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Search of human proteins with 85797660
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|85797660 limkain b1 [Homo sapiens]
(1742 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|85797660 limkain b1 [Homo sapiens] 3513 0.0
gi|56549696 E1A binding protein p400 [Homo sapiens] 43 0.003
gi|83367077 mucin 16 [Homo sapiens] 37 0.22
gi|119372317 xin actin-binding repeat containing 2 isoform 1 [Ho... 37 0.22
gi|22035679 AT rich interactive domain 4B isoform 2 [Homo sapiens] 37 0.22
gi|22035677 AT rich interactive domain 4B isoform 1 [Homo sapiens] 37 0.22
gi|194733742 Wolf-Hirschhorn syndrome candidate 2 protein [Homo ... 36 0.29
gi|217416362 zinc finger CCCH-type containing 8 [Homo sapiens] 36 0.29
gi|58530876 melanoma antigen family C, 1 [Homo sapiens] 36 0.37
gi|148368962 NKF3 kinase family member [Homo sapiens] 36 0.37
gi|33286436 gametogenetin [Homo sapiens] 36 0.37
gi|157384971 cyclin G associated kinase [Homo sapiens] 35 0.49
gi|71274111 v-maf musculoaponeurotic fibrosarcoma oncogene homol... 35 0.64
gi|42544123 splicing factor 1 isoform 3 [Homo sapiens] 35 0.83
gi|42544125 splicing factor 1 isoform 2 [Homo sapiens] 35 0.83
gi|42544130 splicing factor 1 isoform 1 [Homo sapiens] 35 0.83
gi|62241003 cardiomyopathy associated 5 [Homo sapiens] 35 0.83
gi|157738649 neurofilament, medium polypeptide 150kDa isoform 1 ... 34 1.1
gi|157738641 neurofilament, medium polypeptide 150kDa isoform 2 ... 34 1.1
gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens] 34 1.1
gi|194018562 histamine receptor H3 [Homo sapiens] 34 1.4
gi|32483416 neurofilament, heavy polypeptide 200kDa [Homo sapiens] 34 1.4
gi|72256200 B-cell CLL/lymphoma 9 [Homo sapiens] 34 1.4
gi|148886692 FAT tumor suppressor homolog 3 [Homo sapiens] 34 1.4
gi|5453936 POU class 3 homeobox 3 [Homo sapiens] 34 1.4
gi|5031923 meiotic recombination 11 homolog A isoform 1 [Homo sa... 33 1.9
gi|7657387 CCR4-NOT transcription complex, subunit 3 [Homo sapiens] 33 1.9
gi|122937492 SET domain containing 5 [Homo sapiens] 33 1.9
gi|222352122 hypothetical protein LOC284297 [Homo sapiens] 33 2.4
gi|67514036 SH3-domain kinase binding protein 1 isoform b [Homo ... 33 2.4
>gi|85797660 limkain b1 [Homo sapiens]
Length = 1742
Score = 3513 bits (9109), Expect = 0.0
Identities = 1742/1742 (100%), Positives = 1742/1742 (100%)
Query: 1 MMEGNGTENSCSRTRGWLQQDNDAKPWLWKFSNCFSRPEQTLPHSPQTKEYMENKKVAVE 60
MMEGNGTENSCSRTRGWLQQDNDAKPWLWKFSNCFSRPEQTLPHSPQTKEYMENKKVAVE
Sbjct: 1 MMEGNGTENSCSRTRGWLQQDNDAKPWLWKFSNCFSRPEQTLPHSPQTKEYMENKKVAVE 60
Query: 61 LKDVPSPLHAGSKLFPAVPLPDIRSLQQPKIQLSSVPKVSCCAHCPNEPSTSPMRFGGGG 120
LKDVPSPLHAGSKLFPAVPLPDIRSLQQPKIQLSSVPKVSCCAHCPNEPSTSPMRFGGGG
Sbjct: 61 LKDVPSPLHAGSKLFPAVPLPDIRSLQQPKIQLSSVPKVSCCAHCPNEPSTSPMRFGGGG 120
Query: 121 GGSGGTSSLIHPGALLDSQSTRTITCQVGSGFAFQSASSLQNASARNNLAGIASDFPSMC 180
GGSGGTSSLIHPGALLDSQSTRTITCQVGSGFAFQSASSLQNASARNNLAGIASDFPSMC
Sbjct: 121 GGSGGTSSLIHPGALLDSQSTRTITCQVGSGFAFQSASSLQNASARNNLAGIASDFPSMC 180
Query: 181 LESNLSSCKHLPCCGKLHFQSCHGNVHKLHQFPSLQGCTSAGYFPCSDFTSGAPGHLEEH 240
LESNLSSCKHLPCCGKLHFQSCHGNVHKLHQFPSLQGCTSAGYFPCSDFTSGAPGHLEEH
Sbjct: 181 LESNLSSCKHLPCCGKLHFQSCHGNVHKLHQFPSLQGCTSAGYFPCSDFTSGAPGHLEEH 240
Query: 241 ISQSELTPHLCTNSLHLNVVPPVCLKGSLYCEDCLNKPARNSIIDAAKVWPNIPPPNTQP 300
ISQSELTPHLCTNSLHLNVVPPVCLKGSLYCEDCLNKPARNSIIDAAKVWPNIPPPNTQP
Sbjct: 241 ISQSELTPHLCTNSLHLNVVPPVCLKGSLYCEDCLNKPARNSIIDAAKVWPNIPPPNTQP 300
Query: 301 APLAVPLCNGCGTKGTGKETTLLLATSLGKAASKFGSPEVAVAGQVLENLPPIGVFWDIE 360
APLAVPLCNGCGTKGTGKETTLLLATSLGKAASKFGSPEVAVAGQVLENLPPIGVFWDIE
Sbjct: 301 APLAVPLCNGCGTKGTGKETTLLLATSLGKAASKFGSPEVAVAGQVLENLPPIGVFWDIE 360
