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Search of human proteins with 8923526
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|8923526 HRAS-like suppressor 2 [Homo sapiens]
(162 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|8923526 HRAS-like suppressor 2 [Homo sapiens] 318 1e-87
gi|189571621 HRAS-like suppressor 3 [Homo sapiens] 223 6e-59
gi|189571618 HRAS-like suppressor 3 [Homo sapiens] 223 6e-59
gi|149588791 retinoic acid receptor responder (tazarotene induce... 160 3e-40
gi|9966859 HRAS-like suppressor [Homo sapiens] 143 7e-35
gi|16905367 HRAS-like suppressor family, member 5 isoform 1 [Hom... 140 6e-34
gi|226491950 HRAS-like suppressor family, member 5 isoform 2 [Ho... 140 6e-34
gi|226528146 HRAS-like suppressor family, member 5 isoform 3 [Ho... 108 3e-24
gi|46249410 lecithin retinol acyltransferase [Homo sapiens] 66 1e-11
gi|28557798 family with sequence similarity 84, member B [Homo s... 44 8e-05
gi|7949031 cytochrome P450, family 2, subfamily B, polypeptide 6... 35 0.037
gi|21553329 family with sequence similarity 84, member A [Homo s... 31 0.53
gi|7705320 hepatoma-derived growth factor, related protein 3 [Ho... 28 2.6
gi|58218986 thymocyte selection pathway associated [Homo sapiens] 28 4.5
gi|110349719 titin isoform N2-A [Homo sapiens] 27 7.7
gi|110349717 titin isoform novex-2 [Homo sapiens] 27 7.7
gi|110349713 titin isoform novex-1 [Homo sapiens] 27 7.7
gi|110349715 titin isoform N2-B [Homo sapiens] 27 7.7
>gi|8923526 HRAS-like suppressor 2 [Homo sapiens]
Length = 162
Score = 318 bits (816), Expect = 1e-87
Identities = 162/162 (100%), Positives = 162/162 (100%)
Query: 1 MALARPRPRLGDLIEISRFGYAHWAIYVGDGYVVHLAPASEIAGAGAASVLSALTNKAIV 60
MALARPRPRLGDLIEISRFGYAHWAIYVGDGYVVHLAPASEIAGAGAASVLSALTNKAIV
Sbjct: 1 MALARPRPRLGDLIEISRFGYAHWAIYVGDGYVVHLAPASEIAGAGAASVLSALTNKAIV 60
Query: 61 KKELLSVVAGGDNYRVNNKHDDRYTPLPSNKIVKRAEELVGQELPYSLTSDNCEHFVNHL 120
KKELLSVVAGGDNYRVNNKHDDRYTPLPSNKIVKRAEELVGQELPYSLTSDNCEHFVNHL
Sbjct: 61 KKELLSVVAGGDNYRVNNKHDDRYTPLPSNKIVKRAEELVGQELPYSLTSDNCEHFVNHL 120
Query: 121 RYGVSRSDQVTGAVTTVGVAAGLLAAASLVGILLARSKRERQ 162
RYGVSRSDQVTGAVTTVGVAAGLLAAASLVGILLARSKRERQ
Sbjct: 121 RYGVSRSDQVTGAVTTVGVAAGLLAAASLVGILLARSKRERQ 162
>gi|189571621 HRAS-like suppressor 3 [Homo sapiens]
