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Search of human proteins with 193290182
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|193290182 interleukin 17 receptor E-like [Homo sapiens]
(336 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|193290182 interleukin 17 receptor E-like [Homo sapiens] 704 0.0
gi|24430197 interleukin 17 receptor C isoform 1 precursor [Homo ... 71 2e-12
gi|90669934 interleukin 17 receptor C isoform 3 precursor [Homo ... 71 2e-12
gi|24430195 interleukin 17 receptor C isoform 2 precursor [Homo ... 71 2e-12
gi|24430210 interleukin 17 receptor E isoform 1 [Homo sapiens] 69 5e-12
gi|24430206 interleukin 17 receptor E isoform 2 [Homo sapiens] 69 5e-12
gi|24430204 interleukin 17 receptor E isoform 1 [Homo sapiens] 69 5e-12
gi|23957680 ral guanine nucleotide dissociation stimulator-like ... 34 0.21
gi|239751791 PREDICTED: hypothetical protein [Homo sapiens] 32 0.61
gi|239747867 PREDICTED: hypothetical protein [Homo sapiens] 32 0.61
gi|170784846 kelch-like 7 isoform 1 [Homo sapiens] 31 1.8
gi|170784844 kelch-like 7 isoform 2 [Homo sapiens] 31 1.8
gi|157502212 polypeptide N-acetylgalactosaminyltransferase 7 [Ho... 31 1.8
gi|4757710 amiloride-sensitive cation channel 3 isoform a [Homo ... 30 2.3
gi|9998946 amiloride-sensitive cation channel 3 isoform b [Homo ... 30 2.3
gi|9998948 amiloride-sensitive cation channel 3 isoform c [Homo ... 30 2.3
gi|239735488 v-myb myeloblastosis viral oncogene homolog isoform... 30 3.0
gi|194328727 v-myb myeloblastosis viral oncogene homolog isoform... 30 3.0
gi|239743293 PREDICTED: mucin 12 [Homo sapiens] 30 3.0
gi|239508976 PREDICTED: mucin 12, cell surface associated [Homo ... 30 3.0
gi|239735496 v-myb myeloblastosis viral oncogene homolog isoform... 30 4.0
gi|4506309 protein tyrosine phosphatase, receptor type, D isofor... 29 5.2
gi|18860890 protein tyrosine phosphatase, receptor type, D isofo... 29 5.2
gi|18860892 protein tyrosine phosphatase, receptor type, D isofo... 29 5.2
gi|239735494 v-myb myeloblastosis viral oncogene homolog isoform... 29 6.8
gi|239735492 v-myb myeloblastosis viral oncogene homolog isoform... 29 6.8
gi|46361980 v-myb myeloblastosis viral oncogene homolog isoform ... 29 6.8
gi|194328729 v-myb myeloblastosis viral oncogene homolog isoform... 29 6.8
gi|116256340 SEC31 homolog A isoform 3 [Homo sapiens] 28 8.9
gi|215820652 StAR-related lipid transfer (START) domain containi... 28 8.9
>gi|193290182 interleukin 17 receptor E-like [Homo sapiens]
Length = 336
Score = 704 bits (1818), Expect = 0.0
Identities = 336/336 (100%), Positives = 336/336 (100%)
