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Search of human proteins with 187761307
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|187761307 heme oxygenase (decyclizing) 2 [Homo sapiens]
(316 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|187761311 heme oxygenase (decyclizing) 2 [Homo sapiens] 634 0.0
gi|187761309 heme oxygenase (decyclizing) 2 [Homo sapiens] 634 0.0
gi|187761307 heme oxygenase (decyclizing) 2 [Homo sapiens] 634 0.0
gi|8051608 heme oxygenase (decyclizing) 2 [Homo sapiens] 634 0.0
gi|4504437 heme oxygenase (decyclizing) 1 [Homo sapiens] 255 3e-68
gi|148612821 tetratricopeptide repeat domain 29 [Homo sapiens] 34 0.19
gi|221316624 dystonin isoform 4 [Homo sapiens] 33 0.33
gi|221316622 dystonin isoform 3 [Homo sapiens] 33 0.33
gi|221316618 dystonin isoform 2 [Homo sapiens] 33 0.33
gi|34577047 dystonin isoform 1 [Homo sapiens] 33 0.33
gi|34577049 dystonin isoform 1eA precursor [Homo sapiens] 33 0.33
gi|237858621 polyamine modulated factor 1 binding protein 1 isof... 32 0.74
gi|237858619 polyamine modulated factor 1 binding protein 1 isof... 32 0.74
gi|213688415 coiled-coil domain containing 66 isoform 1 [Homo sa... 32 0.96
gi|213688413 coiled-coil domain containing 66 isoform 2 [Homo sa... 32 0.96
gi|61102725 la related protein isoform 2 [Homo sapiens] 31 1.6
gi|39725634 la related protein isoform 1 [Homo sapiens] 31 1.6
gi|119703749 hydrocephalus inducing isoform a [Homo sapiens] 30 2.1
gi|6679074 nucleoporin like 2 [Homo sapiens] 30 2.8
gi|110618244 retinoblastoma binding protein 2 isoform 1 [Homo sa... 29 6.2
gi|110618242 retinoblastoma binding protein 2 isoform 2 [Homo sa... 29 6.2
gi|70980531 GGA binding partner [Homo sapiens] 29 6.2
gi|21735569 claspin [Homo sapiens] 28 8.2
>gi|187761311 heme oxygenase (decyclizing) 2 [Homo sapiens]
Length = 316
Score = 634 bits (1636), Expect = 0.0
Identities = 316/316 (100%), Positives = 316/316 (100%)
Query: 1 MSAEVETSEGVDESEKKNSGALEKENQMRMADLSELLKEGTKEAHDRAENTQFVKDFLKG 60
MSAEVETSEGVDESEKKNSGALEKENQMRMADLSELLKEGTKEAHDRAENTQFVKDFLKG
Sbjct: 1 MSAEVETSEGVDESEKKNSGALEKENQMRMADLSELLKEGTKEAHDRAENTQFVKDFLKG 60
Query: 61 NIKKELFKLATTALYFTYSALEEEMERNKDHPAFAPLYFPMELHRKEALTKDMEYFFGEN 120
NIKKELFKLATTALYFTYSALEEEMERNKDHPAFAPLYFPMELHRKEALTKDMEYFFGEN
Sbjct: 61 NIKKELFKLATTALYFTYSALEEEMERNKDHPAFAPLYFPMELHRKEALTKDMEYFFGEN 120
Query: 121 WEEQVQCPKAAQKYVERIHYIGQNEPELLVAHAYTRYMGDLSGGQVLKKVAQRALKLPST 180
WEEQVQCPKAAQKYVERIHYIGQNEPELLVAHAYTRYMGDLSGGQVLKKVAQRALKLPST
Sbjct: 121 WEEQVQCPKAAQKYVERIHYIGQNEPELLVAHAYTRYMGDLSGGQVLKKVAQRALKLPST 180
Query: 181 GEGTQFYLFENVDNAQQFKQLYRARMNALDLNMKTKERIVEEANKAFEYNMQIFNELDQA 240
GEGTQFYLFENVDNAQQFKQLYRARMNALDLNMKTKERIVEEANKAFEYNMQIFNELDQA
