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Search of human proteins with 9955929
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|9955929 acrosomal vesicle protein 1 isoform c precursor
[Homo sapiens]
(210 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|9955929 acrosomal vesicle protein 1 isoform c precursor [Homo... 436 e-123
gi|4501879 acrosomal vesicle protein 1 isoform a precursor [Homo... 399 e-112
gi|9955931 acrosomal vesicle protein 1 isoform d precursor [Homo... 395 e-110
gi|9955933 acrosomal vesicle protein 1 isoform e precursor [Homo... 347 4e-96
gi|9955927 acrosomal vesicle protein 1 isoform b precursor [Homo... 340 5e-94
gi|9955937 acrosomal vesicle protein 1 isoform f precursor [Homo... 315 1e-86
gi|9955941 acrosomal vesicle protein 1 isoform h precursor [Homo... 288 2e-78
gi|9955935 acrosomal vesicle protein 1 isoform j precursor [Homo... 181 4e-46
gi|9955945 acrosomal vesicle protein 1 isoform k precursor [Homo... 94 8e-20
gi|38261962 activating transcription factor 7 interacting protei... 57 1e-08
gi|222136622 prostate and testis expressed 3 [Homo sapiens] 55 6e-08
gi|221554530 prostate and testis expressed 4 [Homo sapiens] 50 1e-06
gi|27894378 chloride intracellular channel 6 [Homo sapiens] 42 5e-04
gi|78190492 retinitis pigmentosa GTPase regulator isoform C [Hom... 41 6e-04
gi|150170670 piccolo isoform 2 [Homo sapiens] 41 6e-04
gi|150378539 piccolo isoform 1 [Homo sapiens] 41 6e-04
gi|239746922 PREDICTED: similar to cancer/testis antigen family ... 41 8e-04
gi|126090892 aggrecan isoform 2 precursor [Homo sapiens] 40 0.001
gi|126090883 aggrecan isoform 1 precursor [Homo sapiens] 40 0.001
gi|19923082 expressed in prostate and testis [Homo sapiens] 40 0.001
gi|139394599 hypermethylated in cancer 2 [Homo sapiens] 40 0.001
gi|149999615 variable charge, X-linked 3B [Homo sapiens] 40 0.002
gi|66932943 variable charge, X chromosome [Homo sapiens] 39 0.002
gi|44890059 involucrin [Homo sapiens] 38 0.005
gi|4758216 dishevelled 2 [Homo sapiens] 38 0.007
gi|49087132 sal-like 2 [Homo sapiens] 38 0.007
gi|7657465 podocalyxin-like 2 [Homo sapiens] 38 0.007
gi|157743257 POU domain, class 6, transcription factor 2 [Homo s... 38 0.007
gi|5031995 prostate stem cell antigen preproprotein [Homo sapiens] 37 0.009
gi|126723060 zinc finger CCCH-type containing 4 [Homo sapiens] 37 0.009
>gi|9955929 acrosomal vesicle protein 1 isoform c precursor [Homo
sapiens]
Length = 210
Score = 436 bits (1121), Expect = e-123
Identities = 210/210 (100%), Positives = 210/210 (100%)
Query: 1 MNRFLLLMSLYLLGSARGTSSQPNELSGSIDHQTSVQQLPGEPAATEHAEGEHTVGEQPS 60
MNRFLLLMSLYLLGSARGTSSQPNELSGSIDHQTSVQQLPGEPAATEHAEGEHTVGEQPS
Sbjct: 1 MNRFLLLMSLYLLGSARGTSSQPNELSGSIDHQTSVQQLPGEPAATEHAEGEHTVGEQPS 60
Query: 61 GEQPSGEHLSGEQPLSELESGEQPSDEQPSGEHGSGEQPSGEQASGEQPSGEHASGEQAS 120
GEQPSGEHLSGEQPLSELESGEQPSDEQPSGEHGSGEQPSGEQASGEQPSGEHASGEQAS
Sbjct: 61 GEQPSGEHLSGEQPLSELESGEQPSDEQPSGEHGSGEQPSGEQASGEQPSGEHASGEQAS 120
Query: 121 GAPISSTSTGTILNCYTCAYMNDQGKCLRGEGTCITQNSQQCMLKKIFEGGKLQFMVQGC 180
GAPISSTSTGTILNCYTCAYMNDQGKCLRGEGTCITQNSQQCMLKKIFEGGKLQFMVQGC
Sbjct: 121 GAPISSTSTGTILNCYTCAYMNDQGKCLRGEGTCITQNSQQCMLKKIFEGGKLQFMVQGC 180
Query: 181 ENMCPSMNLFSHGTRMQIICCRNQSFCNKI 210
ENMCPSMNLFSHGTRMQIICCRNQSFCNKI
Sbjct: 181 ENMCPSMNLFSHGTRMQIICCRNQSFCNKI 210
>gi|4501879 acrosomal vesicle protein 1 isoform a precursor [Homo
sapiens]
Length = 265
Score = 399 bits (1026), Expect = e-112
Identities = 207/265 (78%), Positives = 208/265 (78%), Gaps = 55/265 (20%)
Query: 1 MNRFLLLMSLYLLGSARGTSSQPNELSGSIDHQTSVQQLP-------------------- 40
MNRFLLLMSLYLLGSARGTSSQPNELSGSIDHQTSVQQLP
Sbjct: 1 MNRFLLLMSLYLLGSARGTSSQPNELSGSIDHQTSVQQLPGEFFSLENPSDAEALYETSS 60
Query: 41 -------------------------GEPAATEH----------AEGEHTVGEQPSGEQPS 65
GE A +EH AEGEHTVGEQPSGEQPS
Sbjct: 61 GLNTLSEHGSSEHGSSKHTVAEHTSGEHAESEHASGEPAATEHAEGEHTVGEQPSGEQPS 120
Query: 66 GEHLSGEQPLSELESGEQPSDEQPSGEHGSGEQPSGEQASGEQPSGEHASGEQASGAPIS 125
GEHLSGEQPLSELESGEQPSDEQPSGEHGSGEQPSGEQASGEQPSGEHASGEQASGAPIS
Sbjct: 121 GEHLSGEQPLSELESGEQPSDEQPSGEHGSGEQPSGEQASGEQPSGEHASGEQASGAPIS 180
Query: 126 STSTGTILNCYTCAYMNDQGKCLRGEGTCITQNSQQCMLKKIFEGGKLQFMVQGCENMCP 185
STSTGTILNCYTCAYMNDQGKCLRGEGTCITQNSQQCMLKKIFEGGKLQFMVQGCENMCP
Sbjct: 181 STSTGTILNCYTCAYMNDQGKCLRGEGTCITQNSQQCMLKKIFEGGKLQFMVQGCENMCP 240
Query: 186 SMNLFSHGTRMQIICCRNQSFCNKI 210
SMNLFSHGTRMQIICCRNQSFCNKI
Sbjct: 241 SMNLFSHGTRMQIICCRNQSFCNKI 265
>gi|9955931 acrosomal vesicle protein 1 isoform d precursor [Homo
sapiens]
Length = 195
Score = 395 bits (1014), Expect = e-110
Identities = 195/210 (92%), Positives = 195/210 (92%), Gaps = 15/210 (7%)
Query: 1 MNRFLLLMSLYLLGSARGTSSQPNELSGSIDHQTSVQQLPGEPAATEHAEGEHTVGEQPS 60
MNRFLLLMSLYLLGSARGTSSQPNELSGSIDHQTSVQQLPGE QPS
Sbjct: 1 MNRFLLLMSLYLLGSARGTSSQPNELSGSIDHQTSVQQLPGE---------------QPS 45
Query: 61 GEQPSGEHLSGEQPLSELESGEQPSDEQPSGEHGSGEQPSGEQASGEQPSGEHASGEQAS 120
GEQPSGEHLSGEQPLSELESGEQPSDEQPSGEHGSGEQPSGEQASGEQPSGEHASGEQAS
Sbjct: 46 GEQPSGEHLSGEQPLSELESGEQPSDEQPSGEHGSGEQPSGEQASGEQPSGEHASGEQAS 105
Query: 121 GAPISSTSTGTILNCYTCAYMNDQGKCLRGEGTCITQNSQQCMLKKIFEGGKLQFMVQGC 180
GAPISSTSTGTILNCYTCAYMNDQGKCLRGEGTCITQNSQQCMLKKIFEGGKLQFMVQGC
Sbjct: 106 GAPISSTSTGTILNCYTCAYMNDQGKCLRGEGTCITQNSQQCMLKKIFEGGKLQFMVQGC 165
Query: 181 ENMCPSMNLFSHGTRMQIICCRNQSFCNKI 210
ENMCPSMNLFSHGTRMQIICCRNQSFCNKI
Sbjct: 166 ENMCPSMNLFSHGTRMQIICCRNQSFCNKI 195
>gi|9955933 acrosomal vesicle protein 1 isoform e precursor [Homo
sapiens]
Length = 176
Score = 347 bits (890), Expect = 4e-96
Identities = 176/210 (83%), Positives = 176/210 (83%), Gaps = 34/210 (16%)
Query: 1 MNRFLLLMSLYLLGSARGTSSQPNELSGSIDHQTSVQQLPGEPAATEHAEGEHTVGEQPS 60
MNRFLLLMSLYLLGSARGTSSQPNELSGSIDHQTSVQQLPGE QPS
Sbjct: 1 MNRFLLLMSLYLLGSARGTSSQPNELSGSIDHQTSVQQLPGE---------------QPS 45
Query: 61 GEQPSGEHLSGEQPLSELESGEQPSDEQPSGEHGSGEQPSGEQASGEQPSGEHASGEQAS 120
GEQPSGEHLSGEQPLSELESGEQPSDEQPSGEHGSGEQPSGEQASGEQPSG
Sbjct: 46 GEQPSGEHLSGEQPLSELESGEQPSDEQPSGEHGSGEQPSGEQASGEQPSG--------- 96