Query: 361 NCSVPSGRSATAVVQRIREKFFKGHREAEFICVCDISKENKEVIQELNNCQVTVAHINAT 420
NCSVPSGRSATAVVQRIREKFFKGHREAEFICVCDISKENKEVIQELNNCQVTVAHINAT
Sbjct: 361 NCSVPSGRSATAVVQRIREKFFKGHREAEFICVCDISKENKEVIQELNNCQVTVAHINAT 420
Query: 421 AKNAADDKLRQSLRRFANTHTAPATVVLVSTDVNFALELSDLRHRHGFHIILVHKNQASE 480
AKNAADDKLRQSLRRFANTHTAPATVVLVSTDVNFALELSDLRHRHGFHIILVHKNQASE
Sbjct: 421 AKNAADDKLRQSLRRFANTHTAPATVVLVSTDVNFALELSDLRHRHGFHIILVHKNQASE 480
Query: 481 ALLHHANELIRFEEFISDLPPRLPLKMPQCHTLLYVYNLPANKDGKSVSNRLRRLSDNCG 540
ALLHHANELIRFEEFISDLPPRLPLKMPQCHTLLYVYNLPANKDGKSVSNRLRRLSDNCG
Sbjct: 481 ALLHHANELIRFEEFISDLPPRLPLKMPQCHTLLYVYNLPANKDGKSVSNRLRRLSDNCG 540
Query: 541 GKVLSITGCSAILRFINQDSAERAQKRMENEDVFGNRIIVSFTPKNRELCETKSSNAIAD 600
GKVLSITGCSAILRFINQDSAERAQKRMENEDVFGNRIIVSFTPKNRELCETKSSNAIAD
Sbjct: 541 GKVLSITGCSAILRFINQDSAERAQKRMENEDVFGNRIIVSFTPKNRELCETKSSNAIAD 600
Query: 601 KVKSPKKLKNPKLCLIKDASEQSSSAKATPGKGSQANSGSATKNTNVKSLQELCRMESKT 660
KVKSPKKLKNPKLCLIKDASEQSSSAKATPGKGSQANSGSATKNTNVKSLQELCRMESKT
Sbjct: 601 KVKSPKKLKNPKLCLIKDASEQSSSAKATPGKGSQANSGSATKNTNVKSLQELCRMESKT 660
Query: 661 GHRNSEHQQGHLRLVVPTHGNSSAAVSTPKNSGVAEPVYKTSQKKENLSARSVTSSPVEK 720
GHRNSEHQQGHLRLVVPTHGNSSAAVSTPKNSGVAEPVYKTSQKKENLSARSVTSSPVEK
Sbjct: 661 GHRNSEHQQGHLRLVVPTHGNSSAAVSTPKNSGVAEPVYKTSQKKENLSARSVTSSPVEK 720
Query: 721 KDKEETVFQVSYPSAFSKLVASRQVSPLLASQSWSSRSMSPNLLNRASPLAFNIANSSSE 780
KDKEETVFQVSYPSAFSKLVASRQVSPLLASQSWSSRSMSPNLLNRASPLAFNIANSSSE
Sbjct: 721 KDKEETVFQVSYPSAFSKLVASRQVSPLLASQSWSSRSMSPNLLNRASPLAFNIANSSSE 780
Query: 781 ADCPDPFANGADVQVSNIDYRLSRKELQQLLQEAFARHGKVKSVELSPHTDYQLKAVVQM 840
ADCPDPFANGADVQVSNIDYRLSRKELQQLLQEAFARHGKVKSVELSPHTDYQLKAVVQM
Sbjct: 781 ADCPDPFANGADVQVSNIDYRLSRKELQQLLQEAFARHGKVKSVELSPHTDYQLKAVVQM 840
Query: 841 ENLQDAIGAVNSLHRYKIGSKKILVSLATGAASKSLSLLSAETMSVLQDAPACCLPLFKF 900
ENLQDAIGAVNSLHRYKIGSKKILVSLATGAASKSLSLLSAETMSVLQDAPACCLPLFKF
Sbjct: 841 ENLQDAIGAVNSLHRYKIGSKKILVSLATGAASKSLSLLSAETMSVLQDAPACCLPLFKF 900
Query: 901 TDIYEKKFGHKLNVSDLYKLTDTVAIREQGNGRLVCLLPSSQARQSPLGSSQSHDGSSTN 960
TDIYEKKFGHKLNVSDLYKLTDTVAIREQGNGRLVCLLPSSQARQSPLGSSQSHDGSSTN
Sbjct: 901 TDIYEKKFGHKLNVSDLYKLTDTVAIREQGNGRLVCLLPSSQARQSPLGSSQSHDGSSTN 960
Query: 961 CSPIIFEELEYHEPVCRQHCSNKDFSEHEFDPDSYKIPFVILSLKTFAPQVHSLLQTHEG 1020
CSPIIFEELEYHEPVCRQHCSNKDFSEHEFDPDSYKIPFVILSLKTFAPQVHSLLQTHEG
Sbjct: 961 CSPIIFEELEYHEPVCRQHCSNKDFSEHEFDPDSYKIPFVILSLKTFAPQVHSLLQTHEG 1020
Query: 1021 TVPLLSFPDCYIAEFGDLEVVQENQGGVPLEHFITCVPGVNIATAQNGIKVVKWIHNKPP 1080
TVPLLSFPDCYIAEFGDLEVVQENQGGVPLEHFITCVPGVNIATAQNGIKVVKWIHNKPP
Sbjct: 1021 TVPLLSFPDCYIAEFGDLEVVQENQGGVPLEHFITCVPGVNIATAQNGIKVVKWIHNKPP 1080
Query: 1081 PPNTDPWLLRSKSPVGNPQLIQFSREVIDLLKSQPSCVIPISHFIPSYHHHFAKQCRVSD 1140
PPNTDPWLLRSKSPVGNPQLIQFSREVIDLLKSQPSCVIPISHFIPSYHHHFAKQCRVSD
Sbjct: 1081 PPNTDPWLLRSKSPVGNPQLIQFSREVIDLLKSQPSCVIPISHFIPSYHHHFAKQCRVSD 1140
Query: 1141 YGYSKLIELLEAVPHVLQILGMGSKRLLTLTHRAQVKRFTQDLLKLLKSQASKQVIVREF 1200
YGYSKLIELLEAVPHVLQILGMGSKRLLTLTHRAQVKRFTQDLLKLLKSQASKQVIVREF
Sbjct: 1141 YGYSKLIELLEAVPHVLQILGMGSKRLLTLTHRAQVKRFTQDLLKLLKSQASKQVIVREF 1200
Query: 1201 SQAYHWCFSKDWDVTEYGVCELIDIVSEIPDTTICLSQQDNEMVICIPKRERTQDEIERT 1260
SQAYHWCFSKDWDVTEYGVCELIDIVSEIPDTTICLSQQDNEMVICIPKRERTQDEIERT
Sbjct: 1201 SQAYHWCFSKDWDVTEYGVCELIDIVSEIPDTTICLSQQDNEMVICIPKRERTQDEIERT 1260
Query: 1261 KQFSKDVVDLLRHQPHFRMPFNKFIPSYHHHFGRQCKLAYYGFTKLLELFEAIPDTLQVL 1320
KQFSKDVVDLLRHQPHFRMPFNKFIPSYHHHFGRQCKLAYYGFTKLLELFEAIPDTLQVL
Sbjct: 1261 KQFSKDVVDLLRHQPHFRMPFNKFIPSYHHHFGRQCKLAYYGFTKLLELFEAIPDTLQVL 1320
Query: 1321 ECGEEKILTLTEVERFKALAAQFVKLLRSQKDNCLMMTDLLTEYAKTFGYTFRLQDYDVS 1380
ECGEEKILTLTEVERFKALAAQFVKLLRSQKDNCLMMTDLLTEYAKTFGYTFRLQDYDVS
Sbjct: 1321 ECGEEKILTLTEVERFKALAAQFVKLLRSQKDNCLMMTDLLTEYAKTFGYTFRLQDYDVS 1380
Query: 1381 SISALTQKLCHVVKVADIESGRQIQLINRKSLRSLTAQLLVLLMSWEGTTHLSVEELKRH 1440