Sbjct: 181 GEGTQFYLFENVDNAQQFKQLYRARMNALDLNMKTKERIVEEANKAFEYNMQIFNELDQA 240
Query: 241 GSTLARETLEDGFPVHDGKGDMRKCPFYAAEQDKGALEGSSCPFRTAMAVLRKPSLQFIL 300
GSTLARETLEDGFPVHDGKGDMRKCPFYAAEQDKGALEGSSCPFRTAMAVLRKPSLQFIL
Sbjct: 241 GSTLARETLEDGFPVHDGKGDMRKCPFYAAEQDKGALEGSSCPFRTAMAVLRKPSLQFIL 300
Query: 301 AAGVALAAGLLAWYYM 316
AAGVALAAGLLAWYYM
Sbjct: 301 AAGVALAAGLLAWYYM 316
>gi|187761309 heme oxygenase (decyclizing) 2 [Homo sapiens]
Length = 316
Score = 634 bits (1636), Expect = 0.0
Identities = 316/316 (100%), Positives = 316/316 (100%)
Query: 1 MSAEVETSEGVDESEKKNSGALEKENQMRMADLSELLKEGTKEAHDRAENTQFVKDFLKG 60
MSAEVETSEGVDESEKKNSGALEKENQMRMADLSELLKEGTKEAHDRAENTQFVKDFLKG
Sbjct: 1 MSAEVETSEGVDESEKKNSGALEKENQMRMADLSELLKEGTKEAHDRAENTQFVKDFLKG 60
Query: 61 NIKKELFKLATTALYFTYSALEEEMERNKDHPAFAPLYFPMELHRKEALTKDMEYFFGEN 120
NIKKELFKLATTALYFTYSALEEEMERNKDHPAFAPLYFPMELHRKEALTKDMEYFFGEN
Sbjct: 61 NIKKELFKLATTALYFTYSALEEEMERNKDHPAFAPLYFPMELHRKEALTKDMEYFFGEN 120
Query: 121 WEEQVQCPKAAQKYVERIHYIGQNEPELLVAHAYTRYMGDLSGGQVLKKVAQRALKLPST 180
WEEQVQCPKAAQKYVERIHYIGQNEPELLVAHAYTRYMGDLSGGQVLKKVAQRALKLPST
Sbjct: 121 WEEQVQCPKAAQKYVERIHYIGQNEPELLVAHAYTRYMGDLSGGQVLKKVAQRALKLPST 180
Query: 181 GEGTQFYLFENVDNAQQFKQLYRARMNALDLNMKTKERIVEEANKAFEYNMQIFNELDQA 240
GEGTQFYLFENVDNAQQFKQLYRARMNALDLNMKTKERIVEEANKAFEYNMQIFNELDQA
Sbjct: 181 GEGTQFYLFENVDNAQQFKQLYRARMNALDLNMKTKERIVEEANKAFEYNMQIFNELDQA 240
Query: 241 GSTLARETLEDGFPVHDGKGDMRKCPFYAAEQDKGALEGSSCPFRTAMAVLRKPSLQFIL 300
GSTLARETLEDGFPVHDGKGDMRKCPFYAAEQDKGALEGSSCPFRTAMAVLRKPSLQFIL
Sbjct: 241 GSTLARETLEDGFPVHDGKGDMRKCPFYAAEQDKGALEGSSCPFRTAMAVLRKPSLQFIL 300
Query: 301 AAGVALAAGLLAWYYM 316
AAGVALAAGLLAWYYM
Sbjct: 301 AAGVALAAGLLAWYYM 316
>gi|187761307 heme oxygenase (decyclizing) 2 [Homo sapiens]
Length = 316
Score = 634 bits (1636), Expect = 0.0
Identities = 316/316 (100%), Positives = 316/316 (100%)
Query: 1 MSAEVETSEGVDESEKKNSGALEKENQMRMADLSELLKEGTKEAHDRAENTQFVKDFLKG 60
MSAEVETSEGVDESEKKNSGALEKENQMRMADLSELLKEGTKEAHDRAENTQFVKDFLKG
Sbjct: 1 MSAEVETSEGVDESEKKNSGALEKENQMRMADLSELLKEGTKEAHDRAENTQFVKDFLKG 60
Query: 61 NIKKELFKLATTALYFTYSALEEEMERNKDHPAFAPLYFPMELHRKEALTKDMEYFFGEN 120
NIKKELFKLATTALYFTYSALEEEMERNKDHPAFAPLYFPMELHRKEALTKDMEYFFGEN
Sbjct: 61 NIKKELFKLATTALYFTYSALEEEMERNKDHPAFAPLYFPMELHRKEALTKDMEYFFGEN 120
Query: 121 WEEQVQCPKAAQKYVERIHYIGQNEPELLVAHAYTRYMGDLSGGQVLKKVAQRALKLPST 180
WEEQVQCPKAAQKYVERIHYIGQNEPELLVAHAYTRYMGDLSGGQVLKKVAQRALKLPST
Sbjct: 121 WEEQVQCPKAAQKYVERIHYIGQNEPELLVAHAYTRYMGDLSGGQVLKKVAQRALKLPST 180
Query: 181 GEGTQFYLFENVDNAQQFKQLYRARMNALDLNMKTKERIVEEANKAFEYNMQIFNELDQA 240
GEGTQFYLFENVDNAQQFKQLYRARMNALDLNMKTKERIVEEANKAFEYNMQIFNELDQA
Sbjct: 181 GEGTQFYLFENVDNAQQFKQLYRARMNALDLNMKTKERIVEEANKAFEYNMQIFNELDQA 240
