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Search of human proteins with 5901986
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|5901986 G antigen, family C, 1 [Homo sapiens]
(102 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|5901986 G antigen, family C, 1 [Homo sapiens] 213 3e-56
gi|62632767 P antigen family, member 2B [Homo sapiens] 72 9e-14
gi|62988344 P antigen family, member 3 (prostate associated) [Ho... 72 1e-13
gi|61743936 P antigen family, member 5 isoform 2 [Homo sapiens] 70 5e-13
gi|19743940 P antigen family, member 5 isoform 1 [Homo sapiens] 70 5e-13
gi|46409314 P antigen family, member 2 [Homo sapiens] 67 2e-12
gi|19747273 X antigen family, member 5 [Homo sapiens] 67 4e-12
gi|19747271 XAGE-3 protein [Homo sapiens] 62 7e-11
gi|19747269 XAGE-3 protein [Homo sapiens] 62 7e-11
gi|98985822 G antigen 1 isoform 2 [Homo sapiens] 54 2e-08
gi|118601000 X antigen family, member 2-like [Homo sapiens] 53 6e-08
gi|19747283 XAGE-2 protein [Homo sapiens] 53 6e-08
gi|148491076 G antigen 2D [Homo sapiens] 51 2e-07
gi|4503885 G antigen 5 [Homo sapiens] 51 2e-07
gi|4503883 G antigen 4 [Homo sapiens] 51 2e-07
gi|7705379 G antigen 8 [Homo sapiens] 51 2e-07
gi|4503887 G antigen 6 [Homo sapiens] 51 2e-07
gi|148491062 G antigen 12J [Homo sapiens] 50 4e-07
gi|187608830 G antigen 2E [Homo sapiens] 50 4e-07
gi|148528977 G antigen 13 [Homo sapiens] 49 9e-07
gi|148491064 G antigen 12G [Homo sapiens] 49 1e-06
gi|148529018 G antigen 2B [Homo sapiens] 49 1e-06
gi|187761326 G antigen 2A [Homo sapiens] 49 1e-06
gi|11024641 G antigen 7 [Homo sapiens] 49 1e-06
gi|150010546 G antigen 10 [Homo sapiens] 49 1e-06
gi|148491078 G antigen 12F [Homo sapiens] 49 1e-06
gi|4503889 G antigen 12I [Homo sapiens] 49 1e-06
gi|4503879 G antigen 2 [Homo sapiens] 49 1e-06
gi|148491101 G antigen 12C [Homo sapiens] 47 2e-06
gi|148491084 G antigen 12H [Homo sapiens] 47 2e-06
>gi|5901986 G antigen, family C, 1 [Homo sapiens]
Length = 102
Score = 213 bits (541), Expect = 3e-56
Identities = 102/102 (100%), Positives = 102/102 (100%)
Query: 1 MSARVRSRSRGRGDGQEAPDVVAFVAPGESQQEEPPTDNQDIEPGQEREGTPPIEERKVE 60
MSARVRSRSRGRGDGQEAPDVVAFVAPGESQQEEPPTDNQDIEPGQEREGTPPIEERKVE
Sbjct: 1 MSARVRSRSRGRGDGQEAPDVVAFVAPGESQQEEPPTDNQDIEPGQEREGTPPIEERKVE 60
Query: 61 GDCQEMDLEKTRSERGDGSDVKEKTPPNPKHAKTKEAGDGQP 102
GDCQEMDLEKTRSERGDGSDVKEKTPPNPKHAKTKEAGDGQP
