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Search of human proteins with 10092667
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|10092667 SERTA domain containing 4 [Homo sapiens]
(356 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|10092667 SERTA domain containing 4 [Homo sapiens] 741 0.0
gi|153792110 HEG homolog 1 [Homo sapiens] 42 8e-04
gi|18375613 dachshund homolog 1 isoform b [Homo sapiens] 39 0.009
gi|18375611 dachshund homolog 1 isoform a [Homo sapiens] 39 0.009
gi|18375609 dachshund homolog 1 isoform c [Homo sapiens] 39 0.009
gi|239750672 PREDICTED: hypothetical protein [Homo sapiens] 39 0.009
gi|239744982 PREDICTED: hypothetical protein [Homo sapiens] 39 0.009
gi|119395716 forkhead box C1 [Homo sapiens] 38 0.012
gi|192807286 zinc finger and BTB domain containing 4 [Homo sapiens] 38 0.016
gi|192807284 zinc finger and BTB domain containing 4 [Homo sapiens] 38 0.016
gi|55741677 SET domain containing 1A [Homo sapiens] 36 0.046
gi|51873049 hypothetical protein LOC8603 [Homo sapiens] 36 0.060
gi|239757409 PREDICTED: similar to zinc finger protein 208 [Homo... 35 0.10
gi|239746371 PREDICTED: similar to zinc finger protein 208 [Homo... 35 0.10
gi|12669915 E2F transcription factor 4 [Homo sapiens] 35 0.10
gi|38679909 testis expressed sequence 2 [Homo sapiens] 35 0.10
gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens] 35 0.13
gi|238624132 large conductance calcium-activated potassium chann... 34 0.18
gi|238624130 large conductance calcium-activated potassium chann... 34 0.18
gi|62388890 large conductance calcium-activated potassium channe... 34 0.18
gi|26638650 large conductance calcium-activated potassium channe... 34 0.18
gi|239756174 PREDICTED: hypothetical protein [Homo sapiens] 34 0.18
gi|58530863 melanoma antigen family A, 10 [Homo sapiens] 34 0.23
gi|10567820 melanoma antigen family A, 10 [Homo sapiens] 34 0.23
gi|167621456 kinase suppressor of ras 2 [Homo sapiens] 34 0.23
gi|242247193 SH2B adaptor protein 2 [Homo sapiens] 33 0.30
gi|239750235 PREDICTED: hypothetical protein [Homo sapiens] 33 0.30
gi|239744535 PREDICTED: hypothetical protein XP_002343184 [Homo ... 33 0.30
gi|163937854 ataxin 7-like 1 isoform 1 [Homo sapiens] 33 0.30
gi|211971080 ataxin 7-like 1 isoform 3 [Homo sapiens] 33 0.30
>gi|10092667 SERTA domain containing 4 [Homo sapiens]
Length = 356
Score = 741 bits (1912), Expect = 0.0
Identities = 356/356 (100%), Positives = 356/356 (100%)
Query: 1 MTLVLSMNRFCEPIVSEGAAEIAGYQTLWEADSYGGPSPPGPAQAPLQGDRGAGPPLAGS 60
MTLVLSMNRFCEPIVSEGAAEIAGYQTLWEADSYGGPSPPGPAQAPLQGDRGAGPPLAGS
Sbjct: 1 MTLVLSMNRFCEPIVSEGAAEIAGYQTLWEADSYGGPSPPGPAQAPLQGDRGAGPPLAGS 60
Query: 61 HYRGISNPITTSKITYFKRKYVEEEDFHPPLSSCSHKTISIFEERAHILYMSLEKLKFID 120
HYRGISNPITTSKITYFKRKYVEEEDFHPPLSSCSHKTISIFEERAHILYMSLEKLKFID
Sbjct: 61 HYRGISNPITTSKITYFKRKYVEEEDFHPPLSSCSHKTISIFEERAHILYMSLEKLKFID 120
Query: 121 DPEVYLRRSVLINNLMKRIHGEIIMQNNWCFPACSFNGTSAQEWFMAQDCPYRKRPRMAK 180
DPEVYLRRSVLINNLMKRIHGEIIMQNNWCFPACSFNGTSAQEWFMAQDCPYRKRPRMAK
Sbjct: 121 DPEVYLRRSVLINNLMKRIHGEIIMQNNWCFPACSFNGTSAQEWFMAQDCPYRKRPRMAK 180
Query: 181 EECEKFHACCFYQECGGHYLNLPLSVNANVGSASTAASSPSASSSSSSSSSSPPLPLPSC 240