SISALTQKLCHVVKVADIESGRQIQLINRKSLRSLTAQLLVLLMSWEGTTHLSVEELKRH
Sbjct: 1381 SISALTQKLCHVVKVADIESGRQIQLINRKSLRSLTAQLLVLLMSWEGTTHLSVEELKRH 1440
Query: 1441 YESTHNTPLNPCEYGFMTLTELLKSLPYLVEVFTNDKMEECVKLTSLYLFAKNVRSLLHT 1500
YESTHNTPLNPCEYGFMTLTELLKSLPYLVEVFTNDKMEECVKLTSLYLFAKNVRSLLHT
Sbjct: 1441 YESTHNTPLNPCEYGFMTLTELLKSLPYLVEVFTNDKMEECVKLTSLYLFAKNVRSLLHT 1500
Query: 1501 YHYQQIFLHEFSMAYTKYVGETLQPKTYGHSSVEELLGAIPQVVWIKGHGHKRIVVLKND 1560
YHYQQIFLHEFSMAYTKYVGETLQPKTYGHSSVEELLGAIPQVVWIKGHGHKRIVVLKND
Sbjct: 1501 YHYQQIFLHEFSMAYTKYVGETLQPKTYGHSSVEELLGAIPQVVWIKGHGHKRIVVLKND 1560
Query: 1561 MKSRLSSLSLSPANHENQPSEGERILEVPESHTASELKLGADGSGPSHTEQELLRLTDDS 1620
MKSRLSSLSLSPANHENQPSEGERILEVPESHTASELKLGADGSGPSHTEQELLRLTDDS
Sbjct: 1561 MKSRLSSLSLSPANHENQPSEGERILEVPESHTASELKLGADGSGPSHTEQELLRLTDDS 1620
Query: 1621 PVDLLCAPVPSCLPSPQLRPDPVILQSADLIQFEERPQEPSEIMILNQEEKMEIPIPGKS 1680
PVDLLCAPVPSCLPSPQLRPDPVILQSADLIQFEERPQEPSEIMILNQEEKMEIPIPGKS
Sbjct: 1621 PVDLLCAPVPSCLPSPQLRPDPVILQSADLIQFEERPQEPSEIMILNQEEKMEIPIPGKS 1680
Query: 1681 KTLTSDSSSSCISAAVPVPPCPSSETSESLLSKDPVESPAKKQPKNRVKLAANFSLAPIT 1740
KTLTSDSSSSCISAAVPVPPCPSSETSESLLSKDPVESPAKKQPKNRVKLAANFSLAPIT
Sbjct: 1681 KTLTSDSSSSCISAAVPVPPCPSSETSESLLSKDPVESPAKKQPKNRVKLAANFSLAPIT 1740
Query: 1741 KL 1742
KL
Sbjct: 1741 KL 1742
>gi|56549696 E1A binding protein p400 [Homo sapiens]
Length = 3122
Score = 42.7 bits (99), Expect = 0.003
Identities = 30/96 (31%), Positives = 42/96 (43%), Gaps = 19/96 (19%)
Query: 1657 PQEPSEIMILNQEEKMEIPIPGKSKTLTSDSSS------SCISAAVPVPPCPSSETSESL 1710
P +P+++ + +P PGK + S SS S P PPCP + S
Sbjct: 614 PSQPAQLAL-------HVPTPGKVQVQASQLSSLPQMVASTRLPVDPAPPCPRPLPTSST 666
Query: 1711 LSKDPVE------SPAKKQPKNRVKLAANFSLAPIT 1740
S PV SPA+ P NR A N +L+P+T
Sbjct: 667 SSLAPVSGSGPGPSPARSSPVNRPSSATNKALSPVT 702
>gi|83367077 mucin 16 [Homo sapiens]
Length = 14507
Score = 36.6 bits (83), Expect = 0.22
Identities = 48/175 (27%), Positives = 74/175 (42%), Gaps = 25/175 (14%)
Query: 618 DASEQSSSAKATPGKGSQANSGSATKNTNVKSLQELCRMESKTGHRNSEHQQGHLRLVVP 677
DAS SSS +P K +A ++TK + S Q E+ G S GH VP
Sbjct: 2921 DASTASSSLSKSPEKNPRARMMTSTKAISASSFQSTGFTETPEGSA-SPSMAGH-EPRVP 2978
Query: 678 THGN-----SSAAVSTPKNSGVAEPVYKTSQKKE-------NLSARS-VTSSPVEKKDKE 724
T G +S ++S P S + + TS + +ARS +SSP+ ++
Sbjct: 2979 TSGTGDPRYASESMSYPDPSKASSAMTSTSLASKLTTLFSTGQAARSGSSSSPISLSTEK 3038
Query: 725 ETVFQVSYPSAFSKLVASRQVSPLLASQSWSSRSMSPNLLNRASPLAFNIANSSS 779
ET F P+A + S + P +A Q PN+L A ++ +S+
Sbjct: 3039 ETSF--LSPTASTSRKTSLFLGPSMARQ--------PNILVHLQTSALTLSPTST 3083
>gi|119372317 xin actin-binding repeat containing 2 isoform 1 [Homo
sapiens]
Length = 3549
Score = 36.6 bits (83), Expect = 0.22
Identities = 50/250 (20%), Positives = 100/250 (40%), Gaps = 51/250 (20%)
Query: 546 ITGCSAILRFINQDSAERAQKRMENEDVFGNRIIVSFTPKNRELCETKSSNAIAD--KVK 603
+T ++ + ++RA + ++ +DVF + T ++ E ++ + + +K
Sbjct: 2083 LTSTVSVKNNLTTKESDRAVRELKKDDVFNSIQSAGKTVGKQQTYELRNDHQKMEGFHIK 2142
Query: 604 SPKKLKNPKLCLIKDASEQSSSAK--ATPGKGSQANSGSATKNTNVKSLQELCRMESKTG 661
SPKK KN K+ +S+ S + + P G+ SG K T +K +T
Sbjct: 2143 SPKKTKNIKILTDTQSSKPSPTQHPVSMPVGGTYDLSGDFQKQTLLK---------QETK 2193
Query: 662 HRNSEHQQGHLRLVVPTHGNSSAAVSTPKNSGVAEPVYKTSQKKENLSARSVTSSPVEKK 721
+ N + ++ ++ L +P+++ L TS+ E K
Sbjct: 2194 YSNKDIKKKNINL---------------------QPMWQL------LPVEQDTSNVTEMK 2226
Query: 722 DKEETVFQVSYPSAFSKLVASRQVSPLLASQSWSSRSMSPNLLNRA-----SPLAFNIAN 776
E++ + F R+ L SQ + ++ + L A +P+ FN N
Sbjct: 2227 VSEKS------HNTFKATNKKRETDVHLKSQDFLMKTNTSTGLKMAMERSLNPINFNPEN 2280
Query: 777 SSSEADCPDP 786
+ E++CP P
Sbjct: 2281 NVKESECPLP 2290
>gi|22035679 AT rich interactive domain 4B isoform 2 [Homo sapiens]
Length = 1226
