Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 94536850
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|94536850 spermatogenesis-associated protein 7 isoform b
[Homo sapiens]
(567 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|94536850 spermatogenesis-associated protein 7 isoform b [Homo... 1127 0.0
gi|94536848 spermatogenesis-associated protein 7 isoform a [Homo... 1110 0.0
gi|221316624 dystonin isoform 4 [Homo sapiens] 42 0.001
gi|221316622 dystonin isoform 3 [Homo sapiens] 42 0.001
gi|221316618 dystonin isoform 2 [Homo sapiens] 42 0.001
gi|34577047 dystonin isoform 1 [Homo sapiens] 42 0.001
gi|34577049 dystonin isoform 1eA precursor [Homo sapiens] 42 0.001
gi|20357504 dystonin isoform 1eB precursor [Homo sapiens] 40 0.004
gi|4502443 dystonin isoform 1e precursor [Homo sapiens] 40 0.007
gi|50658065 SMC4 structural maintenance of chromosomes 4-like 1 ... 37 0.037
gi|50658063 SMC4 structural maintenance of chromosomes 4-like 1 ... 37 0.037
gi|38045898 RAB6-interacting protein 2 isoform epsilon [Homo sap... 36 0.11
gi|38045896 RAB6-interacting protein 2 isoform delta [Homo sapiens] 36 0.11
gi|115511012 coiled-coil domain containing 136 [Homo sapiens] 34 0.31
gi|62241003 cardiomyopathy associated 5 [Homo sapiens] 34 0.41
gi|229892308 shugoshin-like 2 isoform 2 [Homo sapiens] 33 0.70
gi|229892306 shugoshin-like 2 isoform 1 [Homo sapiens] 33 0.70
gi|229892197 shugoshin-like 2 isoform 3 [Homo sapiens] 33 0.70
gi|42415492 chromosome 14 open reading frame 106 [Homo sapiens] 33 0.70
gi|210032790 hypothetical protein LOC27146 [Homo sapiens] 33 0.70
gi|153946403 BCL2/adenovirus E1B 19kD interacting protein 1 isof... 33 0.70
gi|50811873 suppressor of hairy wing homolog 4 isoform 2 [Homo s... 33 0.70
gi|50811871 suppressor of hairy wing homolog 4 isoform 1 [Homo s... 33 0.70
gi|40255180 coiled-coil domain containing 83 [Homo sapiens] 33 0.70
gi|115529449 upstream binding transcription factor, RNA polymera... 33 0.91
gi|115529451 upstream binding transcription factor, RNA polymera... 33 0.91
gi|7657671 upstream binding transcription factor, RNA polymerase... 33 0.91
gi|8923720 zinc finger, C4H2 domain containing [Homo sapiens] 33 0.91
gi|58761548 tau tubulin kinase 1 [Homo sapiens] 32 1.2
gi|50083279 centrosome protein 4 [Homo sapiens] 32 1.2
>gi|94536850 spermatogenesis-associated protein 7 isoform b [Homo
sapiens]
Length = 567
Score = 1127 bits (2914), Expect = 0.0
Identities = 567/567 (100%), Positives = 567/567 (100%)
Query: 1 MDGSRRVRATSVLPRYGPPCLFKGHLSTKSNAAVDCSVPVSVSTSIKYADQQRREKLKKE 60
MDGSRRVRATSVLPRYGPPCLFKGHLSTKSNAAVDCSVPVSVSTSIKYADQQRREKLKKE
Sbjct: 1 MDGSRRVRATSVLPRYGPPCLFKGHLSTKSNAAVDCSVPVSVSTSIKYADQQRREKLKKE 60
Query: 61 LAQCEKEFKLTKTAMRANYKNNSKSLFNTLQKPSGEPQIEDDMLKEEMNGFSSFARSLVP 120
LAQCEKEFKLTKTAMRANYKNNSKSLFNTLQKPSGEPQIEDDMLKEEMNGFSSFARSLVP
Sbjct: 61 LAQCEKEFKLTKTAMRANYKNNSKSLFNTLQKPSGEPQIEDDMLKEEMNGFSSFARSLVP 120
Query: 121 SSERLHLSLHKSSKVITNGPEKNSSSSPSSVDYAASGPRKLSSGALYGRRPRSTFPNSHR 180
SSERLHLSLHKSSKVITNGPEKNSSSSPSSVDYAASGPRKLSSGALYGRRPRSTFPNSHR
Sbjct: 121 SSERLHLSLHKSSKVITNGPEKNSSSSPSSVDYAASGPRKLSSGALYGRRPRSTFPNSHR 180
Query: 181 FQLVISKAPSGDLLDKHSELFSNKQLPFTPRTLKTEAKSFLSQYRYYTPAKRKKDFTDQR 240
FQLVISKAPSGDLLDKHSELFSNKQLPFTPRTLKTEAKSFLSQYRYYTPAKRKKDFTDQR
Sbjct: 181 FQLVISKAPSGDLLDKHSELFSNKQLPFTPRTLKTEAKSFLSQYRYYTPAKRKKDFTDQR 240
Query: 241 IEAETQTELSFKSELGTAETKNMTDSEMNIKQASNCVTYDAKEKIAPLPLEGHDSTWDEI 300
IEAETQTELSFKSELGTAETKNMTDSEMNIKQASNCVTYDAKEKIAPLPLEGHDSTWDEI
Sbjct: 241 IEAETQTELSFKSELGTAETKNMTDSEMNIKQASNCVTYDAKEKIAPLPLEGHDSTWDEI 300
Query: 301 KDDALQHSSPRAMCQYSLKPPSTRKIYSDEEELLYLSFIEDVTDEILKLGLFSNRFLERL 360
KDDALQHSSPRAMCQYSLKPPSTRKIYSDEEELLYLSFIEDVTDEILKLGLFSNRFLERL
Sbjct: 301 KDDALQHSSPRAMCQYSLKPPSTRKIYSDEEELLYLSFIEDVTDEILKLGLFSNRFLERL 360
Query: 361 FERHIKQNKHLEEEKMRHLLHVLKVDLGCTSEENSVKQNDVDMLNVFDFEKAGNSEPNEL 420