Query: 1 MSRSVLEALTSSTAMQCVPSDGCAMLLRVRASITLHERLRGLEACAMSLDTQETQCQSVW 60
MSRSVLEALTSSTAMQCVPSDGCAMLLRVRASITLHERLRGLEACAMSLDTQETQCQSVW
Sbjct: 1 MSRSVLEALTSSTAMQCVPSDGCAMLLRVRASITLHERLRGLEACAMSLDTQETQCQSVW 60
Query: 61 VARASHRQQGGQQLQVHFGCFAVSVAQHLYVTLRTIPHFCGVQLDQRHLVEAGKLSYWVD 120
VARASHRQQGGQQLQVHFGCFAVSVAQHLYVTLRTIPHFCGVQLDQRHLVEAGKLSYWVD
Sbjct: 61 VARASHRQQGGQQLQVHFGCFAVSVAQHLYVTLRTIPHFCGVQLDQRHLVEAGKLSYWVD 120
Query: 121 RRRKAILVQVPRASGSPDYYLRLCLKRFTCEDAGAPVRVTANSVSQAVFLPYSQELPCLC 180
RRRKAILVQVPRASGSPDYYLRLCLKRFTCEDAGAPVRVTANSVSQAVFLPYSQELPCLC
Sbjct: 121 RRRKAILVQVPRASGSPDYYLRLCLKRFTCEDAGAPVRVTANSVSQAVFLPYSQELPCLC 180
Query: 181 LEGWSATPDAVRIQICPFENDTEALEVLWDTVYYHPESQTLSWEPACPVSGHVSLCWRPG 240
LEGWSATPDAVRIQICPFENDTEALEVLWDTVYYHPESQTLSWEPACPVSGHVSLCWRPG
Sbjct: 181 LEGWSATPDAVRIQICPFENDTEALEVLWDTVYYHPESQTLSWEPACPVSGHVSLCWRPG 240
Query: 241 PGAGCRKLQQSSQLVHRRVQYPLVDTQPQLCLKFSTSWGSWVRCPFEQRRFPTPPTSRCT 300
PGAGCRKLQQSSQLVHRRVQYPLVDTQPQLCLKFSTSWGSWVRCPFEQRRFPTPPTSRCT
Sbjct: 241 PGAGCRKLQQSSQLVHRRVQYPLVDTQPQLCLKFSTSWGSWVRCPFEQRRFPTPPTSRCT 300
Query: 301 CVTGGSHSSLPANAHSRPARSLQPQVTWQPPLLLPS 336
CVTGGSHSSLPANAHSRPARSLQPQVTWQPPLLLPS
Sbjct: 301 CVTGGSHSSLPANAHSRPARSLQPQVTWQPPLLLPS 336
>gi|24430197 interleukin 17 receptor C isoform 1 precursor [Homo
sapiens]
Length = 791
Score = 70.9 bits (172), Expect = 2e-12
Identities = 49/175 (28%), Positives = 79/175 (45%), Gaps = 22/175 (12%)
Query: 166 QAVFLPYSQELPCLCLEGWSATPDAVRIQICPFENDTEALEVLWDTVYYHPES-QTLSWE 224
Q + L ++ +PCLC++ W PD+VR ICPF D A + LW + Q+ +
Sbjct: 329 QIITLNHTDLVPCLCIQVWPLEPDSVRTNICPFREDPRAHQNLWQAARLRLLTLQSWLLD 388
Query: 225 PACPVSGHVSLCWRPGPGAGCR----KLQQSSQLVHRRVQYPLVDTQPQLCLKFSTS--- 277
C + +LCWR G C+ L + V + +++PL+ P LC++ ++S
Sbjct: 389 APCSLPAEAALCWRAPGGDPCQPLVPPLSWENVTVDKVLEFPLLKGHPNLCVQVNSSEKL 448
Query: 278 ------WGSWVRCPFE------QRRFPTPPTSRCTCVTGGSHSSLPANAHSRPAR 320
W + P + + R P S C G +SLP+ A +R AR
Sbjct: 449 QLQECLWADSLG-PLKDDVLLLETRGPQDNRSLCALEPSGC-TSLPSKASTRAAR 501
>gi|90669934 interleukin 17 receptor C isoform 3 precursor [Homo
sapiens]
Length = 705
Score = 70.9 bits (172), Expect = 2e-12
Identities = 49/175 (28%), Positives = 79/175 (45%), Gaps = 22/175 (12%)
Query: 166 QAVFLPYSQELPCLCLEGWSATPDAVRIQICPFENDTEALEVLWDTVYYHPES-QTLSWE 224
Q + L ++ +PCLC++ W PD+VR ICPF D A + LW + Q+ +
Sbjct: 243 QIITLNHTDLVPCLCIQVWPLEPDSVRTNICPFREDPRAHQNLWQAARLRLLTLQSWLLD 302
Query: 225 PACPVSGHVSLCWRPGPGAGCR----KLQQSSQLVHRRVQYPLVDTQPQLCLKFSTS--- 277
C + +LCWR G C+ L + V + +++PL+ P LC++ ++S
Sbjct: 303 APCSLPAEAALCWRAPGGDPCQPLVPPLSWENVTVDKVLEFPLLKGHPNLCVQVNSSEKL 362
Query: 278 ------WGSWVRCPFE------QRRFPTPPTSRCTCVTGGSHSSLPANAHSRPAR 320
