185
KLC+EL HRC+PC + W+W+ ++CY F + K+W + + C+ +NST++KI+
Sbjct: 120 KLCRELYNKAGAHRCSPCTEQWKWHGDNCYQF-YKDSKSWEDCKYFCLSENSTMLKINKQ 178
Query: 186 EEKDFLMSQPLLMFSF-FWLGLSWDSSGRSWFWEDGSVPSPSLY 228
E+ +F SQ F + +W GL SG++W W DG+ + L+
Sbjct: 179 EDLEFAASQSYSEFFYSYWTGLLRPDSGKAWLWMDGTPFTSELF 222
>gi|4505501 oxidized low density lipoprotein (lectin-like) receptor
1 [Homo sapiens]
Length = 273
Score = 95.1 bits (235), Expect = 4e-20
Identities = 64/203 (31%), Positives = 103/203 (50%), Gaps = 16/203 (7%)
Query: 36 SPIWRHAALGLVTLCLMLLIGLVTLGMMFLQISNDINSDSEKLSQLQKTIQ------QQQ 89
SP W AA L LCL L++ ++ LGM Q+S+ + + L+ +K ++ QQ
Sbjct: 32 SPWWCLAAATLGVLCLGLVVTIMVLGMQLSQVSDLLTQEQANLTHQKKKLEGQISARQQA 91
Query: 90 DNLSQQLGNSNNLSMEEEFLKSQISSVLKRQEQMAIKLCQELIIHTSDHRCN---PCPKM 146
+ SQ+ + N L E L +++ K +EQM + + T N PCP+
Sbjct: 92 EEASQE--SENELKEMIETLARKLNE--KSKEQMELHHQNLNLQETLKRVANCSAPCPQD 147
Query: 147 WQWYQNSCYYFTTNEEKTWANSRKDCIDKNSTLVKIDSLEEKDFLMSQPLLMFSF-FWLG 205
W W+ +CY F++ W S++ C+ ++ L+KI+S + DF+ Q + SF FW+G
Sbjct: 148 WIWHGENCYLFSSG-SFNWEKSQEKCLSLDAKLLKINSTADLDFI-QQAISYSSFPFWMG 205
Query: 206 LSWDSSGRSWFWEDGSVPSPSLY 228
LS + W WEDGS P L+
Sbjct: 206 LSRRNPSYPWLWEDGSPLMPHLF 228
>gi|94557293 myeloid inhibitory C-type lectin-like receptor isoform
beta [Homo sapiens]
Length = 232
Score = 92.4 bits (228), Expect = 3e-19
Identities = 63/231 (27%), Positives = 110/231 (47%), Gaps = 46/231 (19%)
Query: 1 MSEEVTYATLTFQDSAGARNNRDGNNLRKRGHPAPSPIWRHAALGLVTLCLMLLIGLVTL 60
MSEEVTYA L FQ+S+ + ++ H VTL
Sbjct: 1 MSEEVTYADLQFQNSSEMEKIPEIGKFGEKVH-------------------------VTL 35
Query: 61 GMMFLQISNDINSDSEKLSQLQKTIQQQQDNLSQQLGNSNNLSMEEEFLKSQISSVLKRQ 120
+ + +K+++LQ ++ Q N+S QL ++ N+S + L + + ++
Sbjct: 36 KI-----------EMKKMNKLQNISEELQRNISLQLMSNMNISNKIRNLSTTLQTI---- 80
Query: 121 EQMAIKLCQELIIHTSDHRCNPCPKMWQWYQNSCYYFTTNEEKTWANSRKDCIDKNSTLV 180
A KLC+EL +H+C PCP+ W W+++SC YF +++ +TW S+ C +N++L+
Sbjct: 81 ---ATKLCRELYSKEQEHKCKPCPRRWIWHKDSC-YFLSDDVQTWQESKMACAAQNASLL 136
Query: 181 KIDSLEEKDFLMSQPLLMFSFFWLGLSWDSSGRSWFWEDGSVPSPSLYVSN 231
KI++ +F+ SQ +WLGLS + D + S + + N
Sbjct: 137 KINNKNALEFIKSQS--RSYDYWLGLSPEEDSTRGMRVDNIINSSAWVIRN 185
>gi|153252029 C-type lectin domain family 1, member B isoform a
[Homo sapiens]
Length = 229
Score = 87.4 bits (215), Expect = 9e-18
Identities = 57/195 (29%), Positives = 93/195 (47%), Gaps = 36/195 (18%)
Query: 34 APSPIWRHAALGLVTLCLMLLIGLVTLGMMFLQISNDINSDSEKLSQLQKTIQQQQDNLS 93
A S WR AL L+ LC+ +++GLV LG+ + N + ++E + T+QQ
Sbjct: 25 ASSSWWRVMALILLILCVGMVVGLVALGIWSVMQRNYLQGENENRTG---TLQQLAKRFC 81
Query: 94 QQLGNSNNLSMEEEFLKSQISSVLKRQEQMAIKLCQELIIHTSDHRCNPCPKMWQWYQNS 153
Q + +S++ K H+C+PC W++Y +S
Sbjct: 82 QYVVK-----------QSELKGTFK------------------GHKCSPCDTNWRYYGDS 112
