BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|89058023 PREDICTED: hypothetical protein LOC284801 [Homo sapiens] (228 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|169214778 PREDICTED: hypothetical protein LOC284801 [Homo sap... 471 e-133 gi|89058023 PREDICTED: hypothetical protein LOC284801 [Homo sapi... 471 e-133 gi|89057843 PREDICTED: hypothetical protein LOC284801 [Homo sapi... 471 e-133 gi|22547159 tetratricopeptide repeat domain 19 [Homo sapiens] 40 0.001 gi|122937321 UNC homeobox [Homo sapiens] 40 0.002 gi|111118972 collagen, type XI, alpha 2 isoform 2 preproprotein ... 39 0.005 gi|111118968 collagen, type XI, alpha 2 isoform 3 preproprotein ... 39 0.005 gi|111118970 collagen, type XI, alpha 2 isoform 1 preproprotein ... 39 0.005 gi|40805823 collagen, type XXII, alpha 1 [Homo sapiens] 38 0.006 gi|48762934 alpha 2 type I collagen [Homo sapiens] 38 0.008 gi|239756597 PREDICTED: hypothetical protein [Homo sapiens] 37 0.011 gi|239744051 PREDICTED: hypothetical protein XP_002343025 [Homo ... 37 0.011 gi|237757312 synaptojanin 1 isoform c [Homo sapiens] 37 0.018 gi|239750121 PREDICTED: hypothetical protein XP_002347280 [Homo ... 37 0.018 gi|188219577 ring finger protein 19B isoform a [Homo sapiens] 37 0.018 gi|188219579 ring finger protein 19B isoform b [Homo sapiens] 37 0.018 gi|239749631 PREDICTED: hypothetical protein [Homo sapiens] 36 0.031 gi|239743906 PREDICTED: hypothetical protein XP_002342988 [Homo ... 36 0.031 gi|237757310 synaptojanin 1 isoform a [Homo sapiens] 35 0.041 gi|237757308 synaptojanin 1 isoform b [Homo sapiens] 35 0.041 gi|148539870 histone deacetylase 7 isoform d [Homo sapiens] 35 0.041 gi|169234807 histone deacetylase 7 isoform a [Homo sapiens] 35 0.041 gi|239757414 PREDICTED: hypothetical protein XP_002345432 [Homo ... 35 0.069 gi|224465238 hypothetical protein LOC283999 [Homo sapiens] 34 0.090 gi|89363017 alpha 2 type V collagen preproprotein [Homo sapiens] 34 0.090 gi|239755634 PREDICTED: hypothetical protein [Homo sapiens] 34 0.090 gi|239744429 PREDICTED: hypothetical protein XP_002343157 [Homo ... 34 0.090 gi|114431216 tumor protein p53 inducible protein 13 [Homo sapiens] 34 0.090 gi|13994287 BTE-binding protein 4 [Homo sapiens] 34 0.12 gi|239752764 PREDICTED: hypothetical protein [Homo sapiens] 34 0.12 >gi|169214778 PREDICTED: hypothetical protein LOC284801 [Homo sapiens] Length = 228 Score = 471 bits (1213), Expect = e-133 Identities = 228/228 (100%), Positives = 228/228 (100%) Query: 1 MVALHKGRIPPAGPSVLAGWDAADSERWLRAAFRPASDPPPPRVSSPPAPLPSRDRCGRR 60 MVALHKGRIPPAGPSVLAGWDAADSERWLRAAFRPASDPPPPRVSSPPAPLPSRDRCGRR Sbjct: 1 MVALHKGRIPPAGPSVLAGWDAADSERWLRAAFRPASDPPPPRVSSPPAPLPSRDRCGRR 60 Query: 61 RLRGTWSGRLALGKRPTVGARRSPGAGPGRRMDENHERCGPGVEFVAVVASGPRWRDQGL 120 RLRGTWSGRLALGKRPTVGARRSPGAGPGRRMDENHERCGPGVEFVAVVASGPRWRDQGL Sbjct: 61 RLRGTWSGRLALGKRPTVGARRSPGAGPGRRMDENHERCGPGVEFVAVVASGPRWRDQGL 120 Query: 121 VRQVLVGAEGLPASQAGRRGTALVSVAVGSRGRVFLVARPCLRFLPQPPLCGLPGALALA 180 VRQVLVGAEGLPASQAGRRGTALVSVAVGSRGRVFLVARPCLRFLPQPPLCGLPGALALA Sbjct: 121 VRQVLVGAEGLPASQAGRRGTALVSVAVGSRGRVFLVARPCLRFLPQPPLCGLPGALALA 180 Query: 181 VPGPCLSAPPSPPAARRSSLLPERLTGFTSVGGRVWDRTGHRLVEKKE 228 VPGPCLSAPPSPPAARRSSLLPERLTGFTSVGGRVWDRTGHRLVEKKE Sbjct: 181 VPGPCLSAPPSPPAARRSSLLPERLTGFTSVGGRVWDRTGHRLVEKKE 228 >gi|89058023 PREDICTED: hypothetical protein LOC284801 [Homo sapiens] Length = 228 Score = 471 bits (1213), Expect = e-133 Identities = 228/228 (100%), Positives = 228/228 (100%) Query: 1 MVALHKGRIPPAGPSVLAGWDAADSERWLRAAFRPASDPPPPRVSSPPAPLPSRDRCGRR 