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Search of human proteins with 14251209
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|14251209 chloride intracellular channel 1 [Homo sapiens]
(241 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|14251209 chloride intracellular channel 1 [Homo sapiens] 487 e-138
gi|7330335 chloride intracellular channel 4 [Homo sapiens] 337 7e-93
gi|27894378 chloride intracellular channel 6 [Homo sapiens] 313 7e-86
gi|82617632 chloride intracellular channel 5 isoform b [Homo sap... 310 9e-85
gi|166197662 chloride intracellular channel 5 isoform a [Homo sa... 307 6e-84
gi|66346733 chloride intracellular channel 2 [Homo sapiens] 291 5e-79
gi|40288290 chloride intracellular channel 3 [Homo sapiens] 229 2e-60
gi|48255931 hepatoma-derived growth factor-related protein 2 iso... 33 0.17
gi|14249158 hepatoma-derived growth factor-related protein 2 iso... 33 0.17
gi|4758484 glutathione-S-transferase omega 1 [Homo sapiens] 33 0.22
gi|31742492 Nedd4 binding protein 2 [Homo sapiens] 30 1.9
gi|40254924 leucine rich repeat containing 59 [Homo sapiens] 29 3.2
gi|122056683 FRAS1 related extracellular matrix 1 [Homo sapiens] 29 4.2
gi|222446618 UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-ac... 28 5.5
gi|103472003 forkhead box O4 [Homo sapiens] 28 7.1
gi|22091452 apolipoprotein M [Homo sapiens] 28 7.1
gi|4504187 glutathione S-transferase theta 2 [Homo sapiens] 28 9.3
gi|160707881 formin 2 [Homo sapiens] 28 9.3
gi|5901992 keratocan [Homo sapiens] 28 9.3
gi|124249394 glutathione S-transferase theta 2B [Homo sapiens] 28 9.3
>gi|14251209 chloride intracellular channel 1 [Homo sapiens]
Length = 241
Score = 487 bits (1254), Expect = e-138
Identities = 241/241 (100%), Positives = 241/241 (100%)
Query: 1 MAEEQPQVELFVKAGSDGAKIGNCPFSQRLFMVLWLKGVTFNVTTVDTKRRTETVQKLCP 60
MAEEQPQVELFVKAGSDGAKIGNCPFSQRLFMVLWLKGVTFNVTTVDTKRRTETVQKLCP
Sbjct: 1 MAEEQPQVELFVKAGSDGAKIGNCPFSQRLFMVLWLKGVTFNVTTVDTKRRTETVQKLCP 60
Query: 61 GGQLPFLLYGTEVHTDTNKIEEFLEAVLCPPRYPKLAALNPESNTAGLDIFAKFSAYIKN 120
GGQLPFLLYGTEVHTDTNKIEEFLEAVLCPPRYPKLAALNPESNTAGLDIFAKFSAYIKN
Sbjct: 61 GGQLPFLLYGTEVHTDTNKIEEFLEAVLCPPRYPKLAALNPESNTAGLDIFAKFSAYIKN 120