Query: 154 CYYFTTNEEKTWANSRKDCIDKNSTLVKIDSLEEKDFLMSQPLLMFSFFWLGLSWDSSGR 213
CY F TW S++ C D N+TL+KID+ +++ ++ L+ W+GLS S
Sbjct: 113 CYGF-FRHNLTWEESKQYCTDMNATLLKIDNRNIVEYIKARTHLI---RWVGLSRQKSNE 168
Query: 214 SWFWEDGSVPSPSLY 228
W WEDGSV S +++
Sbjct: 169 VWKWEDGSVISENMF 183
>gi|169234653 NKG2-D type II integral membrane protein [Homo
sapiens]
Length = 216
Score = 85.9 bits (211), Expect = 3e-17
Identities = 41/99 (41%), Positives = 62/99 (62%), Gaps = 5/99 (5%)
Query: 129 QELIIHTSDHRCNPCPKMWQWYQNSCYYFTTNEEKTWANSRKDCIDKNSTLVKIDSLEEK 188
QE+ I ++ C PCPK W Y+N+CY F +E K W S+ C+ +N++L+K+ S E++
Sbjct: 85 QEVQIPLTESYCGPCPKNWICYKNNCYQF-FDESKNWYESQASCMSQNASLLKVYSKEDQ 143
Query: 189 DFLMSQPLLMFSFFWLGLSWDSSGRSWFWEDGSVPSPSL 227
D L L+ S+ W+GL + SW WEDGS+ SP+L
Sbjct: 144 DLLK----LVKSYHWMGLVHIPTNGSWQWEDGSILSPNL 178
>gi|46409326 C-type lectin domain family 9, member A [Homo sapiens]
Length = 241
Score = 85.5 bits (210), Expect = 4e-17
Identities = 57/182 (31%), Positives = 87/182 (47%), Gaps = 31/182 (17%)
Query: 50 CLMLLIGLVTLGMMFLQISNDINSDSEKLSQLQKTIQQQQDNLSQQLGNSNNLSMEEEFL 109
C+ LL + LG+ LQ+S EKL Q ++ + L+ E
Sbjct: 44 CMGLLTASIFLGVKLLQVSTIAMQQQEKLIQQERAL----------------LNFTE--- 84
Query: 110 KSQISSVLKRQEQMAIKLCQELIIHT--SDHRCNPCPKMWQWYQNSCYYFTTNEEKTWAN 167
KR + +K CQ + ++ S H +PCP W + SCYY + W
Sbjct: 85 -------WKRSCALQMKYCQAFMQNSLSSAHNSSPCPNNWIQNRESCYY-VSEIWSIWHT 136
Query: 168 SRKDCIDKNSTLVKIDSLEEKDFLM-SQPLLMFSF-FWLGLSWDSSGRSWFWEDGSVPSP 225
S+++C+ + STL++I+S EE DF+ S + S+ +W+GLS D W W+DGS PSP
Sbjct: 137 SQENCLKEGSTLLQIESKEEMDFITGSLRKIKGSYDYWVGLSQDGHSGRWLWQDGSSPSP 196
Query: 226 SL 227
L
Sbjct: 197 GL 198
>gi|153252048 C-type lectin domain family 1, member B isoform b
[Homo sapiens]
Length = 196
Score = 80.9 bits (198), Expect = 9e-16
Identities = 41/131 (31%), Positives = 72/131 (54%), Gaps = 10/131 (7%)
Query: 104 MEEEFLKSQISSVLKRQEQMAIKLCQELIIHTS------DHRCNPCPKMWQWYQNSCYYF 157
M+ +L+ + + +Q+A + CQ ++ + H+C+PC W++Y +SCY F
Sbjct: 24 MQRNYLQGENENRTGTLQQLAKRFCQYVVKQSELKGTFKGHKCSPCDTNWRYYGDSCYGF 83
Query: 158 TTNEEKTWANSRKDCIDKNSTLVKIDSLEEKDFLMSQPLLMFSFFWLGLSWDSSGRSWFW 217
TW S++ C D N+TL+KID+ +++ ++ L+ W+GLS S W W
Sbjct: 84 -FRHNLTWEESKQYCTDMNATLLKIDNRNIVEYIKARTHLI---RWVGLSRQKSNEVWKW 139
Query: 218 EDGSVPSPSLY 228
EDGSV S +++
Sbjct: 140 EDGSVISENMF 150
>gi|37675373 dendritic cell-associated C-type lectin 1 isoform a
[Homo sapiens]
Length = 247
Score = 80.5 bits (197), Expect = 1e-15
Identities = 60/201 (29%), Positives = 94/201 (46%), Gaps = 29/201 (14%)
Query: 29 KRGHPAPSPIWRHAALGLVTLCLMLLIGLVTLGMMFLQISNDINSDSEKLSQLQKTIQQQ 88
++G A SP WR A+ L LCL++L+ V LG M + SN ++ E L +
Sbjct: 33 EKGSCAASPPWRLIAVILGILCLVILVIAVVLGTMAIWRSNSGSNTLENGYFLSRN---- 88