Sbjct: 61 GDCQEMDLEKTRSERGDGSDVKEKTPPNPKHAKTKEAGDGQP 102
>gi|62632767 P antigen family, member 2B [Homo sapiens]
Length = 111
Score = 72.0 bits (175), Expect = 9e-14
Identities = 46/106 (43%), Positives = 55/106 (51%), Gaps = 7/106 (6%)
Query: 4 RVRSRSRGRGDGQEAPDVVAFVAPGES-----QQEEPPTDNQDIEPGQE--REGTPPIEE 56
R RS+S RG+ QE+ V V E Q+EEPPTDNQ I P E EG P ++
Sbjct: 6 RTRSQSSERGNDQESSQPVGSVIVQEPTEEKRQEEEPPTDNQGIAPSGEIENEGAPAVQG 65
Query: 57 RKVEGDCQEMDLEKTRSERGDGSDVKEKTPPNPKHAKTKEAGDGQP 102
+E QE+ L K E GDG DV+E P K EAGD QP
Sbjct: 66 PDMEAFQQELALLKIEDEPGDGPDVREGIMPTFDLTKVLEAGDAQP 111
>gi|62988344 P antigen family, member 3 (prostate associated) [Homo
sapiens]
Length = 113
Score = 71.6 bits (174), Expect = 1e-13
Identities = 46/106 (43%), Positives = 57/106 (53%), Gaps = 7/106 (6%)
Query: 4 RVRSRSRGRGDGQEAPDVVAFVAPGES------QQEEPPTDNQDIEPGQER-EGTPPIEE 56
R RSRSR R D Q++ V V E QQEEPP ++QD PGQER EG +
Sbjct: 6 RTRSRSRERRDDQDSNHPVGAVVAQELPSNDQLQQEEPPIESQDYTPGQERDEGALDFQV 65
Query: 57 RKVEGDCQEMDLEKTRSERGDGSDVKEKTPPNPKHAKTKEAGDGQP 102
+ E+ KT ERGDG +VK + PN + K EAG+GQP
Sbjct: 66 LGLAAYLWELTRSKTGGERGDGPNVKGEFLPNLEPVKIPEAGEGQP 111
>gi|61743936 P antigen family, member 5 isoform 2 [Homo sapiens]
Length = 110
Score = 69.7 bits (169), Expect = 5e-13
Identities = 44/103 (42%), Positives = 55/103 (53%), Gaps = 7/103 (6%)
Query: 6 RSRSRGRGDGQEA-----PDVVAFVAPGESQQEEPPTDNQDIEPGQE--REGTPPIEERK 58
RS+S RG+ QE+ P +V + Q+EEPPTDNQ I P E EG P ++
Sbjct: 7 RSQSSERGNDQESSQPVGPVIVQQPTEEKRQEEEPPTDNQGIAPSGEIKNEGAPAVQGTD 66
Query: 59 VEGDCQEMDLEKTRSERGDGSDVKEKTPPNPKHAKTKEAGDGQ 101
VE QE+ L K GDG DV+E T P K EAG+GQ
Sbjct: 67 VEAFQQELALLKIEDAPGDGPDVREGTLPTFDPTKVLEAGEGQ 109
>gi|19743940 P antigen family, member 5 isoform 1 [Homo sapiens]
Length = 130
Score = 69.7 bits (169), Expect = 5e-13
Identities = 44/103 (42%), Positives = 55/103 (53%), Gaps = 7/103 (6%)
Query: 6 RSRSRGRGDGQEA-----PDVVAFVAPGESQQEEPPTDNQDIEPGQE--REGTPPIEERK 58
RS+S RG+ QE+ P +V + Q+EEPPTDNQ I P E EG P ++
Sbjct: 27 RSQSSERGNDQESSQPVGPVIVQQPTEEKRQEEEPPTDNQGIAPSGEIKNEGAPAVQGTD 86
Query: 59 VEGDCQEMDLEKTRSERGDGSDVKEKTPPNPKHAKTKEAGDGQ 101
VE QE+ L K GDG DV+E T P K EAG+GQ
Sbjct: 87 VEAFQQELALLKIEDAPGDGPDVREGTLPTFDPTKVLEAGEGQ 129
>gi|46409314 P antigen family, member 2 [Homo sapiens]
Length = 111
Score = 67.4 bits (163), Expect = 2e-12
Identities = 45/106 (42%), Positives = 53/106 (50%), Gaps = 7/106 (6%)