Query: 121 GAPISSTSTGTILNCYTCAYMNDQGKCLRGEGTCITQNSQQCMLKKIFEGGKLQFMVQGC 180
TILNCYTCAYMNDQGKCLRGEGTCITQNSQQCMLKKIFEGGKLQFMVQGC
Sbjct: 97 ----------TILNCYTCAYMNDQGKCLRGEGTCITQNSQQCMLKKIFEGGKLQFMVQGC 146
Query: 181 ENMCPSMNLFSHGTRMQIICCRNQSFCNKI 210
ENMCPSMNLFSHGTRMQIICCRNQSFCNKI
Sbjct: 147 ENMCPSMNLFSHGTRMQIICCRNQSFCNKI 176
>gi|9955927 acrosomal vesicle protein 1 isoform b precursor [Homo
sapiens]
Length = 246
Score = 340 bits (872), Expect = 5e-94
Identities = 182/265 (68%), Positives = 185/265 (69%), Gaps = 74/265 (27%)
Query: 1 MNRFLLLMSLYLLGSARGTSSQPNELSG-------------------------------- 28
MNRFLLLMSLYLLGSARGTSSQPNELSG
Sbjct: 1 MNRFLLLMSLYLLGSARGTSSQPNELSGSIDHQTSVQQLPGEFFSLENPSDAEALYETSS 60
Query: 29 ---------SIDHQTSV--------------QQLPGEPAATEHAEGEHTVGEQPSGEQPS 65
S +H +S + GEPAATEHAEGEHTVGEQPSGEQPS
Sbjct: 61 GLNTLSEHGSSEHGSSKHTVAEHTSGEHAESEHASGEPAATEHAEGEHTVGEQPSGEQPS 120
Query: 66 GEHLSGEQPLSELESGEQPSDEQPSGEHGSGEQPSGEQASGEQPSGEHASGEQASGAPIS 125
GEHLSGEQPLSELESGEQPSDEQPSGEHGSGEQPSGEQASGEQPSG
Sbjct: 121 GEHLSGEQPLSELESGEQPSDEQPSGEHGSGEQPSGEQASGEQPSG-------------- 166
Query: 126 STSTGTILNCYTCAYMNDQGKCLRGEGTCITQNSQQCMLKKIFEGGKLQFMVQGCENMCP 185
TILNCYTCAYMNDQGKCLRGEGTCITQNSQQCMLKKIFEGGKLQFMVQGCENMCP
Sbjct: 167 -----TILNCYTCAYMNDQGKCLRGEGTCITQNSQQCMLKKIFEGGKLQFMVQGCENMCP 221
Query: 186 SMNLFSHGTRMQIICCRNQSFCNKI 210
SMNLFSHGTRMQIICCRNQSFCNKI
Sbjct: 222 SMNLFSHGTRMQIICCRNQSFCNKI 246
>gi|9955937 acrosomal vesicle protein 1 isoform f precursor [Homo
sapiens]
Length = 170
Score = 315 bits (808), Expect = 1e-86
Identities = 166/210 (79%), Positives = 166/210 (79%), Gaps = 40/210 (19%)
Query: 1 MNRFLLLMSLYLLGSARGTSSQPNELSGSIDHQTSVQQLPGEPAATEHAEGEHTVGEQPS 60
MNRFLLLMSLYLLGSARGTSSQPNELSGSIDHQTSVQQLPGE QPS
Sbjct: 1 MNRFLLLMSLYLLGSARGTSSQPNELSGSIDHQTSVQQLPGE---------------QPS 45
Query: 61 GEQPSGEHLSGEQPLSELESGEQPSDEQPSGEHGSGEQPSGEQASGEQPSGEHASGEQAS 120
EQPSGEH SGEQP SGEQ S EQPSGEH ASGEQAS
Sbjct: 46 DEQPSGEHGSGEQP-----SGEQASGEQPSGEH--------------------ASGEQAS 80
Query: 121 GAPISSTSTGTILNCYTCAYMNDQGKCLRGEGTCITQNSQQCMLKKIFEGGKLQFMVQGC 180
GAPISSTSTGTILNCYTCAYMNDQGKCLRGEGTCITQNSQQCMLKKIFEGGKLQFMVQGC
Sbjct: 81 GAPISSTSTGTILNCYTCAYMNDQGKCLRGEGTCITQNSQQCMLKKIFEGGKLQFMVQGC 140
Query: 181 ENMCPSMNLFSHGTRMQIICCRNQSFCNKI 210
ENMCPSMNLFSHGTRMQIICCRNQSFCNKI
Sbjct: 141 ENMCPSMNLFSHGTRMQIICCRNQSFCNKI 170
>gi|9955941 acrosomal vesicle protein 1 isoform h precursor [Homo
sapiens]
Length = 155
Score = 288 bits (738), Expect = 2e-78
Identities = 155/210 (73%), Positives = 155/210 (73%), Gaps = 55/210 (26%)
Query: 1 MNRFLLLMSLYLLGSARGTSSQPNELSGSIDHQTSVQQLPGEPAATEHAEGEHTVGEQPS 60
MNRFLLLMSLYLLGSARGTSSQPNELSGSIDHQTSVQQLPGE QPS
Sbjct: 1 MNRFLLLMSLYLLGSARGTSSQPNELSGSIDHQTSVQQLPGE---------------QPS 45
Query: 61 GEQPSGEHLSGEQPLSELESGEQPSDEQPSGEHGSGEQPSGEQASGEQPSGEHASGEQAS 120
GEQPSGEHLSGEQPLSELESGEQPSDEQPSGEHGSGEQPSGEQASGEQPSGEHASGEQAS
Sbjct: 46 GEQPSGEHLSGEQPLSELESGEQPSDEQPSGEHGSGEQPSGEQASGEQPSGEHASGEQAS 105
Query: 121 GAPISSTSTGTILNCYTCAYMNDQGKCLRGEGTCITQNSQQCMLKKIFEGGKLQFMVQGC 180
GAPISSTST GGKLQFMVQGC
Sbjct: 106 GAPISSTST----------------------------------------GGKLQFMVQGC 125
Query: 181 ENMCPSMNLFSHGTRMQIICCRNQSFCNKI 210
ENMCPSMNLFSHGTRMQIICCRNQSFCNKI
Sbjct: 126 ENMCPSMNLFSHGTRMQIICCRNQSFCNKI 155
>gi|9955935 acrosomal vesicle protein 1 isoform j precursor [Homo
sapiens]
Length = 121
Score = 181 bits (459), Expect = 4e-46
Identities = 86/104 (82%), Positives = 89/104 (85%), Gaps = 4/104 (3%)
Query: 111 GEHASGEQASGAPISSTST----GTILNCYTCAYMNDQGKCLRGEGTCITQNSQQCMLKK 166
G + + SG+ TS GTILNCYTCAYMNDQGKCLRGEGTCITQNSQQCMLKK
Sbjct: 18 GTSSQPNELSGSIDHQTSVQQLPGTILNCYTCAYMNDQGKCLRGEGTCITQNSQQCMLKK 77
Query: 167 IFEGGKLQFMVQGCENMCPSMNLFSHGTRMQIICCRNQSFCNKI 210
IFEGGKLQFMVQGCENMCPSMNLFSHGTRMQIICCRNQSFCNKI
Sbjct: 78 IFEGGKLQFMVQGCENMCPSMNLFSHGTRMQIICCRNQSFCNKI 121
Score = 83.2 bits (204), Expect = 1e-16
Identities = 41/41 (100%), Positives = 41/41 (100%)
Query: 1 MNRFLLLMSLYLLGSARGTSSQPNELSGSIDHQTSVQQLPG 41
MNRFLLLMSLYLLGSARGTSSQPNELSGSIDHQTSVQQLPG
Sbjct: 1 MNRFLLLMSLYLLGSARGTSSQPNELSGSIDHQTSVQQLPG 41
>gi|9955945 acrosomal vesicle protein 1 isoform k precursor [Homo
sapiens]
Length = 81
Score = 94.0 bits (232), Expect = 8e-20
Identities = 41/41 (100%), Positives = 41/41 (100%)
Query: 170 GGKLQFMVQGCENMCPSMNLFSHGTRMQIICCRNQSFCNKI 210
GGKLQFMVQGCENMCPSMNLFSHGTRMQIICCRNQSFCNKI
Sbjct: 41 GGKLQFMVQGCENMCPSMNLFSHGTRMQIICCRNQSFCNKI 81
Score = 83.2 bits (204), Expect = 1e-16
Identities = 41/41 (100%), Positives = 41/41 (100%)
Query: 1 MNRFLLLMSLYLLGSARGTSSQPNELSGSIDHQTSVQQLPG 41
MNRFLLLMSLYLLGSARGTSSQPNELSGSIDHQTSVQQLPG
Sbjct: 1 MNRFLLLMSLYLLGSARGTSSQPNELSGSIDHQTSVQQLPG 41
>gi|38261962 activating transcription factor 7 interacting protein
[Homo sapiens]
Length = 1270
Score = 56.6 bits (135), Expect = 1e-08
Identities = 32/91 (35%), Positives = 49/91 (53%), Gaps = 5/91 (5%)
Query: 36 VQQLPGEPAATEHAEGEHTVGEQPSGEQPSGEHLSGEQPLSELESGEQPSDEQPSGEHGS 95
V +LP EP + + A G+ G+ SG SG+ SG+ S E S + SG+ S
Sbjct: 122 VSKLPAEPVSGDPAPGDLDAGDPASGVLASGDSTSGDP-----TSSEPSSSDAASGDATS 176
Query: 96 GEQPSGEQASGEQPSGEHASGEQASGAPISS 126
G+ PSG+ + G+ SG+ + + +SG P SS
Sbjct: 177 GDAPSGDVSPGDATSGDATADDLSSGDPTSS 207
Score = 56.2 bits (134), Expect = 2e-08
Identities = 33/93 (35%), Positives = 50/93 (53%)
Query: 34 TSVQQLPGEPAATEHAEGEHTVGEQPSGEQPSGEHLSGEQPLSELESGEQPSDEQPSGEH 93
TS EP++++ A G+ T G+ PSG+ G+ SG+ +L SG+ S + GE
Sbjct: 155 TSGDPTSSEPSSSDAASGDATSGDAPSGDVSPGDATSGDATADDLSSGDPTSSDPIPGEP 214
Query: 94 GSGEQPSGEQASGEQPSGEHASGEQASGAPISS 126
E SG+ A+ + S E S + ASGAP S+
Sbjct: 215 VPVEPISGDCAADDIASSEITSVDLASGAPAST 247
Score = 44.3 bits (103), Expect = 8e-05
Identities = 27/85 (31%), Positives = 42/85 (49%), Gaps = 5/85 (5%)
Query: 41 GEPAATEHAEGEHTVGEQPSGEQPSGEHLSGEQPLSELESGEQPSDEQPSGEHGSGEQPS 100
G+PA+ A G+ T G+ S E S + SG + SG+ PS + G+ SG+ +
Sbjct: 142 GDPASGVLASGDSTSGDPTSSEPSSSDAASG-----DATSGDAPSGDVSPGDATSGDATA 196
Query: 101 GEQASGEQPSGEHASGEQASGAPIS 125
