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Search of human proteins with 169178065
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|169178065 PREDICTED: hypothetical protein [Homo sapiens]
(150 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|169178065 PREDICTED: hypothetical protein [Homo sapiens] 325 9e-90
gi|169179313 PREDICTED: hypothetical protein [Homo sapiens] 323 3e-89
gi|169181069 PREDICTED: hypothetical protein [Homo sapiens] 323 3e-89
gi|209862893 zinc finger, MYND-type containing 15 isoform 1 [Hom... 30 0.59
gi|14149999 zinc finger, MYND-type containing 15 isoform 2 [Homo... 30 0.59
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 28 2.2
gi|153251865 hypothetical protein LOC84226 [Homo sapiens] 28 2.2
gi|13027606 mitochondrial ribosomal protein L34 [Homo sapiens] 28 2.2
gi|21361959 solute carrier family 35, member F5 [Homo sapiens] 28 3.8
gi|239757007 PREDICTED: hypothetical protein [Homo sapiens] 27 5.0
gi|239751521 PREDICTED: hypothetical protein XP_002347881 [Homo ... 27 5.0
gi|239746028 PREDICTED: hypothetical protein XP_002344185 [Homo ... 27 5.0
gi|32455273 WNK lysine deficient protein kinase 2 [Homo sapiens] 27 5.0
gi|16554449 zonadhesin isoform 3 [Homo sapiens] 27 5.0
gi|27881494 zonadhesin isoform 6 [Homo sapiens] 27 5.0
gi|169213867 PREDICTED: hypothetical protein LOC100128682 [Homo ... 27 6.5
gi|169214305 PREDICTED: hypothetical protein LOC100128682 [Homo ... 27 6.5
gi|169213267 PREDICTED: hypothetical protein LOC100128682 [Homo ... 27 6.5
gi|21040326 SON DNA-binding protein isoform F [Homo sapiens] 27 6.5
gi|21040314 SON DNA-binding protein isoform B [Homo sapiens] 27 6.5
gi|156766050 AHNAK nucleoprotein 2 [Homo sapiens] 27 6.5
>gi|169178065 PREDICTED: hypothetical protein [Homo sapiens]
Length = 150
Score = 325 bits (833), Expect = 9e-90
Identities = 150/150 (100%), Positives = 150/150 (100%)
Query: 1 MKISSHQTDYIEATWLLELSGLSLKGRCIRAKTQPSSPPIRAALGLPLCQQNLWIAADGV 60
MKISSHQTDYIEATWLLELSGLSLKGRCIRAKTQPSSPPIRAALGLPLCQQNLWIAADGV
Sbjct: 1 MKISSHQTDYIEATWLLELSGLSLKGRCIRAKTQPSSPPIRAALGLPLCQQNLWIAADGV 60
Query: 61 SQLSGPGRPFGNPWLLGHNILGTTKKPFHLSFGKEEQLRLWVAHVTIWKPAGPQQTRCKL 120
SQLSGPGRPFGNPWLLGHNILGTTKKPFHLSFGKEEQLRLWVAHVTIWKPAGPQQTRCKL
Sbjct: 61 SQLSGPGRPFGNPWLLGHNILGTTKKPFHLSFGKEEQLRLWVAHVTIWKPAGPQQTRCKL 120
Query: 121 LGGKDSVCFTSKASAWHVPCKWQCQWTYAR 150
LGGKDSVCFTSKASAWHVPCKWQCQWTYAR
Sbjct: 121 LGGKDSVCFTSKASAWHVPCKWQCQWTYAR 150
>gi|169179313 PREDICTED: hypothetical protein [Homo sapiens]
Length = 150
Score = 323 bits (829), Expect = 3e-89
Identities = 149/150 (99%), Positives = 150/150 (100%)
Query: 1 MKISSHQTDYIEATWLLELSGLSLKGRCIRAKTQPSSPPIRAALGLPLCQQNLWIAADGV 60