Score = 36.6 bits (83), Expect = 0.22
Identities = 74/312 (23%), Positives = 122/312 (39%), Gaps = 46/312 (14%)
Query: 585 KNRE-LCETKSSNAIADKVKSPKKLKNPKLCLIKDASEQSSSAKAT---PGKGSQANSGS 640
KN+E LC SSN+ +D+ + K K E+ S + T G A
Sbjct: 761 KNKESLCMENSSNSSSDEDEEETKAKMTPTKKYNGLEEKRKSLRTTGFYSGFSEVAEKRI 820
Query: 641 ATKNTNVKSLQELCRMESKTGHRNSEHQQGHLRLVVPTHGNSSAAVSTPKN----SGVAE 696
N + + LQ + K + + Q L + + A ++P + GVAE
Sbjct: 821 KLLNNSDERLQNSRAKDRKDVWSSIQGQWPKKTLKELFSDSDTEAAASPPHPAPEEGVAE 880
Query: 697 PVYKTSQKKENLSAR---------SVTSSPVEKKDKEETVFQVSYPSAFSKLVASRQVSP 747
+T ++E+ S +V S P+E+K E + +PS+ S V + +P
Sbjct: 881 ESLQTVAEEESCSPSVELEKPPPVNVDSKPIEEKTVEVNDRKAEFPSSGSNSVLN---TP 937
Query: 748 LLASQSWSSRSMSPNLLNRAS-----PLAFN---IANSSSEADCPDPFANGADVQVSNID 799
+S SS +++ ++S PLA N + + SE D S I+
Sbjct: 938 PTTPESPSSVTVTEGSRQQSSVTVSEPLAPNQEEVRSIKSETD-------------STIE 984
Query: 800 YRLSRKELQQLLQEA-FARHGKVKSVELS----PHTDYQLKAVVQMENLQDAIGAVNSLH 854
ELQ L E + G SV S P ++ KA + ++DA G +S
Sbjct: 985 VDSVAGELQDLQSEGNSSPAGFDASVSSSSSNQPEPEHPEKACTGQKRVKDAQGGGSSSK 1044
Query: 855 RYKIGSKKILVS 866
+ K K +V+
Sbjct: 1045 KQKRSHKATVVN 1056
>gi|22035677 AT rich interactive domain 4B isoform 1 [Homo sapiens]
Length = 1312
Score = 36.6 bits (83), Expect = 0.22
Identities = 74/312 (23%), Positives = 122/312 (39%), Gaps = 46/312 (14%)
Query: 585 KNRE-LCETKSSNAIADKVKSPKKLKNPKLCLIKDASEQSSSAKAT---PGKGSQANSGS 640
KN+E LC SSN+ +D+ + K K E+ S + T G A
Sbjct: 847 KNKESLCMENSSNSSSDEDEEETKAKMTPTKKYNGLEEKRKSLRTTGFYSGFSEVAEKRI 906
Query: 641 ATKNTNVKSLQELCRMESKTGHRNSEHQQGHLRLVVPTHGNSSAAVSTPKN----SGVAE 696
N + + LQ + K + + Q L + + A ++P + GVAE
Sbjct: 907 KLLNNSDERLQNSRAKDRKDVWSSIQGQWPKKTLKELFSDSDTEAAASPPHPAPEEGVAE 966
Query: 697 PVYKTSQKKENLSAR---------SVTSSPVEKKDKEETVFQVSYPSAFSKLVASRQVSP 747
+T ++E+ S +V S P+E+K E + +PS+ S V + +P
Sbjct: 967 ESLQTVAEEESCSPSVELEKPPPVNVDSKPIEEKTVEVNDRKAEFPSSGSNSVLN---TP 1023
Query: 748 LLASQSWSSRSMSPNLLNRAS-----PLAFN---IANSSSEADCPDPFANGADVQVSNID 799
+S SS +++ ++S PLA N + + SE D S I+
Sbjct: 1024 PTTPESPSSVTVTEGSRQQSSVTVSEPLAPNQEEVRSIKSETD-------------STIE 1070
Query: 800 YRLSRKELQQLLQEA-FARHGKVKSVELS----PHTDYQLKAVVQMENLQDAIGAVNSLH 854
ELQ L E + G SV S P ++ KA + ++DA G +S
Sbjct: 1071 VDSVAGELQDLQSEGNSSPAGFDASVSSSSSNQPEPEHPEKACTGQKRVKDAQGGGSSSK 1130
Query: 855 RYKIGSKKILVS 866
+ K K +V+
Sbjct: 1131 KQKRSHKATVVN 1142
>gi|194733742 Wolf-Hirschhorn syndrome candidate 2 protein [Homo
sapiens]
Length = 539
Score = 36.2 bits (82), Expect = 0.29
Identities = 37/158 (23%), Positives = 68/158 (43%), Gaps = 14/158 (8%)
Query: 1578 QPSEGERILEVPESHTASEL----KLGADGSGPSHTEQELLRLTDDSPVDLLCAPVPSCL 1633
+P++ E ++E A+ L KLG+ + P+ L T P P S +
Sbjct: 296 KPAKEETVVENATPDYAAGLVSTQKLGSLNNEPA------LPSTSYLPSTPSVVPASSYI 349
Query: 1634 PSPQLRPDPVILQSADLIQFEERPQEPSEIMILNQEEKMEIPIPGKSK-TLTSDSSSSCI 1692
PS + P P S + + E P PS + +++ + G S T T + +S +
Sbjct: 350 PSSETPPAP---SSREASRPPEEPSAPSPTLPAQFKQRAPMYNSGLSPATPTPAAPTSPL 406
Query: 1693 SAAVPVPPCPSSETSESLLSKDPVESPAKKQPKNRVKL 1730
+ P P+++T + ++PA++QPK + L
Sbjct: 407 TPTTPPAVAPTTQTPPVAMVAPQTQAPAQQQPKKNLSL 444
>gi|217416362 zinc finger CCCH-type containing 8 [Homo sapiens]
Length = 291
Score = 36.2 bits (82), Expect = 0.29
Identities = 24/92 (26%), Positives = 45/92 (48%), Gaps = 6/92 (6%)
Query: 636 ANSGSATKNTNVKSLQELCRMESKT---GHRNSEHQQGHLRLVVPTHGNSSAAVSTPKNS 692
A +TK VK + + ++K GH+N + ++ + P + S+A + +NS
Sbjct: 107 AQPEESTKKEGVKDTPQAAKQKNKNLKAGHKNGKQKKMKRKWPGPGNKGSNALL---RNS 163
Query: 693 GVAEPVYKTSQKKENLSARSVTSSPVEKKDKE 724
G E K +K+++LS + VE+K K+
Sbjct: 164 GSQEEDGKPKEKQQHLSQAFINQHTVERKGKQ 195
>gi|58530876 melanoma antigen family C, 1 [Homo sapiens]
Length = 1142
Score = 35.8 bits (81), Expect = 0.37
