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Search of human proteins with 158634472
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|158634472 ADP-ribosyltransferase 1 [Homo sapiens]
(327 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|158634472 ADP-ribosyltransferase 1 [Homo sapiens] 674 0.0
gi|118640870 ADP-ribosyltransferase 5 precursor [Homo sapiens] 164 8e-41
gi|30089992 ADP-ribosyltransferase 5 precursor [Homo sapiens] 164 8e-41
gi|61835134 ADP-ribosyltransferase 4 precursor [Homo sapiens] 142 5e-34
gi|194097382 ADP-ribosyltransferase 3 isoform c [Homo sapiens] 100 2e-21
gi|194097380 ADP-ribosyltransferase 3 isoform a [Homo sapiens] 100 2e-21
gi|21361167 ADP-ribosyltransferase 3 isoform b [Homo sapiens] 100 2e-21
gi|7662260 kelch repeat and BTB (POZ) domain containing 11 [Homo... 32 0.59
gi|9506689 exosome component 4 [Homo sapiens] 32 1.0
gi|209571519 cysteine rich BMP regulator 2 isoform 1 [Homo sapiens] 30 2.2
gi|209862765 RUN and SH3 domain containing 2 [Homo sapiens] 30 3.8
gi|55741719 RUN and SH3 domain containing 2 [Homo sapiens] 30 3.8
gi|45439367 gap junction protein, gamma 2, 47kDa [Homo sapiens] 29 5.0
gi|116256445 nuclear receptor co-repressor 2 isoform 2 [Homo sap... 29 6.5
gi|116256453 nuclear receptor co-repressor 2 isoform 1 [Homo sap... 29 6.5
gi|239757343 PREDICTED: hypothetical protein XP_002345253 [Homo ... 28 8.5
gi|119220585 apical early endosomal glycoprotein precursor [Homo... 28 8.5
>gi|158634472 ADP-ribosyltransferase 1 [Homo sapiens]
Length = 327
Score = 674 bits (1738), Expect = 0.0
Identities = 327/327 (100%), Positives = 327/327 (100%)
Query: 1 MQMPAMMSLLLVSVGLMEALQAQSHPITRRDLFSQEIQLDMALASFDDQYAGCAAAMTAA 60
MQMPAMMSLLLVSVGLMEALQAQSHPITRRDLFSQEIQLDMALASFDDQYAGCAAAMTAA
Sbjct: 1 MQMPAMMSLLLVSVGLMEALQAQSHPITRRDLFSQEIQLDMALASFDDQYAGCAAAMTAA 60
Query: 61 LPDLNHTEFQANQVYADSWTLASSQWQERQARWPEWSLSPTRPSPPPLGFRDEHGVALLA 120
LPDLNHTEFQANQVYADSWTLASSQWQERQARWPEWSLSPTRPSPPPLGFRDEHGVALLA
Sbjct: 61 LPDLNHTEFQANQVYADSWTLASSQWQERQARWPEWSLSPTRPSPPPLGFRDEHGVALLA 120
Query: 121 YTANSPLHKEFNAAVREAGRSRAHYLHHFSFKTLHFLLTEALQLLGSGQRPPRCHQVFRG 180
YTANSPLHKEFNAAVREAGRSRAHYLHHFSFKTLHFLLTEALQLLGSGQRPPRCHQVFRG
Sbjct: 121 YTANSPLHKEFNAAVREAGRSRAHYLHHFSFKTLHFLLTEALQLLGSGQRPPRCHQVFRG 180
Query: 181 VHGLRFRPAGPRATVRLGGFASASLKHVAAQQFGEDTFFGIWTCLGAPIKGYSFFPGEEE 240
VHGLRFRPAGPRATVRLGGFASASLKHVAAQQFGEDTFFGIWTCLGAPIKGYSFFPGEEE