FERHIKQNKHLEEEKMRHLLHVLKVDLGCTSEENSVKQNDVDMLNVFDFEKAGNSEPNEL
Sbjct: 361 FERHIKQNKHLEEEKMRHLLHVLKVDLGCTSEENSVKQNDVDMLNVFDFEKAGNSEPNEL 420
Query: 421 KNESEVTIQQERQQYQKALDMLLSAPKDENEIFPSPTEFFMPIYKSKHSEGVIIQQVNDE 480
KNESEVTIQQERQQYQKALDMLLSAPKDENEIFPSPTEFFMPIYKSKHSEGVIIQQVNDE
Sbjct: 421 KNESEVTIQQERQQYQKALDMLLSAPKDENEIFPSPTEFFMPIYKSKHSEGVIIQQVNDE 480
Query: 481 TNLETSTLDENHPSISDSLTDRETSVNVIEGDSDPEKVEISNGLCGLNTSPSQSVQFSSV 540
TNLETSTLDENHPSISDSLTDRETSVNVIEGDSDPEKVEISNGLCGLNTSPSQSVQFSSV
Sbjct: 481 TNLETSTLDENHPSISDSLTDRETSVNVIEGDSDPEKVEISNGLCGLNTSPSQSVQFSSV 540
Query: 541 KGDNNHDMELSTLKIMEMSIEDCPLDV 567
KGDNNHDMELSTLKIMEMSIEDCPLDV
Sbjct: 541 KGDNNHDMELSTLKIMEMSIEDCPLDV 567
>gi|94536848 spermatogenesis-associated protein 7 isoform a [Homo
sapiens]
Length = 599
Score = 1110 bits (2871), Expect = 0.0
Identities = 567/599 (94%), Positives = 567/599 (94%), Gaps = 32/599 (5%)
Query: 1 MDGSRRVRATSVLPRYGPPCLFKGHLSTKSNA---------------------------- 32
MDGSRRVRATSVLPRYGPPCLFKGHLSTKSNA
Sbjct: 1 MDGSRRVRATSVLPRYGPPCLFKGHLSTKSNAFCTDSSSLRLSTLQLVKNHMAVHYNKIL 60
Query: 33 ----AVDCSVPVSVSTSIKYADQQRREKLKKELAQCEKEFKLTKTAMRANYKNNSKSLFN 88
AVDCSVPVSVSTSIKYADQQRREKLKKELAQCEKEFKLTKTAMRANYKNNSKSLFN
Sbjct: 61 SAKAAVDCSVPVSVSTSIKYADQQRREKLKKELAQCEKEFKLTKTAMRANYKNNSKSLFN 120
Query: 89 TLQKPSGEPQIEDDMLKEEMNGFSSFARSLVPSSERLHLSLHKSSKVITNGPEKNSSSSP 148
TLQKPSGEPQIEDDMLKEEMNGFSSFARSLVPSSERLHLSLHKSSKVITNGPEKNSSSSP
Sbjct: 121 TLQKPSGEPQIEDDMLKEEMNGFSSFARSLVPSSERLHLSLHKSSKVITNGPEKNSSSSP 180
Query: 149 SSVDYAASGPRKLSSGALYGRRPRSTFPNSHRFQLVISKAPSGDLLDKHSELFSNKQLPF 208
SSVDYAASGPRKLSSGALYGRRPRSTFPNSHRFQLVISKAPSGDLLDKHSELFSNKQLPF
Sbjct: 181 SSVDYAASGPRKLSSGALYGRRPRSTFPNSHRFQLVISKAPSGDLLDKHSELFSNKQLPF 240
Query: 209 TPRTLKTEAKSFLSQYRYYTPAKRKKDFTDQRIEAETQTELSFKSELGTAETKNMTDSEM 268
TPRTLKTEAKSFLSQYRYYTPAKRKKDFTDQRIEAETQTELSFKSELGTAETKNMTDSEM
Sbjct: 241 TPRTLKTEAKSFLSQYRYYTPAKRKKDFTDQRIEAETQTELSFKSELGTAETKNMTDSEM 300
Query: 269 NIKQASNCVTYDAKEKIAPLPLEGHDSTWDEIKDDALQHSSPRAMCQYSLKPPSTRKIYS 328
NIKQASNCVTYDAKEKIAPLPLEGHDSTWDEIKDDALQHSSPRAMCQYSLKPPSTRKIYS
Sbjct: 301 NIKQASNCVTYDAKEKIAPLPLEGHDSTWDEIKDDALQHSSPRAMCQYSLKPPSTRKIYS 360
Query: 329 DEEELLYLSFIEDVTDEILKLGLFSNRFLERLFERHIKQNKHLEEEKMRHLLHVLKVDLG 388
DEEELLYLSFIEDVTDEILKLGLFSNRFLERLFERHIKQNKHLEEEKMRHLLHVLKVDLG
Sbjct: 361 DEEELLYLSFIEDVTDEILKLGLFSNRFLERLFERHIKQNKHLEEEKMRHLLHVLKVDLG 420
Query: 389 CTSEENSVKQNDVDMLNVFDFEKAGNSEPNELKNESEVTIQQERQQYQKALDMLLSAPKD 448
CTSEENSVKQNDVDMLNVFDFEKAGNSEPNELKNESEVTIQQERQQYQKALDMLLSAPKD
Sbjct: 421 CTSEENSVKQNDVDMLNVFDFEKAGNSEPNELKNESEVTIQQERQQYQKALDMLLSAPKD 480
Query: 449 ENEIFPSPTEFFMPIYKSKHSEGVIIQQVNDETNLETSTLDENHPSISDSLTDRETSVNV 508
ENEIFPSPTEFFMPIYKSKHSEGVIIQQVNDETNLETSTLDENHPSISDSLTDRETSVNV
Sbjct: 481 ENEIFPSPTEFFMPIYKSKHSEGVIIQQVNDETNLETSTLDENHPSISDSLTDRETSVNV 540
Query: 509 IEGDSDPEKVEISNGLCGLNTSPSQSVQFSSVKGDNNHDMELSTLKIMEMSIEDCPLDV 567
IEGDSDPEKVEISNGLCGLNTSPSQSVQFSSVKGDNNHDMELSTLKIMEMSIEDCPLDV
Sbjct: 541 IEGDSDPEKVEISNGLCGLNTSPSQSVQFSSVKGDNNHDMELSTLKIMEMSIEDCPLDV 599
>gi|221316624 dystonin isoform 4 [Homo sapiens]
Length = 5526
Score = 42.4 bits (98), Expect = 0.001
Identities = 74/304 (24%), Positives = 126/304 (41%), Gaps = 54/304 (17%)
Query: 237 TDQRIEAETQTELSFKSELGTAETKNMTDSEMNIKQASNCVTYDAKEKIAPLPLEGHDST 296
T QR E Q E S K+ + M SE+ +KQ+ D +K A E + +T
Sbjct: 1340 TTQRKIQENQPENS-KTLATQLNQQKMLVSEIEMKQSK----MDECQKYA----EQYSAT 1390
Query: 297 WDEIKDDALQHSSPRAMCQYSLKPPSTRKIYSDEEELLYLSFIEDVTDEILKLGLFSN-- 354
+KD LQ + RAM K P R+ +L+ F++ T + L +
Sbjct: 1391 ---VKDYELQTMTYRAMVDSQQKSPVKRRRMQSSADLIIQEFMDLRTRYTALVTLMTQYI 1447
Query: 355 RFLERLFERHIKQNKHLEEEKMRHLLHVLKVDLGCTSEENSVKQNDVDMLNVFDFEKAGN 414
+F +R ++ K LEEEK H+ ++ ++ ++K D EKAG
Sbjct: 1448 KFAGDSLKRLEEEEKSLEEEKKEHVEKAKELQKWVSNISKTLK----------DAEKAGK 1497
Query: 415 SEPNELKNESEVTIQQERQQYQKALDMLLSAPKDENEIFPSPTEFFMPIYKSKHSEGVII 474
++ K SE I +++Q +AL + ++ +KH + +