W + P + + R P S C G +SLP+ A +R AR
Sbjct: 363 QLQECLWADSLG-PLKDDVLLLETRGPQDNRSLCALEPSGC-TSLPSKASTRAAR 415
>gi|24430195 interleukin 17 receptor C isoform 2 precursor [Homo
sapiens]
Length = 720
Score = 70.9 bits (172), Expect = 2e-12
Identities = 49/175 (28%), Positives = 79/175 (45%), Gaps = 22/175 (12%)
Query: 166 QAVFLPYSQELPCLCLEGWSATPDAVRIQICPFENDTEALEVLWDTVYYHPES-QTLSWE 224
Q + L ++ +PCLC++ W PD+VR ICPF D A + LW + Q+ +
Sbjct: 258 QIITLNHTDLVPCLCIQVWPLEPDSVRTNICPFREDPRAHQNLWQAARLRLLTLQSWLLD 317
Query: 225 PACPVSGHVSLCWRPGPGAGCR----KLQQSSQLVHRRVQYPLVDTQPQLCLKFSTS--- 277
C + +LCWR G C+ L + V + +++PL+ P LC++ ++S
Sbjct: 318 APCSLPAEAALCWRAPGGDPCQPLVPPLSWENVTVDKVLEFPLLKGHPNLCVQVNSSEKL 377
Query: 278 ------WGSWVRCPFE------QRRFPTPPTSRCTCVTGGSHSSLPANAHSRPAR 320
W + P + + R P S C G +SLP+ A +R AR
Sbjct: 378 QLQECLWADSLG-PLKDDVLLLETRGPQDNRSLCALEPSGC-TSLPSKASTRAAR 430
>gi|24430210 interleukin 17 receptor E isoform 1 [Homo sapiens]
Length = 667
Score = 69.3 bits (168), Expect = 5e-12
Identities = 62/191 (32%), Positives = 87/191 (45%), Gaps = 15/191 (7%)
Query: 106 QRHLVEAGKLSYWVDRRRKAILVQVPRASGSPDYYLRLCLK-RFTCEDAGAPVRVTAN-S 163
QRH G + D +A ++V +SG P+ +RLC + CE+ +P V S
Sbjct: 172 QRH----GGPEFSFDLLPEARAIRVTISSG-PEVSVRLCHQWALECEELSSPYDVQKIVS 226
Query: 164 VSQAVFLPYSQELPCLCLEGWSATPDAVRIQICPFENDTEAL-EVLWDTVYYHPESQ--- 219
V LPY LPCLC+E D VR + CPF++ EA W +V++ SQ
Sbjct: 227 GGHTVELPYEFLLPCLCIEASYLQEDTVRRKKCPFQSWPEAYGSDFWKSVHFTDYSQHTQ 286
Query: 220 -TLSWEPACPVSGHVSLCWRPGPGAGCRKLQQSSQLVHRRVQYPL--VDTQPQLCLKFST 276
++ CP+ +LC R C+ L ++ Y L VD PQLC KFS
Sbjct: 287 MVMALTLRCPLKLEAALCQRHDWHTLCKDLPNATAR-ESDGWYVLEKVDLHPQLCFKFSF 345
Query: 277 SWGSWVRCPFE 287
S V CP +
Sbjct: 346 GNSSHVECPHQ 356
>gi|24430206 interleukin 17 receptor E isoform 2 [Homo sapiens]
Length = 551
Score = 69.3 bits (168), Expect = 5e-12
Identities = 62/191 (32%), Positives = 87/191 (45%), Gaps = 15/191 (7%)
Query: 106 QRHLVEAGKLSYWVDRRRKAILVQVPRASGSPDYYLRLCLK-RFTCEDAGAPVRVTAN-S 163
QRH G + D +A ++V +SG P+ +RLC + CE+ +P V S
Sbjct: 56 QRH----GGPEFSFDLLPEARAIRVTISSG-PEVSVRLCHQWALECEELSSPYDVQKIVS 110
Query: 164 VSQAVFLPYSQELPCLCLEGWSATPDAVRIQICPFENDTEAL-EVLWDTVYYHPESQ--- 219
V LPY LPCLC+E D VR + CPF++ EA W +V++ SQ
Sbjct: 111 GGHTVELPYEFLLPCLCIEASYLQEDTVRRKKCPFQSWPEAYGSDFWKSVHFTDYSQHTQ 170
Query: 220 -TLSWEPACPVSGHVSLCWRPGPGAGCRKLQQSSQLVHRRVQYPL--VDTQPQLCLKFST 276
++ CP+ +LC R C+ L ++ Y L VD PQLC KFS
Sbjct: 171 MVMALTLRCPLKLEAALCQRHDWHTLCKDLPNATAR-ESDGWYVLEKVDLHPQLCFKFSF 229
Query: 277 SWGSWVRCPFE 287
S V CP +
Sbjct: 230 GNSSHVECPHQ 240
>gi|24430204 interleukin 17 receptor E isoform 1 [Homo sapiens]