MKISSHQTDYIEATWLLELSGLSLKGRCIRAKT+PSSPPIRAALGLPLCQQNLWIAADGV
Sbjct: 1 MKISSHQTDYIEATWLLELSGLSLKGRCIRAKTRPSSPPIRAALGLPLCQQNLWIAADGV 60
Query: 61 SQLSGPGRPFGNPWLLGHNILGTTKKPFHLSFGKEEQLRLWVAHVTIWKPAGPQQTRCKL 120
SQLSGPGRPFGNPWLLGHNILGTTKKPFHLSFGKEEQLRLWVAHVTIWKPAGPQQTRCKL
Sbjct: 61 SQLSGPGRPFGNPWLLGHNILGTTKKPFHLSFGKEEQLRLWVAHVTIWKPAGPQQTRCKL 120
Query: 121 LGGKDSVCFTSKASAWHVPCKWQCQWTYAR 150
LGGKDSVCFTSKASAWHVPCKWQCQWTYAR
Sbjct: 121 LGGKDSVCFTSKASAWHVPCKWQCQWTYAR 150
>gi|169181069 PREDICTED: hypothetical protein [Homo sapiens]
Length = 150
Score = 323 bits (829), Expect = 3e-89
Identities = 149/150 (99%), Positives = 150/150 (100%)
Query: 1 MKISSHQTDYIEATWLLELSGLSLKGRCIRAKTQPSSPPIRAALGLPLCQQNLWIAADGV 60
MKISSHQTDYIEATWLLELSGLSLKGRCIRAKT+PSSPPIRAALGLPLCQQNLWIAADGV
Sbjct: 1 MKISSHQTDYIEATWLLELSGLSLKGRCIRAKTRPSSPPIRAALGLPLCQQNLWIAADGV 60
Query: 61 SQLSGPGRPFGNPWLLGHNILGTTKKPFHLSFGKEEQLRLWVAHVTIWKPAGPQQTRCKL 120
SQLSGPGRPFGNPWLLGHNILGTTKKPFHLSFGKEEQLRLWVAHVTIWKPAGPQQTRCKL
Sbjct: 61 SQLSGPGRPFGNPWLLGHNILGTTKKPFHLSFGKEEQLRLWVAHVTIWKPAGPQQTRCKL 120
Query: 121 LGGKDSVCFTSKASAWHVPCKWQCQWTYAR 150
LGGKDSVCFTSKASAWHVPCKWQCQWTYAR
Sbjct: 121 LGGKDSVCFTSKASAWHVPCKWQCQWTYAR 150
>gi|209862893 zinc finger, MYND-type containing 15 isoform 1 [Homo
sapiens]
Length = 742
Score = 30.4 bits (67), Expect = 0.59
Identities = 24/71 (33%), Positives = 29/71 (40%), Gaps = 7/71 (9%)
Query: 21 GLSLKGRCIRAKTQPSSPPIRAALGLPLCQQNLWIAAD-GVSQLSGPGRPFGNPWLLGHN 79
G SL+GRC + + Q P AL + N + G GPG G WLLG N
Sbjct: 33 GTSLEGRCRQLEAQIRRLPQDPALWVLHVLPNHSVGISLGQGAEPGPGPGLGTAWLLGDN 92
Query: 80 ILGTTKKPFHL 90
P HL
Sbjct: 93 ------PPLHL 97
>gi|14149999 zinc finger, MYND-type containing 15 isoform 2 [Homo
sapiens]
Length = 703
Score = 30.4 bits (67), Expect = 0.59
Identities = 24/71 (33%), Positives = 29/71 (40%), Gaps = 7/71 (9%)
Query: 21 GLSLKGRCIRAKTQPSSPPIRAALGLPLCQQNLWIAAD-GVSQLSGPGRPFGNPWLLGHN 79
G SL+GRC + + Q P AL + N + G GPG G WLLG N
Sbjct: 33 GTSLEGRCRQLEAQIRRLPQDPALWVLHVLPNHSVGISLGQGAEPGPGPGLGTAWLLGDN 92
Query: 80 ILGTTKKPFHL 90
P HL
Sbjct: 93 ------PPLHL 97
>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 1124
Score = 28.5 bits (62), Expect = 2.2
Identities = 15/36 (41%), Positives = 18/36 (50%)
Query: 31 AKTQPSSPPIRAALGLPLCQQNLWIAADGVSQLSGP 66
A T P SPP++A L LP + VS LS P
Sbjct: 448 ASTPPDSPPLQAPLSLPASPPLQTSLSPAVSPLSSP 483
>gi|153251865 hypothetical protein LOC84226 [Homo sapiens]
Length = 1984
Score = 28.5 bits (62), Expect = 2.2
Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 3/52 (5%)
Query: 3 ISSHQTDYIEATWLLELSGLSLKGRCIRAKTQPSSPPIRAA---LGLPLCQQ 51
+S +TD+ E LLE L + + +R++ P PP A+ L P+C Q
Sbjct: 1072 LSQAKTDFSEQFQLLEDLQLKIAAKLLRSQIPPDVPPPLASGLVLKYPICLQ 1123