Sbjct: 1498 PPFSKQKISSE-EISTKKEQLSEALQTI-------------------QLFLAKHGDKMTD 1537
Query: 475 QQVNDETNLETSTLDENHPSI-SDS---LTDRETSVNV-----IEGDSDPEKVEISNGLC 525
++ N E + TL E++ + S+S L + +TS +V I + E E G+C
Sbjct: 1538 EERN-ELEKQVKTLQESYNLLFSESLKQLQESQTSGDVKVEEKIVAERQQEYKEKLQGIC 1596
Query: 526 GLNT 529
L T
Sbjct: 1597 DLLT 1600
>gi|221316622 dystonin isoform 3 [Homo sapiens]
Length = 5537
Score = 42.4 bits (98), Expect = 0.001
Identities = 74/304 (24%), Positives = 126/304 (41%), Gaps = 54/304 (17%)
Query: 237 TDQRIEAETQTELSFKSELGTAETKNMTDSEMNIKQASNCVTYDAKEKIAPLPLEGHDST 296
T QR E Q E S K+ + M SE+ +KQ+ D +K A E + +T
Sbjct: 1351 TTQRKIQENQPENS-KTLATQLNQQKMLVSEIEMKQSK----MDECQKYA----EQYSAT 1401
Query: 297 WDEIKDDALQHSSPRAMCQYSLKPPSTRKIYSDEEELLYLSFIEDVTDEILKLGLFSN-- 354
+KD LQ + RAM K P R+ +L+ F++ T + L +
Sbjct: 1402 ---VKDYELQTMTYRAMVDSQQKSPVKRRRMQSSADLIIQEFMDLRTRYTALVTLMTQYI 1458
Query: 355 RFLERLFERHIKQNKHLEEEKMRHLLHVLKVDLGCTSEENSVKQNDVDMLNVFDFEKAGN 414
+F +R ++ K LEEEK H+ ++ ++ ++K D EKAG
Sbjct: 1459 KFAGDSLKRLEEEEKSLEEEKKEHVEKAKELQKWVSNISKTLK----------DAEKAGK 1508
Query: 415 SEPNELKNESEVTIQQERQQYQKALDMLLSAPKDENEIFPSPTEFFMPIYKSKHSEGVII 474
++ K SE I +++Q +AL + ++ +KH + +
Sbjct: 1509 PPFSKQKISSE-EISTKKEQLSEALQTI-------------------QLFLAKHGDKMTD 1548
Query: 475 QQVNDETNLETSTLDENHPSI-SDS---LTDRETSVNV-----IEGDSDPEKVEISNGLC 525
++ N E + TL E++ + S+S L + +TS +V I + E E G+C
Sbjct: 1549 EERN-ELEKQVKTLQESYNLLFSESLKQLQESQTSGDVKVEEKIVAERQQEYKEKLQGIC 1607
Query: 526 GLNT 529
L T
Sbjct: 1608 DLLT 1611
>gi|221316618 dystonin isoform 2 [Homo sapiens]
Length = 5675
Score = 42.4 bits (98), Expect = 0.001
Identities = 74/304 (24%), Positives = 126/304 (41%), Gaps = 54/304 (17%)
Query: 237 TDQRIEAETQTELSFKSELGTAETKNMTDSEMNIKQASNCVTYDAKEKIAPLPLEGHDST 296
T QR E Q E S K+ + M SE+ +KQ+ D +K A E + +T
Sbjct: 1489 TTQRKIQENQPENS-KTLATQLNQQKMLVSEIEMKQSK----MDECQKYA----EQYSAT 1539
Query: 297 WDEIKDDALQHSSPRAMCQYSLKPPSTRKIYSDEEELLYLSFIEDVTDEILKLGLFSN-- 354
+KD LQ + RAM K P R+ +L+ F++ T + L +
Sbjct: 1540 ---VKDYELQTMTYRAMVDSQQKSPVKRRRMQSSADLIIQEFMDLRTRYTALVTLMTQYI 1596
Query: 355 RFLERLFERHIKQNKHLEEEKMRHLLHVLKVDLGCTSEENSVKQNDVDMLNVFDFEKAGN 414
+F +R ++ K LEEEK H+ ++ ++ ++K D EKAG
Sbjct: 1597 KFAGDSLKRLEEEEKSLEEEKKEHVEKAKELQKWVSNISKTLK----------DAEKAGK 1646
Query: 415 SEPNELKNESEVTIQQERQQYQKALDMLLSAPKDENEIFPSPTEFFMPIYKSKHSEGVII 474
++ K SE I +++Q +AL + ++ +KH + +
Sbjct: 1647 PPFSKQKISSE-EISTKKEQLSEALQTI-------------------QLFLAKHGDKMTD 1686
Query: 475 QQVNDETNLETSTLDENHPSI-SDS---LTDRETSVNV-----IEGDSDPEKVEISNGLC 525
++ N E + TL E++ + S+S L + +TS +V I + E E G+C
Sbjct: 1687 EERN-ELEKQVKTLQESYNLLFSESLKQLQESQTSGDVKVEEKIVAERQQEYKEKLQGIC 1745
Query: 526 GLNT 529
L T
Sbjct: 1746 DLLT 1749
>gi|34577047 dystonin isoform 1 [Homo sapiens]
Length = 5497
Score = 42.4 bits (98), Expect = 0.001
Identities = 74/304 (24%), Positives = 126/304 (41%), Gaps = 54/304 (17%)
Query: 237 TDQRIEAETQTELSFKSELGTAETKNMTDSEMNIKQASNCVTYDAKEKIAPLPLEGHDST 296
T QR E Q E S K+ + M SE+ +KQ+ D +K A E + +T
Sbjct: 1311 TTQRKIQENQPENS-KTLATQLNQQKMLVSEIEMKQSK----MDECQKYA----EQYSAT 1361
Query: 297 WDEIKDDALQHSSPRAMCQYSLKPPSTRKIYSDEEELLYLSFIEDVTDEILKLGLFSN-- 354
+KD LQ + RAM K P R+ +L+ F++ T + L +
Sbjct: 1362 ---VKDYELQTMTYRAMVDSQQKSPVKRRRMQSSADLIIQEFMDLRTRYTALVTLMTQYI 1418
Query: 355 RFLERLFERHIKQNKHLEEEKMRHLLHVLKVDLGCTSEENSVKQNDVDMLNVFDFEKAGN 414
+F +R ++ K LEEEK H+ ++ ++ ++K D EKAG
Sbjct: 1419 KFAGDSLKRLEEEEKSLEEEKKEHVEKAKELQKWVSNISKTLK----------DAEKAGK 1468
Query: 415 SEPNELKNESEVTIQQERQQYQKALDMLLSAPKDENEIFPSPTEFFMPIYKSKHSEGVII 474
++ K SE I +++Q +AL + ++ +KH + +
Sbjct: 1469 PPFSKQKISSE-EISTKKEQLSEALQTI-------------------QLFLAKHGDKMTD 1508
Query: 475 QQVNDETNLETSTLDENHPSI-SDS---LTDRETSVNV-----IEGDSDPEKVEISNGLC 525
++ N E + TL E++ + S+S L + +TS +V I + E E G+C
Sbjct: 1509 EERN-ELEKQVKTLQESYNLLFSESLKQLQESQTSGDVKVEEKIVAERQQEYKEKLQGIC 1567
