Guide to the Human Genome
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Search of human proteins with 89058023

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|89058023 PREDICTED: hypothetical protein LOC284801 [Homo
sapiens]
         (228 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|169214778 PREDICTED: hypothetical protein LOC284801 [Homo sap...   471   e-133
gi|89058023 PREDICTED: hypothetical protein LOC284801 [Homo sapi...   471   e-133
gi|89057843 PREDICTED: hypothetical protein LOC284801 [Homo sapi...   471   e-133
gi|22547159 tetratricopeptide repeat domain 19 [Homo sapiens]          40   0.001
gi|122937321 UNC homeobox [Homo sapiens]                               40   0.002
gi|111118972 collagen, type XI, alpha 2 isoform 2 preproprotein ...    39   0.005
gi|111118968 collagen, type XI, alpha 2 isoform 3 preproprotein ...    39   0.005
gi|111118970 collagen, type XI, alpha 2 isoform 1 preproprotein ...    39   0.005
gi|40805823 collagen, type XXII, alpha 1 [Homo sapiens]                38   0.006
gi|48762934 alpha 2 type I collagen [Homo sapiens]                     38   0.008
gi|239756597 PREDICTED: hypothetical protein [Homo sapiens]            37   0.011
gi|239744051 PREDICTED: hypothetical protein XP_002343025 [Homo ...    37   0.011
gi|237757312 synaptojanin 1 isoform c [Homo sapiens]                   37   0.018
gi|239750121 PREDICTED: hypothetical protein XP_002347280 [Homo ...    37   0.018
gi|188219577 ring finger protein 19B isoform a [Homo sapiens]          37   0.018
gi|188219579 ring finger protein 19B isoform b [Homo sapiens]          37   0.018
gi|239749631 PREDICTED: hypothetical protein [Homo sapiens]            36   0.031
gi|239743906 PREDICTED: hypothetical protein XP_002342988 [Homo ...    36   0.031
gi|237757310 synaptojanin 1 isoform a [Homo sapiens]                   35   0.041
gi|237757308 synaptojanin 1 isoform b [Homo sapiens]                   35   0.041
gi|148539870 histone deacetylase 7 isoform d [Homo sapiens]            35   0.041
gi|169234807 histone deacetylase 7 isoform a [Homo sapiens]            35   0.041
gi|239757414 PREDICTED: hypothetical protein XP_002345432 [Homo ...    35   0.069
gi|224465238 hypothetical protein LOC283999 [Homo sapiens]             34   0.090
gi|89363017 alpha 2 type V collagen preproprotein [Homo sapiens]       34   0.090
gi|239755634 PREDICTED: hypothetical protein [Homo sapiens]            34   0.090
gi|239744429 PREDICTED: hypothetical protein XP_002343157 [Homo ...    34   0.090
gi|114431216 tumor protein p53 inducible protein 13 [Homo sapiens]     34   0.090
gi|13994287 BTE-binding protein 4 [Homo sapiens]                       34   0.12 
gi|239752764 PREDICTED: hypothetical protein [Homo sapiens]            34   0.12 

>gi|169214778 PREDICTED: hypothetical protein LOC284801 [Homo
           sapiens]
          Length = 228

 Score =  471 bits (1213), Expect = e-133
 Identities = 228/228 (100%), Positives = 228/228 (100%)

Query: 1   MVALHKGRIPPAGPSVLAGWDAADSERWLRAAFRPASDPPPPRVSSPPAPLPSRDRCGRR 60
           MVALHKGRIPPAGPSVLAGWDAADSERWLRAAFRPASDPPPPRVSSPPAPLPSRDRCGRR
Sbjct: 1   MVALHKGRIPPAGPSVLAGWDAADSERWLRAAFRPASDPPPPRVSSPPAPLPSRDRCGRR 60

Query: 61  RLRGTWSGRLALGKRPTVGARRSPGAGPGRRMDENHERCGPGVEFVAVVASGPRWRDQGL 120
           RLRGTWSGRLALGKRPTVGARRSPGAGPGRRMDENHERCGPGVEFVAVVASGPRWRDQGL
Sbjct: 61  RLRGTWSGRLALGKRPTVGARRSPGAGPGRRMDENHERCGPGVEFVAVVASGPRWRDQGL 120

Query: 121 VRQVLVGAEGLPASQAGRRGTALVSVAVGSRGRVFLVARPCLRFLPQPPLCGLPGALALA 180
           VRQVLVGAEGLPASQAGRRGTALVSVAVGSRGRVFLVARPCLRFLPQPPLCGLPGALALA
Sbjct: 121 VRQVLVGAEGLPASQAGRRGTALVSVAVGSRGRVFLVARPCLRFLPQPPLCGLPGALALA 180

Query: 181 VPGPCLSAPPSPPAARRSSLLPERLTGFTSVGGRVWDRTGHRLVEKKE 228
           VPGPCLSAPPSPPAARRSSLLPERLTGFTSVGGRVWDRTGHRLVEKKE
Sbjct: 181 VPGPCLSAPPSPPAARRSSLLPERLTGFTSVGGRVWDRTGHRLVEKKE 228


>gi|89058023 PREDICTED: hypothetical protein LOC284801 [Homo
           sapiens]
          Length = 228

 Score =  471 bits (1213), Expect = e-133
 Identities = 228/228 (100%), Positives = 228/228 (100%)

Query: 1   MVALHKGRIPPAGPSVLAGWDAADSERWLRAAFRPASDPPPPRVSSPPAPLPSRDRCGRR 60
           MVALHKGRIPPAGPSVLAGWDAADSERWLRAAFRPASDPPPPRVSSPPAPLPSRDRCGRR
Sbjct: 1   MVALHKGRIPPAGPSVLAGWDAADSERWLRAAFRPASDPPPPRVSSPPAPLPSRDRCGRR 60

Query: 61  RLRGTWSGRLALGKRPTVGARRSPGAGPGRRMDENHERCGPGVEFVAVVASGPRWRDQGL 120
           RLRGTWSGRLALGKRPTVGARRSPGAGPGRRMDENHERCGPGVEFVAVVASGPRWRDQGL
Sbjct: 61  RLRGTWSGRLALGKRPTVGARRSPGAGPGRRMDENHERCGPGVEFVAVVASGPRWRDQGL 120

Query: 121 VRQVLVGAEGLPASQAGRRGTALVSVAVGSRGRVFLVARPCLRFLPQPPLCGLPGALALA 180
           VRQVLVGAEGLPASQAGRRGTALVSVAVGSRGRVFLVARPCLRFLPQPPLCGLPGALALA
Sbjct: 121 VRQVLVGAEGLPASQAGRRGTALVSVAVGSRGRVFLVARPCLRFLPQPPLCGLPGALALA 180