Query: 89 QDNLSQQLGNSNNLSMEEEFLKSQISSVLKRQEQMAIKLCQELIIHTSDHRCNPCPKMWQ 148
++N SQ +S +E+ ++ + T+ +PCP W
Sbjct: 89 KENHSQPTQSS----LEDSVTPTKA-------------------VKTTGVLSSPCPPNWI 125
Query: 149 WYQNSCYYFTTNEEKTWANSRKDCIDKNSTLVKIDSLEEKDFLMSQPLLM-FSFFWLGLS 207
Y+ SCY F+ + +W S++ C S L+KIDS E F++ Q + FW+GLS
Sbjct: 126 IYEKSCYLFSMSLN-SWDGSKRQCWQLGSNLLKIDSSNELGFIVKQVSSQPDNSFWIGLS 184
Query: 208 WDSSGRSWFWEDGSVPSPSLY 228
+ W WEDGS S +L+
Sbjct: 185 RPQTEVPWLWEDGSTFSSNLF 205
>gi|223029386 CD209 molecule isoform 3 [Homo sapiens]
Length = 380
Score = 74.3 bits (181), Expect = 8e-14
Identities = 45/151 (29%), Positives = 73/151 (48%), Gaps = 7/151 (4%)
Query: 82 QKTIQQQQDNLSQQLGNSNNLSMEEEF------LKSQISSVLKRQEQMAIKLCQELIIHT 135
Q+ I Q+ L +G S ++E LK+ + + ++ +Q I +
Sbjct: 165 QQEIYQELTRLKAAVGELPEKSKQQEIYQELTRLKAAVGELPEKSKQQEIYQELTQLKAA 224
Query: 136 SDHRCNPCPKMWQWYQNSCYYFTTNEEKTWANSRKDCIDKNSTLVKIDSLEEKDFLMSQP 195
+ C+PCP W ++Q +CY F +N ++ W +S C + + LV I S EE++FL Q
Sbjct: 225 VERLCHPCPWEWTFFQGNCY-FMSNSQRNWHDSITACKEVGAQLVVIKSAEEQNFLQLQS 283
Query: 196 LLMFSFFWLGLSWDSSGRSWFWEDGSVPSPS 226
F W+GLS + +W W DGS PS
Sbjct: 284 SRSNRFTWMGLSDLNQEGTWQWVDGSPLLPS 314
>gi|223029382 CD209 molecule isoform 6 [Homo sapiens]
Length = 360
Score = 74.3 bits (181), Expect = 8e-14
Identities = 45/151 (29%), Positives = 73/151 (48%), Gaps = 7/151 (4%)
Query: 82 QKTIQQQQDNLSQQLGNSNNLSMEEEF------LKSQISSVLKRQEQMAIKLCQELIIHT 135
Q+ I Q+ L +G S ++E LK+ + + ++ +Q I +
Sbjct: 145 QQEIYQELTRLKAAVGELPEKSKQQEIYQELTRLKAAVGELPEKSKQQEIYQELTQLKAA 204
Query: 136 SDHRCNPCPKMWQWYQNSCYYFTTNEEKTWANSRKDCIDKNSTLVKIDSLEEKDFLMSQP 195
+ C+PCP W ++Q +CY F +N ++ W +S C + + LV I S EE++FL Q
Sbjct: 205 VERLCHPCPWEWTFFQGNCY-FMSNSQRNWHDSITACKEVGAQLVVIKSAEEQNFLQLQS 263
Query: 196 LLMFSFFWLGLSWDSSGRSWFWEDGSVPSPS 226
F W+GLS + +W W DGS PS
Sbjct: 264 SRSNRFTWMGLSDLNQEGTWQWVDGSPLLPS 294
>gi|10863957 CD209 molecule isoform 1 [Homo sapiens]
Length = 404
Score = 74.3 bits (181), Expect = 8e-14
Identities = 45/151 (29%), Positives = 73/151 (48%), Gaps = 7/151 (4%)
Query: 82 QKTIQQQQDNLSQQLGNSNNLSMEEEF------LKSQISSVLKRQEQMAIKLCQELIIHT 135
Q+ I Q+ L +G S ++E LK+ + + ++ +Q I +
Sbjct: 189 QQEIYQELTRLKAAVGELPEKSKQQEIYQELTRLKAAVGELPEKSKQQEIYQELTQLKAA 248
Query: 136 SDHRCNPCPKMWQWYQNSCYYFTTNEEKTWANSRKDCIDKNSTLVKIDSLEEKDFLMSQP 195
+ C+PCP W ++Q +CY F +N ++ W +S C + + LV I S EE++FL Q
Sbjct: 249 VERLCHPCPWEWTFFQGNCY-FMSNSQRNWHDSITACKEVGAQLVVIKSAEEQNFLQLQS 307
Query: 196 LLMFSFFWLGLSWDSSGRSWFWEDGSVPSPS 226
F W+GLS + +W W DGS PS
Sbjct: 308 SRSNRFTWMGLSDLNQEGTWQWVDGSPLLPS 338
>gi|167614498 killer cell lectin-like receptor subfamily D, member 1
isoform 1 [Homo sapiens]
Length = 179
Score = 73.6 bits (179), Expect = 1e-13
