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Search of human proteins with 148234741
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|148234741 G protein-coupled receptor 89C [Homo sapiens]
(320 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|148234741 G protein-coupled receptor 89C [Homo sapiens] 624 e-179
gi|148229509 G protein-coupled receptor 89A isoform 2 [Homo sapi... 618 e-177
gi|148228819 G protein-coupled receptor 89A isoform 1 [Homo sapi... 618 e-177
gi|7706704 G protein-coupled receptor 89B [Homo sapiens] 618 e-177
gi|52426789 oxoglutarate (alpha-ketoglutarate) receptor 1 [Homo ... 32 0.75
gi|156766084 transmembrane protein 16C [Homo sapiens] 31 1.3
gi|145275216 kinesin family member 2B [Homo sapiens] 30 3.7
gi|67089167 LETM1 domain containing 1 isoform 2 [Homo sapiens] 29 6.4
gi|67089165 LETM1 domain containing 1 isoform 1 [Homo sapiens] 29 6.4
gi|166999613 FBJ murine osteosarcoma viral oncogene homolog B is... 29 6.4
gi|70995130 cholinergic receptor, nicotinic, alpha 9 precursor [... 28 8.3
>gi|148234741 G protein-coupled receptor 89C [Homo sapiens]
Length = 320
Score = 624 bits (1609), Expect = e-179
Identities = 320/320 (100%), Positives = 320/320 (100%)
Query: 1 MFLGILSIEQLISRVGVIGVTLMALLSGFGAVNCPYTYMSYFLRNVTDTDILALERRLLQ 60
MFLGILSIEQLISRVGVIGVTLMALLSGFGAVNCPYTYMSYFLRNVTDTDILALERRLLQ
Sbjct: 1 MFLGILSIEQLISRVGVIGVTLMALLSGFGAVNCPYTYMSYFLRNVTDTDILALERRLLQ 60
Query: 61 TMDMIISKKKRMAMARRTMFQKGEVHNKPSGFWGMIKSVTTSASGSENLTLIQQEVDALE 120
TMDMIISKKKRMAMARRTMFQKGEVHNKPSGFWGMIKSVTTSASGSENLTLIQQEVDALE
Sbjct: 61 TMDMIISKKKRMAMARRTMFQKGEVHNKPSGFWGMIKSVTTSASGSENLTLIQQEVDALE 120
Query: 121 ELSRQLFLETADLYATKERIEYSKTFKGKYFNFLGYFFSIYCVWKIFMATINIVFDRVGK 180
ELSRQLFLETADLYATKERIEYSKTFKGKYFNFLGYFFSIYCVWKIFMATINIVFDRVGK
Sbjct: 121 ELSRQLFLETADLYATKERIEYSKTFKGKYFNFLGYFFSIYCVWKIFMATINIVFDRVGK 180
Query: 181 TDPVTRGIEITVNYLGIQFDVKFWSQHISFILVGIIIVTSIRGLLITLTKFFYAISSSKS 240
TDPVTRGIEITVNYLGIQFDVKFWSQHISFILVGIIIVTSIRGLLITLTKFFYAISSSKS
Sbjct: 181 TDPVTRGIEITVNYLGIQFDVKFWSQHISFILVGIIIVTSIRGLLITLTKFFYAISSSKS 240
Query: 241 SNVIVLLLAQIMGMYFVSSVLLIRMSMPLEYRTIITEVLGELQFNFYHRWFDVIFLVSAL 300
SNVIVLLLAQIMGMYFVSSVLLIRMSMPLEYRTIITEVLGELQFNFYHRWFDVIFLVSAL
Sbjct: 241 SNVIVLLLAQIMGMYFVSSVLLIRMSMPLEYRTIITEVLGELQFNFYHRWFDVIFLVSAL 300
Query: 301 SSILFLYLAHKQAPEKQMAP 320
SSILFLYLAHKQAPEKQMAP
Sbjct: 301 SSILFLYLAHKQAPEKQMAP 320
>gi|148229509 G protein-coupled receptor 89A isoform 2 [Homo
sapiens]
Length = 335
Score = 618 bits (1594), Expect = e-177
Identities = 317/317 (100%), Positives = 317/317 (100%)