Identities = 44/162 (27%), Positives = 61/162 (37%), Gaps = 16/162 (9%)
Query: 1557 LKNDMKSRLSSLSLSPANHENQPSEGERI---LEVPESHTASELKLGADGSGPSHTEQEL 1613
L+N S SLSP P EGE + L+ P S S L S P T+
Sbjct: 96 LQNSQSSPEGKDSLSPLEISQSPPEGEDVQSPLQNPASSFFSSALLSIFQSSPESTQSPF 155
Query: 1614 LRLTDDSPVDLLCAPVPSCLPSPQL---RPDPVILQSADLIQFEERPQEPSEIMILNQEE 1670
+ P +L PV + S + + P QS FE PQ P +I +
Sbjct: 156 ----EGFPQSVLQIPVSAASSSTLVSIFQSSPESTQS----PFEGFPQSPLQIPVSRSFS 207
Query: 1671 KMEIPIPGKSKTLTSDSSSSCISAAVPVPPCPSSETSESLLS 1712
+ I S T + + + +P PSS S +LLS
Sbjct: 208 STLLSIFQSSPERTQSTFEGFAQSPLQIPVSPSS--SSTLLS 247
>gi|148368962 NKF3 kinase family member [Homo sapiens]
Length = 1746
Score = 35.8 bits (81), Expect = 0.37
Identities = 32/89 (35%), Positives = 43/89 (48%), Gaps = 5/89 (5%)
Query: 681 NSSAAVSTPKNSGVAEPVYKTSQKKENLSARSVTSSPVEKKDKEETVFQVSYPSAFSKLV 740
++ A STPK++ V TSQ A T SP K K+ ++ V+ PS SKLV
Sbjct: 802 DADVAKSTPKSTPVRPKSLFTSQPSGEAEAPQTTDSPTTKVQKDPSIKPVT-PSP-SKLV 859
Query: 741 ASRQ---VSPLLASQSWSSRSMSPNLLNR 766
S Q +P +S SS + NLL R
Sbjct: 860 TSPQSEPPAPFPPPRSTSSPYHAGNLLQR 888
>gi|33286436 gametogenetin [Homo sapiens]
Length = 652
Score = 35.8 bits (81), Expect = 0.37
Identities = 24/65 (36%), Positives = 29/65 (44%), Gaps = 2/65 (3%)
Query: 291 PNIPPPNTQPAPLAV--PLCNGCGTKGTGKETTLLLATSLGKAASKFGSPEVAVAGQVLE 348
P + PP QP PL V PL G G K + T A AA + +P A A V E
Sbjct: 447 PTLQPPALQPTPLPVAPPLTPGLGHKESALAPTAAPALPPALAADQAPAPSPAPAPTVAE 506
Query: 349 NLPPI 353
PP+
Sbjct: 507 PSPPV 511
>gi|157384971 cyclin G associated kinase [Homo sapiens]
Length = 1311
Score = 35.4 bits (80), Expect = 0.49
Identities = 44/169 (26%), Positives = 74/169 (43%), Gaps = 22/169 (13%)
Query: 1572 PANHENQPS---EGERILEVPESHTASELKLGADGSGPSHTEQELLRLTDDSPV-DLLCA 1627
P + ++ PS + R L + E + GA+ + +E L+ D+S V D +
Sbjct: 775 PTDSDSPPSSSADASRFLHTLDWQEEKEAETGAENASSKESESALMEDRDESEVSDEGGS 834
Query: 1628 PVPSCLPSPQLRPDPVILQSADLIQF-------------EERPQEPS-EIMILNQEEKME 1673
P+ S P+ P+P L +A L+Q E PQE +++ L+ E
Sbjct: 835 PISSEGQEPRADPEPPGL-AAGLVQQDLVFEVETPAVLPEPVPQEDGVDLLGLHSEVGAG 893
Query: 1674 IPIPGKSKTLTSDSSSSCISAAVPVPPCPSSETSESLLSKDP--VESPA 1720
+P ++ S S++ +S + P S E LLS+DP + SPA
Sbjct: 894 PAVPPQACKAPS-SNTDLLSCLLGPPEAASQGPPEDLLSEDPLLLASPA 941
>gi|71274111 v-maf musculoaponeurotic fibrosarcoma oncogene homolog
A [Homo sapiens]
Length = 353
Score = 35.0 bits (79), Expect = 0.64
Identities = 20/43 (46%), Positives = 23/43 (53%), Gaps = 3/43 (6%)
Query: 89 PKIQLSSVPKVSCCAHCPNEPS---TSPMRFGGGGGGSGGTSS 128
P LSS P + C+ P+ PS SP GGGG G GG SS
Sbjct: 46 PPGSLSSTPLSTPCSSVPSSPSFCAPSPGTGGGGGAGGGGGSS 88
>gi|42544123 splicing factor 1 isoform 3 [Homo sapiens]
Length = 548
Score = 34.7 bits (78), Expect = 0.83
Identities = 34/115 (29%), Positives = 49/115 (42%), Gaps = 18/115 (15%)
Query: 32 SNC-FSRPEQTLPHSPQTKEYMENKKVAV--ELKDVPSPLHAGSKLFPAVPLPDIRSLQQ 88
S+C F RP P S Q K M+ + +++ EL + P P GS PA + S +
Sbjct: 290 SDCKFQRPGD--PQSAQDKARMDKEYLSLMAELGEAPVPASVGSTSGPATT--PLASAPR 345
Query: 89 PKIQLSSVPKVSCCAHCPNEP---STSP--------MRFGGGGGGSGGTSSLIHP 132
P ++ P S + + P ++ P M GG GG GG S HP
Sbjct: 346 PAAPANNPPPPSLMSTTQSRPPWMNSGPSESRPYHGMHGGGPGGPGGGPHSFPHP 400
>gi|42544125 splicing factor 1 isoform 2 [Homo sapiens]
Length = 638
Score = 34.7 bits (78), Expect = 0.83
Identities = 34/115 (29%), Positives = 49/115 (42%), Gaps = 18/115 (15%)
Query: 32 SNC-FSRPEQTLPHSPQTKEYMENKKVAV--ELKDVPSPLHAGSKLFPAVPLPDIRSLQQ 88
S+C F RP P S Q K M+ + +++ EL + P P GS PA + S +
Sbjct: 290 SDCKFQRPGD--PQSAQDKARMDKEYLSLMAELGEAPVPASVGSTSGPATT--PLASAPR 345
Query: 89 PKIQLSSVPKVSCCAHCPNEP---STSP--------MRFGGGGGGSGGTSSLIHP 132
P ++ P S + + P ++ P M GG GG GG S HP
Sbjct: 346 PAAPANNPPPPSLMSTTQSRPPWMNSGPSESRPYHGMHGGGPGGPGGGPHSFPHP 400