Query: 241 GSTLARETLEDGFPVHDGKGDMRKCPFYAAEQDKGALEGSSCPFRTAMAVLRKPSLQFIL 300
GSTLARETLEDGFPVHDGKGDMRKCPFYAAEQDKGALEGSSCPFRTAMAVLRKPSLQFIL
Sbjct: 241 GSTLARETLEDGFPVHDGKGDMRKCPFYAAEQDKGALEGSSCPFRTAMAVLRKPSLQFIL 300
Query: 301 AAGVALAAGLLAWYYM 316
AAGVALAAGLLAWYYM
Sbjct: 301 AAGVALAAGLLAWYYM 316
>gi|8051608 heme oxygenase (decyclizing) 2 [Homo sapiens]
Length = 316
Score = 634 bits (1636), Expect = 0.0
Identities = 316/316 (100%), Positives = 316/316 (100%)
Query: 1 MSAEVETSEGVDESEKKNSGALEKENQMRMADLSELLKEGTKEAHDRAENTQFVKDFLKG 60
MSAEVETSEGVDESEKKNSGALEKENQMRMADLSELLKEGTKEAHDRAENTQFVKDFLKG
Sbjct: 1 MSAEVETSEGVDESEKKNSGALEKENQMRMADLSELLKEGTKEAHDRAENTQFVKDFLKG 60
Query: 61 NIKKELFKLATTALYFTYSALEEEMERNKDHPAFAPLYFPMELHRKEALTKDMEYFFGEN 120
NIKKELFKLATTALYFTYSALEEEMERNKDHPAFAPLYFPMELHRKEALTKDMEYFFGEN
Sbjct: 61 NIKKELFKLATTALYFTYSALEEEMERNKDHPAFAPLYFPMELHRKEALTKDMEYFFGEN 120
Query: 121 WEEQVQCPKAAQKYVERIHYIGQNEPELLVAHAYTRYMGDLSGGQVLKKVAQRALKLPST 180
WEEQVQCPKAAQKYVERIHYIGQNEPELLVAHAYTRYMGDLSGGQVLKKVAQRALKLPST
Sbjct: 121 WEEQVQCPKAAQKYVERIHYIGQNEPELLVAHAYTRYMGDLSGGQVLKKVAQRALKLPST 180
Query: 181 GEGTQFYLFENVDNAQQFKQLYRARMNALDLNMKTKERIVEEANKAFEYNMQIFNELDQA 240
GEGTQFYLFENVDNAQQFKQLYRARMNALDLNMKTKERIVEEANKAFEYNMQIFNELDQA
Sbjct: 181 GEGTQFYLFENVDNAQQFKQLYRARMNALDLNMKTKERIVEEANKAFEYNMQIFNELDQA 240
Query: 241 GSTLARETLEDGFPVHDGKGDMRKCPFYAAEQDKGALEGSSCPFRTAMAVLRKPSLQFIL 300
GSTLARETLEDGFPVHDGKGDMRKCPFYAAEQDKGALEGSSCPFRTAMAVLRKPSLQFIL
Sbjct: 241 GSTLARETLEDGFPVHDGKGDMRKCPFYAAEQDKGALEGSSCPFRTAMAVLRKPSLQFIL 300
Query: 301 AAGVALAAGLLAWYYM 316
AAGVALAAGLLAWYYM
Sbjct: 301 AAGVALAAGLLAWYYM 316
>gi|4504437 heme oxygenase (decyclizing) 1 [Homo sapiens]
Length = 288
Score = 255 bits (652), Expect = 3e-68
Identities = 117/208 (56%), Positives = 160/208 (76%)
Query: 32 DLSELLKEGTKEAHDRAENTQFVKDFLKGNIKKELFKLATTALYFTYSALEEEMERNKDH 91
DLSE LKE TKE H +AEN +F+++F KG + ++ FKL +LY Y ALEEE+ERNK+
Sbjct: 12 DLSEALKEATKEVHTQAENAEFMRNFQKGQVTRDGFKLVMASLYHIYVALEEEIERNKES 71
Query: 92 PAFAPLYFPMELHRKEALTKDMEYFFGENWEEQVQCPKAAQKYVERIHYIGQNEPELLVA 151
P FAP+YFP ELHRK AL +D+ +++G W+E + A Q+YV+R+H +G+ EPELLVA
Sbjct: 72 PVFAPVYFPEELHRKAALEQDLAFWYGPRWQEVIPYTPAMQRYVKRLHEVGRTEPELLVA 131
Query: 152 HAYTRYMGDLSGGQVLKKVAQRALKLPSTGEGTQFYLFENVDNAQQFKQLYRARMNALDL 211
HAYTRY+GDLSGGQVLKK+AQ+AL LPS+GEG F+ F N+ +A +FKQLYR+RMN+L++
Sbjct: 132 HAYTRYLGDLSGGQVLKKIAQKALDLPSSGEGLAFFTFPNIASATKFKQLYRSRMNSLEM 191
Query: 212 NMKTKERIVEEANKAFEYNMQIFNELDQ 239
++R++EEA AF N+Q+F EL +
Sbjct: 192 TPAVRQRVIEEAKTAFLLNIQLFEELQE 219
>gi|148612821 tetratricopeptide repeat domain 29 [Homo sapiens]
Length = 475
Score = 33.9 bits (76), Expect = 0.19