60 MVALHKGRIPPAGPSVLAGWDAADSERWLRAAFRPASDPPPPRVSSPPAPLPSRDRCGRR Sbjct: 1 MVALHKGRIPPAGPSVLAGWDAADSERWLRAAFRPASDPPPPRVSSPPAPLPSRDRCGRR 60 Query: 61 RLRGTWSGRLALGKRPTVGARRSPGAGPGRRMDENHERCGPGVEFVAVVASGPRWRDQGL 120 RLRGTWSGRLALGKRPTVGARRSPGAGPGRRMDENHERCGPGVEFVAVVASGPRWRDQGL Sbjct: 61 RLRGTWSGRLALGKRPTVGARRSPGAGPGRRMDENHERCGPGVEFVAVVASGPRWRDQGL 120 Query: 121 VRQVLVGAEGLPASQAGRRGTALVSVAVGSRGRVFLVARPCLRFLPQPPLCGLPGALALA 180 VRQVLVGAEGLPASQAGRRGTALVSVAVGSRGRVFLVARPCLRFLPQPPLCGLPGALALA Sbjct: 121 VRQVLVGAEGLPASQAGRRGTALVSVAVGSRGRVFLVARPCLRFLPQPPLCGLPGALALA 180 Query: 181 VPGPCLSAPPSPPAARRSSLLPERLTGFTSVGGRVWDRTGHRLVEKKE 228 VPGPCLSAPPSPPAARRSSLLPERLTGFTSVGGRVWDRTGHRLVEKKE Sbjct: 181 VPGPCLSAPPSPPAARRSSLLPERLTGFTSVGGRVWDRTGHRLVEKKE 228 >gi|89057843 PREDICTED: hypothetical protein LOC284801 [Homo sapiens] Length = 228 Score = 471 bits (1213), Expect = e-133 Identities = 228/228 (100%), Positives = 228/228 (100%) Query: 1 MVALHKGRIPPAGPSVLAGWDAADSERWLRAAFRPASDPPPPRVSSPPAPLPSRDRCGRR 60 MVALHKGRIPPAGPSVLAGWDAADSERWLRAAFRPASDPPPPRVSSPPAPLPSRDRCGRR Sbjct: 1 MVALHKGRIPPAGPSVLAGWDAADSERWLRAAFRPASDPPPPRVSSPPAPLPSRDRCGRR 60 Query: 61 RLRGTWSGRLALGKRPTVGARRSPGAGPGRRMDENHERCGPGVEFVAVVASGPRWRDQGL 120 RLRGTWSGRLALGKRPTVGARRSPGAGPGRRMDENHERCGPGVEFVAVVASGPRWRDQGL Sbjct: 61 RLRGTWSGRLALGKRPTVGARRSPGAGPGRRMDENHERCGPGVEFVAVVASGPRWRDQGL 120 Query: 121 VRQVLVGAEGLPASQAGRRGTALVSVAVGSRGRVFLVARPCLRFLPQPPLCGLPGALALA 180 VRQVLVGAEGLPASQAGRRGTALVSVAVGSRGRVFLVARPCLRFLPQPPLCGLPGALALA Sbjct: 121 VRQVLVGAEGLPASQAGRRGTALVSVAVGSRGRVFLVARPCLRFLPQPPLCGLPGALALA 180 Query: 181 VPGPCLSAPPSPPAARRSSLLPERLTGFTSVGGRVWDRTGHRLVEKKE 228 VPGPCLSAPPSPPAARRSSLLPERLTGFTSVGGRVWDRTGHRLVEKKE Sbjct: 181 VPGPCLSAPPSPPAARRSSLLPERLTGFTSVGGRVWDRTGHRLVEKKE 228 >gi|22547159 tetratricopeptide repeat domain 19 [Homo sapiens] Length = 501 Score = 40.4 bits (93), Expect = 0.001 Identities = 58/181 (32%), Positives = 74/181 (40%), Gaps = 24/181 (13%) Query: 33 FRPASDPPPPRVSSPPAPLPSRDRCGRRRLRGTWSG--RLALGKRPTVGARRSPGAGPGR 90 F + PPPP S P P+ R RRR R R A + +P G R Sbjct: 12 FARSPAPPPPSRSGAPPQPPATLRPSRRRTRPPRPADRRDAPADCAYLWRILTPRRGRAR 71 Query: 91 RMDENHERCGPGVEFVAVVASGPRWRDQGLVRQVLVGAEGL-PASQAGRRGT--ALVSVA 147 R D G V + GP +G R+V+ G E + PA + GR G+ L+S + Sbjct: 72 RSDVGARHRACGRRDVLLSRQGPA-NPEG-ARRVVGGQERVWPAVRRGRGGSMFRLLSWS 129 Query: 148 VGSRGRVFLVARPC----LRFLPQPPLCGLPGALALAVPGPCLSAPPS--PPAARRSSLL 201 +G RG + R C R LP GL G PGP + PPS P R LL Sbjct: 130 LG-RGFLRAAGRRCRGCSARLLP-----GLAGG-----PGPEVQVPPSRVAPHGRGPGLL 178 Query: 202 P 202 P Sbjct: 179 P 179 >gi|122937321 UNC homeobox [Homo sapiens] Length = 531 Score = 40.0 bits (92), Expect = 0.002 Identities = 53/189 (28%), Positives = 63/189 (33%), Gaps = 47/189 (24%) Query: 38 DPPPPRVSSP---------PAPLPSRDRCGRRRLRGTWSGRLALGKRPTVGARRSPGAGP 88 +PPPP P AP P G GT +R G P P Sbjct: 248 EPPPPAAKGPGAHASGAAGTAPAPP----GEPPAPGTCDPAFYPSQRSGAG----PQPRP 299 Query: 89 GRRMDENHERCGPGVEFVAVVASGPRWRDQGLVRQVLVGAEGLPASQAGRRGTALVSVAV 148 GR D++ CGPG AV GL + E L + RR A + A Sbjct: 300 GRPADKDAASCGPGAAVAAVERGA-----AGLPKASPFSVESLLSDSPPRRKAASNAAAA 354 Query: 149 GSRGRVFLVARPC-------------------LRFL-PQPPL---CGLPGALALAVPGPC 185 + G F PC L FL PQ L GL A A P P Sbjct: 355 AAAGLDFAPGLPCAPRTLIGKGHFLLYPITQPLGFLVPQAALKGGAGLEPAPKDAPPAP- 413 Query: 186 LSAPPSPPA 194 + PP+PPA Sbjct: 414 -AVPPAPPA 421 >gi|111118972 collagen, type XI, alpha 2 isoform 2 preproprotein [Homo sapiens] Length = 1650 Score = 38.5 bits (88), Expect = 0.005 Identities = 58/214 (27%), Positives = 70/214 (32%), Gaps = 21/214 (9%) Query: 11 