Query: 4 GILSIEQLISRVGVIGVTLMALLSGFGAVNCPYTYMSYFLRNVTDTDILALERRLLQTMD 63
GILSIEQLISRVGVIGVTLMALLSGFGAVNCPYTYMSYFLRNVTDTDILALERRLLQTMD
Sbjct: 19 GILSIEQLISRVGVIGVTLMALLSGFGAVNCPYTYMSYFLRNVTDTDILALERRLLQTMD 78
Query: 64 MIISKKKRMAMARRTMFQKGEVHNKPSGFWGMIKSVTTSASGSENLTLIQQEVDALEELS 123
MIISKKKRMAMARRTMFQKGEVHNKPSGFWGMIKSVTTSASGSENLTLIQQEVDALEELS
Sbjct: 79 MIISKKKRMAMARRTMFQKGEVHNKPSGFWGMIKSVTTSASGSENLTLIQQEVDALEELS 138
Query: 124 RQLFLETADLYATKERIEYSKTFKGKYFNFLGYFFSIYCVWKIFMATINIVFDRVGKTDP 183
RQLFLETADLYATKERIEYSKTFKGKYFNFLGYFFSIYCVWKIFMATINIVFDRVGKTDP
Sbjct: 139 RQLFLETADLYATKERIEYSKTFKGKYFNFLGYFFSIYCVWKIFMATINIVFDRVGKTDP 198
Query: 184 VTRGIEITVNYLGIQFDVKFWSQHISFILVGIIIVTSIRGLLITLTKFFYAISSSKSSNV 243
VTRGIEITVNYLGIQFDVKFWSQHISFILVGIIIVTSIRGLLITLTKFFYAISSSKSSNV
Sbjct: 199 VTRGIEITVNYLGIQFDVKFWSQHISFILVGIIIVTSIRGLLITLTKFFYAISSSKSSNV 258
Query: 244 IVLLLAQIMGMYFVSSVLLIRMSMPLEYRTIITEVLGELQFNFYHRWFDVIFLVSALSSI 303
IVLLLAQIMGMYFVSSVLLIRMSMPLEYRTIITEVLGELQFNFYHRWFDVIFLVSALSSI
Sbjct: 259 IVLLLAQIMGMYFVSSVLLIRMSMPLEYRTIITEVLGELQFNFYHRWFDVIFLVSALSSI 318
Query: 304 LFLYLAHKQAPEKQMAP 320
LFLYLAHKQAPEKQMAP
Sbjct: 319 LFLYLAHKQAPEKQMAP 335
>gi|148228819 G protein-coupled receptor 89A isoform 1 [Homo
sapiens]
Length = 455
Score = 618 bits (1594), Expect = e-177
Identities = 317/317 (100%), Positives = 317/317 (100%)
Query: 4 GILSIEQLISRVGVIGVTLMALLSGFGAVNCPYTYMSYFLRNVTDTDILALERRLLQTMD 63
GILSIEQLISRVGVIGVTLMALLSGFGAVNCPYTYMSYFLRNVTDTDILALERRLLQTMD
Sbjct: 139 GILSIEQLISRVGVIGVTLMALLSGFGAVNCPYTYMSYFLRNVTDTDILALERRLLQTMD 198
Query: 64 MIISKKKRMAMARRTMFQKGEVHNKPSGFWGMIKSVTTSASGSENLTLIQQEVDALEELS 123
MIISKKKRMAMARRTMFQKGEVHNKPSGFWGMIKSVTTSASGSENLTLIQQEVDALEELS
Sbjct: 199 MIISKKKRMAMARRTMFQKGEVHNKPSGFWGMIKSVTTSASGSENLTLIQQEVDALEELS 258
Query: 124 RQLFLETADLYATKERIEYSKTFKGKYFNFLGYFFSIYCVWKIFMATINIVFDRVGKTDP 183
RQLFLETADLYATKERIEYSKTFKGKYFNFLGYFFSIYCVWKIFMATINIVFDRVGKTDP
Sbjct: 259 RQLFLETADLYATKERIEYSKTFKGKYFNFLGYFFSIYCVWKIFMATINIVFDRVGKTDP 318
Query: 184 VTRGIEITVNYLGIQFDVKFWSQHISFILVGIIIVTSIRGLLITLTKFFYAISSSKSSNV 243
VTRGIEITVNYLGIQFDVKFWSQHISFILVGIIIVTSIRGLLITLTKFFYAISSSKSSNV
Sbjct: 319 VTRGIEITVNYLGIQFDVKFWSQHISFILVGIIIVTSIRGLLITLTKFFYAISSSKSSNV 378
Query: 244 IVLLLAQIMGMYFVSSVLLIRMSMPLEYRTIITEVLGELQFNFYHRWFDVIFLVSALSSI 303
IVLLLAQIMGMYFVSSVLLIRMSMPLEYRTIITEVLGELQFNFYHRWFDVIFLVSALSSI
Sbjct: 379 IVLLLAQIMGMYFVSSVLLIRMSMPLEYRTIITEVLGELQFNFYHRWFDVIFLVSALSSI 438
Query: 304 LFLYLAHKQAPEKQMAP 320
LFLYLAHKQAPEKQMAP
Sbjct: 439 LFLYLAHKQAPEKQMAP 455
>gi|7706704 G protein-coupled receptor 89B [Homo sapiens]
Length = 455
Score = 618 bits (1594), Expect = e-177
Identities = 317/317 (100%), Positives = 317/317 (100%)