Query: 121 SNPALNDNLEKGLLKALKVLDNYLTSPLPEEVDETSAEDEGVSQRKFLDGNELTLADCNL 180
SNPALNDNLEKGLLKALKVLDNYLTSPLPEEVDETSAEDEGVSQRKFLDGNELTLADCNL
Sbjct: 121 SNPALNDNLEKGLLKALKVLDNYLTSPLPEEVDETSAEDEGVSQRKFLDGNELTLADCNL 180
Query: 181 LPKLHIVQVVCKKYRGFTIPEAFRGVHRYLSNAYAREEFASTCPDDEEIELAYEQVAKAL 240
LPKLHIVQVVCKKYRGFTIPEAFRGVHRYLSNAYAREEFASTCPDDEEIELAYEQVAKAL
Sbjct: 181 LPKLHIVQVVCKKYRGFTIPEAFRGVHRYLSNAYAREEFASTCPDDEEIELAYEQVAKAL 240
Query: 241 K 241
K
Sbjct: 241 K 241
>gi|7330335 chloride intracellular channel 4 [Homo sapiens]
Length = 253
Score = 337 bits (863), Expect = 7e-93
Identities = 160/238 (67%), Positives = 191/238 (80%)
Query: 3 EEQPQVELFVKAGSDGAKIGNCPFSQRLFMVLWLKGVTFNVTTVDTKRRTETVQKLCPGG 62
+++P +ELFVKAGSDG IGNCPFSQRLFM+LWLKGV F+VTTVD KR+ +Q L PG
Sbjct: 14 DKEPLIELFVKAGSDGESIGNCPFSQRLFMILWLKGVVFSVTTVDLKRKPADLQNLAPGT 73
Query: 63 QLPFLLYGTEVHTDTNKIEEFLEAVLCPPRYPKLAALNPESNTAGLDIFAKFSAYIKNSN 122
PF+ + +EV TD NKIEEFLE VLCPP+Y KL+ +PESNTAG+DIFAKFSAYIKNS
Sbjct: 74 HPPFITFNSEVKTDVNKIEEFLEEVLCPPKYLKLSPKHPESNTAGMDIFAKFSAYIKNSR 133
Query: 123 PALNDNLEKGLLKALKVLDNYLTSPLPEEVDETSAEDEGVSQRKFLDGNELTLADCNLLP 182
P N+ LE+GLLK L+ LD YL SPLP+E+DE S ED S RKFLDGNE+TLADCNLLP
Sbjct: 134 PEANEALERGLLKTLQKLDEYLNSPLPDEIDENSMEDIKFSTRKFLDGNEMTLADCNLLP 193
Query: 183 KLHIVQVVCKKYRGFTIPEAFRGVHRYLSNAYAREEFASTCPDDEEIELAYEQVAKAL 240
KLHIV+VV KKYR F IP+ G+ RYL+NAY+R+EF +TCP D+E+E+AY VAK L
Sbjct: 194 KLHIVKVVAKKYRNFDIPKEMTGIWRYLTNAYSRDEFTNTCPSDKEVEIAYSDVAKRL 251
>gi|27894378 chloride intracellular channel 6 [Homo sapiens]
Length = 686
Score = 313 bits (803), Expect = 7e-86
Identities = 153/238 (64%), Positives = 180/238 (75%)
Query: 4 EQPQVELFVKAGSDGAKIGNCPFSQRLFMVLWLKGVTFNVTTVDTKRRTETVQKLCPGGQ 63
++ + LFVKAG DG IGNCPFSQRLFM+LWLKGV FNVTTVD KR+ +Q L PG
Sbjct: 449 QEHDITLFVKAGYDGESIGNCPFSQRLFMILWLKGVIFNVTTVDLKRKPADLQNLAPGTN 508
Query: 64 LPFLLYGTEVHTDTNKIEEFLEAVLCPPRYPKLAALNPESNTAGLDIFAKFSAYIKNSNP 123
PF+ + EV TD NKIEEFLE L PPRYPKL +PESN+AG D+FAKFSA+IKN+
Sbjct: 509 PPFMTFDGEVKTDVNKIEEFLEEKLAPPRYPKLGTQHPESNSAGNDVFAKFSAFIKNTKK 568
Query: 124 ALNDNLEKGLLKALKVLDNYLTSPLPEEVDETSAEDEGVSQRKFLDGNELTLADCNLLPK 183
N+ EK LLKAL+ LDNYL SPLP+E+D S ED VS RKFLDG+ELTLADCNLLPK