Query: 181 VPGPCLSAPPSPPAARRSSLLPERLTGFTSVGGRVWDRTGHRLVEKKE 228
           VPGPCLSAPPSPPAARRSSLLPERLTGFTSVGGRVWDRTGHRLVEKKE
Sbjct: 181 VPGPCLSAPPSPPAARRSSLLPERLTGFTSVGGRVWDRTGHRLVEKKE 228


>gi|89057843 PREDICTED: hypothetical protein LOC284801 [Homo
           sapiens]
          Length = 228

 Score =  471 bits (1213), Expect = e-133
 Identities = 228/228 (100%), Positives = 228/228 (100%)

Query: 1   MVALHKGRIPPAGPSVLAGWDAADSERWLRAAFRPASDPPPPRVSSPPAPLPSRDRCGRR 60
           MVALHKGRIPPAGPSVLAGWDAADSERWLRAAFRPASDPPPPRVSSPPAPLPSRDRCGRR
Sbjct: 1   MVALHKGRIPPAGPSVLAGWDAADSERWLRAAFRPASDPPPPRVSSPPAPLPSRDRCGRR 60

Query: 61  RLRGTWSGRLALGKRPTVGARRSPGAGPGRRMDENHERCGPGVEFVAVVASGPRWRDQGL 120
           RLRGTWSGRLALGKRPTVGARRSPGAGPGRRMDENHERCGPGVEFVAVVASGPRWRDQGL
Sbjct: 61  RLRGTWSGRLALGKRPTVGARRSPGAGPGRRMDENHERCGPGVEFVAVVASGPRWRDQGL 120

Query: 121 VRQVLVGAEGLPASQAGRRGTALVSVAVGSRGRVFLVARPCLRFLPQPPLCGLPGALALA 180
           VRQVLVGAEGLPASQAGRRGTALVSVAVGSRGRVFLVARPCLRFLPQPPLCGLPGALALA
Sbjct: 121 VRQVLVGAEGLPASQAGRRGTALVSVAVGSRGRVFLVARPCLRFLPQPPLCGLPGALALA 180

Query: 181 VPGPCLSAPPSPPAARRSSLLPERLTGFTSVGGRVWDRTGHRLVEKKE 228
           VPGPCLSAPPSPPAARRSSLLPERLTGFTSVGGRVWDRTGHRLVEKKE
Sbjct: 181 VPGPCLSAPPSPPAARRSSLLPERLTGFTSVGGRVWDRTGHRLVEKKE 228


>gi|22547159 tetratricopeptide repeat domain 19 [Homo sapiens]
          Length = 501

 Score = 40.4 bits (93), Expect = 0.001
 Identities = 58/181 (32%), Positives = 74/181 (40%), Gaps = 24/181 (13%)

Query: 33  FRPASDPPPPRVSSPPAPLPSRDRCGRRRLRGTWSG--RLALGKRPTVGARRSPGAGPGR 90
           F  +  PPPP  S  P   P+  R  RRR R       R A      +    +P  G  R
Sbjct: 12  FARSPAPPPPSRSGAPPQPPATLRPSRRRTRPPRPADRRDAPADCAYLWRILTPRRGRAR 71

Query: 91  RMDENHERCGPGVEFVAVVASGPRWRDQGLVRQVLVGAEGL-PASQAGRRGT--ALVSVA 147
           R D        G   V +   GP    +G  R+V+ G E + PA + GR G+   L+S +
Sbjct: 72  RSDVGARHRACGRRDVLLSRQGPA-NPEG-ARRVVGGQERVWPAVRRGRGGSMFRLLSWS 129

Query: 148 VGSRGRVFLVARPC----LRFLPQPPLCGLPGALALAVPGPCLSAPPS--PPAARRSSLL 201
           +G RG +    R C     R LP     GL G      PGP +  PPS   P  R   LL
Sbjct: 130 LG-RGFLRAAGRRCRGCSARLLP-----GLAGG-----PGPEVQVPPSRVAPHGRGPGLL 178

Query: 202 P 202
           P
Sbjct: 179 P 179


>gi|122937321 UNC homeobox [Homo sapiens]
          Length = 531

 Score = 40.0 bits (92), Expect = 0.002
 Identities = 53/189 (28%), Positives = 63/189 (33%), Gaps = 47/189 (24%)

Query: 38  DPPPPRVSSP---------PAPLPSRDRCGRRRLRGTWSGRLALGKRPTVGARRSPGAGP 88
           +PPPP    P          AP P     G     GT        +R   G    P   P
Sbjct: 248 EPPPPAAKGPGAHASGAAGTAPAPP----GEPPAPGTCDPAFYPSQRSGAG----PQPRP 299

Query: 89  GRRMDENHERCGPGVEFVAVVASGPRWRDQGLVRQVLVGAEGLPASQAGRRGTALVSVAV 148
           GR  D++   CGPG    AV          GL +      E L +    RR  A  + A 
Sbjct: 300 GRPADKDAASCGPGAAVAAVERGA-----AGLPKASPFSVESLLSDSPPRRKAASNAAAA 354

Query: 149 GSRGRVFLVARPC-------------------LRFL-PQPPL---CGLPGALALAVPGPC 185
            + G  F    PC                   L FL PQ  L    GL  A   A P P 
Sbjct: 355 AAAGLDFAPGLPCAPRTLIGKGHFLLYPITQPLGFLVPQAALKGGAGLEPAPKDAPPAP- 413

Query: 186 LSAPPSPPA 194
            + PP+PPA
Sbjct: 414 -AVPPAPPA 421


>gi|111118972 collagen, type XI, alpha 2 isoform 2 preproprotein [Homo
            sapiens]
          Length = 1650

 Score = 38.5 bits (88), Expect = 0.005
 Identities = 58/214 (27%), Positives = 70/214 (32%), Gaps = 21/214 (9%)

Query: 11   PAGPSVLAGWDAADSERWLRAAFRPASDPPPPRVSSPPAPLPSRDRCGRRRLRGTWSGRL 70
            P G     G D A  +R           P P   + PP PL  R   G     G   G+ 
Sbjct: 1191 PPGEGGPRGQDGAKGDRGEDGEPGQPGSPGPTGENGPPGPLGKRGPAGSPGSEGRQGGKG 1250

Query: 71   ALGKRPTVGARRSPG----AGPGRRMDENHERCGPGVEFVAVVASGPRWRDQGLVRQVLV 126
            A G    +GA    G    AGP  +   +  R  PG    +V   G             V
Sbjct: 1251 AKGDPGAIGAPGKTGPVGPAGPAGKPGPDGLRGLPG----SVGQQGRPGATGQAGPPGPV 1306