Sbjct: 181 VHGLRFRPAGPRATVRLGGFASASLKHVAAQQFGEDTFFGIWTCLGAPIKGYSFFPGEEE 240
Query: 241 VLIPPFETFQVINASRLAQGPARIYLRALGKHSTYNCEYIKDKKCKSGPCHLDNSAMGQS 300
VLIPPFETFQVINASRLAQGPARIYLRALGKHSTYNCEYIKDKKCKSGPCHLDNSAMGQS
Sbjct: 241 VLIPPFETFQVINASRLAQGPARIYLRALGKHSTYNCEYIKDKKCKSGPCHLDNSAMGQS 300
Query: 301 PLSAVWSLLLLLWFLVVRAFPDGPGLL 327
PLSAVWSLLLLLWFLVVRAFPDGPGLL
Sbjct: 301 PLSAVWSLLLLLWFLVVRAFPDGPGLL 327
>gi|118640870 ADP-ribosyltransferase 5 precursor [Homo sapiens]
Length = 291
Score = 164 bits (416), Expect = 8e-41
Identities = 116/295 (39%), Positives = 153/295 (51%), Gaps = 35/295 (11%)
Query: 5 AMMSLLLVSVGLMEALQAQSHPITRRDLFSQEIQLDMALASFDDQYAGCAAAMTAALPDL 64
A + + L S+GL QAQ+ PI + L +A +FDD Y GCA M L
Sbjct: 4 AALMIALGSLGL-HTWQAQAVPI---------LPLGLAPDTFDDTYVGCAEEMEEKAAPL 53
Query: 65 NHTEFQANQVYADSWTLASSQWQERQARWPEWSLSPTRPSPPPLGFRDEHGVALLAYTAN 124
E + + +SW A W++++ R P GF+ ++G+A++ YT +
Sbjct: 54 LKEEMAHHALLRESWEAAQETWEDKR-----------RGLTLPPGFKAQNGIAIMVYTNS 102
Query: 125 S-PLHKEFNAAVREAGRSRAHYLHHFSFKTLHFLLTEALQLL-GSG--QRPPRCHQVFRG 180
S L+ E N AVR G SR Y+ HF FK LHF L ALQLL GSG R P VFRG
Sbjct: 103 SNTLYWELNQAVRTGGGSRELYMRHFPFKALHFYLIRALQLLRGSGGCSRGPG-EVVFRG 161
Query: 181 VHGLRFRPAGPRATVRLGGFASASLKHVAAQQFGEDTFFGIWTCLGAPIKGYSFFPGEEE 240
V LRF P +VRLG FAS+SL A +FG T F + TC GAPI+ +S FP E E
Sbjct: 162 VGSLRFEPKRLGDSVRLGQFASSSLDKAVAHRFGNATLFSLTTCFGAPIQAFSVFPKERE 221
Query: 241 VLIPPFETFQVINASRLAQGPARIYLRALGKHST---YNCEYI---KDKKCKSGP 289
VLIPP E F V +R +Q A+ + + T +NC Y+ K + C S P
Sbjct: 222 VLIPPHEVFLV---TRFSQDGAQSLVTLWSYNQTCSHFNCAYLGGEKRRGCVSAP 273
>gi|30089992 ADP-ribosyltransferase 5 precursor [Homo sapiens]
Length = 291
Score = 164 bits (416), Expect = 8e-41
Identities = 116/295 (39%), Positives = 153/295 (51%), Gaps = 35/295 (11%)
Query: 5 AMMSLLLVSVGLMEALQAQSHPITRRDLFSQEIQLDMALASFDDQYAGCAAAMTAALPDL 64
A + + L S+GL QAQ+ PI + L +A +FDD Y GCA M L
Sbjct: 4 AALMIALGSLGL-HTWQAQAVPI---------LPLGLAPDTFDDTYVGCAEEMEEKAAPL 53
Query: 65 NHTEFQANQVYADSWTLASSQWQERQARWPEWSLSPTRPSPPPLGFRDEHGVALLAYTAN 124
E + + +SW A W++++ R P GF+ ++G+A++ YT +
Sbjct: 54 LKEEMAHHALLRESWEAAQETWEDKR-----------RGLTLPPGFKAQNGIAIMVYTNS 102
Query: 125 S-PLHKEFNAAVREAGRSRAHYLHHFSFKTLHFLLTEALQLL-GSG--QRPPRCHQVFRG 180
S L+ E N AVR G SR Y+ HF FK LHF L ALQLL GSG R P VFRG
Sbjct: 103 SNTLYWELNQAVRTGGGSRELYMRHFPFKALHFYLIRALQLLRGSGGCSRGPG-EVVFRG 161
Query: 181 VHGLRFRPAGPRATVRLGGFASASLKHVAAQQFGEDTFFGIWTCLGAPIKGYSFFPGEEE 240