Length = 667
Score = 69.3 bits (168), Expect = 5e-12
Identities = 62/191 (32%), Positives = 87/191 (45%), Gaps = 15/191 (7%)
Query: 106 QRHLVEAGKLSYWVDRRRKAILVQVPRASGSPDYYLRLCLK-RFTCEDAGAPVRVTAN-S 163
QRH G + D +A ++V +SG P+ +RLC + CE+ +P V S
Sbjct: 172 QRH----GGPEFSFDLLPEARAIRVTISSG-PEVSVRLCHQWALECEELSSPYDVQKIVS 226
Query: 164 VSQAVFLPYSQELPCLCLEGWSATPDAVRIQICPFENDTEAL-EVLWDTVYYHPESQ--- 219
V LPY LPCLC+E D VR + CPF++ EA W +V++ SQ
Sbjct: 227 GGHTVELPYEFLLPCLCIEASYLQEDTVRRKKCPFQSWPEAYGSDFWKSVHFTDYSQHTQ 286
Query: 220 -TLSWEPACPVSGHVSLCWRPGPGAGCRKLQQSSQLVHRRVQYPL--VDTQPQLCLKFST 276
++ CP+ +LC R C+ L ++ Y L VD PQLC KFS
Sbjct: 287 MVMALTLRCPLKLEAALCQRHDWHTLCKDLPNATAR-ESDGWYVLEKVDLHPQLCFKFSF 345
Query: 277 SWGSWVRCPFE 287
S V CP +
Sbjct: 346 GNSSHVECPHQ 356
>gi|23957680 ral guanine nucleotide dissociation stimulator-like 4
[Homo sapiens]
Length = 473
Score = 33.9 bits (76), Expect = 0.21
Identities = 24/89 (26%), Positives = 41/89 (46%), Gaps = 10/89 (11%)
Query: 172 YSQELPCLCLEGWSATPDAVRI-------QICPFENDTEALEVLWDTVY-YHPESQTLSW 223
YS L L E TP R+ Q+CPF++ T+ L + ++ + PE+ ++ +
Sbjct: 19 YSAVLQGLWEENVCGTPGRTRVCTALLYGQVCPFQDSTDGLRTITSILFNWPPENTSVYY 78
Query: 224 EPACPVSGHVSLCWR--PGPGAGCRKLQQ 250
+P S + L +R PG G Q+
Sbjct: 79 QPPQRSSFRIKLAFRNLSWPGLGLEDHQE 107
>gi|239751791 PREDICTED: hypothetical protein [Homo sapiens]
Length = 650
Score = 32.3 bits (72), Expect = 0.61
Identities = 30/100 (30%), Positives = 36/100 (36%), Gaps = 28/100 (28%)
Query: 252 SQLVHRRVQYPLVDTQ----------PQL------------CLKFSTSWGSWVR--CPFE 287
+QL H +VQ P D PQL C ++ S G W R C
Sbjct: 367 AQLAHEQVQLPFHDVHLTFCQLLLPPPQLLLLEALLLFQSSCSEWKDSSGIWNRADCSMT 426
Query: 288 QRRFPTPPTSRCTCVTGGSHSSLPANAHSRPARSLQPQVT 327
RF P S +G HS P SRP S P +T
Sbjct: 427 SSRFKMLPKSGRPWGSGSQHSGRP----SRPRLSAPPDIT 462
>gi|239747867 PREDICTED: hypothetical protein [Homo sapiens]
Length = 384
Score = 32.3 bits (72), Expect = 0.61
Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Query: 235 LCWRPGPGAGCRKLQQSSQLVHRRVQYPLVDTQPQLCLKFSTSWGSWVRC 284
LC PGP + C+ L + + V +V PL+ +PQ + W W+ C
Sbjct: 32 LCGSPGPESRCQPLNRGTYPVRSQVAAPLLSPEPQTHHPDTPLW-PWLLC 80
>gi|170784846 kelch-like 7 isoform 1 [Homo sapiens]
Length = 586
Score = 30.8 bits (68), Expect = 1.8
Identities = 14/27 (51%), Positives = 18/27 (66%), Gaps = 2/27 (7%)
Query: 266 TQPQLCLKFSTSWGSW--VRCPFEQRR 290
+QPQ C F+ SW +RCPFE+RR
Sbjct: 301 SQPQSCRYFNPKDYSWTDIRCPFEKRR 327
>gi|170784844 kelch-like 7 isoform 2 [Homo sapiens]
Length = 564
Score = 30.8 bits (68), Expect = 1.8
Identities = 14/27 (51%), Positives = 18/27 (66%), Gaps = 2/27 (7%)