Query: 127  GAEGLPASQAGRRGTALVSVAVGSRGRVFLVARPCL------RFLPQPPLCGLPGALA-L 179
            G  GLP    G RG A      G  G + L+  P        R LP P   G PG    +
Sbjct: 1307 GPPGLP----GLRGDAGAKGEKGHPGLIGLIGPPGEQGEKGDRGLPGPQ--GSPGQKGEM 1360

Query: 180  AVPGPCLSAPPSPPAARRSSLLPERLTGFTSVGG 213
             +PG      P  P        P+   G T  GG
Sbjct: 1361 GIPGASGPIGPGGPPGLPGPAGPKGAKGATGPGG 1394


>gi|111118968 collagen, type XI, alpha 2 isoform 3 preproprotein [Homo
            sapiens]
          Length = 1629

 Score = 38.5 bits (88), Expect = 0.005
 Identities = 58/214 (27%), Positives = 70/214 (32%), Gaps = 21/214 (9%)

Query: 11   PAGPSVLAGWDAADSERWLRAAFRPASDPPPPRVSSPPAPLPSRDRCGRRRLRGTWSGRL 70
            P G     G D A  +R           P P   + PP PL  R   G     G   G+ 
Sbjct: 1170 PPGEGGPRGQDGAKGDRGEDGEPGQPGSPGPTGENGPPGPLGKRGPAGSPGSEGRQGGKG 1229

Query: 71   ALGKRPTVGARRSPG----AGPGRRMDENHERCGPGVEFVAVVASGPRWRDQGLVRQVLV 126
            A G    +GA    G    AGP  +   +  R  PG    +V   G             V
Sbjct: 1230 AKGDPGAIGAPGKTGPVGPAGPAGKPGPDGLRGLPG----SVGQQGRPGATGQAGPPGPV 1285

Query: 127  GAEGLPASQAGRRGTALVSVAVGSRGRVFLVARPCL------RFLPQPPLCGLPGALA-L 179
            G  GLP    G RG A      G  G + L+  P        R LP P   G PG    +
Sbjct: 1286 GPPGLP----GLRGDAGAKGEKGHPGLIGLIGPPGEQGEKGDRGLPGPQ--GSPGQKGEM 1339

Query: 180  AVPGPCLSAPPSPPAARRSSLLPERLTGFTSVGG 213
             +PG      P  P        P+   G T  GG
Sbjct: 1340 GIPGASGPIGPGGPPGLPGPAGPKGAKGATGPGG 1373


>gi|111118970 collagen, type XI, alpha 2 isoform 1 preproprotein [Homo
            sapiens]
          Length = 1736

 Score = 38.5 bits (88), Expect = 0.005
 Identities = 58/214 (27%), Positives = 70/214 (32%), Gaps = 21/214 (9%)

Query: 11   PAGPSVLAGWDAADSERWLRAAFRPASDPPPPRVSSPPAPLPSRDRCGRRRLRGTWSGRL 70
            P G     G D A  +R           P P   + PP PL  R   G     G   G+ 
Sbjct: 1277 PPGEGGPRGQDGAKGDRGEDGEPGQPGSPGPTGENGPPGPLGKRGPAGSPGSEGRQGGKG 1336

Query: 71   ALGKRPTVGARRSPG----AGPGRRMDENHERCGPGVEFVAVVASGPRWRDQGLVRQVLV 126
            A G    +GA    G    AGP  +   +  R  PG    +V   G             V
Sbjct: 1337 AKGDPGAIGAPGKTGPVGPAGPAGKPGPDGLRGLPG----SVGQQGRPGATGQAGPPGPV 1392

Query: 127  GAEGLPASQAGRRGTALVSVAVGSRGRVFLVARPCL------RFLPQPPLCGLPGALA-L 179
            G  GLP    G RG A      G  G + L+  P        R LP P   G PG    +
Sbjct: 1393 GPPGLP----GLRGDAGAKGEKGHPGLIGLIGPPGEQGEKGDRGLPGPQ--GSPGQKGEM 1446

Query: 180  AVPGPCLSAPPSPPAARRSSLLPERLTGFTSVGG 213
             +PG      P  P        P+   G T  GG
Sbjct: 1447 GIPGASGPIGPGGPPGLPGPAGPKGAKGATGPGG 1480


>gi|40805823 collagen, type XXII, alpha 1 [Homo sapiens]
          Length = 1626

 Score = 38.1 bits (87), Expect = 0.006
 Identities = 65/223 (29%), Positives = 80/223 (35%), Gaps = 57/223 (25%)

Query: 5    HKGRIPPAGP--SV----LAGWDAADSERWLRAA---------FRPASDPPPPRVSSPPA 49
            H G   P+GP  SV    L G    D ER  + A           P  DP  P +  PP 
Sbjct: 923  HVGAPGPSGPPGSVGAPGLRGTPGKDGERGEKGAAGEEGSPGPVGPRGDPGAPGLPGPPG 982

Query: 50   -----------------PLPSRDRCGRRRLRGTWSGRLALGKRPTVGARRSPG--AGPGR 90
                             PL ++  CG+  +RG  S   ALG +   G R +PG    PG 
Sbjct: 983  KGKDGEPGLRGSPGLPGPLGTKAACGK--VRG--SENCALGGQCVKGDRGAPGIPGSPGS 1038

Query: 91   RMDENHERCGPGVEFVAVVASGPRWRDQGLVRQVLVGAEGLPASQAGRRGTALVSVAVGS 150
            R D      GP         SGP   D+G       G+ GLP    G +G A    A G+
Sbjct: 1039 RGDPGIGVAGPPGP------SGPPG-DKGSP-----GSRGLPGFP-GPQGPAGRDGAPGN 1085

Query: 151  RGRVFLVARPCLRFLPQPPLCGLPGALALAVPGPCLSAPPSPP 193
             G      +P L  L  P      G + L     C   PP PP
Sbjct: 1086 PGERGPPGKPGLSSLLSP------GDINLLAKDVCNDCPPGPP 1122



 Score = 27.7 bits (60), Expect = 8.5
 Identities = 56/207 (27%), Positives = 67/207 (32%), Gaps = 38/207 (18%)

Query: 7    GRIPPAGPSVLAGWDAADSERWLRAAFRPASDPPPPRVSSPPAPLPSRDRCGRRRLRGTW 66
            G + P GP+   G   A  +     A   A +P  P     P P       G   LRGT 
Sbjct: 889  GELGPQGPT---GPPGAKGQEGAHGAPGAAGNPGAPGHVGAPGPSGPPGSVGAPGLRGTP 945