V LRF P +VRLG FAS+SL A +FG T F + TC GAPI+ +S FP E E
Sbjct: 162 VGSLRFEPKRLGDSVRLGQFASSSLDKAVAHRFGNATLFSLTTCFGAPIQAFSVFPKERE 221
Query: 241 VLIPPFETFQVINASRLAQGPARIYLRALGKHST---YNCEYI---KDKKCKSGP 289
VLIPP E F V +R +Q A+ + + T +NC Y+ K + C S P
Sbjct: 222 VLIPPHEVFLV---TRFSQDGAQSLVTLWSYNQTCSHFNCAYLGGEKRRGCVSAP 273
>gi|61835134 ADP-ribosyltransferase 4 precursor [Homo sapiens]
Length = 314
Score = 142 bits (357), Expect = 5e-34
Identities = 95/261 (36%), Positives = 129/261 (49%), Gaps = 25/261 (9%)
Query: 36 EIQLDMALASFDDQYAGCAAAMTAALP--DLNHTEFQANQVYADSWTLASSQWQERQARW 93
+I D A SFDDQY GC+ + L D + +A + Y W A W +
Sbjct: 52 KIDFDFAPGSFDDQYQGCSKQVMEKLTQGDYFTKDIEAQKNYFRMWQKAHLAWLNQGKVL 111
Query: 94 PEWSLSPTRPSPPPLGFRDEHGVALLAYTANSPLHKEFNAAVREAGRSRAHYLHHFSFKT 153
P+ H VA+L YT NS +H +F A+ R+ Y F FK
Sbjct: 112 PQ-------------NMTTTHAVAILFYTLNSNVHSDFTRAMASVARTPQQYERSFHFKY 158
Query: 154 LHFLLTEALQLLGSG---QRPPRCHQVFRGVHGLRFRPAGPRATVRLGGFASASLKHVAA 210
LH+ LT A+QLL + C++V + F A AT+R G F S SL A
Sbjct: 159 LHYYLTSAIQLLRKDSIMENGTLCYEVHYRTKDVHFN-AYTGATIRFGQFLSTSLLKEEA 217
Query: 211 QQFGEDTFFGIWTCLGAPIKGYSFFPGEEEVLIPPFETFQVINASRLAQGPARIYLRALG 270
Q+FG T F I+TCLGAP++ +F ++EVLIPP+E F+VIN S +G + LR+ G
Sbjct: 218 QEFGNQTLFTIFTCLGAPVQ---YFSLKKEVLIPPYELFKVINMSYHPRGD-WLQLRSTG 273
Query: 271 KHSTYNCEYIK--DKKCKSGP 289
STYNC+ +K KKC P
Sbjct: 274 NLSTYNCQLLKASSKKCIPDP 294
>gi|194097382 ADP-ribosyltransferase 3 isoform c [Homo sapiens]
Length = 367
Score = 100 bits (248), Expect = 2e-21
Identities = 83/266 (31%), Positives = 123/266 (46%), Gaps = 28/266 (10%)
Query: 31 DLFSQEIQ-LDMALASFDDQYAGCAAAMTAA-LPDLNHTEFQANQVYADSWTLASSQWQE 88
D+F + + LDMA +FDD+Y C M +P L E ++Q W A ++W
Sbjct: 20 DIFQVKAEVLDMADNAFDDEYLKCTDRMEIKYVPQLLKEEKASHQQLDTVWENAKAKWAA 79
Query: 89 RQARWPEWSLSPTRPSPPPLGFRDEHGVALLAYTANS----PLHKEFNAAVREAGRSRAH 144
R+ + P+ F+D HG+AL+AY + + P + F+ AV+ AG+SR
Sbjct: 80 RKTQ-----------IFLPMNFKDNHGIALMAYISEAQEQTPFYHLFSEAVKMAGQSRED 128
Query: 145 YLHHFSFKTLHFLLTEALQLLGSGQRPPRCHQVFRGVHGLRFRPAGPRATVRLGGFASAS 204
Y++ F FK HF LT ALQLL V+R G F G + F +
Sbjct: 129 YIYGFQFKAFHFYLTRALQLLRKPCEASSKTVVYRTSQGTSFTFGG----LNQARFGHFT 184
Query: 205 LKHVAAQQFGED--TFFGIWTCLGAPIKGYSFFPGEEEVLIPPFETFQVINASRLAQGPA 262
L + A Q D T I+TCLG I+ + E LIP E FQV S+ G
Sbjct: 185 LAYSAKPQAANDQLTVLSIYTCLGVDIENFLDKESERITLIPLNEVFQV---SQEGAG-N 240
Query: 263 RIYLRALGKH-STYNCEYIKDKKCKS 287
+ L+++ K S Y C ++ K ++
Sbjct: 241 NLILQSINKTCSHYECAFLGGLKTEN 266