Sbjct: 569 DANEIHEKNLLKALRKLDNYLNSPLPDEIDAYSTEDVTVSGRKFLDGDELTLADCNLLPK 628
Query: 184 LHIVQVVCKKYRGFTIPEAFRGVHRYLSNAYAREEFASTCPDDEEIELAYEQVAKALK 241
LHI+++V KKYR F P G+ RYL+NAYAR+EF +TCP D+EIE AY VAK +K
Sbjct: 629 LHIIKIVAKKYRDFEFPSEMTGIWRYLNNAYARDEFTNTCPADQEIEHAYSDVAKRMK 686
>gi|82617632 chloride intracellular channel 5 isoform b [Homo
sapiens]
Length = 251
Score = 310 bits (793), Expect = 9e-85
Identities = 155/239 (64%), Positives = 182/239 (76%), Gaps = 2/239 (0%)
Query: 3 EEQPQVELFVKAGSDGAKIGNCPFSQRLFMVLWLKGVTFNVTTVDTKRRTETVQKLCPGG 62
+ P++ELFVKAG DG IGNCPFSQRLFM+LWLKGV FNVTTVD KR+ + L PG
Sbjct: 11 DRDPEIELFVKAGIDGESIGNCPFSQRLFMILWLKGVVFNVTTVDLKRKPADLHNLAPGT 70
Query: 63 QLPFLLYGTEVHTDTNKIEEFLEAVLCPPRYPKLAALNPESNTAGLDIFAKFSAYIKNSN 122
PFL + +V TD NKIEEFLE L P +YPKLAA + ESNTAG+DIF+KFSAYIKN+
Sbjct: 71 HPPFLTFNGDVKTDVNKIEEFLEETLTPEKYPKLAAKHRESNTAGIDIFSKFSAYIKNTK 130
Query: 123 PALNDNLEKGLLKALKVLDNYLTSPLPEEVD-ETSAEDEGVSQRKFLDGNELTLADCNLL 181
N LE+GL KALK LD+YL +PLPEE+D T ED+G S+RKFLDG+ELTLADCNLL
Sbjct: 131 QQNNAALERGLTKALKKLDDYLNTPLPEEIDANTCGEDKG-SRRKFLDGDELTLADCNLL 189
Query: 182 PKLHIVQVVCKKYRGFTIPEAFRGVHRYLSNAYAREEFASTCPDDEEIELAYEQVAKAL 240
PKLH+V++V KKYR + IP G+ RYL NAYAR+EF +TC D EIELAY VAK L
Sbjct: 190 PKLHVVKIVAKKYRNYDIPAEMTGLWRYLKNAYARDEFTNTCAADSEIELAYADVAKRL 248
>gi|166197662 chloride intracellular channel 5 isoform a [Homo
sapiens]
Length = 410
Score = 307 bits (786), Expect = 6e-84
Identities = 155/240 (64%), Positives = 181/240 (75%), Gaps = 2/240 (0%)
Query: 2 AEEQPQVELFVKAGSDGAKIGNCPFSQRLFMVLWLKGVTFNVTTVDTKRRTETVQKLCPG 61
A P++ LFVKAG DG IGNCPFSQRLFM+LWLKGV FNVTTVD KR+ + L PG
Sbjct: 169 AHMNPEIYLFVKAGIDGESIGNCPFSQRLFMILWLKGVVFNVTTVDLKRKPADLHNLAPG 228
Query: 62 GQLPFLLYGTEVHTDTNKIEEFLEAVLCPPRYPKLAALNPESNTAGLDIFAKFSAYIKNS 121
PFL + +V TD NKIEEFLE L P +YPKLAA + ESNTAG+DIF+KFSAYIKN+
Sbjct: 229 THPPFLTFNGDVKTDVNKIEEFLEETLTPEKYPKLAAKHRESNTAGIDIFSKFSAYIKNT 288
Query: 122 NPALNDNLEKGLLKALKVLDNYLTSPLPEEVD-ETSAEDEGVSQRKFLDGNELTLADCNL 180
N LE+GL KALK LD+YL +PLPEE+D T ED+G S+RKFLDG+ELTLADCNL
Sbjct: 289 KQQNNAALERGLTKALKKLDDYLNTPLPEEIDANTCGEDKG-SRRKFLDGDELTLADCNL 347
Query: 181 LPKLHIVQVVCKKYRGFTIPEAFRGVHRYLSNAYAREEFASTCPDDEEIELAYEQVAKAL 240