Query: 67   SGRLALGKRPTVGARRSPG-AGPGRRMDENHERCGPGVEFVAVVASGPRWRDQGLVRQVL 125
                  G++   G   SPG  GP         R  PG    A    GP  + +      L
Sbjct: 946  GKDGERGEKGAAGEEGSPGPVGP---------RGDPG----APGLPGPPGKGKD-GEPGL 991

Query: 126  VGAEGLP---------ASQAGRRGTALVSVAV-GSRGRVFLVARPCLRFLPQPPLCGLPG 175
             G+ GLP             G    AL    V G RG   +   P  R        G PG
Sbjct: 992  RGSPGLPGPLGTKAACGKVRGSENCALGGQCVKGDRGAPGIPGSPGSR--------GDPG 1043

Query: 176  ALALAVPGPCLSAPPSPPAARRSSLLP 202
                  PGP  S PP    +  S  LP
Sbjct: 1044 IGVAGPPGP--SGPPGDKGSPGSRGLP 1068


>gi|48762934 alpha 2 type I collagen [Homo sapiens]
          Length = 1366

 Score = 37.7 bits (86), Expect = 0.008
 Identities = 51/170 (30%), Positives = 63/170 (37%), Gaps = 22/170 (12%)

Query: 11  PAGPSVLAGWDAADSERWLRAAFRPASDPPPPRVSSPPAPLPSRDRCGRRRLRGTWSGRL 70
           P GP+   G            A      P P  +S PP P       G+  LRG    + 
Sbjct: 770 PPGPAGSRGDGGPPGMTGFPGAAGRTGPPGPSGISGPPGP---PGPAGKEGLRGPRGDQG 826

Query: 71  ALGKRPTVGARRSPG-AGPGRRMDENHERCGPGVEFVAVVASGPRWRDQGLVRQVLVGAE 129
            +G+   VGA   PG AG      E      PG         GP    QGL+     G  
Sbjct: 827 PVGRTGEVGAVGPPGFAGEKGPSGEAGTAGPPG-------TPGP----QGLLG--APGIL 873

Query: 130 GLPASQAGRRGTALVSVAVGSRGRVFLVARPCLRFLP----QPPLCGLPG 175
           GLP S+ G RG   V+ AVG  G + +   P  R  P     P + G PG
Sbjct: 874 GLPGSR-GERGLPGVAGAVGEPGPLGIAGPPGARGPPGAVGSPGVNGAPG 922



 Score = 28.9 bits (63), Expect = 3.8
 Identities = 56/214 (26%), Positives = 70/214 (32%), Gaps = 29/214 (13%)

Query: 7   GRIPPAGPSVLAGWDAADSERWLRAAFRPASDPPPPRVSSPPAPLPSRDRCGRRRLRGTW 66
           G I   GPS   G D    E  +  A   A    P   S  P    +    G +  +G  
Sbjct: 604 GPIGSRGPSGPPGPDGNKGEPGVVGAVGTAGPSGP---SGLPGERGAAGIPGGKGEKGEP 660

Query: 67  SGRLALGKRPTVGARRSPGA----GPGRRMDENHERCGPGVEFVAVVASGPRWR--DQGL 120
             R  +G     GAR +PGA    GP     +  E    G    A    GPR    ++G 
Sbjct: 661 GLRGEIGNPGRDGARGAPGAVGAPGPAGATGDRGEAGAAGPAGPA----GPRGSPGERGE 716

Query: 121 VRQVLVGAEGLPASQAGRRGTALVSVAVGSRGRVFLVARPCLRFLPQPPLCGLPGALALA 180
           V          PA  AG+ G      A G +G   +V        P  P+          
Sbjct: 717 VGPAGPNGFAGPAGAAGQPGAKGERGAKGPKGENGVVG-------PTGPV---------G 760

Query: 181 VPGPCLSAPPSPPAARRSSLLPERLTGFTSVGGR 214
             GP     P  PA  R    P  +TGF    GR
Sbjct: 761 AAGPAGPNGPPGPAGSRGDGGPPGMTGFPGAAGR 794


>gi|239756597 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 249

 Score = 37.4 bits (85), Expect = 0.011
 Identities = 47/162 (29%), Positives = 64/162 (39%), Gaps = 27/162 (16%)

Query: 17  LAGWDAADSERWLRAAFRPASDPPPPRV---------------SSPPAPLPS----RDRC 57
           LAGWD     R L  A +   DP PP +                + PAP+PS    R R 
Sbjct: 64  LAGWDEKSPVRDLVWAGQVLEDPTPPLIGRRNTAGFVYFTLTLEARPAPVPSLSLRRGRG 123

Query: 58  GRRRLRGTWSGRLALGKRPTVGARRSPGAGPGRRMDEN-HERCGPGV----EFVAVVASG 112
                 G    R A+   P+   R  P  G GR + ++ HER  PG+    E   + A  
Sbjct: 124 AAESAEGWRQERGAVCPGPSGWGRLRP-RGRGREVAQSRHERRPPGMRLARELEGIGAQA 182

Query: 113 PRWRDQGLVRQVLVGAEGLPASQ--AGRRGTALVSVAVGSRG 152
              R +G+  +V   AE +  +Q  A RR      V +G  G
Sbjct: 183 RAVRAEGVQHRVAHHAETMHLAQGRAARRQLLQRGVQLGRSG 224


>gi|239744051 PREDICTED: hypothetical protein XP_002343025 [Homo
           sapiens]
          Length = 306

 Score = 37.4 bits (85), Expect = 0.011
 Identities = 24/52 (46%), Positives = 28/52 (53%), Gaps = 8/52 (15%)

Query: 148 VGSRGRVFLVARPCLRFLPQPPLCGLP-------GALALAVPGPCLSAPPSP 192
           VG R R  L A  C R LPQPPLC LP       G++A ++ GP L   P P
Sbjct: 18  VGVR-RAPLWASLCDRRLPQPPLCVLPSTASSEVGSVAASIQGPALGTRPCP 68


>gi|237757312 synaptojanin 1 isoform c [Homo sapiens]
          Length = 1295

 Score = 36.6 bits (83), Expect = 0.018
 Identities = 47/180 (26%), Positives = 66/180 (36%), Gaps = 35/180 (19%)

Query: 34   RPASDPPPPRVSSPPAPLPSRDRCGRRRLRGTWSGRLALGKRPTVG-ARRSPGAGPGRRM 92
            RPA    PP  S   +P P+R   G  +  GT        ++  +G ++ SP AG     
Sbjct: 1119 RPAPPQRPPPPSGARSPAPTRKEFGAPKSPGTT-------RKDNIGRSQPSPQAGLAGPG 1171