Identities = 63/255 (24%), Positives = 95/255 (37%), Gaps = 39/255 (15%)
Query: 16 KKNSGALEKENQMRMADLSELLKEGTKEAHDRAENTQFVKDFLKGNIKKE-----LFKLA 70
K + G E E M M LL E + + AE+ + +G I K+ L LA
Sbjct: 174 KIDCGKKEAEAHMHMG----LLYEEDGQLLEAAEHYEAFHQLTQGRIWKDETGRSLNLLA 229
Query: 71 TTALYFTYSALEEEMERNKDHPAFAPLYFPMELHRKEALTKDME----YFFGENWEEQVQ 126
+L TY L ++M NK++ + KE K ME Y+ G
Sbjct: 230 CESLLRTYRLLSDKMLENKEYKQAIKILIKASEIAKEGSDKKMEAEASYYLG-------L 282
Query: 127 CPKAAQKYVERIHYIGQNEPELLVAHAYTRYMGDLSGGQVLKKVAQRALK-LPSTGEGTQ 185
AA++Y E L V Y + DL L + + K L S GE T
Sbjct: 283 AHLAAEEY----------ETALTVLDTYCKISTDLDDDLSLGRGYEAIAKVLQSQGEMT- 331
Query: 186 FYLFENVDNAQQFKQLYRARMNALDLNMKTKERIVEEANKAFEYN--MQIFNELDQAGST 243
E + ++F ++ R +LDL ++ + + N+ YN + F +
Sbjct: 332 ----EAIKYLKKFVKIARNNFQSLDL-VRASTMLGDIYNEKGYYNKASECFQQAFDTTVE 386
Query: 244 LARETLEDGFPVHDG 258
L L D VH G
Sbjct: 387 LMSMPLMDETKVHYG 401
>gi|221316624 dystonin isoform 4 [Homo sapiens]
Length = 5526
Score = 33.1 bits (74), Expect = 0.33
Identities = 58/256 (22%), Positives = 103/256 (40%), Gaps = 15/256 (5%)
Query: 5 VETSEGVDESEKKNSGALEKENQMRMADLSELLKEGTKEAHDRAENTQFVKDFLKGNIKK 64
+E E E EKK KE Q ++++S+ LK+ K + + + + KK
Sbjct: 1457 LEEEEKSLEEEKKEHVEKAKELQKWVSNISKTLKDAEKAGKPPFSKQKISSEEI--STKK 1514
Query: 65 ELFKLATTALYFTYSALEEEM---ERNKDHPAFAPLYFPMELHRKEALTKDME-YFFGEN 120
E A + + ++M ERN+ L L E+L + E G+
Sbjct: 1515 EQLSEALQTIQLFLAKHGDKMTDEERNELEKQVKTLQESYNLLFSESLKQLQESQTSGDV 1574
Query: 121 WEEQVQCPKAAQKYVERIHYIGQ---NEPELLVAHAYTRYMGDLSGGQVLKKVAQRALKL 177
E+ + Q+Y E++ I L+ H +GD G LKK + +L
Sbjct: 1575 KVEEKIVAERQQEYKEKLQGICDLLTQTENRLIGHQEAFMIGD--GTVELKKYQSKQEEL 1632
Query: 178 PSTGEGTQFYLFENVDNAQQFKQLYRARMNALDLNMKTKERIVEEANKAFEYNM---QIF 234
+G+ L E V N + F + +++ D + ++++ E K + N+ Q
Sbjct: 1633 QKDMQGSAQALAEVVKNTENFLKENGEKLSQEDKAL-IEQKLNEAKIKCEQLNLKAEQSK 1691
Query: 235 NELDQAGSTLARETLE 250
ELD+ +T +E E
Sbjct: 1692 KELDKVVTTAIKEETE 1707
>gi|221316622 dystonin isoform 3 [Homo sapiens]
Length = 5537
Score = 33.1 bits (74), Expect = 0.33
Identities = 58/256 (22%), Positives = 103/256 (40%), Gaps = 15/256 (5%)
Query: 5 VETSEGVDESEKKNSGALEKENQMRMADLSELLKEGTKEAHDRAENTQFVKDFLKGNIKK 64
+E E E EKK KE Q ++++S+ LK+ K + + + + KK
Sbjct: 1468 LEEEEKSLEEEKKEHVEKAKELQKWVSNISKTLKDAEKAGKPPFSKQKISSEEI--STKK 1525
Query: 65 ELFKLATTALYFTYSALEEEM---ERNKDHPAFAPLYFPMELHRKEALTKDME-YFFGEN 120
E A + + ++M ERN+ L L E+L + E G+
Sbjct: 1526 EQLSEALQTIQLFLAKHGDKMTDEERNELEKQVKTLQESYNLLFSESLKQLQESQTSGDV 1585
Query: 121 WEEQVQCPKAAQKYVERIHYIGQ---NEPELLVAHAYTRYMGDLSGGQVLKKVAQRALKL 177
E+ + Q+Y E++ I L+ H +GD G LKK + +L
Sbjct: 1586 KVEEKIVAERQQEYKEKLQGICDLLTQTENRLIGHQEAFMIGD--GTVELKKYQSKQEEL 1643
Query: 178 PSTGEGTQFYLFENVDNAQQFKQLYRARMNALDLNMKTKERIVEEANKAFEYNM---QIF 234