>gi|194097380 ADP-ribosyltransferase 3 isoform a [Homo sapiens]
Length = 389
Score = 100 bits (248), Expect = 2e-21
Identities = 83/266 (31%), Positives = 123/266 (46%), Gaps = 28/266 (10%)
Query: 31 DLFSQEIQ-LDMALASFDDQYAGCAAAMTAA-LPDLNHTEFQANQVYADSWTLASSQWQE 88
D+F + + LDMA +FDD+Y C M +P L E ++Q W A ++W
Sbjct: 20 DIFQVKAEVLDMADNAFDDEYLKCTDRMEIKYVPQLLKEEKASHQQLDTVWENAKAKWAA 79
Query: 89 RQARWPEWSLSPTRPSPPPLGFRDEHGVALLAYTANS----PLHKEFNAAVREAGRSRAH 144
R+ + P+ F+D HG+AL+AY + + P + F+ AV+ AG+SR
Sbjct: 80 RKTQ-----------IFLPMNFKDNHGIALMAYISEAQEQTPFYHLFSEAVKMAGQSRED 128
Query: 145 YLHHFSFKTLHFLLTEALQLLGSGQRPPRCHQVFRGVHGLRFRPAGPRATVRLGGFASAS 204
Y++ F FK HF LT ALQLL V+R G F G + F +
Sbjct: 129 YIYGFQFKAFHFYLTRALQLLRKPCEASSKTVVYRTSQGTSFTFGG----LNQARFGHFT 184
Query: 205 LKHVAAQQFGED--TFFGIWTCLGAPIKGYSFFPGEEEVLIPPFETFQVINASRLAQGPA 262
L + A Q D T I+TCLG I+ + E LIP E FQV S+ G
Sbjct: 185 LAYSAKPQAANDQLTVLSIYTCLGVDIENFLDKESERITLIPLNEVFQV---SQEGAG-N 240
Query: 263 RIYLRALGKH-STYNCEYIKDKKCKS 287
+ L+++ K S Y C ++ K ++
Sbjct: 241 NLILQSINKTCSHYECAFLGGLKTEN 266
>gi|21361167 ADP-ribosyltransferase 3 isoform b [Homo sapiens]
Length = 378
Score = 100 bits (248), Expect = 2e-21
Identities = 83/266 (31%), Positives = 123/266 (46%), Gaps = 28/266 (10%)
Query: 31 DLFSQEIQ-LDMALASFDDQYAGCAAAMTAA-LPDLNHTEFQANQVYADSWTLASSQWQE 88
D+F + + LDMA +FDD+Y C M +P L E ++Q W A ++W
Sbjct: 20 DIFQVKAEVLDMADNAFDDEYLKCTDRMEIKYVPQLLKEEKASHQQLDTVWENAKAKWAA 79
Query: 89 RQARWPEWSLSPTRPSPPPLGFRDEHGVALLAYTANS----PLHKEFNAAVREAGRSRAH 144
R+ + P+ F+D HG+AL+AY + + P + F+ AV+ AG+SR
Sbjct: 80 RKTQ-----------IFLPMNFKDNHGIALMAYISEAQEQTPFYHLFSEAVKMAGQSRED 128
Query: 145 YLHHFSFKTLHFLLTEALQLLGSGQRPPRCHQVFRGVHGLRFRPAGPRATVRLGGFASAS 204
Y++ F FK HF LT ALQLL V+R G F G + F +
Sbjct: 129 YIYGFQFKAFHFYLTRALQLLRKPCEASSKTVVYRTSQGTSFTFGG----LNQARFGHFT 184
Query: 205 LKHVAAQQFGED--TFFGIWTCLGAPIKGYSFFPGEEEVLIPPFETFQVINASRLAQGPA 262
L + A Q D T I+TCLG I+ + E LIP E FQV S+ G
Sbjct: 185 LAYSAKPQAANDQLTVLSIYTCLGVDIENFLDKESERITLIPLNEVFQV---SQEGAG-N 240
Query: 263 RIYLRALGKH-STYNCEYIKDKKCKS 287
+ L+++ K S Y C ++ K ++
Sbjct: 241 NLILQSINKTCSHYECAFLGGLKTEN 266
>gi|7662260 kelch repeat and BTB (POZ) domain containing 11 [Homo
sapiens]
Length = 623
Score = 32.3 bits (72), Expect = 0.59
Identities = 31/106 (29%), Positives = 42/106 (39%), Gaps = 7/106 (6%)
Query: 100 PTRPSPPPLGFRDEHGVALLAYTANSP---LHKEFNAAVREAGRSRAHY----LHHFSFK 152
P P+P P GF +G L + HK AA + R+RA + S