Identities = 34/94 (36%), Positives = 54/94 (57%), Gaps = 5/94 (5%)
Query: 137 DHRCNPCPKMWQWYQNSCYYFTTNEEKTWANSRKDCIDKNSTLVKIDSLEEKDFLMSQPL 196
D C C + W Y+ +CY F ++E+KTW SR C + S+L+++ + +E DF+ S
Sbjct: 55 DSDCCSCQEKWVGYRCNCY-FISSEQKTWNESRHLCASQKSSLLQLQNTDELDFMSSSQ- 112
Query: 197 LMFSFFWLGLSWDSSGRSWFWEDGSVPSPSLYVS 230
F+W+GLS+ +W WE+GS S L+ S
Sbjct: 113 ---QFYWIGLSYSEEHTAWLWENGSALSQYLFPS 143
>gi|7669499 killer cell lectin-like receptor subfamily D, member 1
isoform 2 [Homo sapiens]
Length = 148
Score = 73.6 bits (179), Expect = 1e-13
Identities = 34/94 (36%), Positives = 54/94 (57%), Gaps = 5/94 (5%)
Query: 137 DHRCNPCPKMWQWYQNSCYYFTTNEEKTWANSRKDCIDKNSTLVKIDSLEEKDFLMSQPL 196
D C C + W Y+ +CY F ++E+KTW SR C + S+L+++ + +E DF+ S
Sbjct: 24 DSDCCSCQEKWVGYRCNCY-FISSEQKTWNESRHLCASQKSSLLQLQNTDELDFMSSSQ- 81
Query: 197 LMFSFFWLGLSWDSSGRSWFWEDGSVPSPSLYVS 230
F+W+GLS+ +W WE+GS S L+ S
Sbjct: 82 ---QFYWIGLSYSEEHTAWLWENGSALSQYLFPS 112
>gi|4504889 killer cell lectin-like receptor subfamily D, member 1
isoform 1 [Homo sapiens]
Length = 179
Score = 73.6 bits (179), Expect = 1e-13
Identities = 34/94 (36%), Positives = 54/94 (57%), Gaps = 5/94 (5%)
Query: 137 DHRCNPCPKMWQWYQNSCYYFTTNEEKTWANSRKDCIDKNSTLVKIDSLEEKDFLMSQPL 196
D C C + W Y+ +CY F ++E+KTW SR C + S+L+++ + +E DF+ S
Sbjct: 55 DSDCCSCQEKWVGYRCNCY-FISSEQKTWNESRHLCASQKSSLLQLQNTDELDFMSSSQ- 112
Query: 197 LMFSFFWLGLSWDSSGRSWFWEDGSVPSPSLYVS 230
F+W+GLS+ +W WE+GS S L+ S
Sbjct: 113 ---QFYWIGLSYSEEHTAWLWENGSALSQYLFPS 143
>gi|223029384 CD209 molecule isoform 7 [Homo sapiens]
Length = 312
Score = 72.0 bits (175), Expect = 4e-13
Identities = 62/226 (27%), Positives = 100/226 (44%), Gaps = 37/226 (16%)
Query: 30 RGHPAPSPIWRHAALGLVTLCLMLLIGLVTLGMMFLQISNDINSDSEKLSQLQKTIQQQQ 89
RG+ + + H L L L LL GL+ +Q+S +S S++ S+ Q I Q
Sbjct: 29 RGYKSLAGCLGHGPLVLQLLSFTLLAGLL------VQVSKVPSSISQEQSR-QDAIYQNL 81
Query: 90 DNLSQQLGNSNNLSMEEEF------LKSQISSVLKRQEQMAI------------------ 125
L +G + S +E LK+ + + ++ + I
Sbjct: 82 TQLKAAVGELSEKSKLQEIYQELTQLKAAVGELPEKSKLQEIYQELTRLKAAVGELPEKS 141
Query: 126 ---KLCQEL--IIHTSDHRCNPCPKMWQWYQNSCYYFTTNEEKTWANSRKDCIDKNSTLV 180
++ QEL + + C+PCP W ++Q +CY F +N ++ W +S C + + LV
Sbjct: 142 KLQEIYQELTWLKAAVERLCHPCPWEWTFFQGNCY-FMSNSQRNWHDSITACKEVGAQLV 200
Query: 181 KIDSLEEKDFLMSQPLLMFSFFWLGLSWDSSGRSWFWEDGSVPSPS 226
I S EE++FL Q F W+GLS + +W W DGS PS
Sbjct: 201 VIKSAEEQNFLQLQSSRSNRFTWMGLSDLNQEGTWQWVDGSPLLPS 246
>gi|223029517 CD209 molecule isoform 8 [Homo sapiens]
Length = 243
Score = 70.9 bits (172), Expect = 9e-13
Identities = 41/116 (35%), Positives = 60/116 (51%), Gaps = 3/116 (2%)
Query: 111 SQISSVLKRQEQMAIKLCQELIIHTSDHRCNPCPKMWQWYQNSCYYFTTNEEKTWANSRK 170
S IS RQ+ + L Q + + C+PCP W ++Q +CY F +N ++ W +S