Query: 93   DENHERCGPGVEFVAVVASGPRWRDQGLVRQVLVGAEGLPASQAGRRGTALVSVAVGSRG 152
               +    P +   A V S P+   +    ++       P SQ+    T        S+G
Sbjct: 1172 PAGYSTARPTIPPRAGVISAPQSHARASAGRLT------PESQSKTSET--------SKG 1217

Query: 153  RVFL-------VARPCLRFLPQP------PLCGLPGALALAVPGPCLSAPPSPPAARRSS 199
              FL        A P    LP P      PL  +   +  + P P L  PP PP   RSS
Sbjct: 1218 STFLPEPLKPQAAFPPQSSLPPPAQRLQEPLVPVAAPMPQSGPQPNLETPPQPPPRSRSS 1277


>gi|239750121 PREDICTED: hypothetical protein XP_002347280 [Homo
           sapiens]
          Length = 402

 Score = 36.6 bits (83), Expect = 0.018
 Identities = 41/154 (26%), Positives = 57/154 (37%), Gaps = 30/154 (19%)

Query: 2   VALHKGRIPPAGPSVLAGWDAADSERWLRAAFRPASDPPPPRVSSPPAPLPSRDRCGRRR 61
           +++  G+ P AGPS               A+   A   PP RV + P+   SR    +RR
Sbjct: 108 ISVTLGQAPRAGPSA--------------ASSAAAGKTPPSRVPAEPS---SRRGASKRR 150

Query: 62  LRGTWSGRLALGKRPTVGARRSPGAG--------PGRRMDENHE--RCGPGVEFVAVVAS 111
                 G      R   GA R P A         P   +   HE  R  PGV   + ++ 
Sbjct: 151 ESWRTDGERLRSGRGCAGAARGPDASLDTRREGWPRAAVVGRHEARRLKPGVSVSSSLSP 210

Query: 112 GPRWRDQGLVRQVLVGAE---GLPASQAGRRGTA 142
           GP  +    + + L G       PA+    RGTA
Sbjct: 211 GPPLQRSSSLNETLRGRRPPGPAPAAAGATRGTA 244


>gi|188219577 ring finger protein 19B isoform a [Homo sapiens]
          Length = 732

 Score = 36.6 bits (83), Expect = 0.018
 Identities = 28/85 (32%), Positives = 34/85 (40%), Gaps = 12/85 (14%)

Query: 25  SERWLRAAFRPASDPPPPRVSSPPAPLPSRDRCGRRRLRGTWSGRLALGKRPTVGARRSP 84
           S R  RA  +P ++PPPP    PPAP P+  +              AL   P   A    
Sbjct: 42  SARGRRARAKPQAEPPPPAAQPPPAPAPAAAQGPPPE---------ALPAEPAAEAEAEA 92

Query: 85  GAG---PGRRMDENHERCGPGVEFV 106
            A    PG   +E  E  GPG E V
Sbjct: 93  AAAAAEPGFDDEEAAEGGGPGAEEV 117


>gi|188219579 ring finger protein 19B isoform b [Homo sapiens]
          Length = 587

 Score = 36.6 bits (83), Expect = 0.018
 Identities = 28/85 (32%), Positives = 34/85 (40%), Gaps = 12/85 (14%)

Query: 25  SERWLRAAFRPASDPPPPRVSSPPAPLPSRDRCGRRRLRGTWSGRLALGKRPTVGARRSP 84
           S R  RA  +P ++PPPP    PPAP P+  +              AL   P   A    
Sbjct: 42  SARGRRARAKPQAEPPPPAAQPPPAPAPAAAQGPPPE---------ALPAEPAAEAEAEA 92

Query: 85  GAG---PGRRMDENHERCGPGVEFV 106
            A    PG   +E  E  GPG E V
Sbjct: 93  AAAAAEPGFDDEEAAEGGGPGAEEV 117


>gi|239749631 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 217

 Score = 35.8 bits (81), Expect = 0.031
 Identities = 45/156 (28%), Positives = 57/156 (36%), Gaps = 17/156 (10%)

Query: 43  RVSSPPAPLPSRDRCGRRRLRGTWSGRLALGKRPTVGARRSPGAGPGRRMDENHERCGPG 102
           R + PP P  SR+R      +G WS   ALG  P   A       P  R        GP 
Sbjct: 54  RRAEPPEPSYSRERRETMEGKGGWSA--ALGSLPPPPAAACTALKPATRRGSCSAPLGPA 111

Query: 103 VEFVAVVASGPRWRDQGLVRQVLVGAEGLPASQAGRRGTALVSVAVGSRGRVFLVARPCL 162
                  A  PR    G  R    GAE        R  T+  S++  +RG   +     +
Sbjct: 112 RR---CSARRPRLHQGGAGRLAAGGAEAGERRSPNRGATS--SLSPIARGAADVRPFSWV 166

Query: 163 RFLPQPPLCGLPGALALAVPGPCLSAPPSPPAARRS 198
             LP+PP    P AL L +       PP+P    RS
Sbjct: 167 GGLPRPP---APAALRLLL-------PPAPRRRARS 192



 Score = 30.4 bits (67), Expect = 1.3
 Identities = 27/71 (38%), Positives = 29/71 (40%), Gaps = 3/71 (4%)

Query: 19  GWDAADSERWLRAAFRPASDPPPPRVSSPPAPLPSRDRCGRR--RLRGTWSGRLALGKRP 76
           GW AA        A    +  P  R  S  APL    RC  R  RL    +GRLA G   
Sbjct: 76  GWSAALGSLPPPPAAACTALKPATRRGSCSAPLGPARRCSARRPRLHQGGAGRLAAG-GA 134

Query: 77  TVGARRSPGAG 87
             G RRSP  G
Sbjct: 135 EAGERRSPNRG 145


>gi|239743906 PREDICTED: hypothetical protein XP_002342988 [Homo
           sapiens]
          Length = 217

 Score = 35.8 bits (81), Expect = 0.031
 Identities = 45/156 (28%), Positives = 57/156 (36%), Gaps = 17/156 (10%)

Query: 43  RVSSPPAPLPSRDRCGRRRLRGTWSGRLALGKRPTVGARRSPGAGPGRRMDENHERCGPG 102
           R + PP P  SR+R      +G WS   ALG  P   A       P  R        GP 
Sbjct: 54  RRAEPPEPSYSRERRETMEGKGGWSA--ALGSLPPPPAAACTALKPATRRGSCSAPLGPA 111