Length = 162
Score = 223 bits (568), Expect = 6e-59
Identities = 109/157 (69%), Positives = 130/157 (82%)
Query: 6 PRPRLGDLIEISRFGYAHWAIYVGDGYVVHLAPASEIAGAGAASVLSALTNKAIVKKELL 65
P P+ GDLIEI R Y HWAIYVGDGYVVHLAP SE+AGAGAASV+SALT+KAIVKKELL
Sbjct: 6 PEPKPGDLIEIFRPFYRHWAIYVGDGYVVHLAPPSEVAGAGAASVMSALTDKAIVKKELL 65
Query: 66 SVVAGGDNYRVNNKHDDRYTPLPSNKIVKRAEELVGQELPYSLTSDNCEHFVNHLRYGVS 125
VAG D Y+VNNKHDD+Y+PLP +KI++RAEELVGQE+ Y LTS+NCEHFVN LRYGV+
Sbjct: 66 YDVAGSDKYQVNNKHDDKYSPLPCSKIIQRAEELVGQEVLYKLTSENCEHFVNELRYGVA 125
Query: 126 RSDQVTGAVTTVGVAAGLLAAASLVGILLARSKRERQ 162
RSDQV + VA LAA SL+G++ +R+KR++Q
Sbjct: 126 RSDQVRDVIIAASVAGMGLAAMSLIGVMFSRNKRQKQ 162
>gi|189571618 HRAS-like suppressor 3 [Homo sapiens]
Length = 162
Score = 223 bits (568), Expect = 6e-59
Identities = 109/157 (69%), Positives = 130/157 (82%)
Query: 6 PRPRLGDLIEISRFGYAHWAIYVGDGYVVHLAPASEIAGAGAASVLSALTNKAIVKKELL 65
P P+ GDLIEI R Y HWAIYVGDGYVVHLAP SE+AGAGAASV+SALT+KAIVKKELL
Sbjct: 6 PEPKPGDLIEIFRPFYRHWAIYVGDGYVVHLAPPSEVAGAGAASVMSALTDKAIVKKELL 65
Query: 66 SVVAGGDNYRVNNKHDDRYTPLPSNKIVKRAEELVGQELPYSLTSDNCEHFVNHLRYGVS 125
VAG D Y+VNNKHDD+Y+PLP +KI++RAEELVGQE+ Y LTS+NCEHFVN LRYGV+
Sbjct: 66 YDVAGSDKYQVNNKHDDKYSPLPCSKIIQRAEELVGQEVLYKLTSENCEHFVNELRYGVA 125
Query: 126 RSDQVTGAVTTVGVAAGLLAAASLVGILLARSKRERQ 162
RSDQV + VA LAA SL+G++ +R+KR++Q
Sbjct: 126 RSDQVRDVIIAASVAGMGLAAMSLIGVMFSRNKRQKQ 162
>gi|149588791 retinoic acid receptor responder (tazarotene induced)
3 [Homo sapiens]
Length = 164
Score = 160 bits (406), Expect = 3e-40
Identities = 81/143 (56%), Positives = 95/143 (66%)
Query: 1 MALARPRPRLGDLIEISRFGYAHWAIYVGDGYVVHLAPASEIAGAGAASVLSALTNKAIV 60
MA P+ GDLIEI R GY HWA+Y+GDGYV+HLAP SE GAG++SV S L+N A V
Sbjct: 1 MASPHQEPKPGDLIEIFRLGYEHWALYIGDGYVIHLAPPSEYPGAGSSSVFSVLSNSAEV 60
Query: 61 KKELLSVVAGGDNYRVNNKHDDRYTPLPSNKIVKRAEELVGQELPYSLTSDNCEHFVNHL 120
K+E L V GG YRVNN D Y P P I+ A+E+VGQ++ YS+ S NCEHFV L
Sbjct: 61 KRERLEDVVGGCCYRVNNSLDHEYQPRPVEVIISSAKEMVGQKMKYSIVSRNCEHFVTQL 120
Query: 121 RYGVSRSDQVTGAVTTVGVAAGL 143
RYG SR QV A VGVA L
Sbjct: 121 RYGKSRCKQVEKAKVEVGVATAL 143
>gi|9966859 HRAS-like suppressor [Homo sapiens]
Length = 168
Score = 143 bits (360), Expect = 7e-35
Identities = 69/145 (47%), Positives = 96/145 (66%), Gaps = 1/145 (0%)
