Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

BLASTP matches in selected species for COL4A1 - GI:148536825

The following table provides the supporting data for the comparative genomics plot for this protein. Select the protein identifier to see the matching RefSeq entry at NCBI. Searches at NCBI may reflect newer proteins sets or multiple strains of that species.

Species          Protein        Score Size(aa) Description

Self-match       148536825       3648   1669   alpha 1 type IV collagen preproprotei...
M. musculus      161484654       3351   1669   collagen, type IV, alpha 1 
D. rerio         189525448       2144   1687   PREDICTED: collagen, type IV, alpha 5...
C. intestinalis  198416097       1484   1831   PREDICTED: similar to collagen, type ...
S. purpuratus    47550915        1477   1752   3 alpha procollagen 
D. melanogaster  24581820        1358   1779   Collagen type IV CG4145-PA, isoform A...
C. elegans       17568911        1560   1758   LEThal family member (let-2) 
A. thaliana      42572805         125    579   unknown protein 
S. cerevisiae    6323145           50    476   Component of the commitment complex, ...
E. coli          89107502          31    362   minor lipoprotein 
A. pernix        118431852         38    235   30S ribosomal protein S6e 

Search results were obtained with NCBI BLAST and RefSeq entries.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press