EECEKFHACCFYQECGGHYLNLPLSVNANVGSASTAASSPSASSSSSSSSSSPPLPLPSC
Sbjct: 181 EECEKFHACCFYQECGGHYLNLPLSVNANVGSASTAASSPSASSSSSSSSSSPPLPLPSC 240
Query: 241 SRQVDFDVGSASIYKSDGQIPANEIFVTNVRSLGVQEKAKLNDEKANDDTNRDGGPLSHE 300
SRQVDFDVGSASIYKSDGQIPANEIFVTNVRSLGVQEKAKLNDEKANDDTNRDGGPLSHE
Sbjct: 241 SRQVDFDVGSASIYKSDGQIPANEIFVTNVRSLGVQEKAKLNDEKANDDTNRDGGPLSHE 300
Query: 301 PVGNDLAFECKGQFYDYFETGYNERNNVNESWKKSLRKKEASPPSNKLCCSKGSKI 356
PVGNDLAFECKGQFYDYFETGYNERNNVNESWKKSLRKKEASPPSNKLCCSKGSKI
Sbjct: 301 PVGNDLAFECKGQFYDYFETGYNERNNVNESWKKSLRKKEASPPSNKLCCSKGSKI 356
>gi|153792110 HEG homolog 1 [Homo sapiens]
Length = 1381
Score = 42.0 bits (97), Expect = 8e-04
Identities = 24/44 (54%), Positives = 31/44 (70%), Gaps = 1/44 (2%)
Query: 200 LNLP-LSVNANVGSASTAASSPSASSSSSSSSSSPPLPLPSCSR 242
+N+P SV + + + SS S+SSSSSSSSS PPLPLPS S+
Sbjct: 640 INMPNTSVVLDTDAEFVSDSSSSSSSSSSSSSSGPPLPLPSVSQ 683
>gi|18375613 dachshund homolog 1 isoform b [Homo sapiens]
Length = 558
Score = 38.5 bits (88), Expect = 0.009
Identities = 21/43 (48%), Positives = 30/43 (69%)
Query: 196 GGHYLNLPLSVNANVGSASTAASSPSASSSSSSSSSSPPLPLP 238
GG + P++ + S+S+++SS S+SSSSSSSSSS PLP
Sbjct: 126 GGVASSTPINASTGSSSSSSSSSSSSSSSSSSSSSSSSCGPLP 168
Score = 30.4 bits (67), Expect = 2.5
Identities = 19/35 (54%), Positives = 23/35 (65%), Gaps = 4/35 (11%)
Query: 206 VNANVGSASTAASSPSASSSSSSSSSSPPLPLPSC 240
+NA+ GS+S S S+SSSSSSSSSS SC
Sbjct: 134 INASTGSSS----SSSSSSSSSSSSSSSSSSSSSC 164
>gi|18375611 dachshund homolog 1 isoform a [Homo sapiens]
Length = 706
Score = 38.5 bits (88), Expect = 0.009
Identities = 21/43 (48%), Positives = 30/43 (69%)
Query: 196 GGHYLNLPLSVNANVGSASTAASSPSASSSSSSSSSSPPLPLP 238
GG + P++ + S+S+++SS S+SSSSSSSSSS PLP
Sbjct: 126 GGVASSTPINASTGSSSSSSSSSSSSSSSSSSSSSSSSCGPLP 168
Score = 30.4 bits (67), Expect = 2.5
Identities = 19/35 (54%), Positives = 23/35 (65%), Gaps = 4/35 (11%)
Query: 206 VNANVGSASTAASSPSASSSSSSSSSSPPLPLPSC 240
+NA+ GS+S S S+SSSSSSSSSS SC
Sbjct: 134 INASTGSSS----SSSSSSSSSSSSSSSSSSSSSC 164
>gi|18375609 dachshund homolog 1 isoform c [Homo sapiens]
Length = 504
Score = 38.5 bits (88), Expect = 0.009
Identities = 21/43 (48%), Positives = 30/43 (69%)
Query: 196 GGHYLNLPLSVNANVGSASTAASSPSASSSSSSSSSSPPLPLP 238
GG + P++ + S+S+++SS S+SSSSSSSSSS PLP
Sbjct: 126 GGVASSTPINASTGSSSSSSSSSSSSSSSSSSSSSSSSCGPLP 168
Score = 30.4 bits (67), Expect = 2.5
Identities = 19/35 (54%), Positives = 23/35 (65%), Gaps = 4/35 (11%)
Query: 206 VNANVGSASTAASSPSASSSSSSSSSSPPLPLPSC 240
+NA+ GS+S S S+SSSSSSSSSS SC
Sbjct: 134 INASTGSSS----SSSSSSSSSSSSSSSSSSSSSC 164
>gi|239750672 PREDICTED: hypothetical protein [Homo sapiens]
Length = 627
Score = 38.5 bits (88), Expect = 0.009
Identities = 24/50 (48%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Query: 203 PLSVNANVGSASTAASSPSASSSSSSSSSS-PPLPLPSCSRQVDFDVGSA 251
PLS A +A+ AAS+PSA SSSS SS+S P P P +R+ SA
Sbjct: 183 PLSPAAAAAAAAAAASAPSAGSSSSCSSASLPASPAPRAARKASPSPSSA 232
>gi|239744982 PREDICTED: hypothetical protein [Homo sapiens]
Length = 627
Score = 38.5 bits (88), Expect = 0.009