Query: 526 GLNT 529
L T
Sbjct: 1568 DLLT 1571
>gi|34577049 dystonin isoform 1eA precursor [Homo sapiens]
Length = 5171
Score = 42.4 bits (98), Expect = 0.001
Identities = 74/304 (24%), Positives = 126/304 (41%), Gaps = 54/304 (17%)
Query: 237 TDQRIEAETQTELSFKSELGTAETKNMTDSEMNIKQASNCVTYDAKEKIAPLPLEGHDST 296
T QR E Q E S K+ + M SE+ +KQ+ D +K A E + +T
Sbjct: 985 TTQRKIQENQPENS-KTLATQLNQQKMLVSEIEMKQSK----MDECQKYA----EQYSAT 1035
Query: 297 WDEIKDDALQHSSPRAMCQYSLKPPSTRKIYSDEEELLYLSFIEDVTDEILKLGLFSN-- 354
+KD LQ + RAM K P R+ +L+ F++ T + L +
Sbjct: 1036 ---VKDYELQTMTYRAMVDSQQKSPVKRRRMQSSADLIIQEFMDLRTRYTALVTLMTQYI 1092
Query: 355 RFLERLFERHIKQNKHLEEEKMRHLLHVLKVDLGCTSEENSVKQNDVDMLNVFDFEKAGN 414
+F +R ++ K LEEEK H+ ++ ++ ++K D EKAG
Sbjct: 1093 KFAGDSLKRLEEEEKSLEEEKKEHVEKAKELQKWVSNISKTLK----------DAEKAGK 1142
Query: 415 SEPNELKNESEVTIQQERQQYQKALDMLLSAPKDENEIFPSPTEFFMPIYKSKHSEGVII 474
++ K SE I +++Q +AL + ++ +KH + +
Sbjct: 1143 PPFSKQKISSE-EISTKKEQLSEALQTI-------------------QLFLAKHGDKMTD 1182
Query: 475 QQVNDETNLETSTLDENHPSI-SDS---LTDRETSVNV-----IEGDSDPEKVEISNGLC 525
++ N E + TL E++ + S+S L + +TS +V I + E E G+C
Sbjct: 1183 EERN-ELEKQVKTLQESYNLLFSESLKQLQESQTSGDVKVEEKIVAERQQEYKEKLQGIC 1241
Query: 526 GLNT 529
L T
Sbjct: 1242 DLLT 1245
>gi|20357504 dystonin isoform 1eB precursor [Homo sapiens]
Length = 3062
Score = 40.4 bits (93), Expect = 0.004
Identities = 73/325 (22%), Positives = 133/325 (40%), Gaps = 46/325 (14%)
Query: 237 TDQRIEAETQTELSFKSELGTAETKNMTDSEMNIKQASNCVTYDAKEKIAPLPLEGHDST 296
T QR E Q E S K+ + M SE+ +KQ+ D +K A E + +T
Sbjct: 985 TTQRKIQENQPENS-KTLATQLNQQKMLVSEIEMKQSK----MDECQKYA----EQYSAT 1035
Query: 297 WDEIKDDALQHSSPRAMCQYSLKPPSTRKIYSDEEELLYLSFIEDVTDEILKLGLFSN-- 354
+KD LQ + RAM K P R+ +L+ F++ T + L +
Sbjct: 1036 ---VKDYELQTMTYRAMVDSQQKSPVKRRRMQSSADLIIQEFMDLRTRYTALVTLMTQYI 1092
Query: 355 RFLERLFERHIKQNKHLEEEKMRHLLHVLKVDLGCTSEENSVKQNDVDMLNVFDFEKAGN 414
+F +R ++ K LEEEK H+ ++ ++ ++K D EKAG
Sbjct: 1093 KFAGDSLKRLEEEEKSLEEEKKEHVEKAKELQKWVSNISKTLK----------DAEKAGK 1142
Query: 415 SEPNELKNESEVTIQQERQQYQKALDMLLSAPKDENEIFPSPTEFFMPIYKSKHSEGVII 474
++ K SE I +++Q +AL + ++ +KH + +
Sbjct: 1143 PPFSKQKISSE-EISTKKEQLSEALQTI-------------------QLFLAKHGDKMTD 1182
Query: 475 QQVNDETNLETSTLDENHPSI-SDSLTDRETSVNVIEGDSDPEKVEISNGLCGLNTSPSQ 533
++ N E + TL E++ + S+SL + S + + + ++ G T
Sbjct: 1183 EERN-ELEKQVKTLQESYNLLFSESLKQLQESQTSGDVKVEEKLDKVIAGTIDQTTGEVL 1241
Query: 534 SVQFSSVKGDNNHDMELSTLKIMEM 558
SV + ++G ++D + L+ M
Sbjct: 1242 SVFQAVLRGLIDYDTGIRLLETQLM 1266
>gi|4502443 dystonin isoform 1e precursor [Homo sapiens]
Length = 2649
Score = 39.7 bits (91), Expect = 0.007
Identities = 76/335 (22%), Positives = 135/335 (40%), Gaps = 32/335 (9%)
Query: 237 TDQRIEAETQTELSFKSELGTAETKNMTDSEMNIKQASNCVTYDAKEKIAPLPLEGHDST 296
T QR E Q E S K+ + M SE+ +KQ+ D +K A E + +T
Sbjct: 985 TTQRKIQENQPENS-KTLATQLNQQKMLVSEIEMKQSK----MDECQKYA----EQYSAT 1035
Query: 297 WDEIKDDALQHSSPRAMCQYSLKPPSTRKIYSDEEELLYLSFIEDVTDEILKLGL----- 351
+KD LQ + RAM K P R+ +L+ F++ T + L
Sbjct: 1036 ---VKDYELQTMTYRAMVDSQQKSPVKRRRMQSSADLIIQEFMDLRTRYTALVTLMTQYI 1092
Query: 352 -FSNRFLERLFERHIKQNKHLEEE-KMRHLLHVLKVDLGCTSEENSVKQNDVDMLN--VF 407
F+ L+RL E IK+ K E LL K T ENS + L V
Sbjct: 1093 KFAGDSLKRLEEEEIKRCKETSEHGAYSDLLQRQK----ATVLENSKLTGKISELERMVA 1148
Query: 408 DFEKAGNSEPNELKNESEVTIQQERQQYQKALDMLLSAPKDENEIFPSPTEFFMPIYKSK 467
+ +K + EL E + R+Q + D+ L + E+E E + + +
Sbjct: 1149 ELKKQKSRVEEELPKVREAAENELRKQQRNVEDISLQKIRAESEAKQYRRELETIVREKE 1208
Query: 468 HSEGVI--IQQVNDETNLETSTLDENHPSISDSLTDRETSVNVIEGDSDPEKVEISNGLC 525
+E + ++Q+ E + + ++EN + + L + + +E + + +++
Sbjct: 1209 AAERELERVRQLTIEAEAKRAAVEENLLNFRNQLEENTFTRRTLEDHLKRKDLSLND--- 1265
Query: 526 GLNTSPSQSVQFSSVKGDNNHDMELSTLKIMEMSI 560
L ++ ++ K DN ++ L +K ME +
Sbjct: 1266 -LEQQKNKLMEELRRKRDNEEEL-LKLIKQMEKDL 1298
>gi|50658065 SMC4 structural maintenance of chromosomes 4-like 1