Query: 266 TQPQLCLKFSTSWGSW--VRCPFEQRR 290
+QPQ C F+ SW +RCPFE+RR
Sbjct: 279 SQPQSCRYFNPKDYSWTDIRCPFEKRR 305
>gi|157502212 polypeptide N-acetylgalactosaminyltransferase 7 [Homo
sapiens]
Length = 657
Score = 30.8 bits (68), Expect = 1.8
Identities = 20/62 (32%), Positives = 30/62 (48%), Gaps = 6/62 (9%)
Query: 168 VFLPYSQELPCLCLEGWSATPDAVRIQICP-FENDTEALEVLWDTV--YYH---PESQTL 221
+F+P S+ LEGW P + + P +N +EV WD Y++ PESQ L
Sbjct: 431 LFVPCSRVGHIYRLEGWQGNPPPIYVGSSPTLKNYVRVVEVWWDEYKDYFYASRPESQAL 490
Query: 222 SW 223
+
Sbjct: 491 PY 492
>gi|4757710 amiloride-sensitive cation channel 3 isoform a [Homo
sapiens]
Length = 531
Score = 30.4 bits (67), Expect = 2.3
Identities = 24/81 (29%), Positives = 36/81 (44%), Gaps = 10/81 (12%)
Query: 255 VHRRVQYPLVDTQPQLCLKFSTSWGSWVRCPFEQRRFPTPPTSRCTCVTGGSHSSLPANA 314
+H + + P++D QL L S + ++V C +Q F PP C S +SL N
Sbjct: 241 IHSQEEPPIID---QLGLGVSPGYQTFVSCQQQQLSFLPPPWGDC------SSASLNPNY 291
Query: 315 HSRPARSL-QPQVTWQPPLLL 334
P+ L P + PP L
Sbjct: 292 EPEPSDPLGSPSPSPSPPYTL 312
>gi|9998946 amiloride-sensitive cation channel 3 isoform b [Homo
sapiens]
Length = 549
Score = 30.4 bits (67), Expect = 2.3
Identities = 24/81 (29%), Positives = 36/81 (44%), Gaps = 10/81 (12%)
Query: 255 VHRRVQYPLVDTQPQLCLKFSTSWGSWVRCPFEQRRFPTPPTSRCTCVTGGSHSSLPANA 314
+H + + P++D QL L S + ++V C +Q F PP C S +SL N
Sbjct: 241 IHSQEEPPIID---QLGLGVSPGYQTFVSCQQQQLSFLPPPWGDC------SSASLNPNY 291
Query: 315 HSRPARSL-QPQVTWQPPLLL 334
P+ L P + PP L
Sbjct: 292 EPEPSDPLGSPSPSPSPPYTL 312
>gi|9998948 amiloride-sensitive cation channel 3 isoform c [Homo
sapiens]
Length = 543
Score = 30.4 bits (67), Expect = 2.3
Identities = 24/81 (29%), Positives = 36/81 (44%), Gaps = 10/81 (12%)
Query: 255 VHRRVQYPLVDTQPQLCLKFSTSWGSWVRCPFEQRRFPTPPTSRCTCVTGGSHSSLPANA 314
+H + + P++D QL L S + ++V C +Q F PP C S +SL N
Sbjct: 241 IHSQEEPPIID---QLGLGVSPGYQTFVSCQQQQLSFLPPPWGDC------SSASLNPNY 291
Query: 315 HSRPARSL-QPQVTWQPPLLL 334
P+ L P + PP L
Sbjct: 292 EPEPSDPLGSPSPSPSPPYTL 312
>gi|239735488 v-myb myeloblastosis viral oncogene homolog isoform 4
[Homo sapiens]
Length = 758
Score = 30.0 bits (66), Expect = 3.0
Identities = 34/127 (26%), Positives = 52/127 (40%), Gaps = 13/127 (10%)
Query: 210 DTVYYH-PESQTLSWEPACPVSGHVSLCWRPGPGAGC--RKLQQSSQLVHRRV---QYPL 263
D YYH E+Q +S PV+ HV++ P P A R +R+ + L
Sbjct: 243 DYSYYHISEAQNVSSHVPYPVALHVNIVNVPQPAAAAIQRHYNDEDPEKEKRIKELELLL 302
Query: 264 VDTQPQL----CLKFSTSWGSWVRCPFEQRRFPTPPTSRCTCVTGGSHS--SLPANAHSR 317
+ T+ +L + S+ W P ++ +C+ G HS SLPA+ S
Sbjct: 303 MSTENELKGQQTQNHTCSYPGWHSTTIADHTRPHGDSAPVSCL-GEHHSTPSLPADPGSL 361
Query: 318 PARSLQP 324
P S P
Sbjct: 362 PEESASP 368
