Search of human proteins with 8923892

Search of human proteins with 8923892

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|8923892 peroxisomal membrane protein 2, 22kDa [Homo sapiens]
         (195 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|8923892 peroxisomal membrane protein 2, 22kDa [Homo sapiens]       394   e-110
gi|4505241 Mpv17 protein [Homo sapiens]                                80   1e-15
gi|116235468 MPV17 mitochondrial membrane protein-like 2 [Homo s...    74   8e-14
gi|190358477 MPV17 mitochondrial membrane protein-like isoform 1...    57   1e-08
gi|38348340 diacylglycerol O-acyltransferase 2-like 6 [Homo sapi...    27   8.4  

>gi|8923892 peroxisomal membrane protein 2, 22kDa [Homo sapiens]
          Length = 195

 Score =  394 bits (1013), Expect = e-110
 Identities = 195/195 (100%), Positives = 195/195 (100%)

Query: 1   MAPAASRLRAEAGLGALPRRALAQYLLFLRLYPVLTKAATSGILSALGNFLAQMIEKKRK 60
           MAPAASRLRAEAGLGALPRRALAQYLLFLRLYPVLTKAATSGILSALGNFLAQMIEKKRK
Sbjct: 1   MAPAASRLRAEAGLGALPRRALAQYLLFLRLYPVLTKAATSGILSALGNFLAQMIEKKRK 60

Query: 61  KENSRSLDVGGPLRYAVYGFFFTGPLSHFFYFFMEHWIPPEVPLAGLRRLLLDRLVFAPA 120
           KENSRSLDVGGPLRYAVYGFFFTGPLSHFFYFFMEHWIPPEVPLAGLRRLLLDRLVFAPA
Sbjct: 61  KENSRSLDVGGPLRYAVYGFFFTGPLSHFFYFFMEHWIPPEVPLAGLRRLLLDRLVFAPA 120

Query: 121 FLMLFFLIMNFLEGKDASAFAAKMRGGFWPALRMNWRVWTPLQFININYVPLKFRVLFAN 180
           FLMLFFLIMNFLEGKDASAFAAKMRGGFWPALRMNWRVWTPLQFININYVPLKFRVLFAN
Sbjct: 121 FLMLFFLIMNFLEGKDASAFAAKMRGGFWPALRMNWRVWTPLQFININYVPLKFRVLFAN 180

Query: 181 LAALFWYAYLASLGK 195
           LAALFWYAYLASLGK
Sbjct: 181 LAALFWYAYLASLGK 195


>gi|4505241 Mpv17 protein [Homo sapiens]
          Length = 176

 Score = 80.1 bits (196), Expect = 1e-15
 Identities = 50/168 (29%), Positives = 85/168 (50%), Gaps = 5/168 (2%)

Query: 25  YLLFLRLYPVLTKAATSGILSALGNFLAQ-MIEKKRKKENSRSLDVGGPLRYAVYGFFFT 83
           Y   L  +P   +  T+G L  LG+ ++Q ++E++  +E+ R    G  L     G  F 
Sbjct: 7   YQRALAAHPWKVQVLTAGSLMGLGDIISQQLVERRGLQEHQR----GRTLTMVSLGCGFV 62

Query: 84  GPLSHFFYFFMEHWIPPEVPLAGLRRLLLDRLVFAPAFLMLFFLIMNFLEGKDASAFAAK 143
           GP+   +Y  ++ +IP    +  L+++LLD+  FAP FL  F  ++  L G  A    AK
Sbjct: 63  GPVVGGWYKVLDRFIPGTTKVDALKKMLLDQGGFAPCFLGCFLPLVGALNGLSAQDNWAK 122

Query: 144 MRGGFWPALRMNWRVWTPLQFININYVPLKFRVLFANLAALFWYAYLA 191
           ++  +  AL  N+ +W  +Q  N   VPL +R+      A+ W +YL+
Sbjct: 123 LQRDYPDALITNYYLWPAVQLANFYLVPLHYRLAVVQCVAVIWNSYLS 170


>gi|116235468 MPV17 mitochondrial membrane protein-like 2 [Homo
           sapiens]
          Length = 206

 Score = 73.9 bits (180), Expect = 8e-14
 Identities = 59/192 (30%), Positives = 88/192 (45%), Gaps = 16/192 (8%)