+G+ L E V N + F + +++ D + ++++ E K + N+ Q
Sbjct: 1644 QKDMQGSAQALAEVVKNTENFLKENGEKLSQEDKAL-IEQKLNEAKIKCEQLNLKAEQSK 1702
Query: 235 NELDQAGSTLARETLE 250
ELD+ +T +E E
Sbjct: 1703 KELDKVVTTAIKEETE 1718
>gi|221316618 dystonin isoform 2 [Homo sapiens]
Length = 5675
Score = 33.1 bits (74), Expect = 0.33
Identities = 58/256 (22%), Positives = 103/256 (40%), Gaps = 15/256 (5%)
Query: 5 VETSEGVDESEKKNSGALEKENQMRMADLSELLKEGTKEAHDRAENTQFVKDFLKGNIKK 64
+E E E EKK KE Q ++++S+ LK+ K + + + + KK
Sbjct: 1606 LEEEEKSLEEEKKEHVEKAKELQKWVSNISKTLKDAEKAGKPPFSKQKISSEEI--STKK 1663
Query: 65 ELFKLATTALYFTYSALEEEM---ERNKDHPAFAPLYFPMELHRKEALTKDME-YFFGEN 120
E A + + ++M ERN+ L L E+L + E G+
Sbjct: 1664 EQLSEALQTIQLFLAKHGDKMTDEERNELEKQVKTLQESYNLLFSESLKQLQESQTSGDV 1723
Query: 121 WEEQVQCPKAAQKYVERIHYIGQ---NEPELLVAHAYTRYMGDLSGGQVLKKVAQRALKL 177
E+ + Q+Y E++ I L+ H +GD G LKK + +L
Sbjct: 1724 KVEEKIVAERQQEYKEKLQGICDLLTQTENRLIGHQEAFMIGD--GTVELKKYQSKQEEL 1781
Query: 178 PSTGEGTQFYLFENVDNAQQFKQLYRARMNALDLNMKTKERIVEEANKAFEYNM---QIF 234
+G+ L E V N + F + +++ D + ++++ E K + N+ Q
Sbjct: 1782 QKDMQGSAQALAEVVKNTENFLKENGEKLSQEDKAL-IEQKLNEAKIKCEQLNLKAEQSK 1840
Query: 235 NELDQAGSTLARETLE 250
ELD+ +T +E E
Sbjct: 1841 KELDKVVTTAIKEETE 1856
>gi|34577047 dystonin isoform 1 [Homo sapiens]
Length = 5497
Score = 33.1 bits (74), Expect = 0.33
Identities = 58/256 (22%), Positives = 103/256 (40%), Gaps = 15/256 (5%)
Query: 5 VETSEGVDESEKKNSGALEKENQMRMADLSELLKEGTKEAHDRAENTQFVKDFLKGNIKK 64
+E E E EKK KE Q ++++S+ LK+ K + + + + KK
Sbjct: 1428 LEEEEKSLEEEKKEHVEKAKELQKWVSNISKTLKDAEKAGKPPFSKQKISSEEI--STKK 1485
Query: 65 ELFKLATTALYFTYSALEEEM---ERNKDHPAFAPLYFPMELHRKEALTKDME-YFFGEN 120
E A + + ++M ERN+ L L E+L + E G+
Sbjct: 1486 EQLSEALQTIQLFLAKHGDKMTDEERNELEKQVKTLQESYNLLFSESLKQLQESQTSGDV 1545
Query: 121 WEEQVQCPKAAQKYVERIHYIGQ---NEPELLVAHAYTRYMGDLSGGQVLKKVAQRALKL 177
E+ + Q+Y E++ I L+ H +GD G LKK + +L
Sbjct: 1546 KVEEKIVAERQQEYKEKLQGICDLLTQTENRLIGHQEAFMIGD--GTVELKKYQSKQEEL 1603
Query: 178 PSTGEGTQFYLFENVDNAQQFKQLYRARMNALDLNMKTKERIVEEANKAFEYNM---QIF 234
+G+ L E V N + F + +++ D + ++++ E K + N+ Q
Sbjct: 1604 QKDMQGSAQALAEVVKNTENFLKENGEKLSQEDKAL-IEQKLNEAKIKCEQLNLKAEQSK 1662
Query: 235 NELDQAGSTLARETLE 250
ELD+ +T +E E
Sbjct: 1663 KELDKVVTTAIKEETE 1678
>gi|34577049 dystonin isoform 1eA precursor [Homo sapiens]
Length = 5171
Score = 33.1 bits (74), Expect = 0.33
Identities = 58/256 (22%), Positives = 103/256 (40%), Gaps = 15/256 (5%)
Query: 5 VETSEGVDESEKKNSGALEKENQMRMADLSELLKEGTKEAHDRAENTQFVKDFLKGNIKK 64
+E E E EKK KE Q ++++S+ LK+ K + + + + KK
Sbjct: 1102 LEEEEKSLEEEKKEHVEKAKELQKWVSNISKTLKDAEKAGKPPFSKQKISSEEI--STKK 1159
Query: 65 ELFKLATTALYFTYSALEEEM---ERNKDHPAFAPLYFPMELHRKEALTKDME-YFFGEN 120