LPKLH+V++V KKYR + IP G+ RYL NAYAR+EF +TC D EIELAY VAK L
Sbjct: 348 LPKLHVVKIVAKKYRNYDIPAEMTGLWRYLKNAYARDEFTNTCAADSEIELAYADVAKRL 407
>gi|66346733 chloride intracellular channel 2 [Homo sapiens]
Length = 247
Score = 291 bits (744), Expect = 5e-79
Identities = 145/233 (62%), Positives = 171/233 (73%)
Query: 6 PQVELFVKAGSDGAKIGNCPFSQRLFMVLWLKGVTFNVTTVDTKRRTETVQKLCPGGQLP 65
P++ELFVKAGSDG IGNCPF QRLFM+LWLKGV FNVTTVD R+ E ++ L PG P
Sbjct: 12 PEIELFVKAGSDGESIGNCPFCQRLFMILWLKGVKFNVTTVDMTRKPEELKDLAPGTNPP 71
Query: 66 FLLYGTEVHTDTNKIEEFLEAVLCPPRYPKLAALNPESNTAGLDIFAKFSAYIKNSNPAL 125
FL+Y E+ TD KIEEFLE L PPRYP L+ ES G ++FAKFSAYIKN+
Sbjct: 72 FLVYNKELKTDFIKIEEFLEQTLAPPRYPHLSPKYKESFDVGCNLFAKFSAYIKNTQKEA 131
Query: 126 NDNLEKGLLKALKVLDNYLTSPLPEEVDETSAEDEGVSQRKFLDGNELTLADCNLLPKLH 185
N N EK LLK K LD+YL +PL +E+D SAE+ VS+R FLDG++LTLADC+LLPKL+
Sbjct: 132 NKNFEKSLLKEFKRLDDYLNTPLLDEIDPDSAEEPPVSRRLFLDGDQLTLADCSLLPKLN 191
Query: 186 IVQVVCKKYRGFTIPEAFRGVHRYLSNAYAREEFASTCPDDEEIELAYEQVAK 238
I++V KKYR F IP F GV RYL NAYAREEF TCP+D+EIE Y VAK
Sbjct: 192 IIKVAAKKYRDFDIPAEFSGVWRYLHNAYAREEFTHTCPEDKEIENTYANVAK 244
>gi|40288290 chloride intracellular channel 3 [Homo sapiens]
Length = 236
Score = 229 bits (584), Expect = 2e-60
Identities = 121/229 (52%), Positives = 153/229 (66%), Gaps = 2/229 (0%)
Query: 5 QPQVELFVKAGSDGAKIGNCPFSQRLFMVLWLKGVTFNVTTVDTKRRTETVQKLCPGGQL 64
+ +++LFVKA DG +G+CP QRLFMVL LKGV F +TTVDT+R + ++ PG QL
Sbjct: 3 ETKLQLFVKASEDGESVGHCPSCQRLFMVLLLKGVPFTLTTVDTRRSPDVLKDFAPGSQL 62
Query: 65 PFLLYGTEVHTDTNKIEEFLEAVLCPPRYPKLAALNPESNTAGLDIFAKFSAYIKNSNPA 124
P LLY ++ TDT +IE+FLE L PP +P LA ESNTAG D+F KFSA+IKN PA
Sbjct: 63 PILLYDSDAKTDTLQIEDFLEETLGPPDFPSLAPRYRESNTAGNDVFHKFSAFIKNPVPA 122
Query: 125 LNDNLEKGLLKALKVLDNYLTSPLPEEVDETSAEDEGVSQRKFLDGNELTLADCNLLPKL 184
++ L + LL+AL LD+YL +PL E+ E S+R+FLDG+ LTLADC+LLPKL
Sbjct: 123 QDEALYQQLLRALARLDSYLRAPLEHELAGEPQLRE--SRRRFLDGDRLTLADCSLLPKL 180
Query: 185 HIVQVVCKKYRGFTIPEAFRGVHRYLSNAYAREEFASTCPDDEEIELAY 233
HIV VC +R IP RGV RYL +A +EF TCP EI AY
Sbjct: 181 HIVDTVCAHFRQAPIPAELRGVRRYLDSAMQEKEFKYTCPHSAEILAAY 229
>gi|48255931 hepatoma-derived growth factor-related protein 2
isoform 1 [Homo sapiens]
Length = 671
Score = 33.5 bits (75), Expect = 0.17