Sbjct: 65 SSISQEQSRQDAIYQNLTQ--LKAAVERLCHPCPWEWTFFQGNCY-FMSNSQRNWHDSIT 121
Query: 171 DCIDKNSTLVKIDSLEEKDFLMSQPLLMFSFFWLGLSWDSSGRSWFWEDGSVPSPS 226
C + + LV I S EE++FL Q F W+GLS + +W W DGS PS
Sbjct: 122 ACKEVGAQLVVIKSAEEQNFLQLQSSRSNRFTWMGLSDLNQEGTWQWVDGSPLLPS 177
>gi|223278347 C-type lectin domain family 4, member M isoform 9
[Homo sapiens]
Length = 353
Score = 70.9 bits (172), Expect = 9e-13
Identities = 52/156 (33%), Positives = 79/156 (50%), Gaps = 12/156 (7%)
Query: 79 SQLQKTIQQQQDNLSQQLGNSNNLSMEEEF------LKSQISSVLKRQEQMAIKLCQELI 132
S+LQ+ I Q+ L +G S +E LK+ + + + +Q I QEL
Sbjct: 153 SKLQE-IYQELTRLKAAVGELPEKSKLQEIYQELTQLKAAVGELPDQSKQQQIY--QELT 209
Query: 133 -IHTSDHR-CNPCPKMWQWYQNSCYYFTTNEEKTWANSRKDCIDKNSTLVKIDSLEEKDF 190
+ T+ R C CPK W ++Q +CY F +N ++ W +S C + + LV I + EE++F
Sbjct: 210 DLKTAFERLCRHCPKDWTFFQGNCY-FMSNSQRNWHDSVTACQEVRAQLVVIKTAEEQNF 268
Query: 191 LMSQPLLMFSFFWLGLSWDSSGRSWFWEDGSVPSPS 226
L Q F W+GLS + +W W DGS SPS
Sbjct: 269 LQLQTSRSNRFSWMGLSDLNQEGTWQWVDGSPLSPS 304
Score = 28.1 bits (61), Expect = 6.7
Identities = 26/86 (30%), Positives = 40/86 (46%), Gaps = 3/86 (3%)
Query: 22 RDGNNLRKRGHPAPSPIWRHAALGLVTLCLMLLIGLVTLGMMFLQISNDINSDSEKLSQL 81
RD + GH + + H AL L L MLL G+ L + +Q+S +S S++ S+
Sbjct: 29 RDFQFQQIHGHKSSTGCLGHGALVLQLLSFMLLAGV--LVAILVQVSKVPSSLSQEQSE- 85
Query: 82 QKTIQQQQDNLSQQLGNSNNLSMEEE 107
Q I Q L +G + S +E
Sbjct: 86 QDAIYQNLTQLKAAVGELSEKSKLQE 111
>gi|223278337 C-type lectin domain family 4, member M isoform 12
[Homo sapiens]
Length = 375
Score = 70.9 bits (172), Expect = 9e-13
Identities = 52/156 (33%), Positives = 79/156 (50%), Gaps = 12/156 (7%)
Query: 79 SQLQKTIQQQQDNLSQQLGNSNNLSMEEEF------LKSQISSVLKRQEQMAIKLCQELI 132
S+LQ+ I Q+ L +G S +E LK+ + + + +Q I QEL
Sbjct: 175 SKLQE-IYQELTELKAAVGELPEKSKLQEIYQELTQLKAAVGELPDQSKQQQIY--QELT 231
Query: 133 -IHTSDHR-CNPCPKMWQWYQNSCYYFTTNEEKTWANSRKDCIDKNSTLVKIDSLEEKDF 190
+ T+ R C CPK W ++Q +CY F +N ++ W +S C + + LV I + EE++F
Sbjct: 232 DLKTAFERLCRHCPKDWTFFQGNCY-FMSNSQRNWHDSVTACQEVRAQLVVIKTAEEQNF 290
Query: 191 LMSQPLLMFSFFWLGLSWDSSGRSWFWEDGSVPSPS 226
L Q F W+GLS + +W W DGS SPS
Sbjct: 291 LQLQTSRSNRFSWMGLSDLNQEGTWQWVDGSPLSPS 326
Score = 28.1 bits (61), Expect = 6.7
Identities = 26/86 (30%), Positives = 40/86 (46%), Gaps = 3/86 (3%)
Query: 22 RDGNNLRKRGHPAPSPIWRHAALGLVTLCLMLLIGLVTLGMMFLQISNDINSDSEKLSQL 81
RD + GH + + H AL L L MLL G+ L + +Q+S +S S++ S+
Sbjct: 28 RDFQFQQIHGHKSSTGCLGHGALVLQLLSFMLLAGV--LVAILVQVSKVPSSLSQEQSE- 84
Query: 82 QKTIQQQQDNLSQQLGNSNNLSMEEE 107
Q I Q L +G + S +E
Sbjct: 85 QDAIYQNLTQLKAAVGELSEKSKLQE 110
>gi|223278335 C-type lectin domain family 4, member M isoform 2
[Homo sapiens]
Length = 348
Score = 70.9 bits (172), Expect = 9e-13