Query: 4 RVRSRSRGRGDGQEAPDVVAFVAPGES-----QQEEPPTDNQDIEPGQEREG--TPPIEE 56
R RS+S RG+ QE+ V V E Q+EEPPTDNQ I P E E P +
Sbjct: 6 RARSQSSERGNDQESSQPVGSVIVQEPTEEKRQEEEPPTDNQGIAPSGEIENQAVPAFQG 65
Query: 57 RKVEGDCQEMDLEKTRSERGDGSDVKEKTPPNPKHAKTKEAGDGQP 102
+E QE+ L K E GDG DV+E P K EAGD QP
Sbjct: 66 PDMEAFQQELALLKIEDEPGDGPDVREGIMPTFDLTKVLEAGDAQP 111
>gi|19747273 X antigen family, member 5 [Homo sapiens]
Length = 108
Score = 66.6 bits (161), Expect = 4e-12
Identities = 35/77 (45%), Positives = 45/77 (58%), Gaps = 3/77 (3%)
Query: 29 ESQQEEPPTDNQDIEPGQERE---GTPPIEERKVEGDCQEMDLEKTRSERGDGSDVKEKT 85
E QQEEPPT++QD PGQ+RE G I+ +E D QE+ KT E GD DV+ K
Sbjct: 30 EPQQEEPPTESQDHTPGQKREDDQGAAEIQVPNLEADLQELSQSKTGDECGDSPDVQGKI 89
Query: 86 PPNPKHAKTKEAGDGQP 102
P + K E G+G+P
Sbjct: 90 LPKSEQFKMPEGGEGKP 106
>gi|19747271 XAGE-3 protein [Homo sapiens]
Length = 111
Score = 62.4 bits (150), Expect = 7e-11
Identities = 38/90 (42%), Positives = 50/90 (55%), Gaps = 6/90 (6%)
Query: 19 PDVVA-FVAPG--ESQQEEPPTDNQDIEPGQEREGTPPIEERKV---EGDCQEMDLEKTR 72
P+++ + PG E QQEEPPT+++D PGQERE E +V E D QE+ KT
Sbjct: 20 PELIGPMLEPGDEEPQQEEPPTESRDPAPGQEREEDQGAAETQVPDLEADLQELSQSKTG 79
Query: 73 SERGDGSDVKEKTPPNPKHAKTKEAGDGQP 102
E G+G D + K P + K E GD QP
Sbjct: 80 GECGNGPDDQGKILPKSEQFKMPEGGDRQP 109
>gi|19747269 XAGE-3 protein [Homo sapiens]
Length = 111
Score = 62.4 bits (150), Expect = 7e-11
Identities = 38/90 (42%), Positives = 50/90 (55%), Gaps = 6/90 (6%)
Query: 19 PDVVA-FVAPG--ESQQEEPPTDNQDIEPGQEREGTPPIEERKV---EGDCQEMDLEKTR 72
P+++ + PG E QQEEPPT+++D PGQERE E +V E D QE+ KT
Sbjct: 20 PELIGPMLEPGDEEPQQEEPPTESRDPAPGQEREEDQGAAETQVPDLEADLQELSQSKTG 79
Query: 73 SERGDGSDVKEKTPPNPKHAKTKEAGDGQP 102
E G+G D + K P + K E GD QP
Sbjct: 80 GECGNGPDDQGKILPKSEQFKMPEGGDRQP 109
>gi|98985822 G antigen 1 isoform 2 [Homo sapiens]
Length = 117
Score = 54.3 bits (129), Expect = 2e-08
Identities = 32/79 (40%), Positives = 39/79 (49%), Gaps = 2/79 (2%)
Query: 25 VAPGESQQEEPPTDNQDIEPGQERE--GTPPIEERKVEGDCQEMDLEKTRSERGDGSDVK 82
V P ++ EP T QD QE E G + K E D QE +T E DG D +
Sbjct: 36 VEPATPEEGEPATQRQDPAAAQEGEDEGASAGQGPKPEADSQEQGHPQTGCECEDGPDGQ 95
Query: 83 EKTPPNPKHAKTKEAGDGQ 101
E PPNP+ KT E G+GQ
Sbjct: 96 EMDPPNPEEVKTPEEGEGQ 114
>gi|118601000 X antigen family, member 2-like [Homo sapiens]
Length = 111
Score = 52.8 bits (125), Expect = 6e-08
Identities = 40/108 (37%), Positives = 56/108 (51%), Gaps = 7/108 (6%)