>gi|13027606 mitochondrial ribosomal protein L34 [Homo sapiens]
Length = 92
Score = 28.5 bits (62), Expect = 2.2
Identities = 16/50 (32%), Positives = 23/50 (46%)
Query: 75 LLGHNILGTTKKPFHLSFGKEEQLRLWVAHVTIWKPAGPQQTRCKLLGGK 124
+L ++LG T + L G+ Q R W+ W PQQ R K G +
Sbjct: 3 VLAGSLLGPTSRSAALLGGRWLQPRAWLGFPDAWGLPTPQQARGKARGNE 52
>gi|21361959 solute carrier family 35, member F5 [Homo sapiens]
Length = 523
Score = 27.7 bits (60), Expect = 3.8
Identities = 19/55 (34%), Positives = 25/55 (45%), Gaps = 3/55 (5%)
Query: 86 KPFHLSFGKEEQLRLWVAHVTIWKPAGPQQTRCKLLGGKDSVCFTSKASAWHVPC 140
KPF +F K L++ IWKP Q TR L GK + F + A + C
Sbjct: 99 KPFFSTFAKTSMFVLYLLGFIIWKPWRQQCTRG--LRGKHA-AFFADAEGYFAAC 150
>gi|239757007 PREDICTED: hypothetical protein [Homo sapiens]
Length = 147
Score = 27.3 bits (59), Expect = 5.0
Identities = 18/59 (30%), Positives = 27/59 (45%), Gaps = 6/59 (10%)
Query: 36 SSPPIRAALGLPLCQQNLWIAADGVSQLSGPGRPFGNPWLLGHNILGTTKKPFHLSFGK 94
++PP+ + GLP CQ + + GPG P L H++L T F +F K
Sbjct: 75 AAPPLHS--GLPSCQVHSLTSTPS----EGPGEPLPGLEFLPHHMLDTAVGSFMGNFSK 127
>gi|239751521 PREDICTED: hypothetical protein XP_002347881 [Homo
sapiens]
Length = 147
Score = 27.3 bits (59), Expect = 5.0
Identities = 18/59 (30%), Positives = 27/59 (45%), Gaps = 6/59 (10%)
Query: 36 SSPPIRAALGLPLCQQNLWIAADGVSQLSGPGRPFGNPWLLGHNILGTTKKPFHLSFGK 94
++PP+ + GLP CQ + + GPG P L H++L T F +F K
Sbjct: 75 AAPPLHS--GLPSCQVHSLTSTPS----EGPGEPLPGLEFLPHHMLDTAVGSFMGNFSK 127
>gi|239746028 PREDICTED: hypothetical protein XP_002344185 [Homo
sapiens]
Length = 147
Score = 27.3 bits (59), Expect = 5.0
Identities = 18/59 (30%), Positives = 27/59 (45%), Gaps = 6/59 (10%)
Query: 36 SSPPIRAALGLPLCQQNLWIAADGVSQLSGPGRPFGNPWLLGHNILGTTKKPFHLSFGK 94
++PP+ + GLP CQ + + GPG P L H++L T F +F K
Sbjct: 75 AAPPLHS--GLPSCQVHSLTSTPS----EGPGEPLPGLEFLPHHMLDTAVGSFMGNFSK 127
>gi|32455273 WNK lysine deficient protein kinase 2 [Homo sapiens]
Length = 2217
Score = 27.3 bits (59), Expect = 5.0
Identities = 22/71 (30%), Positives = 28/71 (39%), Gaps = 3/71 (4%)
Query: 4 SSHQTDYIEATWLLELSGLSLKGRCIRAKTQPSSPPIRAAL---GLPLCQQNLWIAADGV 60
S Q ++ + LL +G S A PSSPP+ A P A+
Sbjct: 1355 SKEQPSFLASQQLLSQAGPSNPPGAPPAPLAPSSPPVTALPQDGAAPATSTMPEPASGTA 1414
Query: 61 SQLSGPGRPFG 71
SQ GPG P G
Sbjct: 1415 SQAGGPGTPQG 1425
>gi|16554449 zonadhesin isoform 3 [Homo sapiens]
Length = 2812
Score = 27.3 bits (59), Expect = 5.0
Identities = 14/34 (41%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Query: 108 WKPAGPQQTRCKLLGGKDSVC-FTSKASAWHVPC 140
WK + C L+GGK S C S A AW+ C
Sbjct: 1709 WKLPESSEPGCFLVGGKPSSCQENSMADAWNKNC 1742
>gi|27881494 zonadhesin isoform 6 [Homo sapiens]
Length = 2721
Score = 27.3 bits (59), Expect = 5.0