+ +SG+ S + GE PIS
Sbjct: 197 DDLSSGDPTSSDPIPGEPVPVEPIS 221
>gi|222136622 prostate and testis expressed 3 [Homo sapiens]
Length = 98
Score = 54.7 bits (130), Expect = 6e-08
Identities = 26/78 (33%), Positives = 35/78 (44%), Gaps = 1/78 (1%)
Query: 131 TILNCYTCAYMNDQGKCLRGEGTCITQNSQQCMLKKIFEGGKLQFMVQGCENMCPSMNLF 190
T L C TC +C RG G C Q + CML +I++ LQ C+ C M F
Sbjct: 19 TSLQCITCHLRTRTDRCRRGFGVCTAQKGEACMLLRIYQRNTLQISYMVCQKFCRDMT-F 77
Query: 191 SHGTRMQIICCRNQSFCN 208
R + C N ++CN
Sbjct: 78 DLRNRTYVHTCCNYNYCN 95
>gi|221554530 prostate and testis expressed 4 [Homo sapiens]
Length = 98
Score = 50.4 bits (119), Expect = 1e-06
Identities = 24/76 (31%), Positives = 35/76 (46%), Gaps = 2/76 (2%)
Query: 133 LNCYTCAYMNDQGKCLRGEGTCITQNSQQCMLKKIFEGGKLQFMVQGCENMCPSMNLFSH 192
L C TC Y + KC+ G GTCI + ++ C F G K + C+ C
Sbjct: 23 LKCNTCIY-TEGWKCMAGRGTCIAKENELCSTTAYFRGDKHMYSTHMCKYKCREEESSKR 81
Query: 193 GTRMQIICCRNQSFCN 208
G +CC +++FCN
Sbjct: 82 GLLRVTLCC-DRNFCN 96
>gi|27894378 chloride intracellular channel 6 [Homo sapiens]
Length = 686
Score = 41.6 bits (96), Expect = 5e-04
Identities = 28/113 (24%), Positives = 45/113 (39%), Gaps = 10/113 (8%)
Query: 14 GSARGTSSQPNELSGSIDHQTSVQQLPGEPAATEHAEGEHTVGEQPSGEQPSGEHLSGEQ 73
GSA G + + G + + E A + E E VG+ E P+G+ + E
Sbjct: 150 GSASGEAGDSVDAEGPLG-----DNIEAEGPAGDSVEAEGRVGDSVDAEGPAGDSVDAEG 204
Query: 74 PLSELESGEQPSDEQPSGEHGSGEQPSGEQASGEQPSGEHASGEQASGAPISS 126
PL G+ E P+G+ E G+ E P+G+ E G + +
Sbjct: 205 PL-----GDNIQAEGPAGDSVDAEGRVGDSVDAEGPAGDSVDAEGRVGDSVEA 252
Score = 36.2 bits (82), Expect = 0.021
Identities = 26/91 (28%), Positives = 43/91 (47%), Gaps = 8/91 (8%)
Query: 39 LPGEPAATEHAEGEHTVGEQPSGEQPSGEHLSGEQPLSE-LESGEQPSDEQ----PSGEH 93
+ E A + + E VG+ E P+G+ + E + + +E+G+ D P+G+
Sbjct: 210 IQAEGPAGDSVDAEGRVGDSVDAEGPAGDSVDAEGRVGDSVEAGDPAGDGVEAGVPAGDS 269
Query: 94 GSGEQPSGEQASGEQPSG--EHASGE-QASG 121
E P+G+ E P+G SGE Q SG
Sbjct: 270 VEAEGPAGDSMDAEGPAGRARRVSGEPQQSG 300
Score = 35.8 bits (81), Expect = 0.027
Identities = 22/106 (20%), Positives = 40/106 (37%)
Query: 16 ARGTSSQPNELSGSIDHQTSVQQLPGEPAATEHAEGEHTVGEQPSGEQPSGEHLSGEQPL 75
A G + E G + + G+ E G++ E P+G+ E G+
Sbjct: 172 AEGPAGDSVEAEGRVGDSVDAEGPAGDSVDAEGPLGDNIQAEGPAGDSVDAEGRVGDSVD 231
Query: 76 SELESGEQPSDEQPSGEHGSGEQPSGEQASGEQPSGEHASGEQASG 121
+E +G+ E G+ P+G+ P+G+ E +G
Sbjct: 232 AEGPAGDSVDAEGRVGDSVEAGDPAGDGVEAGVPAGDSVEAEGPAG 277
Score = 34.7 bits (78), Expect = 0.060
Identities = 26/83 (31%), Positives = 31/83 (37%), Gaps = 5/83 (6%)
Query: 40 PGEPAATEHAEGEHTVGEQPSGEQPSGEHLSGEQPLSELESGEQPSDEQPSGEHGSGEQP 99
PGEP A E E G + + E P G E + G + G HG E
Sbjct: 28 PGEPGAAG-GEAEGPEGSEGAEEAPRGAAAVKEAGGGGPDRGPEAEARGTRGAHGETEAE 86
Query: 100 SGEQASGEQPSGEHASGEQASGA 122
G E P G GE+ SGA
Sbjct: 87 EGAPEGAEVPQG----GEETSGA 105
Score = 33.1 bits (74), Expect = 0.18
Identities = 25/92 (27%), Positives = 37/92 (40%), Gaps = 7/92 (7%)
Query: 37 QQLPGEPAATEHAEGEHTVGEQPSGEQP--SGEHLSGEQPLSELESGEQPSDEQPSGEHG 94
Q+ P + AA E E E P G +G+ + E PL G+ E P+G+
Sbjct: 126 QREPEDSAAPERQEEAEQRPEVPEGSASGEAGDSVDAEGPL-----GDNIEAEGPAGDSV 180
Query: 95 SGEQPSGEQASGEQPSGEHASGEQASGAPISS 126
E G+ E P+G+ E G I +
Sbjct: 181 EAEGRVGDSVDAEGPAGDSVDAEGPLGDNIQA 212
Score = 32.3 bits (72), Expect = 0.30
Identities = 33/129 (25%), Positives = 48/129 (37%), Gaps = 16/129 (12%)
Query: 14 GSARGTSSQPNELS-GSIDHQT---------SVQQLPGEPA--ATEHAEGEHTVGEQPSG 61
G AR S +P + GS+ Q S + PGE A A E AE G + +
Sbjct: 287 GRARRVSGEPQQSGDGSLSPQAEAIEVAAGESAGRSPGELAWDAAEEAEVPGVKGSEEAA 346
Query: 62 ----EQPSGEHLSGEQPLSELESGEQPSDEQPSGEHGSGEQPSGEQASGEQPSGEHASGE 117
+GE G+ P E E+ + P G E++ P GE + G
Sbjct: 347 PGDARADAGEDRVGDGPQQEPGEDEERRERSPEGPREEEAAGGEEESPDSSPHGEASRGA 406
Query: 118 QASGAPISS 126
A +S+
Sbjct: 407 AEPEAQLSN 415
Score = 29.3 bits (64), Expect = 2.5
Identities = 20/70 (28%), Positives = 28/70 (40%), Gaps = 7/70 (10%)
Query: 59 PSGEQPSGEHLSGEQPLSELESGEQPSDEQPSG-----EHGSGEQPSGEQASGEQPSGEH 113
P E+P +G + +E G + ++E P G E G G G +A G H
Sbjct: 23 PLAERPGEPGAAGGE--AEGPEGSEGAEEAPRGAAAVKEAGGGGPDRGPEAEARGTRGAH 80
Query: 114 ASGEQASGAP 123
E GAP
Sbjct: 81 GETEAEEGAP 90
Score = 27.7 bits (60), Expect = 7.4
Identities = 18/66 (27%), Positives = 24/66 (36%), Gaps = 6/66 (9%)
Query: 58 QPSGEQPSGEHLSGEQPLSELESGEQPSDEQPSGEHGSGEQPSGEQASGEQPSGEHASGE 117
+P G P G Q E+ + +P G E P G + + E P G A E
Sbjct: 6 EPEGVAP------GPQGPPEVPAPLAERPGEPGAAGGEAEGPEGSEGAEEAPRGAAAVKE 59
Query: 118 QASGAP 123
G P
Sbjct: 60 AGGGGP 65
>gi|78190492 retinitis pigmentosa GTPase regulator isoform C [Homo
sapiens]
Length = 1152
Score = 41.2 bits (95), Expect = 6e-04
Identities = 30/101 (29%), Positives = 45/101 (44%), Gaps = 13/101 (12%)
Query: 32 HQTSVQQLPGEPAATEHAEGEHTVGEQPSGEQPSGE--------HLSGEQPLSELESGEQ 83
HQ Q E EH EGE G++ E+ GE + GE+ E E GE+
Sbjct: 719 HQKERNQEMEEGGEEEHGEGEEEEGDREEEEEKEGEGKEEGEGEEVEGER---EKEEGER 775
Query: 84 PSDEQPSGEHGSGEQPSGEQASGEQPSGEHASGEQASGAPI 124
+E+ +G+ GE+ G+Q GE+ E E+ G +
Sbjct: 776 KKEER-AGKEEKGEE-EGDQGEGEEEETEGRGEEKEEGGEV 814
Score = 37.4 bits (85), Expect = 0.009
Identities = 27/78 (34%), Positives = 33/78 (42%), Gaps = 7/78 (8%)
Query: 41 GEPAATEHAEGEHTVGEQPSGEQPSGEHLSGEQPLSELESGEQPSDEQPSGEHGSGEQPS 100
GE E EGE GE+ GE E GE E E GE +E+ G GE+
Sbjct: 883 GEGEGEEEGEGE---GEEEEGEGEGEEEGEGE---GEEEEGEGKGEEEGEEGEGEGEEEE 936
Query: 101 GE-QASGEQPSGEHASGE 117
GE + + GE GE
Sbjct: 937 GEGEGEDGEGEGEEEEGE 954
Score = 37.0 bits (84), Expect = 0.012
Identities = 29/76 (38%), Positives = 36/76 (47%), Gaps = 12/76 (15%)
Query: 47 EHAEGEHTVGEQPSGEQPSGEHLSGEQPLSELESGEQPSDEQPSGEHGSGEQPSGE-QAS 105
E EGE GE+ GE GE GE E E GE +E+ GE G GE+ E +
Sbjct: 829 EEEEGE---GEEEEGE---GEEEEGE---GEEEEGEGKGEEE--GEEGEGEEEGEEGEGE 877
Query: 106 GEQPSGEHASGEQASG 121
GE+ GE E+ G
Sbjct: 878 GEEEEGEGEGEEEGEG 893
Score = 36.6 bits (83), Expect = 0.016
Identities = 30/110 (27%), Positives = 43/110 (39%), Gaps = 13/110 (11%)
Query: 22 QPNELSGSIDHQTSVQQLPGEPAATEHAEGEHTVGEQPSGE------QPSGEHLSGEQPL 75
+ E G + + ++ GE E E GE+ GE + GE GE