>gi|194328727 v-myb myeloblastosis viral oncogene homolog isoform 3
[Homo sapiens]
Length = 637
Score = 30.0 bits (66), Expect = 3.0
Identities = 34/127 (26%), Positives = 52/127 (40%), Gaps = 13/127 (10%)
Query: 210 DTVYYH-PESQTLSWEPACPVSGHVSLCWRPGPGAGC--RKLQQSSQLVHRRV---QYPL 263
D YYH E+Q +S PV+ HV++ P P A R +R+ + L
Sbjct: 243 DYSYYHISEAQNVSSHVPYPVALHVNIVNVPQPAAAAIQRHYNDEDPEKEKRIKELELLL 302
Query: 264 VDTQPQL----CLKFSTSWGSWVRCPFEQRRFPTPPTSRCTCVTGGSHS--SLPANAHSR 317
+ T+ +L + S+ W P ++ +C+ G HS SLPA+ S
Sbjct: 303 MSTENELKGQQTQNHTCSYPGWHSTTIADHTRPHGDSAPVSCL-GEHHSTPSLPADPGSL 361
Query: 318 PARSLQP 324
P S P
Sbjct: 362 PEESASP 368
>gi|239743293 PREDICTED: mucin 12 [Homo sapiens]
Length = 5478
Score = 30.0 bits (66), Expect = 3.0
Identities = 38/136 (27%), Positives = 46/136 (33%), Gaps = 23/136 (16%)
Query: 187 TPDAVRIQICPFENDTEALEVLWDTVYYHPESQTLSWEPACPVS---GHVSLCWRPGPGA 243
+P + I P T L T Y P S T + PA S G S R PG+
Sbjct: 1222 SPGSTEITTLPGSTTTPGLSEASTTFYSSPRSPTTTLSPASMTSLGVGEESTTSRSQPGS 1281
Query: 244 GCRKLQQSSQLVHRRVQYPLVDTQPQLCLKFSTSWGSWVRCPFEQRRFPTPPTSRCTCVT 303
H V P T P L + +T + S R E FP T+
Sbjct: 1282 -----------THSTVS-PASTTTPGLSEESTTVYSS-SRGSTETTVFPHSTTT------ 1322
Query: 304 GGSHSSLPANAHSRPA 319
H P HSRPA
Sbjct: 1323 -SVHGEEPTTFHSRPA 1337
Score = 29.6 bits (65), Expect = 4.0
Identities = 40/136 (29%), Positives = 47/136 (34%), Gaps = 23/136 (16%)
Query: 187 TPDAVRIQICPFENDTEALEVLWDTVYYHPESQTLSWEPACPVS---GHVSLCWRPGPGA 243
+P + I P T L T Y P S T + PA S G S R PG+
Sbjct: 2305 SPGSTEITTLPGSTTTPGLSEASTTFYSSPRSPTTTLSPASMTSLGVGEESTTSRSQPGS 2364
Query: 244 GCRKLQQSSQLVHRRVQYPLVDTQPQLCLKFSTSWGSWVRCPFEQRRFPTPPTSRCTCVT 303
H V P T P L + +T + S E FP PT T V
Sbjct: 2365 -----------THSTVS-PASTTTPGLSEESTTVYSSSPGST-ETTVFPRTPT---TSVR 2408
Query: 304 GGSHSSLPANAHSRPA 319
G P HSRPA
Sbjct: 2409 GEE----PTTFHSRPA 2420
>gi|239508976 PREDICTED: mucin 12, cell surface associated [Homo
sapiens]
Length = 2036
Score = 30.0 bits (66), Expect = 3.0
Identities = 38/136 (27%), Positives = 46/136 (33%), Gaps = 23/136 (16%)
Query: 187 TPDAVRIQICPFENDTEALEVLWDTVYYHPESQTLSWEPACPVS---GHVSLCWRPGPGA 243
+P + I P T L T Y P S T + PA S G S R PG+
Sbjct: 709 SPGSTEITTLPGSTTTPGLSEASTTFYSSPRSPTTTLSPASMTSLGVGEESTTSRSQPGS 768
Query: 244 GCRKLQQSSQLVHRRVQYPLVDTQPQLCLKFSTSWGSWVRCPFEQRRFPTPPTSRCTCVT 303
H V P T P L + +T + S R E FP T+
Sbjct: 769 -----------THSTVS-PASTTTPGLSEESTTVYSS-SRGSTETTVFPHSTTT------ 809
Query: 304 GGSHSSLPANAHSRPA 319
H P HSRPA
Sbjct: 810 -SVHGEEPTTFHSRPA 824
>gi|239735496 v-myb myeloblastosis viral oncogene homolog isoform 8
[Homo sapiens]
Length = 605
Score = 29.6 bits (65), Expect = 4.0