Identities = 24/50 (48%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Query: 203 PLSVNANVGSASTAASSPSASSSSSSSSSS-PPLPLPSCSRQVDFDVGSA 251
PLS A +A+ AAS+PSA SSSS SS+S P P P +R+ SA
Sbjct: 183 PLSPAAAAAAAAAAASAPSAGSSSSCSSASLPASPAPRAARKASPSPSSA 232
>gi|119395716 forkhead box C1 [Homo sapiens]
Length = 553
Score = 38.1 bits (87), Expect = 0.012
Identities = 24/41 (58%), Positives = 26/41 (63%), Gaps = 4/41 (9%)
Query: 203 PLSVNANVGSASTAA----SSPSASSSSSSSSSSPPLPLPS 239
PLS A +GS S AA SP +SSSS SS SSPP LPS
Sbjct: 239 PLSPAAALGSGSAAAVPKIESPDSSSSSLSSGSSPPGSLPS 279
>gi|192807286 zinc finger and BTB domain containing 4 [Homo sapiens]
Length = 1013
Score = 37.7 bits (86), Expect = 0.016
Identities = 20/35 (57%), Positives = 27/35 (77%)
Query: 207 NANVGSASTAASSPSASSSSSSSSSSPPLPLPSCS 241
+++ S+S+++SS SASSSSSSSSSSPP P S
Sbjct: 86 SSSSSSSSSSSSSSSASSSSSSSSSSPPPASPPAS 120
Score = 35.0 bits (79), Expect = 0.10
Identities = 18/37 (48%), Positives = 28/37 (75%)
Query: 205 SVNANVGSASTAASSPSASSSSSSSSSSPPLPLPSCS 241
S +++ S+S+++SS ++SSSSSSSSS PP P+ S
Sbjct: 85 SSSSSSSSSSSSSSSSASSSSSSSSSSPPPASPPASS 121
Score = 34.3 bits (77), Expect = 0.18
Identities = 20/44 (45%), Positives = 29/44 (65%)
Query: 196 GGHYLNLPLSVNANVGSASTAASSPSASSSSSSSSSSPPLPLPS 239
GG N + A+ S+S+++SS S+SS+SSSSSSS P P+
Sbjct: 72 GGAAPNPATTTAASSSSSSSSSSSSSSSSASSSSSSSSSSPPPA 115
Score = 31.2 bits (69), Expect = 1.5
Identities = 18/40 (45%), Positives = 27/40 (67%)
Query: 205 SVNANVGSASTAASSPSASSSSSSSSSSPPLPLPSCSRQV 244
S +++ S+S+++SS S+SSSSSSSS P P S +V
Sbjct: 86 SSSSSSSSSSSSSSSASSSSSSSSSSPPPASPPASSPPRV 125
Score = 30.0 bits (66), Expect = 3.3
Identities = 17/30 (56%), Positives = 21/30 (70%)
Query: 203 PLSVNANVGSASTAASSPSASSSSSSSSSS 232
P + A A+T A+S S+SSSSSSSSSS
Sbjct: 69 PATGGAAPNPATTTAASSSSSSSSSSSSSS 98
>gi|192807284 zinc finger and BTB domain containing 4 [Homo sapiens]
Length = 1013
Score = 37.7 bits (86), Expect = 0.016
Identities = 20/35 (57%), Positives = 27/35 (77%)
Query: 207 NANVGSASTAASSPSASSSSSSSSSSPPLPLPSCS 241
+++ S+S+++SS SASSSSSSSSSSPP P S
Sbjct: 86 SSSSSSSSSSSSSSSASSSSSSSSSSPPPASPPAS 120
Score = 35.0 bits (79), Expect = 0.10
Identities = 18/37 (48%), Positives = 28/37 (75%)
Query: 205 SVNANVGSASTAASSPSASSSSSSSSSSPPLPLPSCS 241
S +++ S+S+++SS ++SSSSSSSSS PP P+ S
Sbjct: 85 SSSSSSSSSSSSSSSSASSSSSSSSSSPPPASPPASS 121
Score = 34.3 bits (77), Expect = 0.18
Identities = 20/44 (45%), Positives = 29/44 (65%)
Query: 196 GGHYLNLPLSVNANVGSASTAASSPSASSSSSSSSSSPPLPLPS 239
GG N + A+ S+S+++SS S+SS+SSSSSSS P P+
Sbjct: 72 GGAAPNPATTTAASSSSSSSSSSSSSSSSASSSSSSSSSSPPPA 115
Score = 31.2 bits (69), Expect = 1.5
Identities = 18/40 (45%), Positives = 27/40 (67%)
Query: 205 SVNANVGSASTAASSPSASSSSSSSSSSPPLPLPSCSRQV 244
S +++ S+S+++SS S+SSSSSSSS P P S +V
Sbjct: 86 SSSSSSSSSSSSSSSASSSSSSSSSSPPPASPPASSPPRV 125
Score = 30.0 bits (66), Expect = 3.3
Identities = 17/30 (56%), Positives = 21/30 (70%)
Query: 203 PLSVNANVGSASTAASSPSASSSSSSSSSS 232
P + A A+T A+S S+SSSSSSSSSS
Sbjct: 69 PATGGAAPNPATTTAASSSSSSSSSSSSSS 98
>gi|55741677 SET domain containing 1A [Homo sapiens]
Length = 1707
Score = 36.2 bits (82), Expect = 0.046
Identities = 25/70 (35%), Positives = 36/70 (51%), Gaps = 9/70 (12%)