Query: 1 MSARVRS--RSRGRGDGQEAPDVVAFVAPG--ESQQEEPPTDNQDIEPGQERE---GTPP 53
MS R RS R R R Q + A + P E ++E+PPT +++ P Q+RE G
Sbjct: 1 MSWRGRSTYRPRPRRSLQPPELIGAMLEPTDEEPKEEKPPTKSRNPTPDQKREDDQGAAE 60
Query: 54 IEERKVEGDCQEMDLEKTRSERGDGSDVKEKTPPNPKHAKTKEAGDGQ 101
I+ +E D QE+ KT G+DVK K P +H K EAG+G+
Sbjct: 61 IQVPDLEADLQELCQTKTGDGCEGGTDVKGKILPKAEHFKMPEAGEGK 108
>gi|19747283 XAGE-2 protein [Homo sapiens]
Length = 111
Score = 52.8 bits (125), Expect = 6e-08
Identities = 40/108 (37%), Positives = 56/108 (51%), Gaps = 7/108 (6%)
Query: 1 MSARVRS--RSRGRGDGQEAPDVVAFVAPG--ESQQEEPPTDNQDIEPGQERE---GTPP 53
MS R RS R R R Q + A + P E ++E+PPT +++ P Q+RE G
Sbjct: 1 MSWRGRSTYRPRPRRSLQPPELIGAMLEPTDEEPKEEKPPTKSRNPTPDQKREDDQGAAE 60
Query: 54 IEERKVEGDCQEMDLEKTRSERGDGSDVKEKTPPNPKHAKTKEAGDGQ 101
I+ +E D QE+ KT G+DVK K P +H K EAG+G+
Sbjct: 61 IQVPDLEADLQELCQTKTGDGCEGGTDVKGKILPKAEHFKMPEAGEGK 108
>gi|148491076 G antigen 2D [Homo sapiens]
Length = 116
Score = 51.2 bits (121), Expect = 2e-07
Identities = 31/79 (39%), Positives = 38/79 (48%), Gaps = 2/79 (2%)
Query: 25 VAPGESQQEEPPTDNQDIEPGQERE--GTPPIEERKVEGDCQEMDLEKTRSERGDGSDVK 82
V P ++ EP T QD QE E G + K E D QE +T E DG D +
Sbjct: 35 VEPATPEEGEPATQRQDPAAAQEGEDEGASAGQGPKPEADSQEQGHPQTGCECEDGPDGQ 94
Query: 83 EKTPPNPKHAKTKEAGDGQ 101
E PPNP+ KT E G+ Q
Sbjct: 95 EMDPPNPEEVKTPEEGEKQ 113
>gi|4503885 G antigen 5 [Homo sapiens]
Length = 117
Score = 51.2 bits (121), Expect = 2e-07
Identities = 31/79 (39%), Positives = 38/79 (48%), Gaps = 2/79 (2%)
Query: 25 VAPGESQQEEPPTDNQDIEPGQERE--GTPPIEERKVEGDCQEMDLEKTRSERGDGSDVK 82
V P ++ EP T QD QE E G + K E D QE +T E DG D +
Sbjct: 36 VEPATPEEGEPATQRQDPAAAQEGEDEGASAGQGPKPEADSQEQGHPQTGCECEDGPDGQ 95
Query: 83 EKTPPNPKHAKTKEAGDGQ 101
E PPNP+ KT E G+ Q
Sbjct: 96 EMDPPNPEEVKTPEEGEKQ 114
>gi|4503883 G antigen 4 [Homo sapiens]
Length = 117
Score = 51.2 bits (121), Expect = 2e-07
Identities = 31/79 (39%), Positives = 38/79 (48%), Gaps = 2/79 (2%)
Query: 25 VAPGESQQEEPPTDNQDIEPGQERE--GTPPIEERKVEGDCQEMDLEKTRSERGDGSDVK 82
V P ++ EP T QD QE E G + K E D QE +T E DG D +
Sbjct: 36 VEPATPEEGEPATQRQDPAAAQEGEDEGASAGQGPKPEADSQEQGHPQTGCECEDGPDGQ 95
Query: 83 EKTPPNPKHAKTKEAGDGQ 101
E PPNP+ KT E G+ Q
Sbjct: 96 EMDPPNPEEVKTPEEGEKQ 114
>gi|7705379 G antigen 8 [Homo sapiens]
Length = 116
Score = 51.2 bits (121), Expect = 2e-07
Identities = 31/79 (39%), Positives = 38/79 (48%), Gaps = 2/79 (2%)