Identities = 19/50 (38%), Positives = 25/50 (50%)
Query: 118 IKNSNPALNDNLEKGLLKALKVLDNYLTSPLPEEVDETSAEDEGVSQRKF 167
+K PAL ++ K KA LD SP EE E+S+E E S + F
Sbjct: 155 LKRKTPALKMSVSKRARKASSDLDQASVSPSEEENSESSSESEKTSDQDF 204
>gi|14249158 hepatoma-derived growth factor-related protein 2
isoform 2 [Homo sapiens]
Length = 670
Score = 33.5 bits (75), Expect = 0.17
Identities = 19/50 (38%), Positives = 25/50 (50%)
Query: 118 IKNSNPALNDNLEKGLLKALKVLDNYLTSPLPEEVDETSAEDEGVSQRKF 167
+K PAL ++ K KA LD SP EE E+S+E E S + F
Sbjct: 155 LKRKTPALKMSVSKRARKASSDLDQASVSPSEEENSESSSESEKTSDQDF 204
>gi|4758484 glutathione-S-transferase omega 1 [Homo sapiens]
Length = 241
Score = 33.1 bits (74), Expect = 0.22
Identities = 16/44 (36%), Positives = 24/44 (54%)
Query: 24 CPFSQRLFMVLWLKGVTFNVTTVDTKRRTETVQKLCPGGQLPFL 67
CPF++R +VL KG+ V ++ K + E K P G +P L
Sbjct: 32 CPFAERTRLVLKAKGIRHEVININLKNKPEWFFKKNPFGLVPVL 75
>gi|31742492 Nedd4 binding protein 2 [Homo sapiens]
Length = 1770
Score = 30.0 bits (66), Expect = 1.9
Identities = 15/61 (24%), Positives = 33/61 (54%)
Query: 95 KLAALNPESNTAGLDIFAKFSAYIKNSNPALNDNLEKGLLKALKVLDNYLTSPLPEEVDE 154
++ A+ PE++ + IF + +KN+N L ++ E+ L + + L + P+++ E
Sbjct: 1205 EMRAVTPENHESMTSIFPSAAVGLKNNNDILPNSQEELLYSSKQSFPGILKATTPKDMSE 1264
Query: 155 T 155
T
Sbjct: 1265 T 1265
>gi|40254924 leucine rich repeat containing 59 [Homo sapiens]
Length = 307
Score = 29.3 bits (64), Expect = 3.2
Identities = 23/62 (37%), Positives = 31/62 (50%), Gaps = 12/62 (19%)
Query: 155 TSAEDEGVSQRKFLDGNE--LTLADCN--------LLPKLHIVQVVCKKYRGFTIPEAFR 204
T A +G + R LDGNE L+L+D N LPK I+ + C K T+P F
Sbjct: 2 TKAGSKGGNLRDKLDGNELDLSLSDLNEVPVKELAALPKATILDLSCNKLT--TLPSDFC 59
Query: 205 GV 206
G+
Sbjct: 60 GL 61
>gi|122056683 FRAS1 related extracellular matrix 1 [Homo sapiens]
Length = 2179
Score = 28.9 bits (63), Expect = 4.2
Identities = 19/72 (26%), Positives = 35/72 (48%), Gaps = 5/72 (6%)
Query: 62 GQLPFLLYGTEVHTD-TNKIEEFLEAVLCPPRYPKLAALN----PESNTAGLDIFAKFSA 116
G FL T + D T+K EE L + PPRY ++ ++ P +N + +D+ +
Sbjct: 1407 GDRGFLTTTTLLAVDGTDKPEELLYVITSPPRYGQIEYVHYPGVPITNFSQMDVVGQTVC 1466
Query: 117 YIKNSNPALNDN 128
Y+ S ++ +
Sbjct: 1467 YVHKSKVTVSSD 1478