Query: 181 EECEKFHACCFYQECGGHYLNLPLSVNANVGSASTAASSPSASSSSSSSSSSP------- 233
EE + C Y + G + S +++ S+S+++SS S+SSSSSSSS S
Sbjct: 1009 EESDSSSKCSLYADSDGENDSTSDSESSSSSSSSSSSSSSSSSSSSSSSSESSSEDEEEE 1068
Query: 234 --PLPLPSCS 241
P LPS S
Sbjct: 1069 ERPAALPSAS 1078
Score = 29.6 bits (65), Expect = 4.3
Identities = 16/21 (76%), Positives = 19/21 (90%)
Query: 212 SASTAASSPSASSSSSSSSSS 232
+AS++ASS S SSSSSSSSSS
Sbjct: 334 TASSSASSSSLSSSSSSSSSS 354
Score = 29.3 bits (64), Expect = 5.6
Identities = 18/46 (39%), Positives = 25/46 (54%)
Query: 198 HYLNLPLSVNANVGSASTAASSPSASSSSSSSSSSPPLPLPSCSRQ 243
H+ S A+ A+T A++ S+S+SSSS SSS S S Q
Sbjct: 313 HFSASSASTTASTAIAATTAATASSSASSSSLSSSSSSSSSSSSSQ 358
Score = 28.9 bits (63), Expect = 7.4
Identities = 18/45 (40%), Positives = 27/45 (60%)
Query: 212 SASTAASSPSASSSSSSSSSSPPLPLPSCSRQVDFDVGSASIYKS 256
+A+TAA++ S++SSSS SSSS S S+ D + Y+S
Sbjct: 328 AATTAATASSSASSSSLSSSSSSSSSSSSSQFRSSDANYPAYYES 372
>gi|51873049 hypothetical protein LOC8603 [Homo sapiens]
Length = 1224
Score = 35.8 bits (81), Expect = 0.060
Identities = 32/100 (32%), Positives = 43/100 (43%), Gaps = 16/100 (16%)
Query: 169 DCPYRKRPRMAKEECEKFHACCFYQECGG---------HYLNLPLSVNANVGSASTAASS 219
+C YR+R A ++C H CG H LPL V+ S
Sbjct: 204 NCNYRRR--CACDDCSLSHILT----CGIMDPPVTDDIHIHQLPLQVDP-APDYLAERSP 256
Query: 220 PSASSSSSSSSSSPPLPLPSCSRQVDFDVGSASIYKSDGQ 259
PS SS+SS S SS P+ + R + D GSA + SD +
Sbjct: 257 PSVSSASSGSGSSSPITIQQHPRLILTDSGSAPTFCSDDE 296
>gi|239757409 PREDICTED: similar to zinc finger protein 208 [Homo
sapiens]
Length = 1059
Score = 35.0 bits (79), Expect = 0.10
Identities = 17/37 (45%), Positives = 27/37 (72%)
Query: 202 LPLSVNANVGSASTAASSPSASSSSSSSSSSPPLPLP 238
+P S +++ S+S+++SS S+SSSSSS + P PLP
Sbjct: 91 VPSSSSSSSSSSSSSSSSSSSSSSSSSQAKKPDPPLP 127
Score = 33.1 bits (74), Expect = 0.39
Identities = 21/39 (53%), Positives = 26/39 (66%), Gaps = 10/39 (25%)
Query: 208 ANVGSASTAASSPSASSSSSSSSSS----------PPLP 236
A V S+S+++SS S+SSSSSSSSSS PPLP
Sbjct: 89 AEVPSSSSSSSSSSSSSSSSSSSSSSSSSQAKKPDPPLP 127
>gi|239746371 PREDICTED: similar to zinc finger protein 208 [Homo
sapiens]
Length = 1059
Score = 35.0 bits (79), Expect = 0.10
Identities = 17/37 (45%), Positives = 27/37 (72%)
Query: 202 LPLSVNANVGSASTAASSPSASSSSSSSSSSPPLPLP 238
+P S +++ S+S+++SS S+SSSSSS + P PLP
Sbjct: 91 VPSSSSSSSSSSSSSSSSSSSSSSSSSQAKKPDPPLP 127
Score = 33.1 bits (74), Expect = 0.39
Identities = 21/39 (53%), Positives = 26/39 (66%), Gaps = 10/39 (25%)
Query: 208 ANVGSASTAASSPSASSSSSSSSSS----------PPLP 236
A V S+S+++SS S+SSSSSSSSSS PPLP
Sbjct: 89 AEVPSSSSSSSSSSSSSSSSSSSSSSSSSQAKKPDPPLP 127
>gi|12669915 E2F transcription factor 4 [Homo sapiens]
Length = 413
Score = 35.0 bits (79), Expect = 0.10
Identities = 19/37 (51%), Positives = 28/37 (75%)
Query: 203 PLSVNANVGSASTAASSPSASSSSSSSSSSPPLPLPS 239
PL +A + S+S+++SS S+SS+S+SSSSS P P S
Sbjct: 298 PLQSSALLDSSSSSSSSSSSSSNSNSSSSSGPNPSTS 334
>gi|38679909 testis expressed sequence 2 [Homo sapiens]
Length = 1134
Score = 35.0 bits (79), Expect = 0.10
Identities = 34/135 (25%), Positives = 59/135 (43%), Gaps = 22/135 (16%)
Query: 202 LPLSVNANVGSASTAASSPSASS-SSSSSSSSPPLPLPSCSRQVDFDVGSASIYKSDGQI 260