Identities = 52/156 (33%), Positives = 79/156 (50%), Gaps = 12/156 (7%)
Query: 79 SQLQKTIQQQQDNLSQQLGNSNNLSMEEEF------LKSQISSVLKRQEQMAIKLCQELI 132
S+LQ+ I Q+ L +G S +E LK+ + + + +Q I QEL
Sbjct: 148 SKLQE-IYQELTELKAAVGELPEKSKLQEIYQELTQLKAAVGELPDQSKQQQIY--QELT 204
Query: 133 -IHTSDHR-CNPCPKMWQWYQNSCYYFTTNEEKTWANSRKDCIDKNSTLVKIDSLEEKDF 190
+ T+ R C CPK W ++Q +CY F +N ++ W +S C + + LV I + EE++F
Sbjct: 205 DLKTAFERLCRHCPKDWTFFQGNCY-FMSNSQRNWHDSVTACQEVRAQLVVIKTAEEQNF 263
Query: 191 LMSQPLLMFSFFWLGLSWDSSGRSWFWEDGSVPSPS 226
L Q F W+GLS + +W W DGS SPS
Sbjct: 264 LQLQTSRSNRFSWMGLSDLNQEGTWQWVDGSPLSPS 299
>gi|223278350 C-type lectin domain family 4, member M isoform 8
[Homo sapiens]
Length = 376
Score = 70.9 bits (172), Expect = 9e-13
Identities = 52/156 (33%), Positives = 79/156 (50%), Gaps = 12/156 (7%)
Query: 79 SQLQKTIQQQQDNLSQQLGNSNNLSMEEEF------LKSQISSVLKRQEQMAIKLCQELI 132
S+LQ+ I Q+ L +G S +E LK+ + + + +Q I QEL
Sbjct: 176 SKLQE-IYQELTELKAAVGELPEKSKLQEIYQELTQLKAAVGELPDQSKQQQIY--QELT 232
Query: 133 -IHTSDHR-CNPCPKMWQWYQNSCYYFTTNEEKTWANSRKDCIDKNSTLVKIDSLEEKDF 190
+ T+ R C CPK W ++Q +CY F +N ++ W +S C + + LV I + EE++F
Sbjct: 233 DLKTAFERLCRHCPKDWTFFQGNCY-FMSNSQRNWHDSVTACQEVRAQLVVIKTAEEQNF 291
Query: 191 LMSQPLLMFSFFWLGLSWDSSGRSWFWEDGSVPSPS 226
L Q F W+GLS + +W W DGS SPS
Sbjct: 292 LQLQTSRSNRFSWMGLSDLNQEGTWQWVDGSPLSPS 327
Score = 28.1 bits (61), Expect = 6.7
Identities = 26/86 (30%), Positives = 40/86 (46%), Gaps = 3/86 (3%)
Query: 22 RDGNNLRKRGHPAPSPIWRHAALGLVTLCLMLLIGLVTLGMMFLQISNDINSDSEKLSQL 81
RD + GH + + H AL L L MLL G+ L + +Q+S +S S++ S+
Sbjct: 29 RDFQFQQIHGHKSSTGCLGHGALVLQLLSFMLLAGV--LVAILVQVSKVPSSLSQEQSE- 85
Query: 82 QKTIQQQQDNLSQQLGNSNNLSMEEE 107
Q I Q L +G + S +E
Sbjct: 86 QDAIYQNLTQLKAAVGELSEKSKLQE 111
>gi|42542390 C-type lectin domain family 4, member M isoform 1 [Homo
sapiens]
Length = 399
Score = 70.9 bits (172), Expect = 9e-13
Identities = 52/156 (33%), Positives = 79/156 (50%), Gaps = 12/156 (7%)
Query: 79 SQLQKTIQQQQDNLSQQLGNSNNLSMEEEF------LKSQISSVLKRQEQMAIKLCQELI 132
S+LQ+ I Q+ L +G S +E LK+ + + + +Q I QEL
Sbjct: 199 SKLQE-IYQELTELKAAVGELPEKSKLQEIYQELTQLKAAVGELPDQSKQQQIY--QELT 255
Query: 133 -IHTSDHR-CNPCPKMWQWYQNSCYYFTTNEEKTWANSRKDCIDKNSTLVKIDSLEEKDF 190
+ T+ R C CPK W ++Q +CY F +N ++ W +S C + + LV I + EE++F
Sbjct: 256 DLKTAFERLCRHCPKDWTFFQGNCY-FMSNSQRNWHDSVTACQEVRAQLVVIKTAEEQNF 314
Query: 191 LMSQPLLMFSFFWLGLSWDSSGRSWFWEDGSVPSPS 226
L Q F W+GLS + +W W DGS SPS
Sbjct: 315 LQLQTSRSNRFSWMGLSDLNQEGTWQWVDGSPLSPS 350
Score = 28.1 bits (61), Expect = 6.7
Identities = 26/86 (30%), Positives = 40/86 (46%), Gaps = 3/86 (3%)
Query: 22 RDGNNLRKRGHPAPSPIWRHAALGLVTLCLMLLIGLVTLGMMFLQISNDINSDSEKLSQL 81
RD + GH + + H AL L L MLL G+ L + +Q+S +S S++ S+