>gi|222446618 UDP-N-acetyl-alpha-D-galactosamine:polypeptide
N-acetylgalactosaminyltransferase-like 4 [Homo sapiens]
Length = 607
Score = 28.5 bits (62), Expect = 5.5
Identities = 19/85 (22%), Positives = 38/85 (44%), Gaps = 2/85 (2%)
Query: 115 SAYIKNSNPALNDNLEKGLLKALKVLD--NYLTSPLPEEVDETSAEDEGVSQRKFLDGNE 172
S Y++ PA + LE+ LK+++ ++L + + + + E A+ E F D +
Sbjct: 38 SVYVRGQEPAPDKKLEEDKGDTLKIIERLDHLENVIKQHIQEAPAKPEEAEAEPFTDSSL 97
Query: 173 LTLADCNLLPKLHIVQVVCKKYRGF 197
L P+ V + +Y G+
Sbjct: 98 FAHWGQELSPEGRRVALKQFQYYGY 122
>gi|103472003 forkhead box O4 [Homo sapiens]
Length = 505
Score = 28.1 bits (61), Expect = 7.1
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Query: 95 KLAALNPESNTAGLDIFAKFSAYIKNSNPALNDNLEKGLLKALKVLDNY 143
+L+ L PES +I A S+Y P LN+ LE LL L + ++
Sbjct: 270 RLSPLRPESEVLAEEIPASVSSYAGGVPPTLNEGLE--LLDGLNLTSSH 316
>gi|22091452 apolipoprotein M [Homo sapiens]
Length = 188
Score = 28.1 bits (61), Expect = 7.1
Identities = 20/68 (29%), Positives = 26/68 (38%), Gaps = 13/68 (19%)
Query: 35 WLKGVTFNVTTVDTKRR----TETVQKLCPGGQL---------PFLLYGTEVHTDTNKIE 81
W+ +T T + T+ R TE CPGG + FLLY H +E
Sbjct: 100 WIYHLTEGSTDLRTEGRPDMKTELFSSSCPGGIMLNETGQGYQRFLLYNRSPHPPEKCVE 159
Query: 82 EFLEAVLC 89
EF C
Sbjct: 160 EFKSLTSC 167
>gi|4504187 glutathione S-transferase theta 2 [Homo sapiens]
Length = 244
Score = 27.7 bits (60), Expect = 9.3
Identities = 55/230 (23%), Positives = 92/230 (40%), Gaps = 39/230 (16%)
Query: 27 SQRLFMVLWLKGVTFNVTTVDT---KRRTETVQKLCPGGQLPFLLYGTEVHTDTNKIEEF 83
S+ +++ G+ + TVD + +++ ++ G+LP L G + T+++ I +
Sbjct: 14 SRAVYIFAKKNGIPLELRTVDLVKGQHKSKEFLQINSLGKLPTLKDGDFILTESSAILIY 73
Query: 84 LEAVLCPPR--YPKLAALNPESNTAGLDIFAKFSAYIKNSNPALNDNLEKGLLKALKVLD 141
L P YP + L A+ Y+ + G+ ++VL
Sbjct: 74 LSCKYQTPDHWYP-----------SDLQARARVHEYLGWHADCIRGTF--GIPLWVQVLG 120
Query: 142 NYLTSPLPEEVDETSA----------EDEGVSQRKFLDGNELTLADCNLLPKLHIVQVVC 191
+ +PEE E + ED+ + R FL G ++TLAD L +L +Q V
Sbjct: 121 PLIGVQVPEEKVERNRTAMDQALQWLEDKFLGDRPFLAGQQVTLADLMALEEL--MQPVA 178
Query: 192 KKYRGFTIPEAFRGVHRYLSNAYAREEF--ASTCPDDEEIELA-YEQVAK 238
Y E F G R + E F A C + I L+ EQ AK
Sbjct: 179 LGY------ELFEGRPRLAAWRGRVEAFLGAELCQEAHSIILSILEQAAK 222
>gi|160707881 formin 2 [Homo sapiens]