Sbjct: 123 PGEPAPVPPGFGAVYGEPDLVLEVSGRRLRAHKAVLAARSDYFRARASRDVLRVQGVSLT 182
Query: 153 TLHFLLTEALQLLGSGQRPPRCHQVFRGVHGLRFRPAGPRATVRLG 198
L LL +A +G RP +V G L+ A RAT +G
Sbjct: 183 ALRLLLADAYSGRMAGVRPDNVAEVVAGARRLQLPGAAQRATDAVG 228
>gi|9506689 exosome component 4 [Homo sapiens]
Length = 245
Score = 31.6 bits (70), Expect = 1.0
Identities = 39/152 (25%), Positives = 59/152 (38%), Gaps = 21/152 (13%)
Query: 19 ALQAQSHPITRRDLFSQEIQLDMALASFDDQYAGCAAAMTAALPD----LNHTEFQANQV 74
A+ Q HP ++ D++ Q +Q D YA C A T A+ D + +
Sbjct: 110 AILTQLHPRSQIDIYVQVLQAD------GGTYAACVNAATLAVLDAGIPMRDFVCACSAG 163
Query: 75 YADSWTLASSQWQERQARWPEWSLSPTRPSPPPLGFRDEHGVALLAYTANSPLHKEFNAA 134
+ D LA E A P+ +L+ S +ALL A LH++
Sbjct: 164 FVDGTALADLSHVEEAAGGPQLALALLPASGQ---------IALLEMDAR--LHEDHLER 212
Query: 135 VREAGRSRAHYLHHFSFKTLHFLLTEALQLLG 166
V EA A +H + + + EA LLG
Sbjct: 213 VLEAAAQAARDVHTLLDRVVRQHVREASILLG 244
>gi|209571519 cysteine rich BMP regulator 2 isoform 1 [Homo sapiens]
Length = 1503
Score = 30.4 bits (67), Expect = 2.2
Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
Query: 272 HSTYNCEYIKDKKCKSGP--CHLDNSAMGQSPLSAVWSLLLLLWFLVVRAFPDG 323
H +C Y+ K C SG H+ N G+S ++ + +LL + VR DG
Sbjct: 1167 HFQGSCSYVLAKDCHSGDFSVHVTNDDRGRSGVAWTQEVAVLLGDMAVRLLQDG 1220
>gi|209862765 RUN and SH3 domain containing 2 [Homo sapiens]
Length = 1516
Score = 29.6 bits (65), Expect = 3.8
Identities = 16/37 (43%), Positives = 18/37 (48%)
Query: 158 LTEALQLLGSGQRPPRCHQVFRGVHGLRFRPAGPRAT 194
L + LLG PP QV +G H PAG RAT
Sbjct: 602 LGPGMDLLGPDPSPPWSTQVCQGPHSSEMPPAGLRAT 638
>gi|55741719 RUN and SH3 domain containing 2 [Homo sapiens]
Length = 1516
Score = 29.6 bits (65), Expect = 3.8
Identities = 16/37 (43%), Positives = 18/37 (48%)
Query: 158 LTEALQLLGSGQRPPRCHQVFRGVHGLRFRPAGPRAT 194
L + LLG PP QV +G H PAG RAT
Sbjct: 602 LGPGMDLLGPDPSPPWSTQVCQGPHSSEMPPAGLRAT 638
>gi|45439367 gap junction protein, gamma 2, 47kDa [Homo sapiens]
Length = 439
Score = 29.3 bits (64), Expect = 5.0
Identities = 39/135 (28%), Positives = 48/135 (35%), Gaps = 20/135 (14%)
Query: 81 LASSQWQERQARWPEWSLSPTRPSPPPLGFRDEHGVALLAYTANSPLHKEFNAAVREAGR 140
L S+Q R R P S P PPP F A A +++ VR A R
Sbjct: 291 LGSAQDAVRGRRGPPASAPAPAPRPPPCAFP--------AAAAGLACPPDYSLVVRAAER 342
Query: 141 SRAHYLHHFSFKTLHFLLTEALQLLGSGQRPPRCHQVFRGVHGLRFRPAGPRATVRLGGF 200
+RAH + L ALQ L G + GL PA R R G
Sbjct: 343 ARAHDQN---------LANLALQALRDGAAAGDRDRDSSPCVGL---PAASRGPPRAGAP 390