Sbjct: 29 RDFQFQQIHGHKSSTGCLGHGALVLQLLSFMLLAGV--LVAILVQVSKVPSSLSQEQSE- 85
Query: 82 QKTIQQQQDNLSQQLGNSNNLSMEEE 107
Q I Q L +G + S +E
Sbjct: 86 QDAIYQNLTQLKAAVGELSEKSKLQE 111
>gi|223278339 C-type lectin domain family 4, member M isoform 7
[Homo sapiens]
Length = 263
Score = 70.5 bits (171), Expect = 1e-12
Identities = 49/174 (28%), Positives = 82/174 (47%), Gaps = 8/174 (4%)
Query: 59 TLGMMFLQISNDINSDSEKLSQLQKTIQQQQDNLSQQLGNSNNLSMEEEF------LKSQ 112
T+ + +S +S S++ S+ Q I Q L +G + S +E LK+
Sbjct: 43 TVPFLLGPVSKVPSSLSQEQSE-QDAIYQNLTQLKAAVGELSEKSKLQEIYQELTQLKAA 101
Query: 113 ISSVLKRQEQMAIKLCQELIIHTSDHRCNPCPKMWQWYQNSCYYFTTNEEKTWANSRKDC 172
+ + ++ + I + + C CPK W ++Q +CY F +N ++ W +S C
Sbjct: 102 VGELPEKSKLQEIYQELTRLKAAVERLCRHCPKDWTFFQGNCY-FMSNSQRNWHDSVTAC 160
Query: 173 IDKNSTLVKIDSLEEKDFLMSQPLLMFSFFWLGLSWDSSGRSWFWEDGSVPSPS 226
+ + LV I + EE++FL Q F W+GLS + +W W DGS SPS
Sbjct: 161 QEVRAQLVVIKTAEEQNFLQLQTSRSNRFSWMGLSDLNQEGTWQWVDGSPLSPS 214
>gi|223029380 CD209 molecule isoform 5 [Homo sapiens]
Length = 268
Score = 70.5 bits (171), Expect = 1e-12
Identities = 43/156 (27%), Positives = 76/156 (48%), Gaps = 3/156 (1%)
Query: 73 SDSEKLSQLQKTIQQQQDNLSQQLGNSNNLSMEEEF--LKSQISSVLKRQEQMAIKLCQE 130
S+ KL ++ + + Q + + + S + +E LK+ + + ++ + I
Sbjct: 48 SEKSKLQEIYQELTQLKAAVGELPEKSKLQEIYQELTRLKAAVGELPEKSKLQEIYQELT 107
Query: 131 LIIHTSDHRCNPCPKMWQWYQNSCYYFTTNEEKTWANSRKDCIDKNSTLVKIDSLEEKDF 190
+ + C+PCP W ++Q +CY F +N ++ W +S C + + LV I S EE++F
Sbjct: 108 WLKAAVERLCHPCPWEWTFFQGNCY-FMSNSQRNWHDSITACKEVGAQLVVIKSAEEQNF 166
Query: 191 LMSQPLLMFSFFWLGLSWDSSGRSWFWEDGSVPSPS 226
L Q F W+GLS + +W W DGS PS
Sbjct: 167 LQLQSSRSNRFTWMGLSDLNQEGTWQWVDGSPLLPS 202
>gi|20149533 Fc fragment of IgE, low affinity II, receptor for
(CD23A) [Homo sapiens]
Length = 321
Score = 70.5 bits (171), Expect = 1e-12
Identities = 50/158 (31%), Positives = 75/158 (47%), Gaps = 8/158 (5%)
Query: 68 SNDINSDSEKLSQLQKTIQQQQDNLSQQLG----NSNNLSMEEEFLKSQISSVLKRQEQM 123
S I+ + E+L Q+ ++ Q LS L + ++ +E +++ S +L+R +
Sbjct: 85 STQISQELEELRAEQQRLKSQDLELSWNLNGLQADLSSFKSQELNERNEASDLLERLREE 144
Query: 124 AIKLCQELIIHTSDHRCNPCPKMWQWYQNSCYYFTTNEEKTWANSRKDCIDKNSTLVKID 183
KL EL + +S CN CP+ W +Q CYYF K W ++R C D LV I
Sbjct: 145 VTKLRMELQV-SSGFVCNTCPEKWINFQRKCYYFGKG-TKQWVHARYACDDMEGQLVSIH 202
Query: 184 SLEEKDFLMSQPLLMFSFFWLGLSWDSSGRSWFWEDGS 221
S EE+DFL S W+GL + W DGS
Sbjct: 203 SPEEQDFLTKHASHTGS--WIGLRNLDLKGEFIWVDGS 238
>gi|4502251 asialoglycoprotein receptor 1 [Homo sapiens]
Length = 291
Score = 69.3 bits (168), Expect = 3e-12
Identities = 59/231 (25%), Positives = 100/231 (43%), Gaps = 23/231 (9%)
Query: 9 TLTFQDSAGARNNRDGNNLRKRGHPAPSPIWRHAALG------LVTLCLMLLIGLVTLGM 62
T +QD N ++ ++G P P P+ + G + L L+LL+ + +G