Length = 1722
Score = 27.7 bits (60), Expect = 9.3
Identities = 13/34 (38%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
Query: 26 FSQRLFMVLWLKGVTFNVTTVDTKRRTETVQKLC 59
FS+R+F +L+ TF+ + +R+ E +QKLC
Sbjct: 1447 FSERVFCILFQS--TFSESICSIRRKLELLQKLC 1478
>gi|5901992 keratocan [Homo sapiens]
Length = 352
Score = 27.7 bits (60), Expect = 9.3
Identities = 25/70 (35%), Positives = 30/70 (42%), Gaps = 12/70 (17%)
Query: 120 NSNPALNDNLEKGLLKALKVL------DNYL---TSPLPEEVDETSAEDEGVS---QRKF 167
N N N +EKG L LK L DN L SPLP +++ VS Q F
Sbjct: 103 NKNKITNYGIEKGALSQLKKLLFLFLEDNELEEVPSPLPRSLEQLQLARNKVSRIPQGTF 162
Query: 168 LDGNELTLAD 177
+ LTL D
Sbjct: 163 SNLENLTLLD 172
>gi|124249394 glutathione S-transferase theta 2B [Homo sapiens]
Length = 244
Score = 27.7 bits (60), Expect = 9.3
Identities = 55/230 (23%), Positives = 92/230 (40%), Gaps = 39/230 (16%)
Query: 27 SQRLFMVLWLKGVTFNVTTVDT---KRRTETVQKLCPGGQLPFLLYGTEVHTDTNKIEEF 83
S+ +++ G+ + TVD + +++ ++ G+LP L G + T+++ I +
Sbjct: 14 SRAVYIFAKKNGIPLELRTVDLVKGQHKSKEFLQINSLGKLPTLKDGDFILTESSAILIY 73
Query: 84 LEAVLCPPR--YPKLAALNPESNTAGLDIFAKFSAYIKNSNPALNDNLEKGLLKALKVLD 141
L P YP + L A+ Y+ + G+ ++VL
Sbjct: 74 LSCKYQTPDHWYP-----------SDLQARARVHEYLGWHADCIRGTF--GIPLWVQVLG 120
Query: 142 NYLTSPLPEEVDETSA----------EDEGVSQRKFLDGNELTLADCNLLPKLHIVQVVC 191
+ +PEE E + ED+ + R FL G ++TLAD L +L +Q V
Sbjct: 121 PLIGVQVPEEKVERNRTAMDQALQWLEDKFLGDRPFLAGQQVTLADLMALEEL--MQPVA 178
Query: 192 KKYRGFTIPEAFRGVHRYLSNAYAREEF--ASTCPDDEEIELA-YEQVAK 238
Y E F G R + E F A C + I L+ EQ AK
Sbjct: 179 LGY------ELFEGRPRLAAWRGRVEAFLGAELCQEAHSIILSILEQAAK 222
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.135 0.394
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,315,316
Number of Sequences: 37866
Number of extensions: 405092
Number of successful extensions: 840
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 826
Number of HSP's gapped (non-prelim): 21
length of query: 241
length of database: 18,247,518
effective HSP length: 99
effective length of query: 142
effective length of database: 14,498,784
effective search space: 2058827328
effective search space used: 2058827328
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.