E A + + ++M ERN+ L L E+L + E G+
Sbjct: 1160 EQLSEALQTIQLFLAKHGDKMTDEERNELEKQVKTLQESYNLLFSESLKQLQESQTSGDV 1219
Query: 121 WEEQVQCPKAAQKYVERIHYIGQ---NEPELLVAHAYTRYMGDLSGGQVLKKVAQRALKL 177
E+ + Q+Y E++ I L+ H +GD G LKK + +L
Sbjct: 1220 KVEEKIVAERQQEYKEKLQGICDLLTQTENRLIGHQEAFMIGD--GTVELKKYQSKQEEL 1277
Query: 178 PSTGEGTQFYLFENVDNAQQFKQLYRARMNALDLNMKTKERIVEEANKAFEYNM---QIF 234
+G+ L E V N + F + +++ D + ++++ E K + N+ Q
Sbjct: 1278 QKDMQGSAQALAEVVKNTENFLKENGEKLSQEDKAL-IEQKLNEAKIKCEQLNLKAEQSK 1336
Query: 235 NELDQAGSTLARETLE 250
ELD+ +T +E E
Sbjct: 1337 KELDKVVTTAIKEETE 1352
>gi|237858621 polyamine modulated factor 1 binding protein 1 isoform
b [Homo sapiens]
Length = 882
Score = 32.0 bits (71), Expect = 0.74
Identities = 45/198 (22%), Positives = 85/198 (42%), Gaps = 32/198 (16%)
Query: 12 DESEKKNSGALEKENQMRMADL-----------------SELLKEGTKEAHDRAENTQFV 54
D++ K+NS LE+EN+ A+L +++++ KE + E+ +
Sbjct: 503 DKTLKENSRKLEEENENLRAELQCCSTQLESSLNKYNTSQQVIQDLNKEIALQKESLMSL 562
Query: 55 KDFLKGNIKKELFKLATTALYFTYSALEEEMERNKDHPAFAPLYFPMELHRKEALTKDME 114
+ L ++KE L TT Y AL + +D A +L+ + TK ++
Sbjct: 563 QAQLDKALQKEKHYLQTTITKEAYDALSRKSAACQDDLTQA----LEKLNHVTSETKSLQ 618
Query: 115 YFFGENWEEQVQCPKAAQKYVERIHYI--------GQNEPELLVAHAYTRYMGDLSGGQV 166
+ E++ Q + Y ER+ + G ++ L HA+ + + ++S QV
Sbjct: 619 QSLTQTQEKKAQLEEEIIAYEERMKKLNTELRKLRGFHQESELEVHAFDKKLEEMS-CQV 677
Query: 167 L--KKVAQRALKLPSTGE 182
L +K Q LK+ + E
Sbjct: 678 LQWQKQHQNDLKMLAAKE 695
>gi|237858619 polyamine modulated factor 1 binding protein 1 isoform
a [Homo sapiens]
Length = 1007
Score = 32.0 bits (71), Expect = 0.74
Identities = 45/198 (22%), Positives = 85/198 (42%), Gaps = 32/198 (16%)
Query: 12 DESEKKNSGALEKENQMRMADL-----------------SELLKEGTKEAHDRAENTQFV 54
D++ K+NS LE+EN+ A+L +++++ KE + E+ +
Sbjct: 648 DKTLKENSRKLEEENENLRAELQCCSTQLESSLNKYNTSQQVIQDLNKEIALQKESLMSL 707
Query: 55 KDFLKGNIKKELFKLATTALYFTYSALEEEMERNKDHPAFAPLYFPMELHRKEALTKDME 114
+ L ++KE L TT Y AL + +D A +L+ + TK ++
Sbjct: 708 QAQLDKALQKEKHYLQTTITKEAYDALSRKSAACQDDLTQA----LEKLNHVTSETKSLQ 763
Query: 115 YFFGENWEEQVQCPKAAQKYVERIHYI--------GQNEPELLVAHAYTRYMGDLSGGQV 166
+ E++ Q + Y ER+ + G ++ L HA+ + + ++S QV
Sbjct: 764 QSLTQTQEKKAQLEEEIIAYEERMKKLNTELRKLRGFHQESELEVHAFDKKLEEMS-CQV 822
Query: 167 L--KKVAQRALKLPSTGE 182
L +K Q LK+ + E
Sbjct: 823 LQWQKQHQNDLKMLAAKE 840
>gi|213688415 coiled-coil domain containing 66 isoform 1 [Homo
sapiens]
Length = 948
Score = 31.6 bits (70), Expect = 0.96
Identities = 22/89 (24%), Positives = 42/89 (47%), Gaps = 12/89 (13%)
Query: 1 MSAEVETSEGVDESEKKNSGALEKENQMRMADLSELLKEGTKEAHDRAENTQFVKDFLKG 60
++A+VE + E++ E+E ++R+A E +++ Q+ +D LK