[Homo sapiens]
Length = 1288
Score = 37.4 bits (85), Expect = 0.037
Identities = 36/142 (25%), Positives = 56/142 (39%), Gaps = 6/142 (4%)
Query: 392 EENSVKQNDVDMLNVFDFEKAGNSEPNELKNESEVTIQQERQQYQKALDMLLSAPKDENE 451
EEN K +D+ +V EK ++ K E ++ +E+ + K++ P N
Sbjct: 384 EENKEKFTQLDLEDVQVREKLKHATSKAKKLEKQLQKDKEKVEEFKSI------PAKSNN 437
Query: 452 IFPSPTEFFMPIYKSKHSEGVIIQQVNDETNLETSTLDENHPSISDSLTDRETSVNVIEG 511
I T + K K E +++V D ET L + S L SVN
Sbjct: 438 IINETTTRNNALEKEKEKEEKKLKEVMDSLKQETQGLQKEKESREKELMGFSKSVNEARS 497
Query: 512 DSDPEKVEISNGLCGLNTSPSQ 533
D + E+ L NT+ SQ
Sbjct: 498 KMDVAQSELDIYLSRHNTAVSQ 519
>gi|50658063 SMC4 structural maintenance of chromosomes 4-like 1
[Homo sapiens]
Length = 1288
Score = 37.4 bits (85), Expect = 0.037
Identities = 36/142 (25%), Positives = 56/142 (39%), Gaps = 6/142 (4%)
Query: 392 EENSVKQNDVDMLNVFDFEKAGNSEPNELKNESEVTIQQERQQYQKALDMLLSAPKDENE 451
EEN K +D+ +V EK ++ K E ++ +E+ + K++ P N
Sbjct: 384 EENKEKFTQLDLEDVQVREKLKHATSKAKKLEKQLQKDKEKVEEFKSI------PAKSNN 437
Query: 452 IFPSPTEFFMPIYKSKHSEGVIIQQVNDETNLETSTLDENHPSISDSLTDRETSVNVIEG 511
I T + K K E +++V D ET L + S L SVN
Sbjct: 438 IINETTTRNNALEKEKEKEEKKLKEVMDSLKQETQGLQKEKESREKELMGFSKSVNEARS 497
Query: 512 DSDPEKVEISNGLCGLNTSPSQ 533
D + E+ L NT+ SQ
Sbjct: 498 KMDVAQSELDIYLSRHNTAVSQ 519
>gi|38045898 RAB6-interacting protein 2 isoform epsilon [Homo sapiens]
Length = 1116
Score = 35.8 bits (81), Expect = 0.11
Identities = 41/199 (20%), Positives = 80/199 (40%), Gaps = 19/199 (9%)
Query: 298 DEIKDDALQHSSPRAMCQYSLKPPSTRKIYSDEEELLYLSFIEDVTDEI-LKLGLFSNRF 356
+E +++Q ++ R M + T EE L+ + ++ + + KL
Sbjct: 843 EEALRESVQITAEREMVLAQEESARTNAEKQVEELLMAMEKVKQELESMKAKLSSTQQSL 902
Query: 357 LERLFERHIKQNKHLEEEKMRHLLHVLKVDLGCTSEENSVKQNDVDMLNVFDFEKAGNSE 416
E+ E H+ +L E+ +HL VL++ S K ++ +L + +K E
Sbjct: 903 AEK--ETHLT---NLRAERRKHLEEVLEMKQEALLAAISEKDANIALLELSSSKKKTQEE 957
Query: 417 PNELKNESEVTIQQERQQYQKALDMLLSAPKDENEIFPSPTEFFMPIYKSKHSEGVIIQQ 476
LK E + +QQ +QQ Q + ++ +D++ +KS HS +
Sbjct: 958 VAALKREKDRLVQQLKQQTQNRMKLMADNYEDDH-------------FKSSHSNQTNHKP 1004
Query: 477 VNDETNLETSTLDENHPSI 495
D+ LD+N +
Sbjct: 1005 SPDQIIQPLLELDQNRSKL 1023
>gi|38045896 RAB6-interacting protein 2 isoform delta [Homo sapiens]
Length = 1088
Score = 35.8 bits (81), Expect = 0.11
Identities = 41/199 (20%), Positives = 80/199 (40%), Gaps = 19/199 (9%)
Query: 298 DEIKDDALQHSSPRAMCQYSLKPPSTRKIYSDEEELLYLSFIEDVTDEI-LKLGLFSNRF 356
+E +++Q ++ R M + T EE L+ + ++ + + KL
Sbjct: 815 EEALRESVQITAEREMVLAQEESARTNAEKQVEELLMAMEKVKQELESMKAKLSSTQQSL 874
Query: 357 LERLFERHIKQNKHLEEEKMRHLLHVLKVDLGCTSEENSVKQNDVDMLNVFDFEKAGNSE 416
E+ E H+ +L E+ +HL VL++ S K ++ +L + +K E
Sbjct: 875 AEK--ETHLT---NLRAERRKHLEEVLEMKQEALLAAISEKDANIALLELSSSKKKTQEE 929
Query: 417 PNELKNESEVTIQQERQQYQKALDMLLSAPKDENEIFPSPTEFFMPIYKSKHSEGVIIQQ 476
LK E + +QQ +QQ Q + ++ +D++ +KS HS +
Sbjct: 930 VAALKREKDRLVQQLKQQTQNRMKLMADNYEDDH-------------FKSSHSNQTNHKP 976
Query: 477 VNDETNLETSTLDENHPSI 495
D+ LD+N +
Sbjct: 977 SPDQIIQPLLELDQNRSKL 995
>gi|115511012 coiled-coil domain containing 136 [Homo sapiens]
Length = 1154
Score = 34.3 bits (77), Expect = 0.31
Identities = 51/249 (20%), Positives = 96/249 (38%), Gaps = 21/249 (8%)
Query: 53 RREKLKKELAQCEKEFK-----LTKTAMRANYKNNSKSLFNTLQKPSGEPQIEDD----- 102
+++ LK+EL CE+EFK L K N KN K L L++ + Q D
Sbjct: 887 KQKDLKEELDACEREFKECMECLEKPMAPQNDKNEIKELQTKLRELQLQYQASMDEQGRL 946
Query: 103 -MLKEEMNGFSSFARSLVPSSERLHLSLHKSSKVITNGPEKNSSSSPSSVDYAASGPRKL 161
+++E++ G L E L K V+ KN++ +++ A+G +
Sbjct: 947 LVVQEQLEG------QLQCCQEELRQLREKRPSVVKEARGKNAN---KNMNKNANGVKMK 997
Query: 162 SSGALYGRRPRSTFPNSHRFQLVI-SKAPSGDLLDKHSELFSNKQLPFTPRTLKTEAKSF 220
S ++V+ KA L E +++ + +K EAK
Sbjct: 998 KVTKPCSDTSESDLETRKSLEVVLYYKASQRKLDGLAKEEEKKEEMEEEKKQVKEEAKEQ 1057
Query: 221 LSQYRYYTPAKRKKDFTDQRIEAETQTELSFKSELGTAETKNMTDSEMNIKQASNCVTYD 280