Query: 10  AEAGLGALPRRALAQYLLFLRLYPVLTKAATSGILSALGNFLAQMIEKKRKKENSRSLDV 69
           A  G   L R   A  LLF     ++T     G L A G+ + Q  E +     +R   V
Sbjct: 2   ARGGWRRLRRLLSAGQLLFQGRALLVTNTLGCGALMAAGDGVRQSWEIR-----ARPGQV 56

Query: 70  GGPLRYAVYGFFFTG----PLSHFFYFFMEHWIPPEVPLAG----LRRLLLDRLVFAPAF 121
             P R A    F  G    P  H++Y  ++   P    L G    L+++L+D+LV +P  
Sbjct: 57  FDPRRSA--SMFAVGCSMGPFLHYWYLSLDRLFPAS-GLRGFPNVLKKVLVDQLVASPLL 113

Query: 122 LMLFFLIMNFLEGKDASAFAAKMRGGFWPALRMNWRVWTPLQFININYVPLKFRVLFANL 181
            + +FL +  LEG+       ++R  FW   + +W VW   QF+N  +VP +FRV + N 
Sbjct: 114 GVWYFLGLGCLEGQTVGESCQELREKFWEFYKADWCVWPAAQFVNFLFVPPQFRVTYING 173

Query: 182 AALFWYAYLASL 193
             L W  YL+ L
Sbjct: 174 LTLGWDTYLSYL 185


>gi|190358477 MPV17 mitochondrial membrane protein-like isoform 1
           [Homo sapiens]
          Length = 196

 Score = 56.6 bits (135), Expect = 1e-08
 Identities = 40/161 (24%), Positives = 69/161 (42%), Gaps = 9/161 (5%)

Query: 30  RLYPVLTKAATSGILSALGNFLAQMIEKKRKKENSRSLDVGGPLRYAVYGFFFTGPLSHF 89
           R +P  T     G L + G+ L Q ++        R  +     R A     F    ++ 
Sbjct: 13  RRHPWPTNVLLYGSLVSAGDALQQRLQ-------GREANWRQTRRVATLVVTFHANFNYV 65

Query: 90  FYFFMEHWIPPEVPLAGLRRLLLDRLVFAPAFLMLFFLIMNFLEGKDASAFAAKMRGGFW 149
           +   +E  +P   P A L +LL D++V AP  +  F++ M+ L+GKD      K +  FW
Sbjct: 66  WLRLLERALPGRAPHALLAKLLCDQVVGAPIAVSAFYVGMSILQGKDDIFLDLKQK--FW 123

Query: 150 PALRMNWRVWTPLQFININYVPLKFRVLFANLAALFWYAYL 190
                    W  +Q  N + VP+++R  +A +    W  ++
Sbjct: 124 NTYLSGLMYWPFVQLTNFSLVPVQWRTAYAGVCGFLWATFI 164


>gi|38348340 diacylglycerol O-acyltransferase 2-like 6 [Homo
           sapiens]
          Length = 337

 Score = 27.3 bits (59), Expect = 8.4
 Identities = 22/82 (26%), Positives = 34/82 (41%), Gaps = 8/82 (9%)

Query: 92  FFMEHWIPPEVPLAGLRRLLLDRLVFAPAFLMLFFLIMNFLEGKDASAFAAKMRGGFWPA 151
           FF+  WIP  + L  +  LL+   +    F  L  L + +L       +    +GG   A
Sbjct: 16  FFVLQWIPVYIFLGAIPILLIPYFLLFSKFWPLAVLSLAWL----TYDWNTHSQGGRRSA 71

Query: 152 LRMNWRVWTPLQFININYVPLK 173
              NW +W   +    NY P+K
Sbjct: 72  WVRNWTLWKYFR----NYFPVK 89


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.332    0.144    0.459 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,628,465
Number of Sequences: 37866
Number of extensions: 267638
Number of successful extensions: 582
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 577
Number of HSP's gapped (non-prelim): 6
length of query: 195
length of database: 18,247,518
effective HSP length: 97
effective length of query: 98
effective length of database: 14,574,516
effective search space: 1428302568
effective search space used: 1428302568
T: 11
A: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.9 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.