Query: 4 GILSIEQLISRVGVIGVTLMALLSGFGAVNCPYTYMSYFLRNVTDTDILALERRLLQTMD 63
GILSIEQLISRVGVIGVTLMALLSGFGAVNCPYTYMSYFLRNVTDTDILALERRLLQTMD
Sbjct: 139 GILSIEQLISRVGVIGVTLMALLSGFGAVNCPYTYMSYFLRNVTDTDILALERRLLQTMD 198
Query: 64 MIISKKKRMAMARRTMFQKGEVHNKPSGFWGMIKSVTTSASGSENLTLIQQEVDALEELS 123
MIISKKKRMAMARRTMFQKGEVHNKPSGFWGMIKSVTTSASGSENLTLIQQEVDALEELS
Sbjct: 199 MIISKKKRMAMARRTMFQKGEVHNKPSGFWGMIKSVTTSASGSENLTLIQQEVDALEELS 258
Query: 124 RQLFLETADLYATKERIEYSKTFKGKYFNFLGYFFSIYCVWKIFMATINIVFDRVGKTDP 183
RQLFLETADLYATKERIEYSKTFKGKYFNFLGYFFSIYCVWKIFMATINIVFDRVGKTDP
Sbjct: 259 RQLFLETADLYATKERIEYSKTFKGKYFNFLGYFFSIYCVWKIFMATINIVFDRVGKTDP 318
Query: 184 VTRGIEITVNYLGIQFDVKFWSQHISFILVGIIIVTSIRGLLITLTKFFYAISSSKSSNV 243
VTRGIEITVNYLGIQFDVKFWSQHISFILVGIIIVTSIRGLLITLTKFFYAISSSKSSNV
Sbjct: 319 VTRGIEITVNYLGIQFDVKFWSQHISFILVGIIIVTSIRGLLITLTKFFYAISSSKSSNV 378
Query: 244 IVLLLAQIMGMYFVSSVLLIRMSMPLEYRTIITEVLGELQFNFYHRWFDVIFLVSALSSI 303
IVLLLAQIMGMYFVSSVLLIRMSMPLEYRTIITEVLGELQFNFYHRWFDVIFLVSALSSI
Sbjct: 379 IVLLLAQIMGMYFVSSVLLIRMSMPLEYRTIITEVLGELQFNFYHRWFDVIFLVSALSSI 438
Query: 304 LFLYLAHKQAPEKQMAP 320
LFLYLAHKQAPEKQMAP
Sbjct: 439 LFLYLAHKQAPEKQMAP 455
>gi|52426789 oxoglutarate (alpha-ketoglutarate) receptor 1 [Homo
sapiens]
Length = 337
Score = 32.0 bits (71), Expect = 0.75
Identities = 22/104 (21%), Positives = 44/104 (42%)
Query: 207 HISFILVGIIIVTSIRGLLITLTKFFYAISSSKSSNVIVLLLAQIMGMYFVSSVLLIRMS 266
H ++ GII + G + ++ + + + KSS +I+L LA +Y S LI
Sbjct: 34 HYLPVIYGIIFLVGFPGNAVVISTYIFKMRPWKSSTIIMLNLACTDLLYLTSLPFLIHYY 93
Query: 267 MPLEYRTIITEVLGELQFNFYHRWFDVIFLVSALSSILFLYLAH 310
E + ++F+F+ + I ++ S + + H
Sbjct: 94 ASGENWIFGDFMCKFIRFSFHFNLYSSILFLTCFSIFRYCVIIH 137
>gi|156766084 transmembrane protein 16C [Homo sapiens]
Length = 981
Score = 31.2 bits (69), Expect = 1.3
Identities = 17/77 (22%), Positives = 41/77 (53%), Gaps = 4/77 (5%)
Query: 240 SSNVIVLLLAQIMGMYFVSSVLLIRMSMPLEYRTIITEVLGELQFNFYHRWFDVIFLVSA 299
SS+ + LL + G++F+ S+++ + + YR ++ E ++NF +++ +A
Sbjct: 540 SSDKVTRLLVSVSGIFFMISLVITAVFGVVVYRLVVMEQFASFKWNFIKQYWQFATSAAA 599
Query: 300 LS----SILFLYLAHKQ 312
+ I+ L LA+++
Sbjct: 600 VCINFIIIMLLNLAYEK 616
>gi|145275216 kinesin family member 2B [Homo sapiens]
Length = 673
Score = 29.6 bits (65), Expect = 3.7
Identities = 13/36 (36%), Positives = 27/36 (75%), Gaps = 1/36 (2%)
Query: 106 SENLTLIQQEVDALEELSRQLFLETADLYATKERIE 141
+ +L++++Q++DAL E+ ++L L ADL+ K ++E
Sbjct: 639 ARSLSILEQKIDALTEIQKKLKLLLADLH-VKSKVE 673
>gi|67089167 LETM1 domain containing 1 isoform 2 [Homo sapiens]
Length = 304
Score = 28.9 bits (63), Expect = 6.4