PA ++ + + E + + + E + E ++ DS + + +N +
Sbjct: 1058 CGDELVAEPADPEEAKSTEDQEENEEDKEEEEKEEDSEEEEDDADSSLESPEENNPLRLS 1117
Query: 281 AKEKIAPLP 289
+K +P P
Sbjct: 1118 ESKKSSPTP 1126
>gi|62241003 cardiomyopathy associated 5 [Homo sapiens]
Length = 4069
Score = 33.9 bits (76), Expect = 0.41
Identities = 40/182 (21%), Positives = 68/182 (37%), Gaps = 11/182 (6%)
Query: 383 LKVDLGCTSE--ENSVKQNDVDMLNVFDFEKAGNSEPNELKNESE--------VTIQQER 432
L V L C E +S+ Q +L + +SE E ESE +T + +
Sbjct: 2636 LPVALSCRDEIENHSLSQEGNLVLEKSSRDMPDHSEEKEQFRESELSKGGSVDITKETVK 2695
Query: 433 QQYQKALDMLLSAPKDENEIFPSPTEFFMPIYKSKHSEGVIIQQVNDETNLETSTLDENH 492
Q +Q+ P +E+++ T+ F+P+ S H E + ++ E NL +
Sbjct: 2696 QGFQEKAVGTQPRPLEESKVLVEKTKTFLPVVLSCHDE-IENHSLSQEGNLVLEKSSRDM 2754
Query: 493 PSISDSLTDRETSVNVIEGDSDPEKVEISNGLCGLNTSPSQSVQFSSVKGDNNHDMELST 552
P S+ + S G D K + G + + + F K LS
Sbjct: 2755 PDHSEEKEQFKESELWKGGSVDITKESMKEGFPSKESERTLARPFDETKSSETPPYLLSP 2814
Query: 553 LK 554
+K
Sbjct: 2815 VK 2816
>gi|229892308 shugoshin-like 2 isoform 2 [Homo sapiens]
Length = 1260
Score = 33.1 bits (74), Expect = 0.70
Identities = 37/150 (24%), Positives = 61/150 (40%), Gaps = 10/150 (6%)
Query: 390 TSEENSVKQNDVDMLNVFDFEKAGNSEPNELKNESEVTIQQERQQYQKALDMLLSAPKDE 449
TSE +S N V++ +K + N+ I++ Q +K M + K +
Sbjct: 1027 TSEADSDPGNPVELCKT---QKQSTTTLNKKDLPFVEEIKEGECQVKKVNKMTSKSKKRK 1083
Query: 450 NEIFPSPT--EFFMPIYKSKHSEGVIIQQVNDETNLETSTLDENHPSISDSLTDRETSVN 507
I PSP E I S + + +Q + E NLE + +N P D T S++
Sbjct: 1084 TSIDPSPESHEVMERILDSVQGKSTVSEQADKENNLENEKMVKNKP---DFYTKAFRSLS 1140
Query: 508 VIEGDS--DPEKVEISNGLCGLNTSPSQSV 535
I + D + GL L+ S ++V
Sbjct: 1141 EIHSPNIQDSSFDSVREGLVPLSVSSGKNV 1170
>gi|229892306 shugoshin-like 2 isoform 1 [Homo sapiens]
Length = 1265
Score = 33.1 bits (74), Expect = 0.70
Identities = 37/150 (24%), Positives = 61/150 (40%), Gaps = 10/150 (6%)
Query: 390 TSEENSVKQNDVDMLNVFDFEKAGNSEPNELKNESEVTIQQERQQYQKALDMLLSAPKDE 449
TSE +S N V++ +K + N+ I++ Q +K M + K +
Sbjct: 1027 TSEADSDPGNPVELCKT---QKQSTTTLNKKDLPFVEEIKEGECQVKKVNKMTSKSKKRK 1083
Query: 450 NEIFPSPT--EFFMPIYKSKHSEGVIIQQVNDETNLETSTLDENHPSISDSLTDRETSVN 507
I PSP E I S + + +Q + E NLE + +N P D T S++
Sbjct: 1084 TSIDPSPESHEVMERILDSVQGKSTVSEQADKENNLENEKMVKNKP---DFYTKAFRSLS 1140
Query: 508 VIEGDS--DPEKVEISNGLCGLNTSPSQSV 535
I + D + GL L+ S ++V
Sbjct: 1141 EIHSPNIQDSSFDSVREGLVPLSVSSGKNV 1170
>gi|229892197 shugoshin-like 2 isoform 3 [Homo sapiens]
Length = 1261
Score = 33.1 bits (74), Expect = 0.70
Identities = 37/150 (24%), Positives = 61/150 (40%), Gaps = 10/150 (6%)
Query: 390 TSEENSVKQNDVDMLNVFDFEKAGNSEPNELKNESEVTIQQERQQYQKALDMLLSAPKDE 449
TSE +S N V++ +K + N+ I++ Q +K M + K +
Sbjct: 1027 TSEADSDPGNPVELCKT---QKQSTTTLNKKDLPFVEEIKEGECQVKKVNKMTSKSKKRK 1083
Query: 450 NEIFPSPT--EFFMPIYKSKHSEGVIIQQVNDETNLETSTLDENHPSISDSLTDRETSVN 507
I PSP E I S + + +Q + E NLE + +N P D T S++
Sbjct: 1084 TSIDPSPESHEVMERILDSVQGKSTVSEQADKENNLENEKMVKNKP---DFYTKAFRSLS 1140
Query: 508 VIEGDS--DPEKVEISNGLCGLNTSPSQSV 535
I + D + GL L+ S ++V
Sbjct: 1141 EIHSPNIQDSSFDSVREGLVPLSVSSGKNV 1170
>gi|42415492 chromosome 14 open reading frame 106 [Homo sapiens]
Length = 1132
Score = 33.1 bits (74), Expect = 0.70
Identities = 42/227 (18%), Positives = 98/227 (43%), Gaps = 23/227 (10%)
Query: 65 EKEFKLTKTAMRANYKNNSKSLFNTLQKPSGEPQIEDDMLKEEMNGFSSFARSLVPSSER 124
+KE+K++ ++ + N + + + Q+ + E + D+L FS R + +++
Sbjct: 587 KKEYKMSSKKLKIGERTNERIIKSQKQETTEELDVSIDILTSREQFFSDEERKYMAINQK 646
Query: 125 ---LHLSLHKSSKVITNGPEKNSSSS---PSSVDYA-----ASGPRKLSSGAL----YGR 169
+ ++ KS KVI + + S+ + D+ P S G L G
Sbjct: 647 KAYILVTPLKSRKVIEQRCMRYNLSAGTIKAVTDFVIPECQKKSPISKSMGTLENTFEGH 706
Query: 170 RPRSTFPNSHRFQLVISKAPSGDLLDKHSELFSN--KQLPFTPRTLKTEAKSFLSQYRYY 227
+ ++ R L +++ L+K L S+ K P+ K E + +S Y++
Sbjct: 707 KSKNKEDCDERDLLTVNRKIKISNLEKEQMLTSDFKKNTRLLPKLKKIENQVAMSFYKHQ 766
Query: 228 TPAKRKKDFTDQRIEAETQTELSFKSELGTAETKNMTDSEMNIKQAS 274