Sbjct: 2 TKEYQDLQHLDNEESDHHQLRKGPPPPQPLLQRLCSGPRLLLLSLGLSLLLLVVVCVIGS 61
Query: 63 MFLQISNDINSDSEKLSQLQKTIQQQQDNLSQQLGN--------SNNLSMEEEFLKSQIS 114
Q+ ++ E S + + Q LS Q GN + L +++ L S
Sbjct: 62 QNSQLQEELRGLRETFSNFTASTEAQVKGLSTQGGNVGRKMKSLESQLEKQQKDLSEDHS 121
Query: 115 SVLKRQEQMAIKL----CQELIIHTSDHRCNPCPKMWQWYQNSCYYFTTNEEKTWANSRK 170
S+L +Q L CQ + + CP W ++ SCY+F + K WA++
Sbjct: 122 SLLLHVKQFVSDLRSLSCQMAALQGNGSERTCCPVNWVEHERSCYWF-SRSGKAWADADN 180
Query: 171 DCIDKNSTLVKIDSLEEKDFLMSQPLLMFSFFWLGLSWDSSGRSWFWEDGS 221
C +++ LV + S EE+ F+ Q + W+GL D +G W W DG+
Sbjct: 181 YCRLEDAHLVVVTSWEEQKFV--QHHIGPVNTWMGLH-DQNG-PWKWVDGT 227
>gi|223278342 C-type lectin domain family 4, member M isoform 11
[Homo sapiens]
Length = 332
Score = 68.9 bits (167), Expect = 3e-12
Identities = 34/87 (39%), Positives = 49/87 (56%), Gaps = 1/87 (1%)
Query: 140 CNPCPKMWQWYQNSCYYFTTNEEKTWANSRKDCIDKNSTLVKIDSLEEKDFLMSQPLLMF 199
C CPK W ++Q +CY F +N ++ W +S C + + LV I + EE++FL Q
Sbjct: 198 CRHCPKDWTFFQGNCY-FMSNSQRNWHDSVTACQEVRAQLVVIKTAEEQNFLQLQTSRSN 256
Query: 200 SFFWLGLSWDSSGRSWFWEDGSVPSPS 226
F W+GLS + +W W DGS SPS
Sbjct: 257 RFSWMGLSDLNQEGTWQWVDGSPLSPS 283
>gi|18426875 asialoglycoprotein receptor 2 isoform b [Homo sapiens]
Length = 287
Score = 68.9 bits (167), Expect = 3e-12
Identities = 51/183 (27%), Positives = 91/183 (49%), Gaps = 17/183 (9%)
Query: 51 LMLLIGLVTLGMMFLQISNDINSDSEKLSQLQKTIQQQQDNLSQQLGNSNN--------L 102
++LL+ + G Q+ ++ S E S + + +S G+ + L
Sbjct: 49 ILLLVVICVTGSQSAQLQAELRSLKEAFSNFSSSTLTEVQAISTHGGSVGDKITSLGAKL 108
Query: 103 SMEEEFLKSQISSVLKRQEQMAIKL----CQELIIHTSDHRCNPCPKMWQWYQNSCYYFT 158
+++ LK+ ++L + + L CQ ++H++ + CP W +Q SCY+F
Sbjct: 109 EKQQQDLKADHDALLFHLKHFPVDLRFVACQMELLHSNGSQRTCCPVNWVEHQGSCYWF- 167
Query: 159 TNEEKTWANSRKDCIDKNSTLVKIDSLEEKDFLMSQPLLMFSFFWLGLSWDSSGRSWFWE 218
++ K WA + K C +N+ LV I+S EE+ F++ Q F+ W+GL+ DS G SW W
Sbjct: 168 SHSGKAWAEAEKYCQLENAHLVVINSWEEQKFIV-QHTNPFN-TWIGLT-DSDG-SWKWV 223
Query: 219 DGS 221
DG+
Sbjct: 224 DGT 226
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.130 0.403
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,167,187
Number of Sequences: 37866
Number of extensions: 393784
Number of successful extensions: 2122
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 101
Number of HSP's successfully gapped in prelim test: 91
Number of HSP's that attempted gapping in prelim test: 1765
Number of HSP's gapped (non-prelim): 332
length of query: 232
length of database: 18,247,518
effective HSP length: 99
effective length of query: 133
effective length of database: 14,498,784
effective search space: 1928338272
effective search space used: 1928338272
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.