Query: 103 VEFVAVVASGPRWRDQGLVRQVLVGAEGLPASQAGRRGTALVSVAVGSRGRVFLVARPCL 162
                  A  PR    G  R    GAE        R  T+  S++  +RG   +     +
Sbjct: 112 RR---CSARRPRLHQGGAGRLAAGGAEAGERRSPNRGATS--SLSPIARGAADVRPFSWV 166

Query: 163 RFLPQPPLCGLPGALALAVPGPCLSAPPSPPAARRS 198
             LP+PP    P AL L +       PP+P    RS
Sbjct: 167 GGLPRPP---APAALRLLL-------PPAPRRRARS 192



 Score = 30.4 bits (67), Expect = 1.3
 Identities = 27/71 (38%), Positives = 29/71 (40%), Gaps = 3/71 (4%)

Query: 19  GWDAADSERWLRAAFRPASDPPPPRVSSPPAPLPSRDRCGRR--RLRGTWSGRLALGKRP 76
           GW AA        A    +  P  R  S  APL    RC  R  RL    +GRLA G   
Sbjct: 76  GWSAALGSLPPPPAAACTALKPATRRGSCSAPLGPARRCSARRPRLHQGGAGRLAAG-GA 134

Query: 77  TVGARRSPGAG 87
             G RRSP  G
Sbjct: 135 EAGERRSPNRG 145


>gi|237757310 synaptojanin 1 isoform a [Homo sapiens]
          Length = 1612

 Score = 35.4 bits (80), Expect = 0.041
 Identities = 53/189 (28%), Positives = 69/189 (36%), Gaps = 31/189 (16%)

Query: 39   PPPPRVSSPPA-PLPSR---DRCGRRRLRGTWSGRLALGKRPTVG-ARRSPGA--GPGRR 91
            PPPPR  +PP  P P +      G R    T      +G  P+ G ARR   A   PG  
Sbjct: 1147 PPPPRPVAPPTRPAPPQRPPPPSGARSPAPTRKEFGGIGAPPSPGVARREMEAPKSPGTT 1206

Query: 92   MDENHERCGPGVEFVAVVASGPRWRDQGLVRQVLVGAEG-LPASQAGRRGTA-------L 143
              +N  R  P  +      +GP        R  +    G + A Q+  R +A        
Sbjct: 1207 RKDNIGRSQPSPQ---AGLAGPGPAGYSTARPTIPPRAGVISAPQSHARASAGRLTPESQ 1263

Query: 144  VSVAVGSRGRVFL-------VARPCLRFLPQP------PLCGLPGALALAVPGPCLSAPP 190
               +  S+G  FL        A P    LP P      PL  +   +  + P P L  PP
Sbjct: 1264 SKTSETSKGSTFLPEPLKPQAAFPPQSSLPPPAQRLQEPLVPVAAPMPQSGPQPNLETPP 1323

Query: 191  SPPAARRSS 199
             PP   RSS
Sbjct: 1324 QPPPRSRSS 1332


>gi|237757308 synaptojanin 1 isoform b [Homo sapiens]
          Length = 1350

 Score = 35.4 bits (80), Expect = 0.041
 Identities = 53/189 (28%), Positives = 69/189 (36%), Gaps = 31/189 (16%)

Query: 39   PPPPRVSSPPA-PLPSR---DRCGRRRLRGTWSGRLALGKRPTVG-ARRSPGA--GPGRR 91
            PPPPR  +PP  P P +      G R    T      +G  P+ G ARR   A   PG  
Sbjct: 1147 PPPPRPVAPPTRPAPPQRPPPPSGARSPAPTRKEFGGIGAPPSPGVARREMEAPKSPGTT 1206

Query: 92   MDENHERCGPGVEFVAVVASGPRWRDQGLVRQVLVGAEG-LPASQAGRRGTA-------L 143
              +N  R  P  +      +GP        R  +    G + A Q+  R +A        
Sbjct: 1207 RKDNIGRSQPSPQ---AGLAGPGPAGYSTARPTIPPRAGVISAPQSHARASAGRLTPESQ 1263

Query: 144  VSVAVGSRGRVFL-------VARPCLRFLPQP------PLCGLPGALALAVPGPCLSAPP 190
               +  S+G  FL        A P    LP P      PL  +   +  + P P L  PP
Sbjct: 1264 SKTSETSKGSTFLPEPLKPQAAFPPQSSLPPPAQRLQEPLVPVAAPMPQSGPQPNLETPP 1323

Query: 191  SPPAARRSS 199
             PP   RSS
Sbjct: 1324 QPPPRSRSS 1332


>gi|148539870 histone deacetylase 7 isoform d [Homo sapiens]
          Length = 954

 Score = 35.4 bits (80), Expect = 0.041
 Identities = 34/125 (27%), Positives = 52/125 (41%), Gaps = 19/125 (15%)

Query: 34  RPASDPPPPRVSSPPAPLPSRDRCGRRRLRGTWSGRLA-------LGKRPTVGARRSPGA 86
           R  S+P PP  ++PP P P + R  + +       R A       L + P+     + G 
Sbjct: 357 RTRSEPLPPSATAPPPPGPMQPRLEQLKTHVQVIKRSAKPSEKPRLRQIPSAEDLETDGG 416

Query: 87  GPGRRMDE--NHERCG---PGVEFVAVVASGPR---WRDQGLVRQVLVGAEG----LPAS 134
           GPG+ +D+   H   G   P     A +   P+   W  Q L  ++  G+ G    LP +
Sbjct: 417 GPGQVVDDGLEHRELGHGQPEARGPAPLQQHPQVLLWEQQRLAGRLPRGSTGDTVLLPLA 476

Query: 135 QAGRR 139
           Q G R
Sbjct: 477 QGGHR 481


>gi|169234807 histone deacetylase 7 isoform a [Homo sapiens]
          Length = 991

 Score = 35.4 bits (80), Expect = 0.041
 Identities = 34/125 (27%), Positives = 52/125 (41%), Gaps = 19/125 (15%)

Query: 34  RPASDPPPPRVSSPPAPLPSRDRCGRRRLRGTWSGRLA-------LGKRPTVGARRSPGA 86
           R  S+P PP  ++PP P P + R  + +       R A       L + P+     + G 
Sbjct: 394 RTRSEPLPPSATAPPPPGPMQPRLEQLKTHVQVIKRSAKPSEKPRLRQIPSAEDLETDGG 453

Query: 87  GPGRRMDE--NHERCG---PGVEFVAVVASGPR---WRDQGLVRQVLVGAEG----LPAS 134
           GPG+ +D+   H   G   P     A +   P+   W  Q L  ++  G+ G    LP +
Sbjct: 454 GPGQVVDDGLEHRELGHGQPEARGPAPLQQHPQVLLWEQQRLAGRLPRGSTGDTVLLPLA 513