Query: 8 PRLGDLIEISRFGYAHWAIYVGDGYVVHLAPASEIAGAGAASVLSALTNKAIVKKELLSV 67
P GDLIE+ R GY HWA+Y+GDGYV+++AP I A S S ++KA+VK +LL
Sbjct: 15 PCPGDLIEVFRPGYQHWALYLGDGYVINIAPVDGIP-ASFTSAKSVFSSKALVKMQLLKD 73
Query: 68 VAGGDNYRVNNKHDDRYTPLPSNKIVKRAEELVGQELPYSLTSDNCEHFVNHLRYGVSRS 127
V G D YR+NNK+D+ Y PLP +I+KR+E ++GQE+ Y+L +NCEHFV LRYG S
Sbjct: 74 VVGNDTYRINNKYDETYPPLPVEEIIKRSEFVIGQEVAYNLLVNNCEHFVTLLRYGEGVS 133
Query: 128 DQVTGAVTTVGVAAGLLAAASLVGI 152
+Q A++TV + S +G+
Sbjct: 134 EQANRAISTVEFVTAAVGVFSFLGL 158
>gi|16905367 HRAS-like suppressor family, member 5 isoform 1 [Homo
sapiens]
Length = 279
Score = 140 bits (352), Expect = 6e-34
Identities = 76/146 (52%), Positives = 95/146 (65%), Gaps = 2/146 (1%)
Query: 2 ALARPRPRLGDLIEISRFGYAHWAIYVGDGYVVHLAPASEIAGAGAASVLSALTNKAIVK 61
A +PRPR GDLIEI R GY HWAIYV D VVHLAP SE G S+ S +N+A+VK
Sbjct: 124 AEGKPRPRPGDLIEIFRIGYEHWAIYVEDDCVVHLAPPSEEFEVG--SITSIFSNRAVVK 181
Query: 62 KELLSVVAGGDNYRVNNKHDDRYTPLPSNKIVKRAEELVGQELPYSLTSDNCEHFVNHLR 121
L V G +++VNNK D Y PLP +KI++R +++V + + YSL NCEHFVN LR
Sbjct: 182 YSRLEDVLHGCSWKVNNKLDGTYLPLPVDKIIQRTKKMVNKIVQYSLIEGNCEHFVNGLR 241
Query: 122 YGVSRSDQVTGAVTTVGVAAGLLAAA 147
YGV RS QV A+ AAG + +A
Sbjct: 242 YGVPRSQQVEHALMEGAKAAGAVISA 267
>gi|226491950 HRAS-like suppressor family, member 5 isoform 2 [Homo
sapiens]
Length = 269
Score = 140 bits (352), Expect = 6e-34
Identities = 76/146 (52%), Positives = 95/146 (65%), Gaps = 2/146 (1%)
Query: 2 ALARPRPRLGDLIEISRFGYAHWAIYVGDGYVVHLAPASEIAGAGAASVLSALTNKAIVK 61
A +PRPR GDLIEI R GY HWAIYV D VVHLAP SE G S+ S +N+A+VK
Sbjct: 114 AEGKPRPRPGDLIEIFRIGYEHWAIYVEDDCVVHLAPPSEEFEVG--SITSIFSNRAVVK 171
Query: 62 KELLSVVAGGDNYRVNNKHDDRYTPLPSNKIVKRAEELVGQELPYSLTSDNCEHFVNHLR 121
L V G +++VNNK D Y PLP +KI++R +++V + + YSL NCEHFVN LR
Sbjct: 172 YSRLEDVLHGCSWKVNNKLDGTYLPLPVDKIIQRTKKMVNKIVQYSLIEGNCEHFVNGLR 231
Query: 122 YGVSRSDQVTGAVTTVGVAAGLLAAA 147
YGV RS QV A+ AAG + +A
Sbjct: 232 YGVPRSQQVEHALMEGAKAAGAVISA 257
>gi|226528146 HRAS-like suppressor family, member 5 isoform 3 [Homo
sapiens]
Length = 253
Score = 108 bits (269), Expect = 3e-24
Identities = 57/112 (50%), Positives = 73/112 (65%), Gaps = 2/112 (1%)
Query: 2 ALARPRPRLGDLIEISRFGYAHWAIYVGDGYVVHLAPASEIAGAGAASVLSALTNKAIVK 61
A +PRPR GDLIEI R GY HWAIYV D VVHLAP SE G S+ S +N+A+VK