Identities = 14/34 (41%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Query: 108 WKPAGPQQTRCKLLGGKDSVC-FTSKASAWHVPC 140
WK + C L+GGK S C S A AW+ C
Sbjct: 1709 WKLPESSEPGCFLVGGKPSSCQENSMADAWNKNC 1742
>gi|169213867 PREDICTED: hypothetical protein LOC100128682 [Homo
sapiens]
Length = 299
Score = 26.9 bits (58), Expect = 6.5
Identities = 10/25 (40%), Positives = 12/25 (48%)
Query: 123 GKDSVCFTSKASAWHVPCKWQCQWT 147
G S TS S+W C W C W+
Sbjct: 4 GSVSAMRTSPKSSWPWCCSWSCAWS 28
>gi|169214305 PREDICTED: hypothetical protein LOC100128682 [Homo
sapiens]
Length = 299
Score = 26.9 bits (58), Expect = 6.5
Identities = 10/25 (40%), Positives = 12/25 (48%)
Query: 123 GKDSVCFTSKASAWHVPCKWQCQWT 147
G S TS S+W C W C W+
Sbjct: 4 GSVSAMRTSPKSSWPWCCSWSCAWS 28
>gi|169213267 PREDICTED: hypothetical protein LOC100128682 [Homo
sapiens]
Length = 299
Score = 26.9 bits (58), Expect = 6.5
Identities = 10/25 (40%), Positives = 12/25 (48%)
Query: 123 GKDSVCFTSKASAWHVPCKWQCQWT 147
G S TS S+W C W C W+
Sbjct: 4 GSVSAMRTSPKSSWPWCCSWSCAWS 28
>gi|21040326 SON DNA-binding protein isoform F [Homo sapiens]
Length = 2426
Score = 26.9 bits (58), Expect = 6.5
Identities = 19/59 (32%), Positives = 27/59 (45%), Gaps = 4/59 (6%)
Query: 12 EATWLLELSGLSLKGRCIRAKTQPSSPPIRAALGLPLCQQNLWIA----ADGVSQLSGP 66
EAT +LEL G + + QPS + GLP + L ++ A G +L GP
Sbjct: 541 EATMVLELPGQPVATTALELPGQPSVTGVPELPGLPSATRALELSGQPVATGALELPGP 599
>gi|21040314 SON DNA-binding protein isoform B [Homo sapiens]
Length = 2303
Score = 26.9 bits (58), Expect = 6.5
Identities = 19/59 (32%), Positives = 27/59 (45%), Gaps = 4/59 (6%)
Query: 12 EATWLLELSGLSLKGRCIRAKTQPSSPPIRAALGLPLCQQNLWIA----ADGVSQLSGP 66
EAT +LEL G + + QPS + GLP + L ++ A G +L GP
Sbjct: 541 EATMVLELPGQPVATTALELPGQPSVTGVPELPGLPSATRALELSGQPVATGALELPGP 599
>gi|156766050 AHNAK nucleoprotein 2 [Homo sapiens]
Length = 5795
Score = 26.9 bits (58), Expect = 6.5
Identities = 13/33 (39%), Positives = 19/33 (57%)
Query: 21 GLSLKGRCIRAKTQPSSPPIRAALGLPLCQQNL 53
G+S G+ I+A S+P + A L LP Q +L
Sbjct: 1009 GVSAPGKSIKALVDVSAPKVEADLSLPSMQGDL 1041
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.321 0.135 0.467
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,204,252
Number of Sequences: 37866
Number of extensions: 336911
Number of successful extensions: 678
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 649
Number of HSP's gapped (non-prelim): 40
length of query: 150
length of database: 18,247,518
effective HSP length: 93
effective length of query: 57
effective length of database: 14,725,980
effective search space: 839380860
effective search space used: 839380860
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 57 (26.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.