+PL+V+ S+ ASSPS SS S +SSS PL PS S + ++++ +
Sbjct: 130 VPLAVSPGSSSSGPLASSPSVSSLSEQKTSSSSPLSSPSKSPILSSSASTSTLSSA---- 185
Query: 261 PANEIFVTNVRSLGVQEKAKLNDEKA--------------NDDTNRDGGPLSHEPVGNDL 306
+ F++ V+SL + + K + A D + ++ +S++P + L
Sbjct: 186 ---KPFMSLVKSLSTEVEPKESPHPARHRHLMKTLVKSLSTDTSRQESDTVSYKPPDSKL 242
Query: 307 AFECKGQFYDYFETG 321
QF TG
Sbjct: 243 NLHLFKQFTQPRNTG 257
>gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]
Length = 2752
Score = 34.7 bits (78), Expect = 0.13
Identities = 18/32 (56%), Positives = 26/32 (81%)
Query: 205 SVNANVGSASTAASSPSASSSSSSSSSSPPLP 236
S +++ S+S+++SS S+SSSSSSSSSS P P
Sbjct: 2620 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSPSP 2651
Score = 33.9 bits (76), Expect = 0.23
Identities = 18/35 (51%), Positives = 27/35 (77%)
Query: 205 SVNANVGSASTAASSPSASSSSSSSSSSPPLPLPS 239
S +++ S+S+++SS S+SSSSSSSSSS P P+
Sbjct: 2618 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSPSPA 2652
Score = 33.9 bits (76), Expect = 0.23
Identities = 18/34 (52%), Positives = 26/34 (76%)
Query: 205 SVNANVGSASTAASSPSASSSSSSSSSSPPLPLP 238
S +++ S+S+++SS S+SSSSSSSS SP P P
Sbjct: 2623 SSSSSSSSSSSSSSSSSSSSSSSSSSPSPAKPGP 2656
Score = 32.0 bits (71), Expect = 0.87
Identities = 18/35 (51%), Positives = 26/35 (74%)
Query: 205 SVNANVGSASTAASSPSASSSSSSSSSSPPLPLPS 239
S +++ S+S+++SS S+SSSSSSSSSS PS
Sbjct: 2616 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSPS 2650
Score = 30.4 bits (67), Expect = 2.5
Identities = 16/28 (57%), Positives = 24/28 (85%)
Query: 205 SVNANVGSASTAASSPSASSSSSSSSSS 232
S +++ S+S+++SS S+SSSSSSSSSS
Sbjct: 2607 SSSSSSSSSSSSSSSSSSSSSSSSSSSS 2634
Score = 30.4 bits (67), Expect = 2.5
Identities = 16/28 (57%), Positives = 24/28 (85%)
Query: 205 SVNANVGSASTAASSPSASSSSSSSSSS 232
S +++ S+S+++SS S+SSSSSSSSSS
Sbjct: 2608 SSSSSSSSSSSSSSSSSSSSSSSSSSSS 2635
Score = 30.4 bits (67), Expect = 2.5
Identities = 16/28 (57%), Positives = 24/28 (85%)
Query: 205 SVNANVGSASTAASSPSASSSSSSSSSS 232
S +++ S+S+++SS S+SSSSSSSSSS
Sbjct: 2609 SSSSSSSSSSSSSSSSSSSSSSSSSSSS 2636
Score = 30.4 bits (67), Expect = 2.5
Identities = 16/28 (57%), Positives = 24/28 (85%)
Query: 205 SVNANVGSASTAASSPSASSSSSSSSSS 232
S +++ S+S+++SS S+SSSSSSSSSS
Sbjct: 2610 SSSSSSSSSSSSSSSSSSSSSSSSSSSS 2637
Score = 30.4 bits (67), Expect = 2.5
Identities = 16/28 (57%), Positives = 24/28 (85%)
Query: 205 SVNANVGSASTAASSPSASSSSSSSSSS 232
S +++ S+S+++SS S+SSSSSSSSSS
Sbjct: 2611 SSSSSSSSSSSSSSSSSSSSSSSSSSSS 2638
Score = 30.4 bits (67), Expect = 2.5
Identities = 16/28 (57%), Positives = 24/28 (85%)
Query: 205 SVNANVGSASTAASSPSASSSSSSSSSS 232
S +++ S+S+++SS S+SSSSSSSSSS
Sbjct: 2612 SSSSSSSSSSSSSSSSSSSSSSSSSSSS 2639
Score = 30.4 bits (67), Expect = 2.5
Identities = 16/28 (57%), Positives = 24/28 (85%)
Query: 205 SVNANVGSASTAASSPSASSSSSSSSSS 232
S +++ S+S+++SS S+SSSSSSSSSS
Sbjct: 2613 SSSSSSSSSSSSSSSSSSSSSSSSSSSS 2640
Score = 30.4 bits (67), Expect = 2.5
Identities = 16/28 (57%), Positives = 24/28 (85%)
Query: 205 SVNANVGSASTAASSPSASSSSSSSSSS 232
S +++ S+S+++SS S+SSSSSSSSSS
Sbjct: 2614 SSSSSSSSSSSSSSSSSSSSSSSSSSSS 2641
Score = 30.4 bits (67), Expect = 2.5