Sbjct: 898 EEGEGEGEEEGEGEGEEEEGEGKGEEEGEEGEGEGEEEEGEGEGEDGEGEGEEEEGEWEG 957
Query: 76 SELES-GEQPSDEQPSGEHGSGE------QPSGEQASGEQPSGEHASGEQ 118
E E GE + + GE G GE + GE+ GE+ E GE+
Sbjct: 958 EEEEGEGEGEEEGEGEGEEGEGEGEEEEGEGEGEEEEGEEEGEEEGEGEE 1007
Score = 36.2 bits (82), Expect = 0.021
Identities = 26/77 (33%), Positives = 34/77 (44%), Gaps = 6/77 (7%)
Query: 47 EHAEGEHTVGEQPSGEQPSGEHLSGEQPLSELESGEQPSDEQPSGEH--GSGEQPSGEQA 104
E EGE GE GE+ GE GE+ E E E+ + + GE G GE +
Sbjct: 838 EEGEGEEEEGE---GEEEEGEG-KGEEEGEEGEGEEEGEEGEGEGEEEEGEGEGEEEGEG 893
Query: 105 SGEQPSGEHASGEQASG 121
GE+ GE E+ G
Sbjct: 894 EGEEEEGEGEGEEEGEG 910
Score = 36.2 bits (82), Expect = 0.021
Identities = 27/78 (34%), Positives = 33/78 (42%), Gaps = 7/78 (8%)
Query: 50 EGEHTVGEQPSGEQPSGEHLSGEQPLSELES---GEQPSDEQPSGEHGSGEQPSGEQASG 106
EGE GE E+ GE GE E E GE+ E+ E G GE+ GE
Sbjct: 956 EGEEEEGEGEGEEEGEGEGEEGEGEGEEEEGEGEGEEEEGEEEGEEEGEGEE-EGEGEGE 1014
Query: 107 EQPSGE---HASGEQASG 121
E+ GE GE+ G
Sbjct: 1015 EEEEGEVEGEVEGEEGEG 1032
Score = 35.8 bits (81), Expect = 0.027
Identities = 22/68 (32%), Positives = 29/68 (42%), Gaps = 4/68 (5%)
Query: 50 EGEHTVGEQPSGEQPSGEHLSGEQPLSELESGEQPSDEQPSGEHGSGEQPSGEQASGEQP 109
EGE + E+ ++ GE EQ E E G Q Q E G E GE+ G++
Sbjct: 691 EGEKELAEKEEWKKRDGE----EQEQKEREQGHQKERNQEMEEGGEEEHGEGEEEEGDRE 746
Query: 110 SGEHASGE 117
E GE
Sbjct: 747 EEEEKEGE 754
Score = 35.8 bits (81), Expect = 0.027
Identities = 33/110 (30%), Positives = 45/110 (40%), Gaps = 14/110 (12%)
Query: 22 QPNELSGSIDHQTSVQQLPGEPAATEHAEGEHTVGEQPSGE---QPSGEHLSGE----QP 74
+ E G + + ++ GE E EGE GE+ GE + GE GE +
Sbjct: 881 EEGEGEGEEEGEGEGEEEEGEGEGEEEGEGE---GEEEEGEGKGEEEGEEGEGEGEEEEG 937
Query: 75 LSELESGEQPSDEQPS---GEHGSGEQPSGEQASGEQPSGEHASGEQASG 121
E E GE +E+ GE GE E+ GE GE GE+ G
Sbjct: 938 EGEGEDGEGEGEEEEGEWEGEEEEGEGEGEEEGEGEGEEGE-GEGEEEEG 986
Score = 35.4 bits (80), Expect = 0.035
Identities = 27/72 (37%), Positives = 31/72 (43%), Gaps = 6/72 (8%)
Query: 47 EHAEGEHTVGEQPSGEQPSGEHLSGEQPLSELES-GEQPSDEQPSGEHGSGEQPSGEQAS 105
E EGE GE E+ GE GE+ E E GE+ E E G GE GE+
Sbjct: 845 EEGEGEEEEGEGKGEEE--GEEGEGEEEGEEGEGEGEEEEGEGEGEEEGEGE---GEEEE 899
Query: 106 GEQPSGEHASGE 117
GE E GE
Sbjct: 900 GEGEGEEEGEGE 911
Score = 35.0 bits (79), Expect = 0.046
Identities = 29/87 (33%), Positives = 36/87 (41%), Gaps = 11/87 (12%)
Query: 41 GEPAATEHAEGEHTVGE--------QPSGEQPSGEHLSGEQPLSELESGEQPSDEQPSGE 92
GE E EGE GE + GE+ GE GE+ E GE +E+ GE
Sbjct: 962 GEGEGEEEGEGEGEEGEGEGEEEEGEGEGEEEEGEE-EGEEEGEGEEEGEGEGEEEEEGE 1020
Query: 93 -HGSGEQPSGEQASGEQPSGEHASGEQ 118
G E GE GE+ GE E+
Sbjct: 1021 VEGEVEGEEGE-GEGEEEEGEEEGEER 1046
Score = 34.7 bits (78), Expect = 0.060
Identities = 29/107 (27%), Positives = 43/107 (40%), Gaps = 9/107 (8%)
Query: 17 RGTSSQPNELSGSIDHQTSVQQLPGEPAATEHAEGEHTVGEQPSGEQPSGEHLSGEQPLS 76
RG +P E + + ++ GE E + E G Q Q E E
Sbjct: 683 RGEMERPGEGEKELAEKEEWKKRDGE----EQEQKEREQGHQKERNQEMEEGGEEEHGEG 738
Query: 77 ELESGEQPSDEQPSG---EHGSGEQPSG--EQASGEQPSGEHASGEQ 118
E E G++ +E+ G E G GE+ G E+ GE+ E A E+
Sbjct: 739 EEEEGDREEEEEKEGEGKEEGEGEEVEGEREKEEGERKKEERAGKEE 785
Score = 34.3 bits (77), Expect = 0.079
Identities = 29/94 (30%), Positives = 39/94 (41%), Gaps = 10/94 (10%)
Query: 28 GSIDHQTSVQQLPGEPAATEHAEGEHTVGEQPSGEQPSGEHLSGEQPLSELESGEQPSDE 87
G ++ ++ E E EGE GE+ GE GE GE E E E +E
Sbjct: 817 GEVEEGKGEREEEEEEGEGEEEEGE---GEEEEGE---GEEEEGEGK-GEEEGEEGEGEE 869
Query: 88 QPSGEHGSGEQPSGEQASGEQPSGEHASGEQASG 121
+ G GE+ GE E+ GE GE+ G
Sbjct: 870 EGEEGEGEGEEEEGEGEGEEEGEGE---GEEEEG 900
Score = 33.5 bits (75), Expect = 0.13
Identities = 32/116 (27%), Positives = 42/116 (36%), Gaps = 10/116 (8%)
Query: 14 GSARGTSSQPNELSGSIDHQTSVQQLPGEPAATE-HAEGEHTVGE-------QPSGEQPS 65
G + E G + ++ GE E EGE GE + GE+
Sbjct: 840 GEGEEEEGEGEEEEGEGKGEEEGEEGEGEEEGEEGEGEGEEEEGEGEGEEEGEGEGEEEE 899
Query: 66 GEHLSGEQPLSELESGEQPSDEQPSGEHGSGEQPSGEQASGEQPSGEHASGEQASG 121
GE E+ E E E + GE G GE E+ GE GE GE+ G
Sbjct: 900 GEGEGEEEGEGEGEEEEGEGKGEEEGEEGEGEGEE-EEGEGEGEDGE-GEGEEEEG 953
Score = 33.1 bits (74), Expect = 0.18
Identities = 23/82 (28%), Positives = 31/82 (37%), Gaps = 1/82 (1%)
Query: 41 GEPAATEHAEGEHTVGEQPSGEQPSGEHLSGEQPLSELESGEQ-PSDEQPSGEHGSGEQP 99
G A + E GE+ G GE+ L+E E ++ +EQ E G Q
Sbjct: 662 GSSGAEHWQDEEREKGEKDKGRGEMERPGEGEKELAEKEEWKKRDGEEQEQKEREQGHQK 721
Query: 100 SGEQASGEQPSGEHASGEQASG 121
Q E EH GE+ G
Sbjct: 722 ERNQEMEEGGEEEHGEGEEEEG 743
Score = 33.1 bits (74), Expect = 0.18
Identities = 32/113 (28%), Positives = 48/113 (42%), Gaps = 17/113 (15%)
Query: 18 GTSSQPNELSGSIDHQTSVQQLPGEPAATEHAEGEHTVGEQPSGEQPSGEHLSGEQPLSE 77
G + E G + +++ GE E EGE E+ +G++ GE G+Q E
Sbjct: 743 GDREEEEEKEGEGKEEGEGEEVEGE---REKEEGERKK-EERAGKEEKGEE-EGDQGEGE 797
Query: 78 LESGEQPSDEQPSG--------EHGSGE-QPSGEQASGEQPSGEHASGEQASG 121
E E +E+ G E G GE + E+ GE+ GE GE+ G
Sbjct: 798 EEETEGRGEEKEEGGEVEGGEVEEGKGEREEEEEEGEGEEEEGE---GEEEEG 847
Score = 32.7 bits (73), Expect = 0.23
Identities = 28/86 (32%), Positives = 38/86 (44%), Gaps = 10/86 (11%)
Query: 41 GEPAATEHAEGEHTVGEQPSGEQPSGEHLSGEQPLSELESGEQPSDEQPSGE--HGSGEQ 98
GE TE GE ++ GE GE G+ E E + +E+ GE G GE+
Sbjct: 796 GEEEETE-GRGEE---KEEGGEVEGGEVEEGKGEREEEEEEGEGEEEEGEGEEEEGEGEE 851
Query: 99 PSGE---QASGEQPSGEHASGEQASG 121
GE + GE+ GE GE+ G
Sbjct: 852 EEGEGKGEEEGEEGEGEE-EGEEGEG 876
Score = 30.4 bits (67), Expect = 1.1
Identities = 26/81 (32%), Positives = 33/81 (40%), Gaps = 8/81 (9%)
Query: 41 GEPAATEHAEGEHTVGEQPSGEQPSGEHLSGEQPLSELESGEQPSDEQPSGEHGSGEQPS 100
GE E EGE GE E+ GE + GE E E GE +E+ E G +
Sbjct: 995 GEEEGEEEGEGEEE-GEGEGEEEEEGE-VEGEV---EGEEGEGEGEEEEGEEEGEEREKE 1049
Query: 101 GEQASGEQPSGEHASGEQASG 121
GE GE+ E+ G
Sbjct: 1050 GE---GEENRRNREEEEEEEG 1067
Score = 28.5 bits (62), Expect = 4.3
Identities = 24/78 (30%), Positives = 33/78 (42%), Gaps = 6/78 (7%)
Query: 41 GEPAATEHAEGEHTVGEQPSGEQPSGEHLSGEQPLSELESGEQPSDEQPSGEHGSGEQPS 100
GE E EGE V + GE+ GE GE+ E E GE+ E E+ +
Sbjct: 1009 GEGEGEEEEEGE--VEGEVEGEEGEGE---GEEEEGE-EEGEEREKEGEGEENRRNREEE 1062
Query: 101 GEQASGEQPSGEHASGEQ 118
E+ Q +GE + Q