Sbjct: 471 ITAQVEEKRRKKQLEEEQRKKEEQEEELRLAQEREEMQK------------QYEEDILKQ 518
Query: 61 NIKKELFKLATTALYFTYSALEEEMERNK 89
K+E+ L T L+ T +E +R K
Sbjct: 519 KQKEEIMTLKTNELFQTMQRAQELAQRLK 547
>gi|213688413 coiled-coil domain containing 66 isoform 2 [Homo
sapiens]
Length = 914
Score = 31.6 bits (70), Expect = 0.96
Identities = 22/89 (24%), Positives = 42/89 (47%), Gaps = 12/89 (13%)
Query: 1 MSAEVETSEGVDESEKKNSGALEKENQMRMADLSELLKEGTKEAHDRAENTQFVKDFLKG 60
++A+VE + E++ E+E ++R+A E +++ Q+ +D LK
Sbjct: 437 ITAQVEEKRRKKQLEEEQRKKEEQEEELRLAQEREEMQK------------QYEEDILKQ 484
Query: 61 NIKKELFKLATTALYFTYSALEEEMERNK 89
K+E+ L T L+ T +E +R K
Sbjct: 485 KQKEEIMTLKTNELFQTMQRAQELAQRLK 513
>gi|61102725 la related protein isoform 2 [Homo sapiens]
Length = 1096
Score = 30.8 bits (68), Expect = 1.6
Identities = 19/65 (29%), Positives = 30/65 (46%), Gaps = 8/65 (12%)
Query: 55 KDFLKGNIKKELFKLATTALYFTYSALEEE--MERNKDHPAFAPLYFPMELHRKEALTKD 112
++ LK IK+++ YF+ LE + + R D F P+ HR +ALT D
Sbjct: 400 QELLKDYIKRQI------EYYFSVDNLERDFFLRRKMDADGFLPITLIASFHRVQALTTD 453
Query: 113 MEYFF 117
+ F
Sbjct: 454 ISLIF 458
>gi|39725634 la related protein isoform 1 [Homo sapiens]
Length = 1019
Score = 30.8 bits (68), Expect = 1.6
Identities = 19/65 (29%), Positives = 30/65 (46%), Gaps = 8/65 (12%)
Query: 55 KDFLKGNIKKELFKLATTALYFTYSALEEE--MERNKDHPAFAPLYFPMELHRKEALTKD 112
++ LK IK+++ YF+ LE + + R D F P+ HR +ALT D
Sbjct: 323 QELLKDYIKRQI------EYYFSVDNLERDFFLRRKMDADGFLPITLIASFHRVQALTTD 376
Query: 113 MEYFF 117
+ F
Sbjct: 377 ISLIF 381
>gi|119703749 hydrocephalus inducing isoform a [Homo sapiens]
Length = 5120
Score = 30.4 bits (67), Expect = 2.1
Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 13/83 (15%)
Query: 12 DESEKKNSGALEKENQMRMADLSE----LLKEGTKEAHDRAENTQFVKDFLKGNIKKELF 67
++ E+K+ GALEKE + R+ ++ E L E K DR ++ L+ K+E
Sbjct: 2281 EQEERKHKGALEKEKE-RLQNMDEEEYDALTEEEKLTFDRG-----IQQALRERKKREQE 2334
Query: 68 KLATTALYFTYSALEEEMERNKD 90
+LA L++E+ER K+
Sbjct: 2335 RLAKE---MQEKKLQQELERQKE 2354
>gi|6679074 nucleoporin like 2 [Homo sapiens]
Length = 423
Score = 30.0 bits (66), Expect = 2.8
Identities = 44/209 (21%), Positives = 78/209 (37%), Gaps = 15/209 (7%)
Query: 87 RNKDHPAFAPLYFPMELHRKEALTKDMEYFFGENWEEQVQCPKAAQKYVERIHYIGQNEP 146
R+++ P F+ +RKE F + +EQ K + V+ + +
Sbjct: 73 RDQEKPYFSSFDSGASTNRKEGFGLSENPFASLSPDEQKDEKKLLEGIVKDMEVWESSGQ 132
Query: 147 ELLVAHAYTRYMGDLSGGQVLKKVAQRALKLPSTGEGTQFYLFENVDNAQQFKQLYRARM 206
+ ++ + ++SG ++ L+L T L +++ Q+ +R R+
Sbjct: 133 WMFSVYSPVKKKPNISG---FTDISPEELRLEYHNFLTSNNLQSYLNSVQRLINQWRNRV 189
Query: 207 NAL-DLNMKTKERIVEEANKAFEYNMQIFNELDQAGSTLARETLEDGFPVHDGKGD---- 261
N L LN+ TK ++ + F GS+ A + GFPV++ D
Sbjct: 190 NELKSLNISTKVALLSDVKDGVNQAAPAFG----FGSSQAATFMSPGFPVNNSSSDNAQN 245