>gi|42544130 splicing factor 1 isoform 1 [Homo sapiens]
Length = 639
Score = 34.7 bits (78), Expect = 0.83
Identities = 34/115 (29%), Positives = 49/115 (42%), Gaps = 18/115 (15%)
Query: 32 SNC-FSRPEQTLPHSPQTKEYMENKKVAV--ELKDVPSPLHAGSKLFPAVPLPDIRSLQQ 88
S+C F RP P S Q K M+ + +++ EL + P P GS PA + S +
Sbjct: 290 SDCKFQRPGD--PQSAQDKARMDKEYLSLMAELGEAPVPASVGSTSGPATT--PLASAPR 345
Query: 89 PKIQLSSVPKVSCCAHCPNEP---STSP--------MRFGGGGGGSGGTSSLIHP 132
P ++ P S + + P ++ P M GG GG GG S HP
Sbjct: 346 PAAPANNPPPPSLMSTTQSRPPWMNSGPSESRPYHGMHGGGPGGPGGGPHSFPHP 400
>gi|62241003 cardiomyopathy associated 5 [Homo sapiens]
Length = 4069
Score = 34.7 bits (78), Expect = 0.83
Identities = 41/195 (21%), Positives = 81/195 (41%), Gaps = 24/195 (12%)
Query: 1551 HKRIVVLKNDMKSRLSSLSLSPANHENQPSEGERILEVPESHTAS---ELKLGADGSGPS 1607
H+ + L ++K + + L P++ P+ I + + TAS EL+ A G P+
Sbjct: 1527 HELPLSLWGEIKKKETEL---PSSQNVSPASKHIIPKGKDEETASSSPELENLASGLAPT 1583
Query: 1608 HTEQELLRLTDDSPVDLLCAPVPSCLPSPQLRPDPVILQSADLIQFEERPQEPSEIMILN 1667
LL L+DD + + P + D + + + + +++P +P E+
Sbjct: 1584 -----LLLLSDDKNKPAVEVSSTAQGDFPSEKQDVALAELSLEPEKKDKPHQPLEL---- 1634
Query: 1668 QEEKMEIPIPGKSKTLTSDSSSSCISAAVPVPPCPSSETSESLLSKDPVESPAKKQPKNR 1727
P +SD S P +ET +S+L K P E +++ +
Sbjct: 1635 ---------PNAGSEFSSDLGRQSGSIGTKQAKSPITETEDSVLEKGPAELRSREGKEEN 1685
Query: 1728 VKLAANFSLAPITKL 1742
+L A+ ++ I++L
Sbjct: 1686 RELCASSTMPAISEL 1700
>gi|157738649 neurofilament, medium polypeptide 150kDa isoform 1 [Homo
sapiens]
Length = 916
Score = 34.3 bits (77), Expect = 1.1
Identities = 46/163 (28%), Positives = 63/163 (38%), Gaps = 32/163 (19%)
Query: 1571 SPANHENQPSEGERILEVP-ESHTASELKLGADGSGPSHTEQELLRLTDDSPVDLLCAPV 1629
S E + EGE E E A E K + S T++EL+ + +PV
Sbjct: 558 SSEKEEGEQEEGETEAEAEGEEAEAKEEKKVEEKSEEVATKEELVADAKVEKPEKAKSPV 617
Query: 1630 PSCLPSPQLRPDPVILQSADLIQFEERPQEPSEIMILNQEEKMEIPIPGKSKTLTSDSSS 1689
P P + PV P+ P E EK + P+P K+ +
Sbjct: 618 PKS-PVEEKGKSPV-------------PKSPVE-------EKGKSPVP---KSPVEEKGK 653
Query: 1690 SCISAAVPVPPCPSSETSESLLSKDPVESPAKKQ-PKNRVKLA 1731
S PVP P E +S +SK PVE AK PK+ V+ A
Sbjct: 654 S------PVPKSPVEEKGKSPVSKSPVEEKAKSPVPKSPVEEA 690
>gi|157738641 neurofilament, medium polypeptide 150kDa isoform 2 [Homo
sapiens]
Length = 540
Score = 34.3 bits (77), Expect = 1.1
Identities = 46/163 (28%), Positives = 63/163 (38%), Gaps = 32/163 (19%)
Query: 1571 SPANHENQPSEGERILEVP-ESHTASELKLGADGSGPSHTEQELLRLTDDSPVDLLCAPV 1629
S E + EGE E E A E K + S T++EL+ + +PV
Sbjct: 182 SSEKEEGEQEEGETEAEAEGEEAEAKEEKKVEEKSEEVATKEELVADAKVEKPEKAKSPV 241
Query: 1630 PSCLPSPQLRPDPVILQSADLIQFEERPQEPSEIMILNQEEKMEIPIPGKSKTLTSDSSS 1689
P P + PV P+ P E EK + P+P K+ +
Sbjct: 242 PKS-PVEEKGKSPV-------------PKSPVE-------EKGKSPVP---KSPVEEKGK 277
Query: 1690 SCISAAVPVPPCPSSETSESLLSKDPVESPAKKQ-PKNRVKLA 1731
S PVP P E +S +SK PVE AK PK+ V+ A
Sbjct: 278 S------PVPKSPVEEKGKSPVSKSPVEEKAKSPVPKSPVEEA 314
>gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]
Length = 2752
Score = 34.3 bits (77), Expect = 1.1
Identities = 41/164 (25%), Positives = 59/164 (35%), Gaps = 22/164 (13%)
Query: 1569 SLSPANHENQPSEGERILEVPESHTASELKLGADGSGPSHTEQELLRLTDDSPVDLLCAP 1628
+L PA S S ++S + GS S +E L + + V L P
Sbjct: 2523 ALQPAKERRSSSSSSSSSSSSSSSSSSSSSSSSSGSSSSDSEGSSLPVQPE--VALKRVP 2580
Query: 1629 VPSCLPSPQLRPDPVILQSADLIQFEERPQEPSEIMILNQEEKMEIPIPGKSKTLTSDSS 1688
P+ P +R E RP EP+ + S + +S SS
Sbjct: 2581 SPTPAPKEAVR--------------EGRPPEPTPAKRKRRSSS------SSSSSSSSSSS 2620
Query: 1689 SSCISAAVPVPPCPSSETSESLLSKDPVESPAKKQPKNRVKLAA 1732
SS S++ SS +S S S SPAK P+ K A+
Sbjct: 2621 SSSSSSSSSSSSSSSSSSSSSSSSSSSSPSPAKPGPQALPKPAS 2664
>gi|194018562 histamine receptor H3 [Homo sapiens]
Length = 445