Sbjct: 124 AEGKPRPRPGDLIEIFRIGYEHWAIYVEDDCVVHLAPPSEEFEVG--SITSIFSNRAVVK 181
Query: 62 KELLSVVAGGDNYRVNNKHDDRYTPLPSNKIVKRAEELVGQELPYSLTSDNC 113
L V G +++VNNK D Y PLP +KI++R +++V + + YSL NC
Sbjct: 182 YSRLEDVLHGCSWKVNNKLDGTYLPLPVDKIIQRTKKMVNKIVQYSLIEGNC 233
>gi|46249410 lecithin retinol acyltransferase [Homo sapiens]
Length = 230
Score = 66.2 bits (160), Expect = 1e-11
Identities = 48/161 (29%), Positives = 77/161 (47%), Gaps = 22/161 (13%)
Query: 11 GDLIEISRFGYAHWAIYVGDGYVVHLAPASEIA-----------GAGAASVLSALTNKAI 59
GD++E+ R H+ IY+GD V H+ P +A + +L + A
Sbjct: 48 GDVLEVPRTHLTHYGIYLGDNRVAHMMPDILLALTDDMGRTQKVVSNKRLILGVIVKVAS 107
Query: 60 VKKELLSVVAGGDNYRVNNKHDD-RYTPLPSNKIVKRAEELVGQELPYSLTSDNCEHFVN 118
++ + + A G N VN+ + + L + ++ +RAE+L+G PYSL +NCEHFV
Sbjct: 108 IRVDTVEDFAYGANILVNHLDESLQKKALLNEEVARRAEKLLGFT-PYSLLWNNCEHFVT 166
Query: 119 HLRYGVSRSDQVTGAVTTVGV---------AAGLLAAASLV 150
+ RYG S Q TV + A+ +L AS+V
Sbjct: 167 YCRYGTPISPQSDKFCETVKIIIRDQRSVLASAVLGLASIV 207
>gi|28557798 family with sequence similarity 84, member B [Homo
sapiens]
Length = 310
Score = 43.5 bits (101), Expect = 8e-05
Identities = 38/114 (33%), Positives = 52/114 (45%), Gaps = 22/114 (19%)
Query: 11 GDLIE-ISRFGYAHWAIYVGDGYVVHLAPASEIAGAGAASVLSALTNKAIVKKELLSVVA 69
GDL+E +S+ Y HWA+YVG+ VVHL ++ V L+ +
Sbjct: 119 GDLVEFVSQAQYPHWAVYVGNFQVVHL-------------------HRLEVINSFLTDAS 159
Query: 70 GGDNYRVNNKHDDRYTPLPSNKIVKRAEELVGQELPYSLTSDNCEHFVNHLRYG 123
G RV N RY PL S+ +V+ A VG + L+ N E F RYG
Sbjct: 160 QGRRGRVVNDL-YRYKPLSSSAVVRNALAHVGAK-ERELSWRNSESFAAWCRYG 211
>gi|7949031 cytochrome P450, family 2, subfamily B, polypeptide 6
[Homo sapiens]
Length = 491
Score = 34.7 bits (78), Expect = 0.037
Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 4/58 (6%)
Query: 5 RPRPRLGDLIEISRFG----YAHWAIYVGDGYVVHLAPASEIAGAGAASVLSALTNKA 58
RP P LG+L+++ R G + + GD + VHL P + G ++ AL +KA
Sbjct: 35 RPLPLLGNLLQMDRRGLLKSFLRFREKYGDVFTVHLGPRPVVMLCGVEAIREALVDKA 92
>gi|21553329 family with sequence similarity 84, member A [Homo
sapiens]
Length = 292
Score = 30.8 bits (68), Expect = 0.53
Identities = 14/32 (43%), Positives = 19/32 (59%), Gaps = 4/32 (12%)
Query: 23 HWAIYVGDGYVVHLAPA----SEIAGAGAASV 50
HWA+YVG G ++HL + AGAA+V
Sbjct: 143 HWAVYVGGGQIIHLHQGEIRQDSLYEAGAANV 174
>gi|7705320 hepatoma-derived growth factor, related protein 3
