Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

BLASTP matches in selected species for COL28A1 - GI:154759255

The following table provides the supporting data for the comparative genomics plot for this protein. Select the protein identifier to see the matching RefSeq entry at NCBI. Searches at NCBI may reflect newer proteins sets or multiple strains of that species.

Species          Protein        Score Size(aa) Description

Self-match       154759255       2345   1125   collagen, type XXVIII precursor
M. musculus      83745131        2033   1141   collagen, type XXVIII, alpha 1 
D. rerio         229577024       1004   1208   collagen type XXVIII alpha 1 a 
C. intestinalis  198427839        404   1477   PREDICTED: similar to Col2a1b protein...
S. purpuratus    115911557        446   1772   PREDICTED: similar to 6a fibrillar co...
D. melanogaster  24581820         402   1779   Collagen type IV CG4145-PA, isoform A...
C. elegans       17568911         407   1758   LEThal family member (let-2) 
A. thaliana      42572805         130    579   unknown protein 
S. cerevisiae    42742305          49    199   Protein of unknown function; may inte...
E. coli          89110780          29    178   Single-stranded DNA-binding protein 
A. pernix        118431327         33    163   ribonuclease P protein component 4 

Search results were obtained with NCBI BLAST and RefSeq entries.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press