Score = 33.9 bits (76), Expect = 1.4
Identities = 20/51 (39%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Query: 294 PPPNTQPAPLAVPLCNGCGTKGTGKETTLLLATSLGKAASKFGSPEVAVAG 344
PPP QP+P P C GC KG G E L +G+AA + E + G
Sbjct: 244 PPPEAQPSPPPPPGCWGCWQKGHG-EAMPLHRYGVGEAAVGAEAGEATLGG 293
>gi|32483416 neurofilament, heavy polypeptide 200kDa [Homo sapiens]
Length = 1020
Score = 33.9 bits (76), Expect = 1.4
Identities = 33/171 (19%), Positives = 60/171 (35%), Gaps = 6/171 (3%)
Query: 591 ETKSSNAIADKVKSPKKLKNPKLCLIKDASEQSSSAKATPGKGSQANSGSATKNTNVKSL 650
E ++ + + ++ KSP + K+P+ K +E S KA +A S K+ +
Sbjct: 513 EKEAKSPVKEEAKSPAEAKSPEKEEAKSPAEVKSPEKAKSPAKEEAKSPPEAKSPEKEEA 572
Query: 651 QELCRMESKTGHRNSEHQQGHLRLVVPTHGNSSAAVSTPKNSGVAEPVYKTSQKKENLSA 710
+ ++S ++ ++ P S +P P S KE +
Sbjct: 573 KSPAEVKSPEKAKSPAKEEAK----SPAEAKSPEKAKSPVKEEAKSPAEAKSPVKEEAKS 628
Query: 711 RSVTSSPVEKKDKEETVFQVSYPSAFSKLVASRQVSPLLASQSWSSRSMSP 761
+ SP +K K T + P SP A + + SP
Sbjct: 629 PAEVKSP--EKAKSPTKEEAKSPEKAKSPEKEEAKSPEKAKSPVKAEAKSP 677
Score = 31.2 bits (69), Expect = 9.2
Identities = 24/74 (32%), Positives = 36/74 (48%), Gaps = 4/74 (5%)
Query: 753 SWSSRSMSPNLLNRASPLAFNIANSSSEADCPDPFANGADVQVSNIDYRLSRKELQQLLQ 812
SW+ S+S ASP F A ++S D D +NG + + + S KE Q L
Sbjct: 49 SWTRTSVSSV---SASPSRFRGAGAASSTDSLDTLSNGPEGCMVAVATSRSEKEQLQALN 105
Query: 813 EAFARH-GKVKSVE 825
+ FA + KV+ +E
Sbjct: 106 DRFAGYIDKVRQLE 119
>gi|72256200 B-cell CLL/lymphoma 9 [Homo sapiens]
Length = 1426
Score = 33.9 bits (76), Expect = 1.4
Identities = 32/141 (22%), Positives = 58/141 (41%), Gaps = 17/141 (12%)
Query: 590 CETKSSNAIADKVKSPKKLKNPKLCL-IKDASEQSSSAKATPGKGSQANS------GSAT 642
C++KS +PK L P + +K+ + + K + A+S G+
Sbjct: 64 CDSKSGG------HTPKALPGPGGSMGLKNGAGNGAKGKGKRERSISADSFDQRDPGTPN 117
Query: 643 KNTNVKSLQELCRMESK----TGHRNSEHQQGHLRLVVPTHGNSSAAVSTPKNSGVAEPV 698
++++K ++S+ T H + R P+HG ++A TP A+ V
Sbjct: 118 DDSDIKECNSADHIKSQDSQHTPHSMTPSNATAPRSSTPSHGQTTATEPTPAQKTPAKVV 177
Query: 699 YKTSQKKENLSARSVTSSPVE 719
Y S + N +A +V VE
Sbjct: 178 YVFSTEMANKAAEAVLKGQVE 198
>gi|148886692 FAT tumor suppressor homolog 3 [Homo sapiens]
Length = 4557
Score = 33.9 bits (76), Expect = 1.4
Identities = 71/278 (25%), Positives = 102/278 (36%), Gaps = 36/278 (12%)
Query: 87 QQPKIQLSSVPKVSCCAHCPNEPSTSPMRFGGGG----GGSGGTSSLIHPGALLDSQSTR 142
+ P+I L++ V C+ PN P+ SP R G GT + G + T
Sbjct: 4269 ESPRI-LTARRGVVVCSVAPNLPAVSPCRSDCDSIRKNGWDAGTEN---KGVDDPGEVTC 4324
Query: 143 TITCQVGSGFAFQSASSLQNASARNNLAGIASDFPSMCLESNLSSCKHLPCCGKLHFQSC 202
GS QS SS Q+ S +N D + LS + +P S
Sbjct: 4325 FAGSNKGSNSEVQSLSSFQSDSGDDN--AYHWDTSDWMPGARLSDIEEVPNYENQDGGSA 4382
Query: 203 H-GNVHKLHQFPSLQGCTSAGYFPCSDFTSGAPGHLEEHISQSELTPHLCTNSLH----L 257
H G+ +L L G +P P H EE +SQ +L P L + L
Sbjct: 4383 HQGSTRELESDYYLGGYDIDSEYP--------PPHEEEFLSQDQLPPPLPEDFPDQYEAL 4434
Query: 258 NVVPPVCLKGSLYCEDCLNKPA-RNSIIDAAKVWPNI-----PPPNTQPAPLAVPLCNGC 311
PV L +L DC +P S +PN PP + + + AV + G
Sbjct: 4435 PPSQPVSLASTL-SPDCRRRPQFHPSQYLPPHPFPNETDLVGPPASCEFSTFAVSMNQGT 4493
Query: 312 GTKGTGKETTLLLATSLGKAASK------FGSPEVAVA 343
G +L L S G ++S F EVA++
Sbjct: 4494 EPTGPADSVSLSLHNSRGTSSSDVSANCGFDDSEVAMS 4531
>gi|5453936 POU class 3 homeobox 3 [Homo sapiens]
Length = 500
Score = 33.9 bits (76), Expect = 1.4
Identities = 14/24 (58%), Positives = 15/24 (62%)
Query: 110 STSPMRFGGGGGGSGGTSSLIHPG 133
S P GGGGG GG SL+HPG
Sbjct: 235 SAPPGPGGGGGGAGGGAQSLVHPG 258
>gi|5031923 meiotic recombination 11 homolog A isoform 1 [Homo
sapiens]
Length = 708
Score = 33.5 bits (75), Expect = 1.9
Identities = 41/178 (23%), Positives = 71/178 (39%), Gaps = 34/178 (19%)
Query: 620 SEQSSSAKATPGKG-SQANSGSATKNTNVKSLQELCRMESKTGHRNSEHQQGHLRLVVPT 678
S+ S SA G+G + G +N+ + + R + TG S +