Query: 262 ---MRKCPFYAAEQDKGALEGSSCPFRTA 287
F AA A GSS F A
Sbjct: 246 FSFKTNSGFAAASSGSPAGFGSSPAFGAA 274
>gi|110618244 retinoblastoma binding protein 2 isoform 1 [Homo
sapiens]
Length = 1690
Score = 28.9 bits (63), Expect = 6.2
Identities = 32/115 (27%), Positives = 50/115 (43%), Gaps = 16/115 (13%)
Query: 9 EGVDESEKKNSGALEKENQMRMADLSELLKEGTKEAHDRAENTQFVKDFLK--GNIKKEL 66
+G D SEKK LEK + +L EG +++ + + + K LK + KEL
Sbjct: 1497 KGKDSSEKKRKRKLEK--------VEQLFGEGKQKSKELKKMDKPRKKKLKLGADKSKEL 1548
Query: 67 FKLATTALYFTYSALEEEMERNKDHPAFAPLYFPMELHRKEALTKDMEYFFGENW 121
KLA A EEE ++ K+ A A + E K+ K ++ +W
Sbjct: 1549 NKLAKKL------AKEEERKKKKEKAAAAKVELVKESTEKKREKKVLDIPSKYDW 1597
>gi|110618242 retinoblastoma binding protein 2 isoform 2 [Homo
sapiens]
Length = 1641
Score = 28.9 bits (63), Expect = 6.2
Identities = 32/115 (27%), Positives = 50/115 (43%), Gaps = 16/115 (13%)
Query: 9 EGVDESEKKNSGALEKENQMRMADLSELLKEGTKEAHDRAENTQFVKDFLK--GNIKKEL 66
+G D SEKK LEK + +L EG +++ + + + K LK + KEL
Sbjct: 1502 KGKDSSEKKRKRKLEK--------VEQLFGEGKQKSKELKKMDKPRKKKLKLGADKSKEL 1553
Query: 67 FKLATTALYFTYSALEEEMERNKDHPAFAPLYFPMELHRKEALTKDMEYFFGENW 121
KLA A EEE ++ K+ A A + E K+ K ++ +W
Sbjct: 1554 NKLAKKL------AKEEERKKKKEKAAAAKVELVKESTEKKREKKVLDIPSKYDW 1602
>gi|70980531 GGA binding partner [Homo sapiens]
Length = 441
Score = 28.9 bits (63), Expect = 6.2
Identities = 22/81 (27%), Positives = 35/81 (43%), Gaps = 1/81 (1%)
Query: 11 VDESEKKNSGALEKENQMRMADLSELLKEGTKEAHDRA-ENTQFVKDFLKGNIKKELFKL 69
+ S K+ A+EK+ + + +E H R E K+ LK IK+ L +
Sbjct: 221 LQSSVKQQVEAIEKQYISAIEKQAHKCEELLNAQHQRLLEMLDTEKELLKEKIKEALIQQ 280
Query: 70 ATTALYFTYSALEEEMERNKD 90
+ LEEE +RNK+
Sbjct: 281 SQEQKEILEKCLEEERQRNKE 301
>gi|21735569 claspin [Homo sapiens]
Length = 1339
Score = 28.5 bits (62), Expect = 8.2
Identities = 19/55 (34%), Positives = 25/55 (45%), Gaps = 5/55 (9%)
Query: 4 EVETSEGVDESEKKNSGALEKENQMRMADLSELLKEGTKEAHDRAENTQFVKDFL 58
E E E DESE+ +EKE + EL +E KE + E Q +FL
Sbjct: 632 EEEEEEMTDESEEDGEEKVEKEEKE-----EELEEEEEKEEEEEEEGNQETAEFL 681
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.131 0.373
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,910,450
Number of Sequences: 37866
Number of extensions: 469463
Number of successful extensions: 1486
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 18
Number of HSP's that attempted gapping in prelim test: 1479
Number of HSP's gapped (non-prelim): 28
length of query: 316
length of database: 18,247,518
effective HSP length: 102
effective length of query: 214
effective length of database: 14,385,186
effective search space: 3078429804
effective search space used: 3078429804
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.