Identities = 32/125 (25%), Positives = 48/125 (38%), Gaps = 23/125 (18%)
Query: 143 SKTFKGKYFNFLG-YFFSIYCVWKIFMATINIVFDRVGKTDPVTRGIEITVNYLGIQFDV 201
+K GKY FLG +F Y ++ IFM + +++ K +
Sbjct: 8 TKAINGKYHRFLGRHFPRFYVLYTIFMKGLQMLWADAKKAR---------------RIKT 52
Query: 202 KFWSQHISFILVGIIIVTSIRGLLITLTK--FFYAISSSKSSNVIVLLLAQIMGMYFVSS 259
W +I F + + +R +TK F IS +N +V LL MY
Sbjct: 53 NMWKHNIKFHQLPYREMEHLRQFRQDVTKCLFLGIISIPPFANYLVFLL-----MYLFPR 107
Query: 260 VLLIR 264
LLIR
Sbjct: 108 QLLIR 112
>gi|67089165 LETM1 domain containing 1 isoform 1 [Homo sapiens]
Length = 360
Score = 28.9 bits (63), Expect = 6.4
Identities = 32/125 (25%), Positives = 48/125 (38%), Gaps = 23/125 (18%)
Query: 143 SKTFKGKYFNFLG-YFFSIYCVWKIFMATINIVFDRVGKTDPVTRGIEITVNYLGIQFDV 201
+K GKY FLG +F Y ++ IFM + +++ K +
Sbjct: 64 TKAINGKYHRFLGRHFPRFYVLYTIFMKGLQMLWADAKKAR---------------RIKT 108
Query: 202 KFWSQHISFILVGIIIVTSIRGLLITLTK--FFYAISSSKSSNVIVLLLAQIMGMYFVSS 259
W +I F + + +R +TK F IS +N +V LL MY
Sbjct: 109 NMWKHNIKFHQLPYREMEHLRQFRQDVTKCLFLGIISIPPFANYLVFLL-----MYLFPR 163
Query: 260 VLLIR 264
LLIR
Sbjct: 164 QLLIR 168
>gi|166999613 FBJ murine osteosarcoma viral oncogene homolog B
isoform 1 [Homo sapiens]
Length = 338
Score = 28.9 bits (63), Expect = 6.4
Identities = 14/31 (45%), Positives = 19/31 (61%)
Query: 112 IQQEVDALEELSRQLFLETADLYATKERIEY 142
+Q E D LEE +L E A+L KER+E+
Sbjct: 183 LQAETDQLEEEKAELESEIAELQKEKERLEF 213
>gi|70995130 cholinergic receptor, nicotinic, alpha 9 precursor
[Homo sapiens]
Length = 479
Score = 28.5 bits (62), Expect = 8.3
Identities = 28/117 (23%), Positives = 48/117 (41%), Gaps = 20/117 (17%)
Query: 209 SFILVGIIIVTSIRGLLITLTKFFYAISSSKSSNVIVLLLAQ------------------ 250
SF +V ++I + L L+ + A S K S + +LLA
Sbjct: 238 SFYIVNLLIPCVLISFLAPLSFYLPAASGEKVSLGVTILLAMTVFQLMVAEIMPASENVP 297
Query: 251 IMGMYFVSSVLLIRMSMPLEYRTIITEVLGELQFNFYHRWFDVIFLVSALSSILFLY 307
++G Y+++++ LI S L + G H W V+ L +S +LF+Y
Sbjct: 298 LIGKYYIATMALITASTALTIMVMNIHFCGAEARPVPH-WARVVIL-KYMSRVLFVY 352
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.328 0.140 0.406
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,074,488
Number of Sequences: 37866
Number of extensions: 323918
Number of successful extensions: 1115
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 1107
Number of HSP's gapped (non-prelim): 11
length of query: 320
length of database: 18,247,518
effective HSP length: 102
effective length of query: 218
effective length of database: 14,385,186
effective search space: 3135970548
effective search space used: 3135970548
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.