Identities = 16/28 (57%), Positives = 24/28 (85%)
Query: 205 SVNANVGSASTAASSPSASSSSSSSSSS 232
S +++ S+S+++SS S+SSSSSSSSSS
Sbjct: 2615 SSSSSSSSSSSSSSSSSSSSSSSSSSSS 2642
Score = 30.0 bits (66), Expect = 3.3
Identities = 16/30 (53%), Positives = 22/30 (73%)
Query: 203 PLSVNANVGSASTAASSPSASSSSSSSSSS 232
P + S+S+++SS S+SSSSSSSSSS
Sbjct: 2526 PAKERRSSSSSSSSSSSSSSSSSSSSSSSS 2555
Score = 29.6 bits (65), Expect = 4.3
Identities = 19/41 (46%), Positives = 25/41 (60%)
Query: 212 SASTAASSPSASSSSSSSSSSPPLPLPSCSRQVDFDVGSAS 252
S+S+++SS S+SSSSSSSSSS S S S+S
Sbjct: 2607 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 2647
Score = 29.6 bits (65), Expect = 4.3
Identities = 19/41 (46%), Positives = 25/41 (60%)
Query: 212 SASTAASSPSASSSSSSSSSSPPLPLPSCSRQVDFDVGSAS 252
S+S+++SS S+SSSSSSSSSS S S S+S
Sbjct: 2608 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 2648
Score = 29.3 bits (64), Expect = 5.6
Identities = 16/34 (47%), Positives = 24/34 (70%)
Query: 205 SVNANVGSASTAASSPSASSSSSSSSSSPPLPLP 238
S +++ S+S+++SS S+SSS SSSS S LP
Sbjct: 2536 SSSSSSSSSSSSSSSSSSSSSGSSSSDSEGSSLP 2569
Score = 28.9 bits (63), Expect = 7.4
Identities = 15/28 (53%), Positives = 23/28 (82%)
Query: 205 SVNANVGSASTAASSPSASSSSSSSSSS 232
S +++ S+S+++SS S+SSSSSSS SS
Sbjct: 2532 SSSSSSSSSSSSSSSSSSSSSSSSSGSS 2559
Score = 28.9 bits (63), Expect = 7.4
Identities = 15/28 (53%), Positives = 23/28 (82%)
Query: 205 SVNANVGSASTAASSPSASSSSSSSSSS 232
S +++ S+S+++SS S+SSSSSS SSS
Sbjct: 2533 SSSSSSSSSSSSSSSSSSSSSSSSGSSS 2560
Score = 28.9 bits (63), Expect = 7.4
Identities = 15/28 (53%), Positives = 23/28 (82%)
Query: 205 SVNANVGSASTAASSPSASSSSSSSSSS 232
S +++ S+S+++SS S+SSSSS SSSS
Sbjct: 2534 SSSSSSSSSSSSSSSSSSSSSSSGSSSS 2561
Score = 28.5 bits (62), Expect = 9.6
Identities = 20/46 (43%), Positives = 23/46 (50%)
Query: 217 ASSPSASSSSSSSSSSPPLPLPSCSRQVDFDVGSASIYKSDGQIPA 262
+SS S+SSSSSSSSSS S S S+S S PA
Sbjct: 2607 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSPSPA 2652
>gi|238624132 large conductance calcium-activated potassium channel
subfamily M alpha member 1 isoform d [Homo sapiens]
Length = 1219
Score = 34.3 bits (77), Expect = 0.18
Identities = 19/37 (51%), Positives = 26/37 (70%)
Query: 196 GGHYLNLPLSVNANVGSASTAASSPSASSSSSSSSSS 232
GG L + +++AN S ++SS S+SSSSSSSSSS
Sbjct: 19 GGSSLRMSSNIHANHLSLDASSSSSSSSSSSSSSSSS 55
Score = 32.7 bits (73), Expect = 0.51
Identities = 20/37 (54%), Positives = 24/37 (64%)
Query: 196 GGHYLNLPLSVNANVGSASTAASSPSASSSSSSSSSS 232
GG +L +S N + S ASS S+SSSSSSSSSS
Sbjct: 17 GGGGSSLRMSSNIHANHLSLDASSSSSSSSSSSSSSS 53
Score = 32.3 bits (72), Expect = 0.67
Identities = 17/31 (54%), Positives = 25/31 (80%)
Query: 204 LSVNANVGSASTAASSPSASSSSSSSSSSPP 234
LS++A+ S+S+++SS S+SSSSSSSS P
Sbjct: 34 LSLDASSSSSSSSSSSSSSSSSSSSSSVHEP 64
>gi|238624130 large conductance calcium-activated potassium channel
subfamily M alpha member 1 isoform c [Homo sapiens]
Length = 1236
Score = 34.3 bits (77), Expect = 0.18
Identities = 19/37 (51%), Positives = 26/37 (70%)
Query: 196 GGHYLNLPLSVNANVGSASTAASSPSASSSSSSSSSS 232
GG L + +++AN S ++SS S+SSSSSSSSSS
Sbjct: 19 GGSSLRMSSNIHANHLSLDASSSSSSSSSSSSSSSSS 55