Sbjct: 1063 EEEEGKYQETGEEENERQ 1080
>gi|150170670 piccolo isoform 2 [Homo sapiens]
Length = 4935
Score = 41.2 bits (95), Expect = 6e-04
Identities = 26/94 (27%), Positives = 39/94 (41%), Gaps = 2/94 (2%)
Query: 38 QLPGEPAATEHAEGE-HTVGEQPSGEQPSGEHLSGEQPLSELESGEQPSDEQPSGEHGSG 96
QLPG G +QP +P + +P + +PS +QP
Sbjct: 472 QLPGPAKPPPQQPGPAKPPPQQPGSAKPPSQQPGSTKPPPQQPGPAKPSPQQPGSTKPPS 531
Query: 97 EQPSGEQASGEQPSGEHASGEQASGAPISSTSTG 130
+QP + S +QPS S +Q S P+S T +G
Sbjct: 532 QQPGSAKPSAQQPSPAKPSAQQ-STKPVSQTGSG 564
Score = 32.7 bits (73), Expect = 0.23
Identities = 28/109 (25%), Positives = 40/109 (36%), Gaps = 21/109 (19%)
Query: 14 GSARGTSSQPNELSGSIDHQTSVQQLPGEPAATEHAEGEHTVGEQPSGEQPSGEHLSGEQ 73
G A+ QP S + P +P + PS +QP +Q
Sbjct: 485 GPAKPPPQQPGSAKPPSQQPGSTKPPPQQPGPAK-----------PSPQQPGSTKPPSQQ 533
Query: 74 PLSELESGEQPSDEQPSGEH--------GSGE--QPSGEQASGEQPSGE 112
P S S +QPS +PS + GSG+ QP S +QP +
Sbjct: 534 PGSAKPSAQQPSPAKPSAQQSTKPVSQTGSGKPLQPPTVSPSAKQPPSQ 582
Score = 32.0 bits (71), Expect = 0.39
Identities = 30/109 (27%), Positives = 46/109 (42%), Gaps = 6/109 (5%)
Query: 17 RGTSSQPNELSGSIDHQTSVQQ-LPGEPAATEHAEGEHTVGEQPSGEQPSG-EHLSGEQP 74
RG S +P+ S S + +QQ PG+P A + + G QPSG +QP
Sbjct: 290 RGESVKPSLPSPS---KPPIQQPTPGKPPAQQPGHEKSQPGPAKPPAQPSGLTKPLAQQP 346
Query: 75 LSELESGEQPSDEQPSGEHGSGEQPSGEQASGEQPSGEHASGEQASGAP 123
+ + P +P + +P +Q E+PS E G +A P
Sbjct: 347 GTVKPPVQPPGTTKPPAQPLGPAKPPAQQTGSEKPSSEQ-PGPKALAQP 394
Score = 30.8 bits (68), Expect = 0.87
Identities = 23/104 (22%), Positives = 38/104 (36%), Gaps = 13/104 (12%)
Query: 40 PGEPAATEHAEGEHTVGEQPSGEQPSGEHLS-----GEQPLSELESGEQPSDE------- 87
P +P + T E+PS EQP + L+ G+ P + + P+ +
Sbjct: 362 PAQPLGPAKPPAQQTGSEKPSSEQPGPKALAQPPGVGKTPAQQPGPAKPPTQQVGTPKPL 421
Query: 88 -QPSGEHGSGEQPSGEQASGEQPSGEHASGEQASGAPISSTSTG 130
Q G + P + +QP +QA S+ TG
Sbjct: 422 AQQPGLQSPAKAPGPTKTPVQQPGPGKIPAQQAGPGKTSAQQTG 465
Score = 28.9 bits (63), Expect = 3.3
Identities = 23/100 (23%), Positives = 39/100 (39%), Gaps = 2/100 (2%)
Query: 33 QTSVQQL-PGEPAATEHAEGEHTVGEQPSGEQPSGEHLSGEQPLSELESGEQPSDEQPSG 91
+T VQQ PG+ A + G+ T +Q +P + +P + +P +QP
Sbjct: 438 KTPVQQPGPGKIPAQQAGPGK-TSAQQTGPTKPPSQLPGPAKPPPQQPGPAKPPPQQPGS 496
Query: 92 EHGSGEQPSGEQASGEQPSGEHASGEQASGAPISSTSTGT 131
+QP + +QP S +Q S G+
Sbjct: 497 AKPPSQQPGSTKPPPQQPGPAKPSPQQPGSTKPPSQQPGS 536
Score = 27.7 bits (60), Expect = 7.4
Identities = 18/67 (26%), Positives = 28/67 (41%), Gaps = 2/67 (2%)
Query: 57 EQPSGEQPSGEHLSGEQPLSELESGEQPSDEQPSGEHGSGEQPSGEQASGEQPSGEHASG 116
+ P +P + L +P ++ E+PS EQP + + QP G + Q G
Sbjct: 354 QPPGTTKPPAQPLGPAKPPAQQTGSEKPSSEQPGPK--ALAQPPGVGKTPAQQPGPAKPP 411
Query: 117 EQASGAP 123
Q G P
Sbjct: 412 TQQVGTP 418
>gi|150378539 piccolo isoform 1 [Homo sapiens]
Length = 5142
Score = 41.2 bits (95), Expect = 6e-04
Identities = 26/94 (27%), Positives = 39/94 (41%), Gaps = 2/94 (2%)
Query: 38 QLPGEPAATEHAEGE-HTVGEQPSGEQPSGEHLSGEQPLSELESGEQPSDEQPSGEHGSG 96
QLPG G +QP +P + +P + +PS +QP
Sbjct: 472 QLPGPAKPPPQQPGPAKPPPQQPGSAKPPSQQPGSTKPPPQQPGPAKPSPQQPGSTKPPS 531
Query: 97 EQPSGEQASGEQPSGEHASGEQASGAPISSTSTG 130
+QP + S +QPS S +Q S P+S T +G
Sbjct: 532 QQPGSAKPSAQQPSPAKPSAQQ-STKPVSQTGSG 564
Score = 32.7 bits (73), Expect = 0.23
Identities = 28/109 (25%), Positives = 40/109 (36%), Gaps = 21/109 (19%)
Query: 14 GSARGTSSQPNELSGSIDHQTSVQQLPGEPAATEHAEGEHTVGEQPSGEQPSGEHLSGEQ 73
G A+ QP S + P +P + PS +QP +Q
Sbjct: 485 GPAKPPPQQPGSAKPPSQQPGSTKPPPQQPGPAK-----------PSPQQPGSTKPPSQQ 533
Query: 74 PLSELESGEQPSDEQPSGEH--------GSGE--QPSGEQASGEQPSGE 112
P S S +QPS +PS + GSG+ QP S +QP +
Sbjct: 534 PGSAKPSAQQPSPAKPSAQQSTKPVSQTGSGKPLQPPTVSPSAKQPPSQ 582
Score = 32.0 bits (71), Expect = 0.39
Identities = 30/109 (27%), Positives = 46/109 (42%), Gaps = 6/109 (5%)
Query: 17 RGTSSQPNELSGSIDHQTSVQQ-LPGEPAATEHAEGEHTVGEQPSGEQPSG-EHLSGEQP 74
RG S +P+ S S + +QQ PG+P A + + G QPSG +QP
Sbjct: 290 RGESVKPSLPSPS---KPPIQQPTPGKPPAQQPGHEKSQPGPAKPPAQPSGLTKPLAQQP 346
Query: 75 LSELESGEQPSDEQPSGEHGSGEQPSGEQASGEQPSGEHASGEQASGAP 123
+ + P +P + +P +Q E+PS E G +A P
Sbjct: 347 GTVKPPVQPPGTTKPPAQPLGPAKPPAQQTGSEKPSSEQ-PGPKALAQP 394
Score = 30.8 bits (68), Expect = 0.87
Identities = 23/104 (22%), Positives = 38/104 (36%), Gaps = 13/104 (12%)
Query: 40 PGEPAATEHAEGEHTVGEQPSGEQPSGEHLS-----GEQPLSELESGEQPSDE------- 87
P +P + T E+PS EQP + L+ G+ P + + P+ +
Sbjct: 362 PAQPLGPAKPPAQQTGSEKPSSEQPGPKALAQPPGVGKTPAQQPGPAKPPTQQVGTPKPL 421
Query: 88 -QPSGEHGSGEQPSGEQASGEQPSGEHASGEQASGAPISSTSTG 130
Q G + P + +QP +QA S+ TG
Sbjct: 422 AQQPGLQSPAKAPGPTKTPVQQPGPGKIPAQQAGPGKTSAQQTG 465
Score = 28.9 bits (63), Expect = 3.3
Identities = 23/100 (23%), Positives = 39/100 (39%), Gaps = 2/100 (2%)
Query: 33 QTSVQQL-PGEPAATEHAEGEHTVGEQPSGEQPSGEHLSGEQPLSELESGEQPSDEQPSG 91
+T VQQ PG+ A + G+ T +Q +P + +P + +P +QP
Sbjct: 438 KTPVQQPGPGKIPAQQAGPGK-TSAQQTGPTKPPSQLPGPAKPPPQQPGPAKPPPQQPGS 496
Query: 92 EHGSGEQPSGEQASGEQPSGEHASGEQASGAPISSTSTGT 131
+QP + +QP S +Q S G+
Sbjct: 497 AKPPSQQPGSTKPPPQQPGPAKPSPQQPGSTKPPSQQPGS 536
Score = 27.7 bits (60), Expect = 7.4
Identities = 18/67 (26%), Positives = 28/67 (41%), Gaps = 2/67 (2%)
Query: 57 EQPSGEQPSGEHLSGEQPLSELESGEQPSDEQPSGEHGSGEQPSGEQASGEQPSGEHASG 116
+ P +P + L +P ++ E+PS EQP + + QP G + Q G
Sbjct: 354 QPPGTTKPPAQPLGPAKPPAQQTGSEKPSSEQPGPK--ALAQPPGVGKTPAQQPGPAKPP 411
Query: 117 EQASGAP 123
Q G P
Sbjct: 412 TQQVGTP 418
>gi|239746922 PREDICTED: similar to cancer/testis antigen family
147, member B1 isoform 2 [Homo sapiens]
Length = 294
Score = 40.8 bits (94), Expect = 8e-04
Identities = 22/70 (31%), Positives = 41/70 (58%), Gaps = 3/70 (4%)
Query: 39 LPGEPAATEHAEGEHTVGEQPSGEQPSGEHLSGEQPLSELESGEQPSDEQPSGEHGSGEQ 98
+P + AE E+P+ E+P+ E + E+ L+E E+ E+P+ E+P+ E S E+
Sbjct: 188 VPEPEVPADLAEMAREPAEEPAEEKPTEE--AAEEELAE-EAAEEPAKEEPAAEEESAEE 244
Query: 99 PSGEQASGEQ 108
P+ E+A+ +
Sbjct: 245 PATEEAAAPE 254
Score = 29.3 bits (64), Expect = 2.5
Identities = 14/49 (28%), Positives = 28/49 (57%), Gaps = 7/49 (14%)
Query: 79 ESGEQPSDEQPSGEHG-------SGEQPSGEQASGEQPSGEHASGEQAS 120