Query: 135 QAGRR 139
           Q G R
Sbjct: 514 QGGHR 518


>gi|239757414 PREDICTED: hypothetical protein XP_002345432 [Homo
           sapiens]
          Length = 176

 Score = 34.7 bits (78), Expect = 0.069
 Identities = 45/133 (33%), Positives = 54/133 (40%), Gaps = 12/133 (9%)

Query: 24  DSERWLRAAFRPASDPPP---PRVSSPPAPLPSRDRCGRRRLRGTWSGRLALGKRPTVGA 80
           D+ R   AA R A+ P P   P   + PA   S  +  RRR RGT     AL       +
Sbjct: 42  DAARVDAAALRAAARPGPLGRPPTRAGPAQRSSCTQPHRRRRRGTRRLPPALTPAGPYHS 101

Query: 81  RRSPGAGPGRRMDENHERCGPGVEFVAVVASGPRWRDQGLVRQVLVGAEGLPASQAGRRG 140
            R  G GP     +   R  P    V     GP+  D G  RQV   + G   +QA  RG
Sbjct: 102 ARPGGGGP----CQGSARFSPDPAAVRPQPRGPQ-PDSGSARQVPPDSRG---AQALHRG 153

Query: 141 TALVSVAV-GSRG 152
             L S A  G RG
Sbjct: 154 APLASPAPRGVRG 166


>gi|224465238 hypothetical protein LOC283999 [Homo sapiens]
          Length = 394

 Score = 34.3 bits (77), Expect = 0.090
 Identities = 47/163 (28%), Positives = 64/163 (39%), Gaps = 23/163 (14%)

Query: 34  RPASDPPPPRVSSPPAPLPSRDRCGRRRLRGTWSGRLALGKRPTVGARRSPGAGPGRRMD 93
           R  +DPP    SS     P+R      ++   W  R + G R      + PGA P  R D
Sbjct: 43  RSLADPPS---SSQALHSPAR------QVHLVWLLR-SRGFREIKERAQGPGASPWGRWD 92

Query: 94  ENHERCGPGVEFVAVVASGPRWRDQGLVRQVLVGAEGLPASQAGRRGTALVSVAVGSRGR 153
            +     P   F A +++   +  QG  ++   G   LPA+  G RG        G  G 
Sbjct: 93  WS-----PSPRFAARLSTSSPF-PQGRAQRPQRGGVDLPATPGGPRGQC-----AGRSGD 141

Query: 154 VFLVARPCLRFLPQPPLCGLPGALALAVPGPCLSAPPSPPAAR 196
           V  + R   R    PP+  LP   A   P    +  PSPPA R
Sbjct: 142 V--LRRAGRRRARPPPVPRLPAPRAPRRPRGPATPDPSPPAGR 182



 Score = 30.4 bits (67), Expect = 1.3
 Identities = 32/90 (35%), Positives = 41/90 (45%), Gaps = 9/90 (10%)

Query: 11  PAGPSVLAGWDAADSERWLRAAFRPASDPPP-PRVSSPPAPLPSRDRC------GRRRLR 63
           PA P    G  A  S   LR A R  + PPP PR+ +P AP   R            R  
Sbjct: 125 PATPGGPRGQCAGRSGDVLRRAGRRRARPPPVPRLPAPRAPRRPRGPATPDPSPPAGRPH 184

Query: 64  GTWSGRLALGKRPTVGAR-RSPGAGPGRRM 92
           G  +GR A G+RP   A+ R+PG    +R+
Sbjct: 185 GP-AGRAAPGRRPGCTAQLRAPGRRGRQRL 213


>gi|89363017 alpha 2 type V collagen preproprotein [Homo sapiens]
          Length = 1499

 Score = 34.3 bits (77), Expect = 0.090
 Identities = 49/198 (24%), Positives = 70/198 (35%), Gaps = 21/198 (10%)

Query: 13  GPSVLAGWDAADSERWLRAAFRPASDPPPPRVSSPPAPLPSRDRCGRRRLRGTWSGRLAL 72
           GP  + G          +    P  +P P  +  P  P     + G R   GT      +
Sbjct: 459 GPQGIRGQPGDPGVPGFKGEAGPKGEPGPHGIQGPIGPPGEEGKRGPRGDPGTVGPPGPV 518

Query: 73  GKRPTVGARRSPGAG--PGRRMDENHERCGPGVEFVAVVASGPRWRDQGLVRQVLVGAEG 130
           G+R   G R  PG+   PG +  +     GP      V +SGP+       R    G  G
Sbjct: 519 GERGAPGNRGFPGSDGLPGPKGAQGER--GP------VGSSGPKGSQGDPGRP---GEPG 567

Query: 131 LPASQAGRRGTALVSVAVGSRGRVFLVARPCLRFLPQPP----LCGLPGALALAVPGPCL 186
           LP    G RG        G  G++  +  P     P PP    + G PG++ L  P    
Sbjct: 568 LP----GARGLTGNPGVQGPEGKLGPLGAPGEDGRPGPPGSIGIRGQPGSMGLPGPKGSS 623

Query: 187 SAPPSPPAARRSSLLPER 204
             P  P  A  + +  +R
Sbjct: 624 GDPGKPGEAGNAGVPGQR 641



 Score = 28.9 bits (63), Expect = 3.8
 Identities = 52/192 (27%), Positives = 67/192 (34%), Gaps = 28/192 (14%)

Query: 11   PAGPSVLAGWDAADSERWLRAAFRPASDPPPPRVSSPPAPLPSRDRCGRRRLRGTWSGRL 70
            PAG     G D A  ER  R    PA  P        P P+ +    G+   RG    R 
Sbjct: 1051 PAGNDGTPGRDGAVGERGDRGDPGPAGLPGSQGAPGTPGPVGAPGDAGQ---RGDPGSRG 1107

Query: 71   ALGKRPTVGARRSPG-AGPGRRMDENHERCGPGVEFVAVVASGPRWRDQGLVRQVLVGAE 129
             +G     G R  PG  GP     ++ +R   G         G R            G +
Sbjct: 1108 PIGPPGRAGKRGLPGPQGPRGDKGDHGDRGDRG-------QKGHRG---------FTGLQ 1151

Query: 130  GLPASQA--GRRGTALVSVAVGSRGRVFLVARPCLRFLPQP--PL--CGLPGALALAVP- 182
            GLP      G +G+A +    G RG    V        P P  P+   G+ G++  A P 
Sbjct: 1152 GLPGPPGPNGEQGSAGIPGPFGPRGPPGPVGPSGKEGNPGPLGPIGPPGVRGSVGEAGPE 1211