Identities = 32/118 (27%), Positives = 44/118 (37%), Gaps = 27/118 (22%)
Query: 210 DTVYYH-PESQTLSWEPACPVSGHVSLCWRPGPGAGCRKLQQSSQLVHRRVQYPLVDTQP 268
D YYH E+Q +S PV+ HV++ P P A + TQ
Sbjct: 243 DYSYYHISEAQNVSSHVPYPVALHVNIVNVPQPAAAA------------------IQTQN 284
Query: 269 QLCLKFSTSWGSWVRCPFEQRRFPTPPTSRCTCVTGGSHS--SLPANAHSRPARSLQP 324
C S+ W P ++ +C+ G HS SLPA+ S P S P
Sbjct: 285 HTC-----SYPGWHSTTIADHTRPHGDSAPVSCL-GEHHSTPSLPADPGSLPEESASP 336
>gi|4506309 protein tyrosine phosphatase, receptor type, D isoform 1
precursor [Homo sapiens]
Length = 1912
Score = 29.3 bits (64), Expect = 5.2
Identities = 11/26 (42%), Positives = 15/26 (57%)
Query: 308 SSLPANAHSRPARSLQPQVTWQPPLL 333
+ P N HS S Q++WQPP+L
Sbjct: 919 TGFPQNLHSEGTTSTSVQLSWQPPVL 944
>gi|18860890 protein tyrosine phosphatase, receptor type, D isoform
2 precursor [Homo sapiens]
Length = 1899
Score = 29.3 bits (64), Expect = 5.2
Identities = 11/26 (42%), Positives = 15/26 (57%)
Query: 308 SSLPANAHSRPARSLQPQVTWQPPLL 333
+ P N HS S Q++WQPP+L
Sbjct: 906 TGFPQNLHSEGTTSTSVQLSWQPPVL 931
>gi|18860892 protein tyrosine phosphatase, receptor type, D isoform
3 precursor [Homo sapiens]
Length = 1903
Score = 29.3 bits (64), Expect = 5.2
Identities = 11/26 (42%), Positives = 15/26 (57%)
Query: 308 SSLPANAHSRPARSLQPQVTWQPPLL 333
+ P N HS S Q++WQPP+L
Sbjct: 910 TGFPQNLHSEGTTSTSVQLSWQPPVL 935
>gi|239735494 v-myb myeloblastosis viral oncogene homolog isoform 7
[Homo sapiens]
Length = 603
Score = 28.9 bits (63), Expect = 6.8
Identities = 34/130 (26%), Positives = 52/130 (40%), Gaps = 16/130 (12%)
Query: 210 DTVYYH-PESQTLSWEPACPVSGHVSLCWRPGPGAGC--RKLQQSSQLVHRRV---QYPL 263
D YYH E+Q +S PV+ HV++ P P A R +R+ + L
Sbjct: 243 DYSYYHISEAQNVSSHVPYPVALHVNIVNVPQPAAAAIQRHYNDEDPEKEKRIKELELLL 302
Query: 264 VDTQPQL-------CLKFSTSWGSWVRCPFEQRRFPTPPTSRCTCVTGGSHS--SLPANA 314
+ T+ +L + S+ W P ++ +C+ G HS SLPA+
Sbjct: 303 MSTENELKGQQVLPTQNHTCSYPGWHSTTIADHTRPHGDSAPVSCL-GEHHSTPSLPADP 361
Query: 315 HSRPARSLQP 324
S P S P
Sbjct: 362 GSLPEESASP 371
>gi|239735492 v-myb myeloblastosis viral oncogene homolog isoform 6
[Homo sapiens]
Length = 745
Score = 28.9 bits (63), Expect = 6.8
Identities = 34/130 (26%), Positives = 52/130 (40%), Gaps = 16/130 (12%)
Query: 210 DTVYYH-PESQTLSWEPACPVSGHVSLCWRPGPGAGC--RKLQQSSQLVHRRV---QYPL 263
D YYH E+Q +S PV+ HV++ P P A R +R+ + L
Sbjct: 243 DYSYYHISEAQNVSSHVPYPVALHVNIVNVPQPAAAAIQRHYNDEDPEKEKRIKELELLL 302
Query: 264 VDTQPQL-------CLKFSTSWGSWVRCPFEQRRFPTPPTSRCTCVTGGSHS--SLPANA 314
+ T+ +L + S+ W P ++ +C+ G HS SLPA+
Sbjct: 303 MSTENELKGQQVLPTQNHTCSYPGWHSTTIADHTRPHGDSAPVSCL-GEHHSTPSLPADP 361
Query: 315 HSRPARSLQP 324