E E+P++E+P+ E + E+P+ E+ + E+ S E + E+A+
Sbjct: 203 EPAEEPAEEKPTEEAAEEELAEEAAEEPAKEEPAAEEESAEEPATEEAA 251
Score = 27.7 bits (60), Expect = 7.4
Identities = 21/85 (24%), Positives = 37/85 (43%), Gaps = 14/85 (16%)
Query: 40 PGEPAATEHAEGEHTVGEQPSGEQPSGEHLSGEQPLSELESGEQPSDEQPSG-------E 92
P E TE A E E + E+P+ E +P +E ES E+P+ E+ + +
Sbjct: 208 PAEEKPTEEAAEEELAEE--AAEEPAKE-----EPAAEEESAEEPATEEAAAPEEVTKYQ 260
Query: 93 HGSGEQPSGEQASGEQPSGEHASGE 117
H ++ + + A E+ + E
Sbjct: 261 HEKWDEEAQDAAGKEEKEEKEKDAE 285
>gi|126090892 aggrecan isoform 2 precursor [Homo sapiens]
Length = 2416
Score = 40.4 bits (93), Expect = 0.001
Identities = 40/134 (29%), Positives = 53/134 (39%), Gaps = 16/134 (11%)
Query: 14 GSARGTSSQPNELSGSIDHQTSVQQLPGEPAATEHAEGE----HTVGEQPSGEQPSGEHL 69
G G S ++SG S +L G+ + + GE V QPSG +
Sbjct: 1576 GEISGLPSSELDISGRASGLPSGTELSGQASGSPDVSGEIPGLFGVSGQPSGFPDTSGET 1635
Query: 70 SGEQPLSELESGEQPSDEQPSGEHGSGEQPSG-EQASGE---------QPSGEHASGEQA 119
SG LS L SG+ + SG QP G SGE QPSG
Sbjct: 1636 SGVTELSGLSSGQPGISGEASGVLYGTSQPFGITDLSGETSGVPDLSGQPSGLPGFSGAT 1695
Query: 120 SGAP--ISSTSTGT 131
SG P +S T++G+
Sbjct: 1696 SGVPDLVSGTTSGS 1709
Score = 40.0 bits (92), Expect = 0.001
Identities = 29/92 (31%), Positives = 41/92 (44%), Gaps = 9/92 (9%)
Query: 41 GEPAATEHAEGEHTVGEQPSGEQPSGEHLSGEQPLSELESGEQPSDEQPSGEHGSGEQPS 100
GE T +E + PSG + SG + LS L SG++ SG+ G+ PS
Sbjct: 1438 GEGLETSASEVGTDLSGLPSGREGLETSASGAEDLSGLPSGKEDLVGSASGDLDLGKLPS 1497
Query: 101 GEQASGEQP---------SGEHASGEQASGAP 123
G SG+ P SGE++ + SG P
Sbjct: 1498 GTLGSGQAPETSGLPSGFSGEYSGVDLGSGPP 1529
Score = 36.6 bits (83), Expect = 0.016
Identities = 39/129 (30%), Positives = 48/129 (37%), Gaps = 12/129 (9%)
Query: 5 LLLMSLYLLGSARGTSSQPNELSGSIDHQTSVQQLPGEPAATEHAEGEHTVGEQPSGEQP 64
+L S +G G S L S+ + LP A G V E PSGE
Sbjct: 1342 VLETSTSAVGDLSGLPSGGEVLEISVSGVEDISGLPSGEVVETSASGIEDVSELPSGEGL 1401
Query: 65 SGEHLSGEQPLSELESGEQPSDEQPSGEHGSGEQPSG----EQASGE-------QPSGEH 113
SG + LS L SGE+ + SG PSG E ++ E PSG
Sbjct: 1402 E-TSASGVEDLSRLPSGEEVLEISASGFGDLSGLPSGGEGLETSASEVGTDLSGLPSGRE 1460
Query: 114 ASGEQASGA 122
ASGA
Sbjct: 1461 GLETSASGA 1469
Score = 35.8 bits (81), Expect = 0.027
Identities = 37/120 (30%), Positives = 50/120 (41%), Gaps = 17/120 (14%)
Query: 14 GSARGTSSQPNELSGSIDHQTSVQQLPGEPAATEHAEGEHTV----GEQPSGEQPSGEHL 69
G+ G+ + + + S+ +T V+ + P A E EG + G SGEH
Sbjct: 1806 GAYYGSGTPSSFPTVSLVDRTLVESVTQAPTAQEAGEGPSGILELSGAHSGAPDMSGEH- 1864
Query: 70 SGEQPLSELESG------EQPSDEQPSGEHGSGEQPSGEQASGEQPSGEHASGEQASGAP 123
SG LS L+SG E P SG+ S SGE + SGE ASG P
Sbjct: 1865 SGFLDLSGLQSGLIEPSGEPPGTPYFSGDFASTTNVSGESSVAMGTSGE------ASGLP 1918
Score = 34.3 bits (77), Expect = 0.079
Identities = 36/96 (37%), Positives = 40/96 (41%), Gaps = 21/96 (21%)
Query: 54 TVGEQPSGEQ---------------PSGEHL----SGEQPLSELESGEQPSDEQPSGEHG 94
TVGE PSG + PSGE L SG LS L SGE P E
Sbjct: 933 TVGELPSGAEILEGSASGVGDLSGLPSGEVLETSASGVGDLSGLPSGEVLETTAPGVEDI 992
Query: 95 SGEQPSGEQASGEQPSGEHASGEQASGAPISSTSTG 130
SG PSGE P E SG SG + +T+ G
Sbjct: 993 SG-LPSGEVLETTAPGVEDISG-LPSGEVLETTAPG 1026
Score = 31.6 bits (70), Expect = 0.51
Identities = 28/97 (28%), Positives = 35/97 (36%), Gaps = 11/97 (11%)
Query: 36 VQQLPGEPAATEHAEGEHTVGEQPSGEQPSGEHLSGEQPLSELESGEQPSDEQ------- 88
V +LP A G + PSGE+ SG LS L SG + +
Sbjct: 1392 VSELPSGEGLETSASGVEDLSRLPSGEEVLEISASGFGDLSGLPSGGEGLETSASEVGTD 1451
Query: 89 ----PSGEHGSGEQPSGEQASGEQPSGEHASGEQASG 121
PSG G SG + PSG+ ASG
Sbjct: 1452 LSGLPSGREGLETSASGAEDLSGLPSGKEDLVGSASG 1488
Score = 30.0 bits (66), Expect = 1.5
Identities = 25/70 (35%), Positives = 30/70 (42%), Gaps = 7/70 (10%)
Query: 64 PSGEHLSGEQPLSELESGEQPSDEQPSGEHGSGEQPSG-EQASGEQPSGEHASGEQASGA 122
PSG LSG+ S SGE P G G QPSG SGE SG +
Sbjct: 1596 PSGTELSGQASGSPDVSGEIP------GLFGVSGQPSGFPDTSGETSGVTELSGLSSGQP 1649
Query: 123 PISSTSTGTI 132
IS ++G +
Sbjct: 1650 GISGEASGVL 1659
Score = 29.3 bits (64), Expect = 2.5
Identities = 24/66 (36%), Positives = 31/66 (46%), Gaps = 6/66 (9%)
Query: 70 SGEQPLSELE-SGEQPSDEQPSGEHGSGEQPSGEQASGEQPSGE-----HASGEQASGAP 123
+GE P LE SG SGEH SG Q+ +PSGE + SG+ AS
Sbjct: 1840 AGEGPSGILELSGAHSGAPDMSGEHSGFLDLSGLQSGLIEPSGEPPGTPYFSGDFASTTN 1899
Query: 124 ISSTST 129
+S S+
Sbjct: 1900 VSGESS 1905
Score = 27.3 bits (59), Expect = 9.6
Identities = 33/104 (31%), Positives = 44/104 (42%), Gaps = 13/104 (12%)
Query: 35 SVQQLPGE---PAATEHAEGEHTVGEQP---SGEQPSGEHL--SGEQPLSELESGEQPSD 86
SV+ P E P+ E + E+P S PS L SGE+ + SG+
Sbjct: 814 SVELFPSEEPFPSKEPSPSEEPSASEEPYTPSPPVPSWTELPSSGEESGAPDVSGDFTGS 873
Query: 87 EQPSGEHGSGEQPSGEQASGEQPSGEHAS----GEQASGAPISS 126
SG Q SG++ASG PSG+ S SG P+ S
Sbjct: 874 GDVSGHLDFSGQLSGDRASG-LPSGDLDSSGLTSTVGSGLPVES 916
>gi|126090883 aggrecan isoform 1 precursor [Homo sapiens]
Length = 2317
Score = 40.4 bits (93), Expect = 0.001
Identities = 40/134 (29%), Positives = 53/134 (39%), Gaps = 16/134 (11%)
Query: 14 GSARGTSSQPNELSGSIDHQTSVQQLPGEPAATEHAEGE----HTVGEQPSGEQPSGEHL 69
G G S ++SG S +L G+ + + GE V QPSG +
Sbjct: 1576 GEISGLPSSELDISGRASGLPSGTELSGQASGSPDVSGEIPGLFGVSGQPSGFPDTSGET 1635
Query: 70 SGEQPLSELESGEQPSDEQPSGEHGSGEQPSG-EQASGE---------QPSGEHASGEQA 119
SG LS L SG+ + SG QP G SGE QPSG
Sbjct: 1636 SGVTELSGLSSGQPGISGEASGVLYGTSQPFGITDLSGETSGVPDLSGQPSGLPGFSGAT 1695
Query: 120 SGAP--ISSTSTGT 131
SG P +S T++G+
Sbjct: 1696 SGVPDLVSGTTSGS 1709
Score = 40.0 bits (92), Expect = 0.001
Identities = 29/92 (31%), Positives = 41/92 (44%), Gaps = 9/92 (9%)
Query: 41 GEPAATEHAEGEHTVGEQPSGEQPSGEHLSGEQPLSELESGEQPSDEQPSGEHGSGEQPS 100
GE T +E + PSG + SG + LS L SG++ SG+ G+ PS
Sbjct: 1438 GEGLETSASEVGTDLSGLPSGREGLETSASGAEDLSGLPSGKEDLVGSASGDLDLGKLPS 1497
Query: 101 GEQASGEQP---------SGEHASGEQASGAP 123
G SG+ P SGE++ + SG P
Sbjct: 1498 GTLGSGQAPETSGLPSGFSGEYSGVDLGSGPP 1529
Score = 36.6 bits (83), Expect = 0.016
Identities = 39/129 (30%), Positives = 48/129 (37%), Gaps = 12/129 (9%)
Query: 5 LLLMSLYLLGSARGTSSQPNELSGSIDHQTSVQQLPGEPAATEHAEGEHTVGEQPSGEQP 64
+L S +G G S L S+ + LP A G V E PSGE
Sbjct: 1342 VLETSTSAVGDLSGLPSGGEVLEISVSGVEDISGLPSGEVVETSASGIEDVSELPSGEGL 1401