PAGPSVLAGWDAADSERWLRAAFRPASDPPPPRVSSPPAPLPSRDRCGRRRLRGTWSGRL 70 P G G D A +R P P + PP PL R G G G+ Sbjct: 1191 PPGEGGPRGQDGAKGDRGEDGEPGQPGSPGPTGENGPPGPLGKRGPAGSPGSEGRQGGKG 1250 Query: 71 ALGKRPTVGARRSPG----AGPGRRMDENHERCGPGVEFVAVVASGPRWRDQGLVRQVLV 126 A G +GA G AGP + + R PG +V G V Sbjct: 1251 AKGDPGAIGAPGKTGPVGPAGPAGKPGPDGLRGLPG----SVGQQGRPGATGQAGPPGPV 1306 Query: 127 GAEGLPASQAGRRGTALVSVAVGSRGRVFLVARPCL------RFLPQPPLCGLPGALA-L 179 G GLP G RG A G G + L+ P R LP P G PG + Sbjct: 1307 GPPGLP----GLRGDAGAKGEKGHPGLIGLIGPPGEQGEKGDRGLPGPQ--GSPGQKGEM 1360 Query: 180 AVPGPCLSAPPSPPAARRSSLLPERLTGFTSVGG 213 +PG P P P+ G T GG Sbjct: 1361 GIPGASGPIGPGGPPGLPGPAGPKGAKGATGPGG 1394 >gi|111118968 collagen, type XI, alpha 2 isoform 3 preproprotein [Homo sapiens] Length = 1629 Score = 38.5 bits (88), Expect = 0.005 Identities = 58/214 (27%), Positives = 70/214 (32%), Gaps = 21/214 (9%) Query: 11 PAGPSVLAGWDAADSERWLRAAFRPASDPPPPRVSSPPAPLPSRDRCGRRRLRGTWSGRL 70 P G G D A +R P P + PP PL R G G G+ Sbjct: 1170 PPGEGGPRGQDGAKGDRGEDGEPGQPGSPGPTGENGPPGPLGKRGPAGSPGSEGRQGGKG 1229 Query: 71 ALGKRPTVGARRSPG----AGPGRRMDENHERCGPGVEFVAVVASGPRWRDQGLVRQVLV 126 A G +GA G AGP + + R PG +V G V Sbjct: 1230 AKGDPGAIGAPGKTGPVGPAGPAGKPGPDGLRGLPG----SVGQQGRPGATGQAGPPGPV 1285 Query: 127 GAEGLPASQAGRRGTALVSVAVGSRGRVFLVARPCL------RFLPQPPLCGLPGALA-L 179 G GLP G RG A G G + L+ P R LP P G PG + Sbjct: 1286 GPPGLP----GLRGDAGAKGEKGHPGLIGLIGPPGEQGEKGDRGLPGPQ--GSPGQKGEM 1339 Query: 180 AVPGPCLSAPPSPPAARRSSLLPERLTGFTSVGG 213 +PG P P P+ G T GG Sbjct: 1340 GIPGASGPIGPGGPPGLPGPAGPKGAKGATGPGG 1373 >gi|111118970 collagen, type XI, alpha 2 isoform 1 preproprotein [Homo sapiens] Length = 1736 Score = 38.5 bits (88), Expect = 0.005 Identities = 58/214 (27%), Positives = 70/214 (32%), Gaps = 21/214 (9%) Query: 11 PAGPSVLAGWDAADSERWLRAAFRPASDPPPPRVSSPPAPLPSRDRCGRRRLRGTWSGRL 70 P G G D A +R P P + PP PL R G G G+ Sbjct: 1277 PPGEGGPRGQDGAKGDRGEDGEPGQPGSPGPTGENGPPGPLGKRGPAGSPGSEGRQGGKG 1336 Query: 71 ALGKRPTVGARRSPG----AGPGRRMDENHERCGPGVEFVAVVASGPRWRDQGLVRQVLV 126 A G +GA G AGP + + R PG +V G V Sbjct: 1337 AKGDPGAIGAPGKTGPVGPAGPAGKPGPDGLRGLPG----SVGQQGRPGATGQAGPPGPV 1392 Query: 127 GAEGLPASQAGRRGTALVSVAVGSRGRVFLVARPCL------RFLPQPPLCGLPGALA-L 179 G GLP G RG A G G + L+ P R LP P G PG + Sbjct: 1393 GPPGLP----GLRGDAGAKGEKGHPGLIGLIGPPGEQGEKGDRGLPGPQ--GSPGQKGEM 1446 Query: 180 AVPGPCLSAPPSPPAARRSSLLPERLTGFTSVGG 213 +PG P P P+ G T GG Sbjct: 1447 GIPGASGPIGPGGPPGLPGPAGPKGAKGATGPGG 1480 >gi|40805823 collagen, type XXII, alpha 1 [Homo sapiens] Length = 1626 Score = 38.1 bits (87), Expect = 0.006 Identities = 65/223 (29%), Positives = 80/223 (35%), Gaps = 57/223 (25%) Query: 5 HKGRIPPAGP--SV----LAGWDAADSERWLRAA---------FRPASDPPPPRVSSPPA 49 H G P+GP SV L G D ER + A P DP P + PP Sbjct: 923 HVGAPGPSGPPGSVGAPGLRGTPGKDGERGEKGAAGEEGSPGPVGPRGDPGAPGLPGPPG 982 Query: 50 -----------------PLPSRDRCGRRRLRGTWSGRLALGKRPTVGARRSPG--AGPGR 90 PL ++ CG+ +RG S ALG + G R +PG PG Sbjct: 983 KGKDGEPGLRGSPGLPGPLGTKAACGK--VRG--SENCALGGQCVKGDRGAPGIPGSPGS 1038 Query: 91 RMDENHERCGPGVEFVAVVASGPRWRDQGLVRQVLVGAEGLPASQAGRRGTALVSVAVGS 150 R D GP SGP D+G G+ GLP G +G A A G+ Sbjct: 1039 RGDPGIGVAGPPGP------SGPPG-DKGSP-----GSRGLPGFP-GPQGPAGRDGAPGN 1085 Query: 151 RGRVFLVARPCLRFLPQPPLCGLPGALALAVPGPCLSAPPSPP 193 G +P L L P G + L C PP PP Sbjct: 1086 PGERGPPGKPGLSSLLSP------GDINLLAKDVCNDCPPGPP 1122 Score = 27.7 bits (60), Expect = 8.5 Identities = 56/207 (27%), Positives = 67/207 (32%), Gaps = 38/207 (18%) Query: 7 GRIPPAGPSVLAGWDAADSERWLRAAFRPASDPPPPRVSSPPAPLPSRDRCGRRRLRGTW 66 G + P GP+ G A + A