+ + E+ET+ E+ K+E+ + N ++ +++++++
Sbjct: 767 SSPDLSSE------ESETEKEIKRKAEVKKTKAGNTKEAVVHLRKST 807
>gi|210032790 hypothetical protein LOC27146 [Homo sapiens]
Length = 1060
Score = 33.1 bits (74), Expect = 0.70
Identities = 21/87 (24%), Positives = 48/87 (55%), Gaps = 8/87 (9%)
Query: 356 FLERLFERHIKQNKHLEEEKMRHLLHVLKVDLGCTSEENSVKQNDVDMLNVFDFEKAGNS 415
++++ +E +++ KH EE+ +HL L L E+ VK++ V++ +V + +
Sbjct: 401 YMKQQYEEDLRKIKHQTEEEKKHLKDQLVKRL-----EDLVKKHTVEIKSV---RSSVEA 452
Query: 416 EPNELKNESEVTIQQERQQYQKALDML 442
E +L+ E E +++ R++ +K + L
Sbjct: 453 ERKKLQREVEAQLEEVRKKSEKEIKQL 479
>gi|153946403 BCL2/adenovirus E1B 19kD interacting protein 1 isoform
BNIP1-a [Homo sapiens]
Length = 194
Score = 33.1 bits (74), Expect = 0.70
Identities = 32/119 (26%), Positives = 54/119 (45%), Gaps = 9/119 (7%)
Query: 35 DCSVPVS----VSTSIKYADQQRREKLK--KELAQCEKEFKLTKTAMRANYKNNSKSLFN 88
DCS P+S ++T +K QQ R +++ ++LA+ E++ + K + +N+ K +
Sbjct: 32 DCSGPLSALTELNTKVKEKFQQLRHRIQDLEQLAK-EQDKESEKQLLLQEVENHKKQMLR 90
Query: 89 TLQKPSGEPQIEDDMLKEEMNGFSSFARSLVPSSERLHLSLHKSSKVITNGPEKNSSSS 147
K S + E + G S V SE SL SS+ I + E+ S S
Sbjct: 91 KTTKESLAQ--TSSTITESLMGISRMMAQQVQQSEEAMQSLVTSSRTILDANEEFKSMS 147
>gi|50811873 suppressor of hairy wing homolog 4 isoform 2 [Homo
sapiens]
Length = 966
Score = 33.1 bits (74), Expect = 0.70
Identities = 29/137 (21%), Positives = 57/137 (41%), Gaps = 5/137 (3%)
Query: 25 HLSTKSNAAVDCSVPVSVSTSIKYADQQRREKLKKELAQCEKEFKLTKTAMRANYKNNSK 84
H +TK+ C + ++T + + ++K +C +F K M ++K
Sbjct: 428 HENTKNLLCPFCLKVIKIATPYMHHYMKHQKKGIHRCTKCRLQFLTCKEKM--DHKTQHH 485
Query: 85 SLFNTLQKPSGEPQIEDDMLKEEMNGFSSFAR---SLVPSSERLHLSLHKSSKVITNGPE 141
F ++ G P ++ + S A S+ S+ L LS ++ + P
Sbjct: 486 RTFIKPKQLEGLPPGTKVTIRASVGPLQSGASPTPSISASASTLQLSPPRTKNITAKNPA 545
Query: 142 KNSSSSPSSVDYAASGP 158
K+++S P++V AS P
Sbjct: 546 KSNTSKPNTVKSNASKP 562
>gi|50811871 suppressor of hairy wing homolog 4 isoform 1 [Homo
sapiens]
Length = 979
Score = 33.1 bits (74), Expect = 0.70
Identities = 29/137 (21%), Positives = 57/137 (41%), Gaps = 5/137 (3%)
Query: 25 HLSTKSNAAVDCSVPVSVSTSIKYADQQRREKLKKELAQCEKEFKLTKTAMRANYKNNSK 84
H +TK+ C + ++T + + ++K +C +F K M ++K
Sbjct: 441 HENTKNLLCPFCLKVIKIATPYMHHYMKHQKKGIHRCTKCRLQFLTCKEKM--DHKTQHH 498
Query: 85 SLFNTLQKPSGEPQIEDDMLKEEMNGFSSFAR---SLVPSSERLHLSLHKSSKVITNGPE 141
F ++ G P ++ + S A S+ S+ L LS ++ + P
Sbjct: 499 RTFIKPKQLEGLPPGTKVTIRASVGPLQSGASPTPSISASASTLQLSPPRTKNITAKNPA 558
Query: 142 KNSSSSPSSVDYAASGP 158
K+++S P++V AS P
Sbjct: 559 KSNTSKPNTVKSNASKP 575
>gi|40255180 coiled-coil domain containing 83 [Homo sapiens]
Length = 444
Score = 33.1 bits (74), Expect = 0.70
Identities = 43/194 (22%), Positives = 88/194 (45%), Gaps = 26/194 (13%)
Query: 320 PPSTRKIYSDEEELLYLSFI-EDVTDEILKLGLFSNRFLERLFERHIKQNKHLEEEKMRH 378
PP K+ + E L Y I ED ++ + F + L + +++ ++N L+EE++ H
Sbjct: 16 PPKEIKLPTSEALLDYQCQIKEDAVEQFM----FQIKTLRKKNQKYHERNSRLKEEQIWH 71
Query: 379 LLHVLKVDLGCTSEENSVKQNDVDMLNVFDFEKAGNSEPNELKNESEVTIQQERQQYQKA 438
+ H+LK E + K + ++ D E+A E + + + E ++ R Q A
Sbjct: 72 IRHLLK-------ELSEEKAEGLPVVTREDVEEA-MKEKWKFERDQEKNLRDMRMQISNA 123
Query: 439 LDMLLSAPKDENEIFPSPTEFFMPIYKSKHSEGVIIQQVNDETNLETSTLDENHPSISD- 497
+ L E E + E + + +H++ +I + ++ N T+ EN +S+
Sbjct: 124 -EKLFLEKLSEKEYW----EEYKNVGSERHAK--LITSLQNDIN----TVKENAEKMSEH 172
Query: 498 -SLTDRETSVNVIE 510
+T +T +I+
Sbjct: 173 YKITLEDTRKKIIK 186
>gi|115529449 upstream binding transcription factor, RNA polymerase
I isoform b [Homo sapiens]
Length = 727
Score = 32.7 bits (73), Expect = 0.91
Identities = 26/84 (30%), Positives = 44/84 (52%), Gaps = 15/84 (17%)
Query: 50 DQQRREKLK--KELAQCEKEFKLTKTAMRAN--YKNNSKSLFNTLQKPSGEPQIEDDMLK 105
+ +++EKL K+ A+ +K ++ + MRA N+SK + K GEP+ K
Sbjct: 484 NMEKKEKLMWIKKAAEDQKRYERELSEMRAPPAATNSSKKM-----KFQGEPK------K 532
Query: 106 EEMNGFSSFARSLVPSSERLHLSL 129
MNG+ F++ L+ + E HL L