Query: 65 SGEHLSGEQPLSELESGEQPSDEQPSGEHGSGEQPSG----EQASGE-------QPSGEH 113
SG + LS L SGE+ + SG PSG E ++ E PSG
Sbjct: 1402 E-TSASGVEDLSRLPSGEEVLEISASGFGDLSGLPSGGEGLETSASEVGTDLSGLPSGRE 1460
Query: 114 ASGEQASGA 122
ASGA
Sbjct: 1461 GLETSASGA 1469
Score = 35.8 bits (81), Expect = 0.027
Identities = 37/120 (30%), Positives = 50/120 (41%), Gaps = 17/120 (14%)
Query: 14 GSARGTSSQPNELSGSIDHQTSVQQLPGEPAATEHAEGEHTV----GEQPSGEQPSGEHL 69
G+ G+ + + + S+ +T V+ + P A E EG + G SGEH
Sbjct: 1806 GAYYGSGTPSSFPTVSLVDRTLVESVTQAPTAQEAGEGPSGILELSGAHSGAPDMSGEH- 1864
Query: 70 SGEQPLSELESG------EQPSDEQPSGEHGSGEQPSGEQASGEQPSGEHASGEQASGAP 123
SG LS L+SG E P SG+ S SGE + SGE ASG P
Sbjct: 1865 SGFLDLSGLQSGLIEPSGEPPGTPYFSGDFASTTNVSGESSVAMGTSGE------ASGLP 1918
Score = 34.3 bits (77), Expect = 0.079
Identities = 36/96 (37%), Positives = 40/96 (41%), Gaps = 21/96 (21%)
Query: 54 TVGEQPSGEQ---------------PSGEHL----SGEQPLSELESGEQPSDEQPSGEHG 94
TVGE PSG + PSGE L SG LS L SGE P E
Sbjct: 933 TVGELPSGAEILEGSASGVGDLSGLPSGEVLETSASGVGDLSGLPSGEVLETTAPGVEDI 992
Query: 95 SGEQPSGEQASGEQPSGEHASGEQASGAPISSTSTG 130
SG PSGE P E SG SG + +T+ G
Sbjct: 993 SG-LPSGEVLETTAPGVEDISG-LPSGEVLETTAPG 1026
Score = 31.6 bits (70), Expect = 0.51
Identities = 28/97 (28%), Positives = 35/97 (36%), Gaps = 11/97 (11%)
Query: 36 VQQLPGEPAATEHAEGEHTVGEQPSGEQPSGEHLSGEQPLSELESGEQPSDEQ------- 88
V +LP A G + PSGE+ SG LS L SG + +
Sbjct: 1392 VSELPSGEGLETSASGVEDLSRLPSGEEVLEISASGFGDLSGLPSGGEGLETSASEVGTD 1451
Query: 89 ----PSGEHGSGEQPSGEQASGEQPSGEHASGEQASG 121
PSG G SG + PSG+ ASG
Sbjct: 1452 LSGLPSGREGLETSASGAEDLSGLPSGKEDLVGSASG 1488
Score = 30.0 bits (66), Expect = 1.5
Identities = 25/70 (35%), Positives = 30/70 (42%), Gaps = 7/70 (10%)
Query: 64 PSGEHLSGEQPLSELESGEQPSDEQPSGEHGSGEQPSG-EQASGEQPSGEHASGEQASGA 122
PSG LSG+ S SGE P G G QPSG SGE SG +
Sbjct: 1596 PSGTELSGQASGSPDVSGEIP------GLFGVSGQPSGFPDTSGETSGVTELSGLSSGQP 1649
Query: 123 PISSTSTGTI 132
IS ++G +
Sbjct: 1650 GISGEASGVL 1659
Score = 29.3 bits (64), Expect = 2.5
Identities = 24/66 (36%), Positives = 31/66 (46%), Gaps = 6/66 (9%)
Query: 70 SGEQPLSELE-SGEQPSDEQPSGEHGSGEQPSGEQASGEQPSGE-----HASGEQASGAP 123
+GE P LE SG SGEH SG Q+ +PSGE + SG+ AS
Sbjct: 1840 AGEGPSGILELSGAHSGAPDMSGEHSGFLDLSGLQSGLIEPSGEPPGTPYFSGDFASTTN 1899
Query: 124 ISSTST 129
+S S+
Sbjct: 1900 VSGESS 1905
Score = 27.3 bits (59), Expect = 9.6
Identities = 33/104 (31%), Positives = 44/104 (42%), Gaps = 13/104 (12%)
Query: 35 SVQQLPGE---PAATEHAEGEHTVGEQP---SGEQPSGEHL--SGEQPLSELESGEQPSD 86
SV+ P E P+ E + E+P S PS L SGE+ + SG+
Sbjct: 814 SVELFPSEEPFPSKEPSPSEEPSASEEPYTPSPPVPSWTELPSSGEESGAPDVSGDFTGS 873
Query: 87 EQPSGEHGSGEQPSGEQASGEQPSGEHAS----GEQASGAPISS 126
SG Q SG++ASG PSG+ S SG P+ S
Sbjct: 874 GDVSGHLDFSGQLSGDRASG-LPSGDLDSSGLTSTVGSGLPVES 916
>gi|19923082 expressed in prostate and testis [Homo sapiens]
Length = 126
Score = 40.4 bits (93), Expect = 0.001
Identities = 23/84 (27%), Positives = 33/84 (39%), Gaps = 10/84 (11%)
Query: 132 ILNCYTCAYMNDQGKCLRGEGTCITQNSQQCMLKKIFE-GGKLQFMVQGCENMCPSMNLF 190
I+ C C KC RG G C + CM+ ++F+ G GC C +
Sbjct: 45 IVQCRMCHLQFPGEKCSRGRGICTATTEEACMVGRMFKRDGNPWLTFMGCLKNCADVK-- 102
Query: 191 SHGTRMQII-----CCRNQSFCNK 209
G R + CCR+ CN+
Sbjct: 103 --GIRWSVYLVNFRCCRSHDLCNE 124
>gi|139394599 hypermethylated in cancer 2 [Homo sapiens]
Length = 615
Score = 40.0 bits (92), Expect = 0.001
Identities = 34/117 (29%), Positives = 51/117 (43%), Gaps = 4/117 (3%)
Query: 18 GTSSQPNELSGSIDHQTSVQQLPG-EPAAT-EHAEGEHTVGE-QPSGEQPSGEHLSGEQP 74
GT +P +L G+ D+ S+ + PG +P + H+ + G+ +P P +G +
Sbjct: 300 GTPDEPMDLEGAEDNHLSLLEAPGGQPRKSLRHSTRKKEWGKKEPVAGSPFERREAGPKG 359
Query: 75 LSELESGEQPSDEQPSGEHGSGEQPSGEQASGEQP-SGEHASGEQASGAPISSTSTG 130
E GE D P+G SG PSG P E +G+ AS S S G
Sbjct: 360 PCPGEEGEGVGDRVPNGILASGAGPSGPYGEPPYPCKEEEENGKDASEDSAQSGSEG 416
>gi|149999615 variable charge, X-linked 3B [Homo sapiens]
Length = 216
Score = 39.7 bits (91), Expect = 0.002
Identities = 25/115 (21%), Positives = 52/115 (45%), Gaps = 10/115 (8%)
Query: 14 GSARGTSSQPNELSGSIDHQTSV-----QQLPGEPAATEHAEGEHTVGEQPSGEQPSGEH 68
G+ SQ +EL + ++ V Q+ E ++ +E E + ++ E+P +
Sbjct: 98 GTQHDPLSQESELEEPLSQESEVEEPLSQESQVEEPLSQESEVEEPLSQESQVEEPLSQE 157
Query: 69 LSGEQPLSELESGEQPSD-----EQPSGEHGSGEQPSGEQASGEQPSGEHASGEQ 118
E+PLS+ E+P E+P + E+P +++ E+P + + E+
Sbjct: 158 SEVEEPLSQESQVEEPLSQESEMEEPLSQESQVEEPLSQESEMEEPLSQESEMEE 212
Score = 39.3 bits (90), Expect = 0.002
Identities = 29/131 (22%), Positives = 56/131 (42%), Gaps = 21/131 (16%)
Query: 15 SARGTSSQPNE------------LSGSIDHQTSVQQLPGEPAATEHAEGEHTVGEQPSGE 62
+A G S QP++ +S H Q+ E ++ +E E + ++ E
Sbjct: 72 AAPGPSDQPSQELPQHELPPEEPVSEGTQHDPLSQESELEEPLSQESEVEEPLSQESQVE 131
Query: 63 QPSGEHLSGEQPLSELESGEQPSD-----EQPSGEHGSGEQPSGEQASGEQPSGEHASGE 117
+P + E+PLS+ E+P E+P + E+P +++ E+P + + E
Sbjct: 132 EPLSQESEVEEPLSQESQVEEPLSQESEVEEPLSQESQVEEPLSQESEMEEPLSQESQVE 191
Query: 118 QASGAPISSTS 128
+ P+S S
Sbjct: 192 E----PLSQES 198
>gi|66932943 variable charge, X chromosome [Homo sapiens]
Length = 206
Score = 39.3 bits (90), Expect = 0.002
Identities = 26/121 (21%), Positives = 52/121 (42%), Gaps = 17/121 (14%)
Query: 15 SARGTSSQPNE------------LSGSIDHQTSVQQLPGEPAATEHAEGEHTVGEQPSGE 62
+A G S QP++ +S H Q+ E ++ +E E + ++ E
Sbjct: 72 AAPGPSDQPSQELPQHELPPEEPVSEGTQHDPLSQEAELEEPLSQESEVEEPLSQESQVE 131
Query: 63 QPSGEHLSGEQPLSELESGEQPSD-----EQPSGEHGSGEQPSGEQASGEQPSGEHASGE 117
+P + E+PLS+ E+P E+P + E+P +++ E+P + + E
Sbjct: 132 EPLSQESEVEEPLSQESQVEEPLSQESEVEEPLSQESQVEEPLSQESEMEEPLSQESQVE 191
Query: 118 Q 118
+
Sbjct: 192 E 192
Score = 38.9 bits (89), Expect = 0.003
Identities = 23/108 (21%), Positives = 48/108 (44%), Gaps = 6/108 (5%)
Query: 16 ARGTSSQPNELSGSIDHQTSVQQLPGEPAATEHAEGEHTVGEQPSGEQPSGEHLSGEQPL 75
+ GT P ++ S + EP + E ++ E + ++ E+P + E+PL
Sbjct: 96 SEGTQHDPLSQEAELEEPLSQESEVEEPLSQE-SQVEEPLSQESEVEEPLSQESQVEEPL 154
Query: 76 SELESGEQPSD-----EQPSGEHGSGEQPSGEQASGEQPSGEHASGEQ 118
S+ E+P E+P + E+P +++ E+P + + E+