Sbjct: 558 SDDSISAATNKGRGRGRGRRGGRGQNSASRGGSQ--RGRADTGLETSTRSR--------- 606
Query: 679 HGNSSAAVSTPKNSGVAEPVYKTSQK-KENLSARSVTSS-PVEKKDKEETVFQVSYPSAF 736
NS AVS +N + + T Q+ N++ ++ + V++ D EE +F + +
Sbjct: 607 --NSKTAVSASRNMSIIDAFKSTRQQPSRNVTTKNYSEVIEVDESDVEEDIFPTTSKT-- 662
Query: 737 SKLVASRQVSPLLASQSWSSRSMSPNLLNRASPLAFNIANSSSEADCPDPFANGADVQ 794
Q WSS S S + S ++ + SSE D DPF N + ++
Sbjct: 663 --------------DQRWSSTSSSK--IMSQSQVSKGVDFESSEDDDDDPFMNTSSLR 704
>gi|7657387 CCR4-NOT transcription complex, subunit 3 [Homo sapiens]
Length = 753
Score = 33.5 bits (75), Expect = 1.9
Identities = 27/68 (39%), Positives = 31/68 (45%), Gaps = 3/68 (4%)
Query: 64 VPSPLHAGSKLFP-AVPLPDIRS-LQQPKIQLSSVPKVSCCAHC-PNEPSTSPMRFGGGG 120
VP+P S L P A P P S P Q + P S + P PS P GGGG
Sbjct: 343 VPAPAAPPSALGPKASPAPSHNSGTPAPYAQAVAPPAPSGPSTTQPRPPSVQPSGGGGGG 402
Query: 121 GGSGGTSS 128
G GG+SS
Sbjct: 403 SGGGGSSS 410
>gi|122937492 SET domain containing 5 [Homo sapiens]
Length = 1442
Score = 33.5 bits (75), Expect = 1.9
Identities = 42/189 (22%), Positives = 71/189 (37%), Gaps = 34/189 (17%)
Query: 1562 KSRLSSLSLSPANHENQPSEGERILEVPESHTASELKLGADGSGPSHTEQELLRLTDDSP 1621
K+R L + N ++ + ++ EVPE T S D E+E + DD
Sbjct: 443 KARRKELEMEQQNEASEENNDQQSQEVPEKVTVSSDHEEVDNP-EEKPEEEKEEVIDDQE 501
Query: 1622 VDLLCAPVPSCLPSPQLRPDPVILQSADLIQFE---------ERPQEPSEIMILNQEEKM 1672
+ S + R D + A + FE ++P E S +
Sbjct: 502 ---------NLAHSRRTREDRKV--EAIMHAFENLEKRKKRRDQPLEQSNSDVEITTTTS 550
Query: 1673 EIPIPGKSKTLTSDSSSSCISAAVPVPPCPSSE-------------TSESLLSKDPVESP 1719
E P+ ++KT +S S + V +P P S +E L+ K P P
Sbjct: 551 ETPVGEETKTEAPESEVSNSVSNVTIPSTPQSVGVNTRRSSQAGDIAAEKLVPKPPPAKP 610
Query: 1720 AKKQPKNRV 1728
++ +PK+R+
Sbjct: 611 SRPRPKSRI 619
>gi|222352122 hypothetical protein LOC284297 [Homo sapiens]
Length = 1573
Score = 33.1 bits (74), Expect = 2.4
Identities = 21/57 (36%), Positives = 28/57 (49%), Gaps = 9/57 (15%)
Query: 1587 EVPESHTASELKLGADGSGPSHTEQELLRLTDDSPVDLLCAPVPSCLPSPQLRPDPV 1643
+VPES T +L D + S T E R D SP +P P+ P P + PDP+
Sbjct: 1117 QVPESDTTPDL----DTTPYSSTVSEYSRSPDPSP-----SPHPTTTPDPTMAPDPI 1164
>gi|67514036 SH3-domain kinase binding protein 1 isoform b [Homo
sapiens]
Length = 628
Score = 33.1 bits (74), Expect = 2.4
Identities = 48/201 (23%), Positives = 82/201 (40%), Gaps = 24/201 (11%)
Query: 669 QGHLRLVVPTHGNSSAAVSTPKNSGVAEPVYKTSQKKENLSARSVTSSPVEKKDKEETVF 728
+G +V T S S PK +G P S +LS+ + SP ++DKEE +
Sbjct: 427 EGFDSVVSSTEKLSHPTTSRPKATGRRPP--SQSLTSSSLSSPDIFDSPSPEEDKEEHIS 484
Query: 729 ----QVSYPSAFSKLVASRQVSPLLASQSWSSRSMS-----PNLLNRA--SPLAFNIANS 777
V SK V QVS AS +M+ P L+ A SPL+ ++ +
Sbjct: 485 LAHRGVDASKKTSKTVTISQVSDNKASLPPKPGTMAAGGGGPAPLSSAAPSPLSSSLGTA 544
Query: 778 SSEADCPDPFAN--------GADVQVSNIDYRLSRKELQQLLQ---EAFARHGKVKSVEL 826
A+ P F A Q + + R +EL+ +++ + R K EL
Sbjct: 545 GHRANSPSLFGTEGKPKMEPAASSQAAVEELRTQVRELRSIIETMKDQQKREIKQLLSEL 604
Query: 827 SPHTDYQLKAVVQMENLQDAI 847
+L+ +++ +++ A+
Sbjct: 605 DEEKKIRLRLQMEVNDIKKAL 625
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.131 0.389
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 69,599,073
Number of Sequences: 37866
Number of extensions: 3412625
Number of successful extensions: 14774
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 92
Number of HSP's that attempted gapping in prelim test: 14400
Number of HSP's gapped (non-prelim): 431
length of query: 1742
length of database: 18,247,518
effective HSP length: 116
effective length of query: 1626
effective length of database: 13,855,062
effective search space: 22528330812
effective search space used: 22528330812
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 69 (31.2 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.