Query: 183  -GPCLSAPPSPP 193
              P    PP PP
Sbjct: 1212 GPPGEPGPPGPP 1223


>gi|239755634 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 449

 Score = 34.3 bits (77), Expect = 0.090
 Identities = 55/207 (26%), Positives = 71/207 (34%), Gaps = 44/207 (21%)

Query: 2   VALHKGRIPPAGPSVLAGWDAADSERWLRAAFRPASDPPPPRVSSPPAPLPSRDRCGRRR 61
           +++  G+ P AGPS               A+   A   PP RV + P+   SR    +RR
Sbjct: 108 ISVTLGQAPRAGPSA--------------ASSAAAGKTPPSRVPAEPS---SRRGASKRR 150

Query: 62  LRGTWSGRLALGKRPTVGARRSPGAG--------PGRRMDENHE--RCGPGVEFVAVVAS 111
                 G      R   GA R P A         P   +   HE  R  PGV   + ++ 
Sbjct: 151 ESWRTDGERLRSGRGCAGAARGPDASLDTRREGWPRAAVVGRHEARRLKPGVSVSSSLSP 210

Query: 112 GPRWRDQGLVRQVLVGAEGLPASQAGRRGTALVSVAVGSRGRVFLVARPCLRFLPQ-PPL 170
           GP  +    + + L  A     S A   G                  RP  RFL +    
Sbjct: 211 GPPLQRSSSLNETLRSAAAHAESSARECGKR--------------TQRPEQRFLCRGSSF 256

Query: 171 CG-LPGALALAVPGPCLSAPPSP-PAA 195
           CG  P  L    P P    PP P PAA
Sbjct: 257 CGHRPQRLHPGRPLPPQRRPPGPAPAA 283


>gi|239744429 PREDICTED: hypothetical protein XP_002343157 [Homo
           sapiens]
          Length = 449

 Score = 34.3 bits (77), Expect = 0.090
 Identities = 55/207 (26%), Positives = 71/207 (34%), Gaps = 44/207 (21%)

Query: 2   VALHKGRIPPAGPSVLAGWDAADSERWLRAAFRPASDPPPPRVSSPPAPLPSRDRCGRRR 61
           +++  G+ P AGPS               A+   A   PP RV + P+   SR    +RR
Sbjct: 108 ISVTLGQAPRAGPSA--------------ASSAAAGKTPPSRVPAEPS---SRRGASKRR 150

Query: 62  LRGTWSGRLALGKRPTVGARRSPGAG--------PGRRMDENHE--RCGPGVEFVAVVAS 111
                 G      R   GA R P A         P   +   HE  R  PGV   + ++ 
Sbjct: 151 ESWRTDGERLRSGRGCAGAARGPDASLDTRREGWPRAAVVGRHEARRLKPGVSVSSSLSP 210

Query: 112 GPRWRDQGLVRQVLVGAEGLPASQAGRRGTALVSVAVGSRGRVFLVARPCLRFLPQ-PPL 170
           GP  +    + + L  A     S A   G                  RP  RFL +    
Sbjct: 211 GPPLQRSSSLNETLRSAAAHAESSARECGKR--------------TQRPEQRFLCRGSSF 256

Query: 171 CG-LPGALALAVPGPCLSAPPSP-PAA 195
           CG  P  L    P P    PP P PAA
Sbjct: 257 CGHRPQRLHPGRPLPPQRRPPGPAPAA 283


>gi|114431216 tumor protein p53 inducible protein 13 [Homo sapiens]
          Length = 393

 Score = 34.3 bits (77), Expect = 0.090
 Identities = 22/51 (43%), Positives = 24/51 (47%), Gaps = 6/51 (11%)

Query: 39  PPPPRVSSPPAPLPSRDRCGRRRLRGTWSGRLALGKRPTVGARRSPGAGPG 89
           PP   V+S     PS     RRRLR       ALG +PT  A R P A PG
Sbjct: 184 PPGTEVTSQGPRQPSSSGAKRRRLRA------ALGPQPTRSALRFPSASPG 228


>gi|13994287 BTE-binding protein 4 [Homo sapiens]
          Length = 252

 Score = 33.9 bits (76), Expect = 0.12
 Identities = 16/44 (36%), Positives = 20/44 (45%)

Query: 4  LHKGRIPPAGPSVLAGWDAADSERWLRAAFRPASDPPPPRVSSP 47
          +H+GR  P G    AG D   + R   +   P   PPPP  S P
Sbjct: 25 VHRGRPGPEGAGPAAGLDVRAARREAASPGTPGPPPPPPAASGP 68


>gi|239752764 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 370

 Score = 33.9 bits (76), Expect = 0.12
 Identities = 56/191 (29%), Positives = 65/191 (34%), Gaps = 51/191 (26%)

Query: 58  GRRRL-----RGTWSGRLALGKRPTVGARRSPGAGPGRRMDENHERCGPGVEFVAVVASG 112
           GRRR      RG   G  ALG       RR     PG R      + G      A +  G
Sbjct: 72  GRRRACPGRGRGGLPGAAALGAGAQQPRRRRLAQPPGSRAPL---QVGGAPRRRAHLTGG 128

Query: 113 PRWRDQGLVRQVLVGAEGLPASQAGRRGTALVSVAVGSRGRVFLVARPCLRFLPQPPLCG 172
           P  R        L  A GLPAS+A      L   +  +R R+ L +    R LP  P  G
Sbjct: 129 PPRRRPPR----LAAAHGLPASEA----PGLRPDSARTRLRLRLASARLPRGLPPAPAAG 180

Query: 173 L--------------------------PG--------ALALAVPGPCLSAPPSPPAARRS 198
           L                          PG        +L    P PCL  PP+PPAAR  
Sbjct: 181 LWRAGCTRLRPLLLQPPPMLSPGLAQSPGVELHARTLSLPAPSPAPCLP-PPAPPAARTP 239

Query: 199 SLLPERLTGFT 209
           S      T FT
Sbjct: 240 SAHSPAHTHFT 250


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.320    0.139    0.450 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,520,258
Number of Sequences: 37866
Number of extensions: 772675
Number of successful extensions: 7687
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 77
Number of HSP's successfully gapped in prelim test: 312
Number of HSP's that attempted gapping in prelim test: 6916
Number of HSP's gapped (non-prelim): 1081
length of query: 228
length of database: 18,247,518
effective HSP length: 99
effective length of query: 129
effective length of database: 14,498,784
effective search space: 1870343136
effective search space used: 1870343136
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 60 (27.7 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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