Sbjct: 155 SQESEVEEPLSQESQVEEPLSQESEMEEPLSQESQVEEPPSQESEMEE 202
>gi|44890059 involucrin [Homo sapiens]
Length = 585
Score = 38.1 bits (87), Expect = 0.005
Identities = 25/87 (28%), Positives = 38/87 (43%)
Query: 37 QQLPGEPAATEHAEGEHTVGEQPSGEQPSGEHLSGEQPLSELESGEQPSDEQPSGEHGSG 96
QQ G+ +E EG+ + EQ G+ EH G+ + E + G+ EQ G+
Sbjct: 237 QQQEGQLELSEQQEGQLELSEQQEGQLKHLEHQEGQLEVPEEQMGQLKYLEQQEGQLKHL 296
Query: 97 EQPSGEQASGEQPSGEHASGEQASGAP 123
+Q + EQ G+ EQ G P
Sbjct: 297 DQQEKQPELPEQQMGQLKHLEQQEGQP 323
Score = 35.0 bits (79), Expect = 0.046
Identities = 23/85 (27%), Positives = 36/85 (42%)
Query: 37 QQLPGEPAATEHAEGEHTVGEQPSGEQPSGEHLSGEQPLSELESGEQPSDEQPSGEHGSG 96
+Q G+ E EG+ + EQ G+ + G+ LSE + G+ EQ G+
Sbjct: 207 EQQEGQLELPEQQEGQLELPEQQEGQLELPQQQEGQLELSEQQEGQLELSEQQEGQLKHL 266
Query: 97 EQPSGEQASGEQPSGEHASGEQASG 121
E G+ E+ G+ EQ G
Sbjct: 267 EHQEGQLEVPEEQMGQLKYLEQQEG 291
Score = 32.7 bits (73), Expect = 0.23
Identities = 22/87 (25%), Positives = 36/87 (41%)
Query: 37 QQLPGEPAATEHAEGEHTVGEQPSGEQPSGEHLSGEQPLSELESGEQPSDEQPSGEHGSG 96
+Q G+ E EG+ + +Q G+ E G+ LSE + G+ E G+
Sbjct: 217 EQQEGQLELPEQQEGQLELPQQQEGQLELSEQQEGQLELSEQQEGQLKHLEHQEGQLEVP 276
Query: 97 EQPSGEQASGEQPSGEHASGEQASGAP 123
E+ G+ EQ G+ +Q P
Sbjct: 277 EEQMGQLKYLEQQEGQLKHLDQQEKQP 303
Score = 32.3 bits (72), Expect = 0.30
Identities = 32/108 (29%), Positives = 47/108 (43%), Gaps = 11/108 (10%)
Query: 25 ELSGSIDHQTSV-QQLPGEPAATEHAEGEHTVGEQPSG-----EQPSGE--HLSGEQ--- 73
ELS + Q + +Q G+ EH EG+ V E+ G EQ G+ HL ++
Sbjct: 244 ELSEQQEGQLELSEQQEGQLKHLEHQEGQLEVPEEQMGQLKYLEQQEGQLKHLDQQEKQP 303
Query: 74 PLSELESGEQPSDEQPSGEHGSGEQPSGEQASGEQPSGEHASGEQASG 121
L E + G+ EQ G+ EQ G+ E+ G+ EQ G
Sbjct: 304 ELPEQQMGQLKHLEQQEGQPKHLEQQEGQLEQLEEQEGQLKHLEQQEG 351
Score = 27.7 bits (60), Expect = 7.4
Identities = 21/90 (23%), Positives = 37/90 (41%), Gaps = 3/90 (3%)
Query: 23 PNELSGSIDHQTSVQQLPGEPAATEHAEGEHTVGEQPSGEQPSGEHLSGEQPLSELESGE 82
P + G + H ++Q G+P E EG+ E+ G+ E G+ E + G+
Sbjct: 306 PEQQMGQLKH---LEQQEGQPKHLEQQEGQLEQLEEQEGQLKHLEQQEGQLEHLEHQEGQ 362
Query: 83 QPSDEQPSGEHGSGEQPSGEQASGEQPSGE 112
EQ + E+ G+ E+ G+
Sbjct: 363 LGLPEQQVLQLKQLEKQQGQPKHLEEEEGQ 392
>gi|4758216 dishevelled 2 [Homo sapiens]
Length = 736
Score = 37.7 bits (86), Expect = 0.007
Identities = 27/99 (27%), Positives = 38/99 (38%), Gaps = 14/99 (14%)
Query: 32 HQTSVQQLPGEPAATEHAEGEHTVGEQPSGEQPSGEHLSGEQPLSELESGEQPSDEQPSG 91
H+ S G A+++H+EG + G S G +G +P + P
Sbjct: 569 HELSSYTYGGGSASSQHSEGSRSSG---STRSDGGAGRTG-----------RPEERAPES 614
Query: 92 EHGSGEQPSGEQASGEQPSGEHASGEQASGAPISSTSTG 130
+ GSG + G G ASG G P S STG
Sbjct: 615 KSGSGSESEPSSRGGSLRRGGEASGTSDGGPPPSRGSTG 653
>gi|49087132 sal-like 2 [Homo sapiens]
Length = 1007
Score = 37.7 bits (86), Expect = 0.007
Identities = 26/93 (27%), Positives = 41/93 (44%), Gaps = 4/93 (4%)
Query: 41 GEPAATEHAEGEHTVGEQPSGEQPSGEHLSGEQPLSELESGEQPSDEQPSGEH----GSG 96
G AA E+ + TV S Q + S E+ LSE E E +E+ + G G
Sbjct: 728 GGGAAQENGSEQSTVSGAGSFPQQQSQQPSPEEELSEEEEEEDEEEEEDVTDEDSLAGRG 787
Query: 97 EQPSGEQASGEQPSGEHASGEQASGAPISSTST 129
+ GE+A + E ASG + +++ +T
Sbjct: 788 SESGGEKAISVRGDSEEASGAEEEVGTVAAAAT 820
>gi|7657465 podocalyxin-like 2 [Homo sapiens]
Length = 605
Score = 37.7 bits (86), Expect = 0.007
Identities = 31/119 (26%), Positives = 46/119 (38%), Gaps = 10/119 (8%)
Query: 25 ELSGSIDHQTSVQQLPGEPAATEHAEGEHTVGEQPSGEQPSGEHLSGEQPLSELESGEQP 84
E +GSI+ + Q+LP P+ P E+ E E+ E+E E+
Sbjct: 125 EKAGSIEDTSQAQELPNLPSPLPKMNLVEPPWHMPPREEEEEEEEEEEREKEEVEKQEEE 184
Query: 85 SDEQPSGEHGSGEQ----------PSGEQASGEQPSGEHASGEQASGAPISSTSTGTIL 133
+E+ +GS E+ S Q G S SG+QAS +S G L
Sbjct: 185 EEEELLPVNGSQEEAKPQVRDFSLTSSSQTPGATKSRHEDSGDQASSGVEVESSMGPSL 243
>gi|157743257 POU domain, class 6, transcription factor 2 [Homo
sapiens]
Length = 691
Score = 37.7 bits (86), Expect = 0.007
Identities = 29/138 (21%), Positives = 49/138 (35%), Gaps = 8/138 (5%)
Query: 5 LLLMSLYLLGSARGTSSQPNELSGSIDHQTSVQQLPGEPAATEHAEGEHTVGEQPSGE-- 62
++ + L L + +SQ +L + Q QQ P+ +H + Q +
Sbjct: 161 IMTLPLQNLQATSSLNSQLQQLQLQLQQQQQQQQQQPPPSTNQHPQPAPQAPSQSQQQPL 220
Query: 63 ------QPSGEHLSGEQPLSELESGEQPSDEQPSGEHGSGEQPSGEQASGEQPSGEHASG 116
QP P S+L+ QP QP + QPS Q S P S
Sbjct: 221 QPTPPQQPPPASQQPPAPTSQLQQAPQPQQHQPHSHSQNQNQPSPTQQSSSPPQKPSQSP 280
Query: 117 EQASGAPISSTSTGTILN 134
+P++ + ++N
Sbjct: 281 GHGLPSPLTPPNPLQLVN 298
>gi|5031995 prostate stem cell antigen preproprotein [Homo sapiens]
Length = 123
Score = 37.4 bits (85), Expect = 0.009
Identities = 24/79 (30%), Positives = 34/79 (43%), Gaps = 3/79 (3%)
Query: 130 GTILNCYTCAYMNDQGKCLRGEGTCITQNSQQCMLKKIFEGGKLQFMVQGCENMCPSMNL 189
GT L CY+C CL+ E TQ +QC +I G L + +GC C +
Sbjct: 18 GTALLCYSCKAQVSNEDCLQVENC--TQLGEQCWTARIRAVGLLTVISKGCSLNCVDDSQ 75
Query: 190 FSHGTRMQIICCRNQSFCN 208
+ + I CC + CN
Sbjct: 76 DYYVGKKNITCC-DTDLCN 93
>gi|126723060 zinc finger CCCH-type containing 4 [Homo sapiens]
Length = 1303
Score = 37.4 bits (85), Expect = 0.009
Identities = 28/87 (32%), Positives = 36/87 (41%), Gaps = 8/87 (9%)
Query: 38 QLPGEPAATEHAEGEHTVGEQPSGEQPSGEHLSGEQPLSELESGEQPSDEQPSGEHGSGE 97
+L +P T H E G SG PS L+ P S+ E S PS GSG
Sbjct: 863 RLSRDPRLTRHVEASGGSGPGDSG--PSDPRLARALPTSKPEGSLHSSPVGPSSSKGSGP 920
Query: 98 QPSGEQASGEQPSGEHASGEQASGAPI 124
P+ E+ GE A E+A P+
Sbjct: 921 PPT------EEEEGERALREKAVNIPL 941
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.310 0.127 0.376
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,686,102
Number of Sequences: 37866
Number of extensions: 561548
Number of successful extensions: 4476
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 124
Number of HSP's successfully gapped in prelim test: 324
Number of HSP's that attempted gapping in prelim test: 3092
Number of HSP's gapped (non-prelim): 1186
length of query: 210
length of database: 18,247,518
effective HSP length: 98
effective length of query: 112
effective length of database: 14,536,650
effective search space: 1628104800
effective search space used: 1628104800
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.