Query: 201 ASASLKHVAAQQFGE 215
AS + +A GE
Sbjct: 391 ASRTGSATSAGTVGE 405
>gi|116256445 nuclear receptor co-repressor 2 isoform 2 [Homo sapiens]
Length = 2462
Score = 28.9 bits (63), Expect = 6.5
Identities = 21/81 (25%), Positives = 33/81 (40%), Gaps = 1/81 (1%)
Query: 61 LPDLNHTEFQANQVYADSWTLASSQWQERQARWPEWSLSPTRPSPPPLGFRDEHGVALLA 120
L + +H Q S+ A + R+A+ + +P P PP + + L
Sbjct: 1336 LKEQHHIRGSITQGIPRSYVEAQEDYLRREAKLLKREGTPP-PPPPSRDLTEAYKTQALG 1394
Query: 121 YTANSPLHKEFNAAVREAGRS 141
P H+ A V+EAGRS
Sbjct: 1395 PLKLKPAHEGLVATVKEAGRS 1415
>gi|116256453 nuclear receptor co-repressor 2 isoform 1 [Homo sapiens]
Length = 2524
Score = 28.9 bits (63), Expect = 6.5
Identities = 21/81 (25%), Positives = 33/81 (40%), Gaps = 1/81 (1%)
Query: 61 LPDLNHTEFQANQVYADSWTLASSQWQERQARWPEWSLSPTRPSPPPLGFRDEHGVALLA 120
L + +H Q S+ A + R+A+ + +P P PP + + L
Sbjct: 1352 LKEQHHIRGSITQGIPRSYVEAQEDYLRREAKLLKREGTPP-PPPPSRDLTEAYKTQALG 1410
Query: 121 YTANSPLHKEFNAAVREAGRS 141
P H+ A V+EAGRS
Sbjct: 1411 PLKLKPAHEGLVATVKEAGRS 1431
>gi|239757343 PREDICTED: hypothetical protein XP_002345253 [Homo
sapiens]
Length = 521
Score = 28.5 bits (62), Expect = 8.5
Identities = 14/41 (34%), Positives = 16/41 (39%)
Query: 167 SGQRPPRCHQVFRGVHGLRFRPAGPRATVRLGGFASASLKH 207
SG +P G H R RP GP LG A +H
Sbjct: 216 SGHQPAGPTGTCSGTHSARLRPGGPHTRGMLGSLRGARSQH 256
>gi|119220585 apical early endosomal glycoprotein precursor [Homo
sapiens]
Length = 1137
Score = 28.5 bits (62), Expect = 8.5
Identities = 23/80 (28%), Positives = 37/80 (46%), Gaps = 6/80 (7%)
Query: 238 EEEVLIPPFETFQVINASRLAQGPARIYLRALGKHSTYNCEYIKDKKCKSGPCHLDNSAM 297
E +V + + FQ++ + L PA LG + + EY+ + C+ N+A
Sbjct: 1016 EAQVEVASAKEFQIVFEATLGGQPA------LGPIALDDVEYLAGQHCQQPAPSPGNTAA 1069
Query: 298 GQSPLSAVWSLLLLLWFLVV 317
S + V S LLLL LV+
Sbjct: 1070 PGSVPAVVGSALLLLMLLVL 1089
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.323 0.136 0.431
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,848,982
Number of Sequences: 37866
Number of extensions: 632135
Number of successful extensions: 1631
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 1602
Number of HSP's gapped (non-prelim): 17
length of query: 327
length of database: 18,247,518
effective HSP length: 103
effective length of query: 224
effective length of database: 14,347,320
effective search space: 3213799680
effective search space used: 3213799680
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.