[Homo sapiens]
Length = 203
Score = 28.5 bits (62), Expect = 2.6
Identities = 13/25 (52%), Positives = 15/25 (60%), Gaps = 3/25 (12%)
Query: 3 LARPRPR---LGDLIEISRFGYAHW 24
+ARPRPR GDL+ GY HW
Sbjct: 1 MARPRPREYKAGDLVFAKMKGYPHW 25
>gi|58218986 thymocyte selection pathway associated [Homo sapiens]
Length = 641
Score = 27.7 bits (60), Expect = 4.5
Identities = 12/38 (31%), Positives = 23/38 (60%)
Query: 25 AIYVGDGYVVHLAPASEIAGAGAASVLSALTNKAIVKK 62
++ VGD ++VH + +E+ G V++ L + I+KK
Sbjct: 382 SVSVGDQFLVHQSETTEVLCEGIKKVVNVLACEKILKK 419
>gi|110349719 titin isoform N2-A [Homo sapiens]
Length = 33423
Score = 26.9 bits (58), Expect = 7.7
Identities = 13/35 (37%), Positives = 17/35 (48%)
Query: 89 SNKIVKRAEELVGQELPYSLTSDNCEHFVNHLRYG 123
+N +V+R + Q P S TS HF HL G
Sbjct: 17342 TNYVVERRDVASAQWSPLSATSKKKSHFAKHLNEG 17376
>gi|110349717 titin isoform novex-2 [Homo sapiens]
Length = 27118
Score = 26.9 bits (58), Expect = 7.7
Identities = 13/35 (37%), Positives = 17/35 (48%)
Query: 89 SNKIVKRAEELVGQELPYSLTSDNCEHFVNHLRYG 123
+N +V+R + Q P S TS HF HL G
Sbjct: 11037 TNYVVERRDVASAQWSPLSATSKKKSHFAKHLNEG 11071
>gi|110349713 titin isoform novex-1 [Homo sapiens]
Length = 27051
Score = 26.9 bits (58), Expect = 7.7
Identities = 13/35 (37%), Positives = 17/35 (48%)
Query: 89 SNKIVKRAEELVGQELPYSLTSDNCEHFVNHLRYG 123
+N +V+R + Q P S TS HF HL G
Sbjct: 10970 TNYVVERRDVASAQWSPLSATSKKKSHFAKHLNEG 11004
>gi|110349715 titin isoform N2-B [Homo sapiens]
Length = 26926
Score = 26.9 bits (58), Expect = 7.7
Identities = 13/35 (37%), Positives = 17/35 (48%)
Query: 89 SNKIVKRAEELVGQELPYSLTSDNCEHFVNHLRYG 123
+N +V+R + Q P S TS HF HL G
Sbjct: 10845 TNYVVERRDVASAQWSPLSATSKKKSHFAKHLNEG 10879
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.133 0.380
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,541,276
Number of Sequences: 37866
Number of extensions: 216729
Number of successful extensions: 515
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 493
Number of HSP's gapped (non-prelim): 18
length of query: 162
length of database: 18,247,518
effective HSP length: 94
effective length of query: 68
effective length of database: 14,688,114
effective search space: 998791752
effective search space used: 998791752
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.