A +P P P P G LRGT Sbjct: 889 GELGPQGPT---GPPGAKGQEGAHGAPGAAGNPGAPGHVGAPGPSGPPGSVGAPGLRGTP 945 Query: 67 SGRLALGKRPTVGARRSPG-AGPGRRMDENHERCGPGVEFVAVVASGPRWRDQGLVRQVL 125 G++ G SPG GP R PG A GP + + L Sbjct: 946 GKDGERGEKGAAGEEGSPGPVGP---------RGDPG----APGLPGPPGKGKD-GEPGL 991 Query: 126 VGAEGLP---------ASQAGRRGTALVSVAV-GSRGRVFLVARPCLRFLPQPPLCGLPG 175 G+ GLP G AL V G RG + P R G PG Sbjct: 992 RGSPGLPGPLGTKAACGKVRGSENCALGGQCVKGDRGAPGIPGSPGSR--------GDPG 1043 Query: 176 ALALAVPGPCLSAPPSPPAARRSSLLP 202 PGP S PP + S LP Sbjct: 1044 IGVAGPPGP--SGPPGDKGSPGSRGLP 1068 >gi|48762934 alpha 2 type I collagen [Homo sapiens] Length = 1366 Score = 37.7 bits (86), Expect = 0.008 Identities = 51/170 (30%), Positives = 63/170 (37%), Gaps = 22/170 (12%) Query: 11 PAGPSVLAGWDAADSERWLRAAFRPASDPPPPRVSSPPAPLPSRDRCGRRRLRGTWSGRL 70 P GP+ G A P P +S PP P G+ LRG + Sbjct: 770 PPGPAGSRGDGGPPGMTGFPGAAGRTGPPGPSGISGPPGP---PGPAGKEGLRGPRGDQG 826 Query: 71 ALGKRPTVGARRSPG-AGPGRRMDENHERCGPGVEFVAVVASGPRWRDQGLVRQVLVGAE 129 +G+ VGA PG AG E PG GP QGL+ G Sbjct: 827 PVGRTGEVGAVGPPGFAGEKGPSGEAGTAGPPG-------TPGP----QGLLG--APGIL 873 Query: 130 GLPASQAGRRGTALVSVAVGSRGRVFLVARPCLRFLP----QPPLCGLPG 175 GLP S+ G RG V+ AVG G + + P R P P + G PG Sbjct: 874 GLPGSR-GERGLPGVAGAVGEPGPLGIAGPPGARGPPGAVGSPGVNGAPG 922 Score = 28.9 bits (63), Expect = 3.8 Identities = 56/214 (26%), Positives = 70/214 (32%), Gaps = 29/214 (13%) Query: 7 GRIPPAGPSVLAGWDAADSERWLRAAFRPASDPPPPRVSSPPAPLPSRDRCGRRRLRGTW 66 G I GPS G D E + A A P S P + G + +G Sbjct: 604 GPIGSRGPSGPPGPDGNKGEPGVVGAVGTAGPSGP---SGLPGERGAAGIPGGKGEKGEP 660 Query: 67 SGRLALGKRPTVGARRSPGA----GPGRRMDENHERCGPGVEFVAVVASGPRWR--DQGL 120 R +G GAR +PGA GP + E G A GPR ++G Sbjct: 661 GLRGEIGNPGRDGARGAPGAVGAPGPAGATGDRGEAGAAGPAGPA----GPRGSPGERGE 716 Query: 121 VRQVLVGAEGLPASQAGRRGTALVSVAVGSRGRVFLVARPCLRFLPQPPLCGLPGALALA 180 V PA AG+ G A G +G +V P P+ Sbjct: 717 VGPAGPNGFAGPAGAAGQPGAKGERGAKGPKGENGVVG-------PTGPV---------G 760 Query: 181 VPGPCLSAPPSPPAARRSSLLPERLTGFTSVGGR 214 GP P PA R P +TGF GR Sbjct: 761 AAGPAGPNGPPGPAGSRGDGGPPGMTGFPGAAGR 794 >gi|239756597 PREDICTED: hypothetical protein [Homo sapiens] Length = 249 Score = 37.4 bits (85), Expect = 0.011 Identities = 47/162 (29%), Positives = 64/162 (39%), Gaps = 27/162 (16%) Query: 17 LAGWDAADSERWLRAAFRPASDPPPPRV---------------SSPPAPLPS----RDRC 57 LAGWD R L A + DP PP + + PAP+PS R R Sbjct: 64 LAGWDEKSPVRDLVWAGQVLEDPTPPLIGRRNTAGFVYFTLTLEARPAPVPSLSLRRGRG 123 Query: 58 GRRRLRGTWSGRLALGKRPTVGARRSPGAGPGRRMDEN-HERCGPGV----EFVAVVASG 112 G R A+ P+ R P G GR + ++ HER PG+ E + A Sbjct: 124 AAESAEGWRQERGAVCPGPSGWGRLRP-RGRGREVAQSRHERRPPGMRLARELEGIGAQA 182 Query: 113 PRWRDQGLVRQVLVGAEGLPASQ--AGRRGTALVSVAVGSRG 152 R +G+ +V AE + +Q A RR V +G G Sbjct: 183 RAVRAEGVQHRVAHHAETMHLAQGRAARRQLLQRGVQLGRSG 224 >gi|239744051 PREDICTED: hypothetical protein XP_002343025 [Homo sapiens] Length = 306 Score = 37.4 bits (85), Expect = 0.011 Identities = 24/52 (46%), Positives = 28/52 (53%), Gaps = 8/52 (15%) Query: 148 VGSRGRVFLVARPCLRFLPQPPLCGLP-------GALALAVPGPCLSAPPSP 192 VG R R L A C R LPQPPLC LP G++A ++ GP L P P Sbjct: 18 VGVR-RAPLWASLCDRRLPQPPLCVLPSTASSEVGSVAASIQGPALGTRPCP 68 >gi|237757312 synaptojanin 1 isoform c [Homo sapiens] Length = 1295 Score = 36.6 bits (83), Expect = 0.018 Identities = 47/180 (26%), Positives = 66/180 (36%), Gaps = 35/180 (19%) Query: 34 RPASDPPPPRVSSPPAPLPSRDRCGRRRLRGTWSGRLALGKRPTVG-ARRSPGAGPGRRM 92 RPA PP S +P P+R G + GT ++ +G ++ SP AG Sbjct: 1119 RPAPPQRPPPPSGARSPAPTRKEFGAPKSPGTT-------RKDNIGRSQPSPQAGLAGPG 1171 Query: 93 