Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

BLASTP matches in selected species for LOC400236 - GI:169207076

The following table provides the supporting data for the comparative genomics plot for this protein. Select the protein identifier to see the matching RefSeq entry at NCBI. Searches at NCBI may reflect newer proteins sets or multiple strains of that species.

Species          Protein        Score Size(aa) Description

Self-match       169207076        690    330   PREDICTED: hypothetical protein
M. musculus      226423933         65   1464   collagen, type III, alpha 1 
D. rerio         48762667          60   1352   collagen, type I, alpha 2 
C. intestinalis  198416097         57   1831   PREDICTED: similar to collagen, type ...
S. purpuratus    47551001          65   1414   alpha-1 collagen 
D. melanogaster  24652652          53    610   Cuticular protein 47Ef CG13214-PA, is...
C. elegans       17540706          60    371   COLlagen family member (col-103) 
A. thaliana      15219287          51    414   SR45 (arginine/serine-rich 45); RNA b...
S. cerevisiae    42742305          32    199   Protein of unknown function; may inte...
E. coli          89107648          32    454   RNA helicase 
A. pernix        14601009          28    421   hypothetical protein APE_0840 

Search results were obtained with NCBI BLAST and RefSeq entries.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press