Score = 32.7 bits (73), Expect = 0.51
Identities = 20/37 (54%), Positives = 24/37 (64%)
Query: 196 GGHYLNLPLSVNANVGSASTAASSPSASSSSSSSSSS 232
GG +L +S N + S ASS S+SSSSSSSSSS
Sbjct: 17 GGGGSSLRMSSNIHANHLSLDASSSSSSSSSSSSSSS 53
Score = 32.3 bits (72), Expect = 0.67
Identities = 17/31 (54%), Positives = 25/31 (80%)
Query: 204 LSVNANVGSASTAASSPSASSSSSSSSSSPP 234
LS++A+ S+S+++SS S+SSSSSSSS P
Sbjct: 34 LSLDASSSSSSSSSSSSSSSSSSSSSSVHEP 64
>gi|62388890 large conductance calcium-activated potassium channel
subfamily M alpha member 1 isoform a [Homo sapiens]
Length = 1182
Score = 34.3 bits (77), Expect = 0.18
Identities = 19/37 (51%), Positives = 26/37 (70%)
Query: 196 GGHYLNLPLSVNANVGSASTAASSPSASSSSSSSSSS 232
GG L + +++AN S ++SS S+SSSSSSSSSS
Sbjct: 19 GGSSLRMSSNIHANHLSLDASSSSSSSSSSSSSSSSS 55
Score = 32.7 bits (73), Expect = 0.51
Identities = 20/37 (54%), Positives = 24/37 (64%)
Query: 196 GGHYLNLPLSVNANVGSASTAASSPSASSSSSSSSSS 232
GG +L +S N + S ASS S+SSSSSSSSSS
Sbjct: 17 GGGGSSLRMSSNIHANHLSLDASSSSSSSSSSSSSSS 53
Score = 32.3 bits (72), Expect = 0.67
Identities = 17/31 (54%), Positives = 25/31 (80%)
Query: 204 LSVNANVGSASTAASSPSASSSSSSSSSSPP 234
LS++A+ S+S+++SS S+SSSSSSSS P
Sbjct: 34 LSLDASSSSSSSSSSSSSSSSSSSSSSVHEP 64
>gi|26638650 large conductance calcium-activated potassium channel
subfamily M alpha member 1 isoform b [Homo sapiens]
Length = 1178
Score = 34.3 bits (77), Expect = 0.18
Identities = 19/37 (51%), Positives = 26/37 (70%)
Query: 196 GGHYLNLPLSVNANVGSASTAASSPSASSSSSSSSSS 232
GG L + +++AN S ++SS S+SSSSSSSSSS
Sbjct: 19 GGSSLRMSSNIHANHLSLDASSSSSSSSSSSSSSSSS 55
Score = 32.7 bits (73), Expect = 0.51
Identities = 20/37 (54%), Positives = 24/37 (64%)
Query: 196 GGHYLNLPLSVNANVGSASTAASSPSASSSSSSSSSS 232
GG +L +S N + S ASS S+SSSSSSSSSS
Sbjct: 17 GGGGSSLRMSSNIHANHLSLDASSSSSSSSSSSSSSS 53
Score = 32.3 bits (72), Expect = 0.67
Identities = 17/31 (54%), Positives = 25/31 (80%)
Query: 204 LSVNANVGSASTAASSPSASSSSSSSSSSPP 234
LS++A+ S+S+++SS S+SSSSSSSS P
Sbjct: 34 LSLDASSSSSSSSSSSSSSSSSSSSSSVHEP 64
>gi|239756174 PREDICTED: hypothetical protein [Homo sapiens]
Length = 625
Score = 34.3 bits (77), Expect = 0.18
Identities = 24/50 (48%), Positives = 30/50 (60%), Gaps = 3/50 (6%)
Query: 203 PLSVNANVGSASTAASSPSASSSSSSSSSS-PPLPLPSCSRQVDFDVGSA 251
PLS A +A+ AAS+PSA SSSS SS+S P P P +R+ SA
Sbjct: 183 PLSPAA--AAAAAAASAPSAGSSSSCSSASLPASPAPRAARKASPSPSSA 230
>gi|58530863 melanoma antigen family A, 10 [Homo sapiens]
Length = 369
Score = 33.9 bits (76), Expect = 0.23
Identities = 23/47 (48%), Positives = 30/47 (63%), Gaps = 2/47 (4%)
Query: 203 PLSVNANVGSA-STAASSPSASSSSSSSSSSPPLPL-PSCSRQVDFD 247
PL+V + S+ ST++S PS+ SSSSSSSS PL PS +V D
Sbjct: 31 PLAVEEDASSSTSTSSSFPSSFPSSSSSSSSSCYPLIPSTPEEVSAD 77
>gi|10567820 melanoma antigen family A, 10 [Homo sapiens]
Length = 369
Score = 33.9 bits (76), Expect = 0.23
Identities = 23/47 (48%), Positives = 30/47 (63%), Gaps = 2/47 (4%)
Query: 203 PLSVNANVGSA-STAASSPSASSSSSSSSSSPPLPL-PSCSRQVDFD 247
PL+V + S+ ST++S PS+ SSSSSSSS PL PS +V D
Sbjct: 31 PLAVEEDASSSTSTSSSFPSSFPSSSSSSSSSCYPLIPSTPEEVSAD 77
>gi|167621456 kinase suppressor of ras 2 [Homo sapiens]