S P S P
Sbjct: 362 GSLPEESASP 371
>gi|46361980 v-myb myeloblastosis viral oncogene homolog isoform 2
[Homo sapiens]
Length = 640
Score = 28.9 bits (63), Expect = 6.8
Identities = 34/130 (26%), Positives = 52/130 (40%), Gaps = 16/130 (12%)
Query: 210 DTVYYH-PESQTLSWEPACPVSGHVSLCWRPGPGAGC--RKLQQSSQLVHRRV---QYPL 263
D YYH E+Q +S PV+ HV++ P P A R +R+ + L
Sbjct: 243 DYSYYHISEAQNVSSHVPYPVALHVNIVNVPQPAAAAIQRHYNDEDPEKEKRIKELELLL 302
Query: 264 VDTQPQL-------CLKFSTSWGSWVRCPFEQRRFPTPPTSRCTCVTGGSHS--SLPANA 314
+ T+ +L + S+ W P ++ +C+ G HS SLPA+
Sbjct: 303 MSTENELKGQQVLPTQNHTCSYPGWHSTTIADHTRPHGDSAPVSCL-GEHHSTPSLPADP 361
Query: 315 HSRPARSLQP 324
S P S P
Sbjct: 362 GSLPEESASP 371
>gi|194328729 v-myb myeloblastosis viral oncogene homolog isoform 1
[Homo sapiens]
Length = 761
Score = 28.9 bits (63), Expect = 6.8
Identities = 34/130 (26%), Positives = 52/130 (40%), Gaps = 16/130 (12%)
Query: 210 DTVYYH-PESQTLSWEPACPVSGHVSLCWRPGPGAGC--RKLQQSSQLVHRRV---QYPL 263
D YYH E+Q +S PV+ HV++ P P A R +R+ + L
Sbjct: 243 DYSYYHISEAQNVSSHVPYPVALHVNIVNVPQPAAAAIQRHYNDEDPEKEKRIKELELLL 302
Query: 264 VDTQPQL-------CLKFSTSWGSWVRCPFEQRRFPTPPTSRCTCVTGGSHS--SLPANA 314
+ T+ +L + S+ W P ++ +C+ G HS SLPA+
Sbjct: 303 MSTENELKGQQVLPTQNHTCSYPGWHSTTIADHTRPHGDSAPVSCL-GEHHSTPSLPADP 361
Query: 315 HSRPARSLQP 324
S P S P
Sbjct: 362 GSLPEESASP 371
>gi|116256340 SEC31 homolog A isoform 3 [Homo sapiens]
Length = 1205
Score = 28.5 bits (62), Expect = 8.9
Identities = 13/41 (31%), Positives = 21/41 (51%)
Query: 291 FPTPPTSRCTCVTGGSHSSLPANAHSRPARSLQPQVTWQPP 331
FP PP+S + GG + ++A++ P + PQ W P
Sbjct: 943 FPPPPSSGASFQHGGPGAPPSSSAYALPPGTTGPQNGWNDP 983
>gi|215820652 StAR-related lipid transfer (START) domain containing
8 isoform b [Homo sapiens]
Length = 1023
Score = 28.5 bits (62), Expect = 8.9
Identities = 12/27 (44%), Positives = 15/27 (55%)
Query: 219 QTLSWEPACPVSGHVSLCWRPGPGAGC 245
++LS E CP GH W+PG GC
Sbjct: 232 RSLSIESLCPEDGHRLADWQPGRRWGC 258
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.322 0.133 0.438
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,907,546
Number of Sequences: 37866
Number of extensions: 694571
Number of successful extensions: 1784
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 19
Number of HSP's that attempted gapping in prelim test: 1750
Number of HSP's gapped (non-prelim): 46
length of query: 336
length of database: 18,247,518
effective HSP length: 103
effective length of query: 233
effective length of database: 14,347,320
effective search space: 3342925560
effective search space used: 3342925560
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.