DENHERCGPGVEFVAVVASGPRWRDQGLVRQVLVGAEGLPASQAGRRGTALVSVAVGSRG 152 + P + A V S P+ + ++ P SQ+ T S+G Sbjct: 1172 PAGYSTARPTIPPRAGVISAPQSHARASAGRLT------PESQSKTSET--------SKG 1217 Query: 153 RVFL-------VARPCLRFLPQP------PLCGLPGALALAVPGPCLSAPPSPPAARRSS 199 FL A P LP P PL + + + P P L PP PP RSS Sbjct: 1218 STFLPEPLKPQAAFPPQSSLPPPAQRLQEPLVPVAAPMPQSGPQPNLETPPQPPPRSRSS 1277 >gi|239750121 PREDICTED: hypothetical protein XP_002347280 [Homo sapiens] Length = 402 Score = 36.6 bits (83), Expect = 0.018 Identities = 41/154 (26%), Positives = 57/154 (37%), Gaps = 30/154 (19%) Query: 2 VALHKGRIPPAGPSVLAGWDAADSERWLRAAFRPASDPPPPRVSSPPAPLPSRDRCGRRR 61 +++ G+ P AGPS A+ A PP RV + P+ SR +RR Sbjct: 108 ISVTLGQAPRAGPSA--------------ASSAAAGKTPPSRVPAEPS---SRRGASKRR 150 Query: 62 LRGTWSGRLALGKRPTVGARRSPGAG--------PGRRMDENHE--RCGPGVEFVAVVAS 111 G R GA R P A P + HE R PGV + ++ Sbjct: 151 ESWRTDGERLRSGRGCAGAARGPDASLDTRREGWPRAAVVGRHEARRLKPGVSVSSSLSP 210 Query: 112 GPRWRDQGLVRQVLVGAE---GLPASQAGRRGTA 142 GP + + + L G PA+ RGTA Sbjct: 211 GPPLQRSSSLNETLRGRRPPGPAPAAAGATRGTA 244 >gi|188219577 ring finger protein 19B isoform a [Homo sapiens] Length = 732 Score = 36.6 bits (83), Expect = 0.018 Identities = 28/85 (32%), Positives = 34/85 (40%), Gaps = 12/85 (14%) Query: 25 SERWLRAAFRPASDPPPPRVSSPPAPLPSRDRCGRRRLRGTWSGRLALGKRPTVGARRSP 84 S R RA +P ++PPPP PPAP P+ + AL P A Sbjct: 42 SARGRRARAKPQAEPPPPAAQPPPAPAPAAAQGPPPE---------ALPAEPAAEAEAEA 92 Query: 85 GAG---PGRRMDENHERCGPGVEFV 106 A PG +E E GPG E V Sbjct: 93 AAAAAEPGFDDEEAAEGGGPGAEEV 117 >gi|188219579 ring finger protein 19B isoform b [Homo sapiens] Length = 587 Score = 36.6 bits (83), Expect = 0.018 Identities = 28/85 (32%), Positives = 34/85 (40%), Gaps = 12/85 (14%) Query: 25 SERWLRAAFRPASDPPPPRVSSPPAPLPSRDRCGRRRLRGTWSGRLALGKRPTVGARRSP 84 S R RA +P ++PPPP PPAP P+ + AL P A Sbjct: 42 SARGRRARAKPQAEPPPPAAQPPPAPAPAAAQGPPPE---------ALPAEPAAEAEAEA 92 Query: 85 GAG---PGRRMDENHERCGPGVEFV 106 A PG +E E GPG E V Sbjct: 93 AAAAAEPGFDDEEAAEGGGPGAEEV 117 >gi|239749631 PREDICTED: hypothetical protein [Homo sapiens] Length = 217 Score = 35.8 bits (81), Expect = 0.031 Identities = 45/156 (28%), Positives = 57/156 (36%), Gaps = 17/156 (10%) Query: 43 RVSSPPAPLPSRDRCGRRRLRGTWSGRLALGKRPTVGARRSPGAGPGRRMDENHERCGPG 102 R + PP P SR+R +G WS ALG P A P R GP Sbjct: 54 RRAEPPEPSYSRERRETMEGKGGWSA--ALGSLPPPPAAACTALKPATRRGSCSAPLGPA 111 Query: 103 VEFVAVVASGPRWRDQGLVRQVLVGAEGLPASQAGRRGTALVSVAVGSRGRVFLVARPCL 162 A PR G R GAE R T+ S++ +RG + + Sbjct: 112 RR---CSARRPRLHQGGAGRLAAGGAEAGERRSPNRGATS--SLSPIARGAADVRPFSWV 166 Query: 163 RFLPQPPLCGLPGALALAVPGPCLSAPPSPPAARRS 198 LP+PP P AL L + PP+P RS Sbjct: 167 GGLPRPP---APAALRLLL-------PPAPRRRARS 192 Score = 30.4 bits (67), Expect = 1.3 Identities = 27/71 (38%), Positives = 29/71 (40%), Gaps = 3/71 (4%) Query: 19 GWDAADSERWLRAAFRPASDPPPPRVSSPPAPLPSRDRCGRR--RLRGTWSGRLALGKRP 76 GW AA A + P R S APL RC R RL +GRLA G Sbjct: 76 GWSAALGSLPPPPAAACTALKPATRRGSCSAPLGPARRCSARRPRLHQGGAGRLAAG-GA 134 Query: 77 TVGARRSPGAG 87 G RRSP G Sbjct: 135 EAGERRSPNRG 145 >gi|239743906 PREDICTED: hypothetical protein XP_002342988 [Homo sapiens] Length = 217 Score = 35.8 bits (81), Expect = 0.031 Identities = 45/156 (28%), Positives = 57/156 (36%), Gaps = 17/156 (10%) Query: 43 RVSSPPAPLPSRDRCGRRRLRGTWSGRLALGKRPTVGARRSPGAGPGRRMDENHERCGPG 102 R + PP P SR+R +G WS ALG P A P R GP Sbjct: 54 RRAEPPEPSYSRERRETMEGKGGWSA--ALGSLPPPPAAACTALKPATRRGSCSAPLGPA 111 Query: 103 VEFVAVVASGPRWRDQGLVRQVLVGAEGLPASQAGRRGTALVSVAVGSRGRVFLVARPCL 162 A PR G R GAE R T+ S++ +RG + + Sbjct: 112 