Length = 921
Score = 33.9 bits (76), Expect = 0.23
Identities = 18/61 (29%), Positives = 37/61 (60%), Gaps = 4/61 (6%)
Query: 199 YLNLPLSVNANVGSASTAASSPSASSSSSSSSSSPPLPL---PSCSR-QVDFDVGSASIY 254
++ +P +++ +ST +S+PS+ + S++PP PL P C+R Q +F++ ++ Y
Sbjct: 479 HIPVPYQPDSSSNPSSTTSSTPSSPAPPLPPSATPPSPLHPSPQCTRQQKNFNLPASHYY 538
Query: 255 K 255
K
Sbjct: 539 K 539
>gi|242247193 SH2B adaptor protein 2 [Homo sapiens]
Length = 675
Score = 33.5 bits (75), Expect = 0.30
Identities = 18/49 (36%), Positives = 26/49 (53%)
Query: 190 CFYQECGGHYLNLPLSVNANVGSASTAASSPSASSSSSSSSSSPPLPLP 238
C+ G HY + + S S AA + S+S+SSSS++S P P P
Sbjct: 580 CWSDSPGQHYFSSLAAAACPPASPSDAAGASSSSASSSSAASGPAPPRP 628
>gi|239750235 PREDICTED: hypothetical protein [Homo sapiens]
Length = 257
Score = 33.5 bits (75), Expect = 0.30
Identities = 17/27 (62%), Positives = 21/27 (77%)
Query: 212 SASTAASSPSASSSSSSSSSSPPLPLP 238
S+ +++SSPS SS SSS SSS PLP P
Sbjct: 176 SSPSSSSSPSYSSPSSSPSSSSPLPPP 202
Score = 29.6 bits (65), Expect = 4.3
Identities = 21/55 (38%), Positives = 28/55 (50%)
Query: 200 LNLPLSVNANVGSASTAASSPSASSSSSSSSSSPPLPLPSCSRQVDFDVGSASIY 254
L LPL + + +S+ +SS S S SS SSS S PLP F S+S +
Sbjct: 162 LFLPLFIPLFLLPSSSPSSSSSPSYSSPSSSPSSSSPLPPPPPPPSFSSSSSSSF 216
>gi|239744535 PREDICTED: hypothetical protein XP_002343184 [Homo
sapiens]
Length = 257
Score = 33.5 bits (75), Expect = 0.30
Identities = 17/27 (62%), Positives = 21/27 (77%)
Query: 212 SASTAASSPSASSSSSSSSSSPPLPLP 238
S+ +++SSPS SS SSS SSS PLP P
Sbjct: 176 SSPSSSSSPSYSSPSSSPSSSSPLPPP 202
Score = 29.6 bits (65), Expect = 4.3
Identities = 21/55 (38%), Positives = 28/55 (50%)
Query: 200 LNLPLSVNANVGSASTAASSPSASSSSSSSSSSPPLPLPSCSRQVDFDVGSASIY 254
L LPL + + +S+ +SS S S SS SSS S PLP F S+S +
Sbjct: 162 LFLPLFIPLFLLPSSSPSSSSSPSYSSPSSSPSSSSPLPPPPPPPSFSSSSSSSF 216
>gi|163937854 ataxin 7-like 1 isoform 1 [Homo sapiens]
Length = 861
Score = 33.5 bits (75), Expect = 0.30
Identities = 19/38 (50%), Positives = 25/38 (65%)
Query: 201 NLPLSVNANVGSASTAASSPSASSSSSSSSSSPPLPLP 238
NL + ANV ST ++ SASS+SSS+ S+PPL P
Sbjct: 206 NLVKADGANVKMNSTTTTAVSASSTSSSAVSTPPLIKP 243
>gi|211971080 ataxin 7-like 1 isoform 3 [Homo sapiens]
Length = 738
Score = 33.5 bits (75), Expect = 0.30
Identities = 19/38 (50%), Positives = 25/38 (65%)
Query: 201 NLPLSVNANVGSASTAASSPSASSSSSSSSSSPPLPLP 238
NL + ANV ST ++ SASS+SSS+ S+PPL P
Sbjct: 82 NLVKADGANVKMNSTTTTAVSASSTSSSAVSTPPLIKP 119
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.315 0.131 0.402
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,149,398
Number of Sequences: 37866
Number of extensions: 816676
Number of successful extensions: 7578
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 112
Number of HSP's successfully gapped in prelim test: 75
Number of HSP's that attempted gapping in prelim test: 5907
Number of HSP's gapped (non-prelim): 1044
length of query: 356
length of database: 18,247,518
effective HSP length: 103
effective length of query: 253
effective length of database: 14,347,320
effective search space: 3629871960
effective search space used: 3629871960
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.