Sbjct: 533 PPMNGYQKFSQELLSNGELNHLPL 556
>gi|115529451 upstream binding transcription factor, RNA polymerase
I isoform b [Homo sapiens]
Length = 727
Score = 32.7 bits (73), Expect = 0.91
Identities = 26/84 (30%), Positives = 44/84 (52%), Gaps = 15/84 (17%)
Query: 50 DQQRREKLK--KELAQCEKEFKLTKTAMRAN--YKNNSKSLFNTLQKPSGEPQIEDDMLK 105
+ +++EKL K+ A+ +K ++ + MRA N+SK + K GEP+ K
Sbjct: 484 NMEKKEKLMWIKKAAEDQKRYERELSEMRAPPAATNSSKKM-----KFQGEPK------K 532
Query: 106 EEMNGFSSFARSLVPSSERLHLSL 129
MNG+ F++ L+ + E HL L
Sbjct: 533 PPMNGYQKFSQELLSNGELNHLPL 556
>gi|7657671 upstream binding transcription factor, RNA polymerase I
isoform a [Homo sapiens]
Length = 764
Score = 32.7 bits (73), Expect = 0.91
Identities = 26/84 (30%), Positives = 44/84 (52%), Gaps = 15/84 (17%)
Query: 50 DQQRREKLK--KELAQCEKEFKLTKTAMRAN--YKNNSKSLFNTLQKPSGEPQIEDDMLK 105
+ +++EKL K+ A+ +K ++ + MRA N+SK + K GEP+ K
Sbjct: 521 NMEKKEKLMWIKKAAEDQKRYERELSEMRAPPAATNSSKKM-----KFQGEPK------K 569
Query: 106 EEMNGFSSFARSLVPSSERLHLSL 129
MNG+ F++ L+ + E HL L
Sbjct: 570 PPMNGYQKFSQELLSNGELNHLPL 593
>gi|8923720 zinc finger, C4H2 domain containing [Homo sapiens]
Length = 224
Score = 32.7 bits (73), Expect = 0.91
Identities = 25/104 (24%), Positives = 51/104 (49%), Gaps = 10/104 (9%)
Query: 328 SDEEELLY-LSFIEDVTDEILKLGLFSNRFLERLF-----ERHIKQNKH----LEEEKMR 377
+DE+E++ L I+++ ++ L++ R ERH+K+ K L +EKM
Sbjct: 2 ADEQEIMCKLESIKEIRNKTLQMEKIKARLKAEFEALESEERHLKEYKQEMDLLLQEKMA 61
Query: 378 HLLHVLKVDLGCTSEENSVKQNDVDMLNVFDFEKAGNSEPNELK 421
H+ + + EN++KQ++ D+ + + + + E LK
Sbjct: 62 HVEELRLIHADINVMENTIKQSENDLNKLLESTRRLHDEYKPLK 105
>gi|58761548 tau tubulin kinase 1 [Homo sapiens]
Length = 1321
Score = 32.3 bits (72), Expect = 1.2
Identities = 26/113 (23%), Positives = 52/113 (46%), Gaps = 5/113 (4%)
Query: 348 KLGLFSNRFLERLFERHIKQNKHLEEEKMRHLLHVLKVD--LGCTSEENSVKQNDVDMLN 405
++G+ ++ R+ +H+ HL + + L + K D L + ENS+K+ +
Sbjct: 247 QVGMIKEKYEHRMLLKHMPSEFHLFLDHIASLDYFTKPDYQLIMSVFENSMKERGIAENE 306
Query: 406 VFDFEKAGNSEPNELKNESEVTIQQERQQYQKALDMLLSAPKDENEIFPSPTE 458
FD+EKAG + L + S T Q+ + A+ +++ ++ TE
Sbjct: 307 AFDWEKAGT---DALLSTSTSTPPQQNTRQTAAMFGVVNVTPVPGDLLRENTE 356
>gi|50083279 centrosome protein 4 [Homo sapiens]
Length = 1140
Score = 32.3 bits (72), Expect = 1.2
Identities = 55/267 (20%), Positives = 107/267 (40%), Gaps = 36/267 (13%)
Query: 261 KNMTDSEMNIKQASNCVTYDAKEKIAPLPLEGHDSTWDEIKDDALQHSSPRAMC-----Q 315
K M D + N+K + ++K++ L E + ++ ++ Q ++P + +
Sbjct: 517 KYMEDIQSNVKLLTA-----ERDKLSVLYNEAQEEL-SALRKESTQTTAPHNIVSLMEKE 570
Query: 316 YSLKPPSTRKIYSDEEELLYLSFIEDVTDEILKLGLFSNRFLERLFERHIKQNKHLEEEK 375
L R+I +++E L + + I ++ LF LE+ E N LE EK
Sbjct: 571 KELALSDLRRIMAEKEAL------REKLEHIEEVSLFGKSELEKTIEHLTCVNHQLESEK 624
Query: 376 MRHLLHVLKVDLGCTSEENSVKQNDVDMLNVFDFEKAGNSEPNELKNESEVTIQQERQQY 435
VL + S EN +K +V +E N L+ +E +Q+ Y
Sbjct: 625 YELKSKVLIMKETIESLENKLKVQAQKFSHVAGDSSHQKTEVNSLRIVNE-QLQRSVDDY 683
Query: 436 QKALDMLLSAPKDENEIFPSPTEFFMPIYKSKHSEGVIIQQVNDETNLETSTLDENHPSI 495
Q LS + E E S ++ I+++ DE NL+ ++ DE +
Sbjct: 684 QHR----LSIKRGELE--------------SAQAQIKILEEKIDELNLKMTSQDEEAHVM 725
Query: 496 SDSLTDRETSVNVIEGDSDPEKVEISN 522
++ + + ++ D + +I+N
Sbjct: 726 KKTIGVIDKEKDFLQETVDEKTEKIAN 752
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.310 0.127 0.352
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,659,676
Number of Sequences: 37866
Number of extensions: 1000106
Number of successful extensions: 3033
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 68
Number of HSP's that attempted gapping in prelim test: 3000
Number of HSP's gapped (non-prelim): 97
length of query: 567
length of database: 18,247,518
effective HSP length: 108
effective length of query: 459
effective length of database: 14,157,990
effective search space: 6498517410
effective search space used: 6498517410
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.