RR---CSARRPRLHQGGAGRLAAGGAEAGERRSPNRGATS--SLSPIARGAADVRPFSWV 166 Query: 163 RFLPQPPLCGLPGALALAVPGPCLSAPPSPPAARRS 198 LP+PP P AL L + PP+P RS Sbjct: 167 GGLPRPP---APAALRLLL-------PPAPRRRARS 192 Score = 30.4 bits (67), Expect = 1.3 Identities = 27/71 (38%), Positives = 29/71 (40%), Gaps = 3/71 (4%) Query: 19 GWDAADSERWLRAAFRPASDPPPPRVSSPPAPLPSRDRCGRR--RLRGTWSGRLALGKRP 76 GW AA A + P R S APL RC R RL +GRLA G Sbjct: 76 GWSAALGSLPPPPAAACTALKPATRRGSCSAPLGPARRCSARRPRLHQGGAGRLAAG-GA 134 Query: 77 TVGARRSPGAG 87 G RRSP G Sbjct: 135 EAGERRSPNRG 145 >gi|237757310 synaptojanin 1 isoform a [Homo sapiens] Length = 1612 Score = 35.4 bits (80), Expect = 0.041 Identities = 53/189 (28%), Positives = 69/189 (36%), Gaps = 31/189 (16%) Query: 39 PPPPRVSSPPA-PLPSR---DRCGRRRLRGTWSGRLALGKRPTVG-ARRSPGA--GPGRR 91 PPPPR +PP P P + G R T +G P+ G ARR A PG Sbjct: 1147 PPPPRPVAPPTRPAPPQRPPPPSGARSPAPTRKEFGGIGAPPSPGVARREMEAPKSPGTT 1206 Query: 92 MDENHERCGPGVEFVAVVASGPRWRDQGLVRQVLVGAEG-LPASQAGRRGTA-------L 143 +N R P + +GP R + G + A Q+ R +A Sbjct: 1207 RKDNIGRSQPSPQ---AGLAGPGPAGYSTARPTIPPRAGVISAPQSHARASAGRLTPESQ 1263 Query: 144 VSVAVGSRGRVFL-------VARPCLRFLPQP------PLCGLPGALALAVPGPCLSAPP 190 + S+G FL A P LP P PL + + + P P L PP Sbjct: 1264 SKTSETSKGSTFLPEPLKPQAAFPPQSSLPPPAQRLQEPLVPVAAPMPQSGPQPNLETPP 1323 Query: 191 SPPAARRSS 199 PP RSS Sbjct: 1324 QPPPRSRSS 1332 >gi|237757308 synaptojanin 1 isoform b [Homo sapiens] Length = 1350 Score = 35.4 bits (80), Expect = 0.041 Identities = 53/189 (28%), Positives = 69/189 (36%), Gaps = 31/189 (16%) Query: 39 PPPPRVSSPPA-PLPSR---DRCGRRRLRGTWSGRLALGKRPTVG-ARRSPGA--GPGRR 91 PPPPR +PP P P + G R T +G P+ G ARR A PG Sbjct: 1147 PPPPRPVAPPTRPAPPQRPPPPSGARSPAPTRKEFGGIGAPPSPGVARREMEAPKSPGTT 1206 Query: 92 MDENHERCGPGVEFVAVVASGPRWRDQGLVRQVLVGAEG-LPASQAGRRGTA-------L 143 +N R P + +GP R + G + A Q+ R +A Sbjct: 1207 RKDNIGRSQPSPQ---AGLAGPGPAGYSTARPTIPPRAGVISAPQSHARASAGRLTPESQ 1263 Query: 144 VSVAVGSRGRVFL-------VARPCLRFLPQP------PLCGLPGALALAVPGPCLSAPP 190 + S+G FL A P LP P PL + + + P P L PP Sbjct: 1264 SKTSETSKGSTFLPEPLKPQAAFPPQSSLPPPAQRLQEPLVPVAAPMPQSGPQPNLETPP 1323 Query: 191 SPPAARRSS 199 PP RSS Sbjct: 1324 QPPPRSRSS 1332 >gi|148539870 histone deacetylase 7 isoform d [Homo sapiens] Length = 954 Score = 35.4 bits (80), Expect = 0.041 Identities = 34/125 (27%), Positives = 52/125 (41%), Gaps = 19/125 (15%) Query: 34 RPASDPPPPRVSSPPAPLPSRDRCGRRRLRGTWSGRLA-------LGKRPTVGARRSPGA 86 R S+P PP ++PP P P + R + + R A L + P+ + G Sbjct: 357 RTRSEPLPPSATAPPPPGPMQPRLEQLKTHVQVIKRSAKPSEKPRLRQIPSAEDLETDGG 416 Query: 87 GPGRRMDE--NHERCG---PGVEFVAVVASGPR---WRDQGLVRQVLVGAEG----LPAS 134 GPG+ +D+ H G P A + P+ W Q L ++ G+ G LP + Sbjct: 417 GPGQVVDDGLEHRELGHGQPEARGPAPLQQHPQVLLWEQQRLAGRLPRGSTGDTVLLPLA 476 Query: 135 QAGRR 139 Q G R Sbjct: 477 QGGHR 481 >gi|169234807 histone deacetylase 7 isoform a [Homo sapiens] Length = 991 Score = 35.4 bits (80), Expect = 0.041 Identities = 34/125 (27%), Positives = 52/125 (41%), Gaps = 19/125 (15%) Query: 34 RPASDPPPPRVSSPPAPLPSRDRCGRRRLRGTWSGRLA-------LGKRPTVGARRSPGA 86 R S+P PP ++PP P P + R + + R A L + P+ + G Sbjct: 394 RTRSEPLPPSATAPPPPGPMQPRLEQLKTHVQVIKRSAKPSEKPRLRQIPSAEDLETDGG 453 Query: 87 GPGRRMDE--NHERCG---PGVEFVAVVASGPR---WRDQGLVRQVLVGAEG----LPAS 134 GPG+ +D+ H G P A + P+ W Q L ++ G+ G LP + Sbjct: 454 GPGQVVDDGLEHRELGHGQPEARGPAPLQQHPQVLLWEQQRLAGRLPRGSTGDTVLLPLA 513 Query: 135 QAGRR 139 Q G R Sbjct: 514 QGGHR 518 >gi|239757414 PREDICTED: hypothetical protein XP_002345432 [Homo sapiens] Length = 176 Score = 34.7 bits (78), Expect = 0.069 Identities = 45/133 (33%), Positives = 54/133 (40%), Gaps = 12/133 (9%) Query: 24 DSERWLRAAFRPASDPPP---PRVSSPPAPLPSRDRCGRRRLRGTWSGRLALGKRPTVGA 80 D+ R AA R A+ P P P + PA S + RRR RGT AL + Sbjct: 42 DAARVDAAALRAAARPGPLGRPPTRAGPAQRSSCTQPHRRRRRGTRRLPPALTPAGPYHS 101 Query: 81 RRSPGAGPGRRMDENHERCGPGVEFVAVVASGPRWRDQGLVRQVLVGAEGLPASQAGRRG 140 R G GP + R P V GP+ D G RQV + G +QA RG Sbjct: 102 ARPGGGGP----CQGSARFSPDPAAVRPQPRGPQ-PDSGSARQVPPDSRG---AQALHRG 153 Query: 141 TALVSVAV-GSRG 152 L S A G RG Sbjct: 154 APLASPAPRGVRG 166 >gi|224465238 hypothetical protein LOC283999 [Homo sapiens] Length = 394 Score = 34.3 bits (77), Expect = 0.090 Identities = 47/163 (28%), Positives = 64/163 (39%), Gaps = 23/163 (14%) Query: 34 RPASDPPPPRVSSPPAPLPSRDRCGRRRLRGTWSGRLALGKRPTVGARRSPGAGPGRRMD 93 R +DPP SS P+R ++ W R + G R + PGA P R D Sbjct: 43 RSLADPPS---SSQALHSPAR------QVHLVWLLR-SRGFREIKERAQGPGASPWGRWD 92 Query: 94 ENHERCGPGVEFVAVVASGPRWRDQGLVRQVLVGAEGLPASQAGRRGTALVSVAVGSRGR 153 + P F A +++ + QG ++ G LPA+ G RG G G Sbjct: 93 WS-----PSPRFAARLSTSSPF-PQGRAQRPQRGGVDLPATPGGPRGQC-----AGRSGD 141 Query: 154 VFLVARPCLRFLPQPPLCGLPGALALAVPGPCLSAPPSPPAAR 196 V + R R PP+ LP A P + PSPPA R Sbjct: 142 V--LRRAGRRRARPPPVPRLPAPRAPRRPRGPATPDPSPPAGR 182 Score = 30.4 bits (67), Expect = 1.3 Identities = 32/90 (35%), Positives = 41/90 (45%), Gaps = 9/90 (10%) Query: 11 PAGPSVLAGWDAADSERWLRAAFRPASDPPP-PRVSSPPAPLPSRDRC------GRRRLR 63 PA P G A S LR A R + PPP PR+ +P AP R R Sbjct: 125 PATPGGPRGQCAGRSGDVLRRAGRRRARPPPVPRLPAPRAPRRPRGPATPDPSPPAGRPH 184 Query: 64 GTWSGRLALGKRPTVGAR-RSPGAGPGRRM 92 G +GR A G+RP A+ R+PG +R+ Sbjct: 185 GP-AGRAAPGRRPGCTAQLRAPGRRGRQRL 213 >gi|89363017 alpha 2 type V collagen preproprotein [Homo sapiens] Length = 1499 Score = 34.3 bits (77), Expect = 0.090 Identities = 49/198 (24%), Positives = 70/198 (35%), Gaps = 21/198 (10%) Query: 13 GPSVLAGWDAADSERWLRAAFRPASDPPPPRVSSPPAPLPSRDRCGRRRLRGTWSGRLAL 72 GP + G + P +P P + P P + G R GT + Sbjct: 459 GPQGIRGQPGDPGVPGFKGEAGPKGEPGPHGIQGPIGPPGEEGKRGPRGDPGTVGPPGPV 518 Query: 73 GKRPTVGARRSPGAG--PGRRMDENHERCGPGVEFVAVVASGPRWRDQGLVRQVLVGAEG 130 G+R G R PG+ PG + + GP V +SGP+ R G G Sbjct: 519 GERGAPGNRGFPGSDGLPGPKGAQGER--GP------VGSSGPKGSQGDPGRP---GEPG 567 Query: 131 LPASQAGRRGTALVSVAVGSRGRVFLVARPCLRFLPQPP----LCGLPGALALAVPGPCL 186 LP G RG G G++ + P P PP + G PG++ L P Sbjct: 568 LP----GARGLTGNPGVQGPEGKLGPLGAPGEDGRPGPPGSIGIRGQPGSMGLPGPKGSS 623 Query: 187 SAPPSPPAARRSSLLPER 204 P P A + + +R Sbjct: 624 GDPGKPGEAGNAGVPGQR 641 Score = 28.9 bits (63), Expect = 3.8 Identities = 52/192 (27%), Positives = 67/192 (34%), Gaps = 28/192 (14%) Query: 11 PAGPSVLAGWDAADSERWLRAAFRPASDPPPPRVSSPPAPLPSRDRCGRRRLRGTWSGRL 70 PAG G D A ER R PA P P P+ + G+ RG R Sbjct: 1051 PAGNDGTPGRDGAVGERGDRGDPGPAGLPGSQGAPGTPGPVGAPGDAGQ---RGDPGSRG 1107 Query: 71 ALGKRPTVGARRSPG-AGPGRRMDENHERCGPGVEFVAVVASGPRWRDQGLVRQVLVGAE 129 +G G R PG GP ++ +R G G R G + Sbjct: 1108 PIGPPGRAGKRGLPGPQGPRGDKGDHGDRGDRG-------QKGHRG---------FTGLQ 1151 Query: 130 GLPASQA--GRRGTALVSVAVGSRGRVFLVARPCLRFLPQP--PL--CGLPGALALAVP- 182 GLP G +G+A + G RG V P P P+ G+ G++ A P Sbjct: 1152 GLPGPPGPNGEQGSAGIPGPFGPRGPPGPVGPSGKEGNPGPLGPIGPPGVRGSVGEAGPE 1211 Query: 183 -GPCLSAPPSPP 193 P PP PP Sbjct: 1212 GPPGEPGPPGPP 1223 >gi|239755634 PREDICTED: hypothetical protein [Homo sapiens] Length = 449 Score = 34.3 bits (77), Expect = 0.090 Identities = 55/207 (26%), Positives = 71/207 (34%), Gaps = 44/207 (21%) Query: 2 VALHKGRIPPAGPSVLAGWDAADSERWLRAAFRPASDPPPPRVSSPPAPLPSRDRCGRRR 61 +++ G+ P AGPS A+ A PP RV + P+ SR +RR Sbjct: 108 ISVTLGQAPRAGPSA--------------ASSAAAGKTPPSRVPAEPS---SRRGASKRR 