Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

BLASTP matches in selected species for COL4A5 - GI:15890088

The following table provides the supporting data for the comparative genomics plot for this protein. Select the protein identifier to see the matching RefSeq entry at NCBI. Searches at NCBI may reflect newer proteins sets or multiple strains of that species.

Species          Protein        Score Size(aa) Description

Self-match       15890088        3733   1688   type IV collagen alpha 5 isoform 3 pr...
M. musculus      253683445       3441   1691   collagen, type IV, alpha 5 
D. rerio         189521702       2360   1684   PREDICTED: collagen, type IV, alpha 1...
C. intestinalis  198416097       1573   1831   PREDICTED: similar to collagen, type ...
S. purpuratus    47550915        1328   1752   3 alpha procollagen 
D. melanogaster  24581820        1362   1779   Collagen type IV CG4145-PA, isoform A...
C. elegans       17568911        1584   1758   LEThal family member (let-2) 
A. thaliana      15240817         122   1504   glycine/proline-rich protein 
S. cerevisiae    6323370           67    817   Proline-rich actin-associated protein...
E. coli          89107502          30    362   minor lipoprotein 
A. pernix        118431852         43    235   30S ribosomal protein S6e 

Search results were obtained with NCBI BLAST and RefSeq entries.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press