150 Query: 62 LRGTWSGRLALGKRPTVGARRSPGAG--------PGRRMDENHE--RCGPGVEFVAVVAS 111 G R GA R P A P + HE R PGV + ++ Sbjct: 151 ESWRTDGERLRSGRGCAGAARGPDASLDTRREGWPRAAVVGRHEARRLKPGVSVSSSLSP 210 Query: 112 GPRWRDQGLVRQVLVGAEGLPASQAGRRGTALVSVAVGSRGRVFLVARPCLRFLPQ-PPL 170 GP + + + L A S A G RP RFL + Sbjct: 211 GPPLQRSSSLNETLRSAAAHAESSARECGKR--------------TQRPEQRFLCRGSSF 256 Query: 171 CG-LPGALALAVPGPCLSAPPSP-PAA 195 CG P L P P PP P PAA Sbjct: 257 CGHRPQRLHPGRPLPPQRRPPGPAPAA 283 >gi|239744429 PREDICTED: hypothetical protein XP_002343157 [Homo sapiens] Length = 449 Score = 34.3 bits (77), Expect = 0.090 Identities = 55/207 (26%), Positives = 71/207 (34%), Gaps = 44/207 (21%) Query: 2 VALHKGRIPPAGPSVLAGWDAADSERWLRAAFRPASDPPPPRVSSPPAPLPSRDRCGRRR 61 +++ G+ P AGPS A+ A PP RV + P+ SR +RR Sbjct: 108 ISVTLGQAPRAGPSA--------------ASSAAAGKTPPSRVPAEPS---SRRGASKRR 150 Query: 62 LRGTWSGRLALGKRPTVGARRSPGAG--------PGRRMDENHE--RCGPGVEFVAVVAS 111 G R GA R P A P + HE R PGV + ++ Sbjct: 151 ESWRTDGERLRSGRGCAGAARGPDASLDTRREGWPRAAVVGRHEARRLKPGVSVSSSLSP 210 Query: 112 GPRWRDQGLVRQVLVGAEGLPASQAGRRGTALVSVAVGSRGRVFLVARPCLRFLPQ-PPL 170 GP + + + L A S A G RP RFL + Sbjct: 211 GPPLQRSSSLNETLRSAAAHAESSARECGKR--------------TQRPEQRFLCRGSSF 256 Query: 171 CG-LPGALALAVPGPCLSAPPSP-PAA 195 CG P L P P PP P PAA Sbjct: 257 CGHRPQRLHPGRPLPPQRRPPGPAPAA 283 >gi|114431216 tumor protein p53 inducible protein 13 [Homo sapiens] Length = 393 Score = 34.3 bits (77), Expect = 0.090 Identities = 22/51 (43%), Positives = 24/51 (47%), Gaps = 6/51 (11%) Query: 39 PPPPRVSSPPAPLPSRDRCGRRRLRGTWSGRLALGKRPTVGARRSPGAGPG 89 PP V+S PS RRRLR ALG +PT A R P A PG Sbjct: 184 PPGTEVTSQGPRQPSSSGAKRRRLRA------ALGPQPTRSALRFPSASPG 228 >gi|13994287 BTE-binding protein 4 [Homo sapiens] Length = 252 Score = 33.9 bits (76), Expect = 0.12 Identities = 16/44 (36%), Positives = 20/44 (45%) Query: 4 LHKGRIPPAGPSVLAGWDAADSERWLRAAFRPASDPPPPRVSSP 47 +H+GR P G AG D + R + P PPPP S P Sbjct: 25 VHRGRPGPEGAGPAAGLDVRAARREAASPGTPGPPPPPPAASGP 68 >gi|239752764 PREDICTED: hypothetical protein [Homo sapiens] Length = 370 Score = 33.9 bits (76), Expect = 0.12 Identities = 56/191 (29%), Positives = 65/191 (34%), Gaps = 51/191 (26%) Query: 58 GRRRL-----RGTWSGRLALGKRPTVGARRSPGAGPGRRMDENHERCGPGVEFVAVVASG 112 GRRR RG G ALG RR PG R + G A + G Sbjct: 72 GRRRACPGRGRGGLPGAAALGAGAQQPRRRRLAQPPGSRAPL---QVGGAPRRRAHLTGG 128 Query: 113 PRWRDQGLVRQVLVGAEGLPASQAGRRGTALVSVAVGSRGRVFLVARPCLRFLPQPPLCG 172 P R L A GLPAS+A L + +R R+ L + R LP P G Sbjct: 129 PPRRRPPR----LAAAHGLPASEA----PGLRPDSARTRLRLRLASARLPRGLPPAPAAG 180 Query: 173 L--------------------------PG--------ALALAVPGPCLSAPPSPPAARRS 198 L PG +L P PCL PP+PPAAR Sbjct: 181 LWRAGCTRLRPLLLQPPPMLSPGLAQSPGVELHARTLSLPAPSPAPCLP-PPAPPAARTP 239 Query: 199 SLLPERLTGFT 209 S T FT Sbjct: 240 SAHSPAHTHFT 250 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.320 0.139 0.450 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 12,520,258 Number of Sequences: 37866 Number of extensions: 772675 Number of successful extensions: 7687 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 77 Number of HSP's successfully gapped in prelim test: 312 Number of HSP's that attempted gapping in prelim test: 6916 Number of HSP's gapped (non-prelim): 1081 length of query: 228 length of database: 18,247,518 effective HSP length: 99 effective length of query: 129 effective length of database: 14,498,784 effective search space: 1870343136 effective search space used: 1870343136 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.