Query: 25 VAPGESQQEEPPTDNQDIEPGQERE--GTPPIEERKVEGDCQEMDLEKTRSERGDGSDVK 82
V P ++ EP T QD QE E G + K E D QE +T E DG D +
Sbjct: 35 VEPATPEEGEPATQRQDPAAAQEGEDEGASAGQGPKPEADSQEQGHPQTGCECEDGPDGQ 94
Query: 83 EKTPPNPKHAKTKEAGDGQ 101
E PPNP+ KT E G+ Q
Sbjct: 95 EMDPPNPEEVKTPEEGEKQ 113
>gi|4503887 G antigen 6 [Homo sapiens]
Length = 117
Score = 50.8 bits (120), Expect = 2e-07
Identities = 31/79 (39%), Positives = 38/79 (48%), Gaps = 2/79 (2%)
Query: 25 VAPGESQQEEPPTDNQDIEPGQERE--GTPPIEERKVEGDCQEMDLEKTRSERGDGSDVK 82
V P ++ EP T QD QE E G + K E D QE +T E DG D +
Sbjct: 36 VEPATPEEGEPATQRQDPAAAQEGEDEGASAGQGPKPEADSQEQGHPQTGCECEDGPDGQ 95
Query: 83 EKTPPNPKHAKTKEAGDGQ 101
E PPNP+ KT E G+ Q
Sbjct: 96 EVDPPNPEEVKTPEEGEKQ 114
>gi|148491062 G antigen 12J [Homo sapiens]
Length = 117
Score = 50.1 bits (118), Expect = 4e-07
Identities = 31/79 (39%), Positives = 37/79 (46%), Gaps = 2/79 (2%)
Query: 25 VAPGESQQEEPPTDNQDIEPGQERE--GTPPIEERKVEGDCQEMDLEKTRSERGDGSDVK 82
V P ++ EP T QD QE E G + K E D QE +T E DG D +
Sbjct: 36 VEPATPEEGEPATQRQDPAAAQEGEDEGASAGQGPKPEADSQEQGHPQTGCECEDGPDGQ 95
Query: 83 EKTPPNPKHAKTKEAGDGQ 101
E PPNP+ KT E G Q
Sbjct: 96 EMDPPNPEEVKTPEEGKKQ 114
>gi|187608830 G antigen 2E [Homo sapiens]
Length = 116
Score = 50.1 bits (118), Expect = 4e-07
Identities = 31/79 (39%), Positives = 37/79 (46%), Gaps = 2/79 (2%)
Query: 25 VAPGESQQEEPPTDNQDIEPGQERE--GTPPIEERKVEGDCQEMDLEKTRSERGDGSDVK 82
V P ++ EP T QD QE E G + K E D QE +T E DG D +
Sbjct: 35 VEPATPEEGEPATQRQDPAAAQEGEDEGASAGQGPKPEADSQEQGHPQTGCECEDGPDGQ 94
Query: 83 EKTPPNPKHAKTKEAGDGQ 101
E PPNP+ KT E G Q
Sbjct: 95 EMDPPNPEEVKTPEEGKKQ 113
>gi|148528977 G antigen 13 [Homo sapiens]
Length = 117
Score = 48.9 bits (115), Expect = 9e-07
Identities = 31/79 (39%), Positives = 37/79 (46%), Gaps = 2/79 (2%)
Query: 25 VAPGESQQEEPPTDNQDIEPGQERE--GTPPIEERKVEGDCQEMDLEKTRSERGDGSDVK 82
V P ++ EP T QD QE E G + K E D QE +T E DG D +
Sbjct: 36 VEPATPEEGEPATQCQDPAAAQEGEDEGASAGQGPKPEADSQEQGHPQTGCECEDGPDGQ 95
Query: 83 EKTPPNPKHAKTKEAGDGQ 101
E PPNP+ KT E G Q
Sbjct: 96 EMDPPNPEEVKTPEEGKKQ 114
>gi|148491064 G antigen 12G [Homo sapiens]
Length = 117
Score = 48.5 bits (114), Expect = 1e-06
Identities = 30/79 (37%), Positives = 37/79 (46%), Gaps = 2/79 (2%)
Query: 25 VAPGESQQEEPPTDNQDIEPGQERE--GTPPIEERKVEGDCQEMDLEKTRSERGDGSDVK 82
V P ++ EP T QD QE E G + K E QE +T E DG D +
Sbjct: 36 VEPATPEEGEPATQRQDPAAAQEGEDEGASAGQGPKPEAHSQEQGHPQTGCECEDGPDGQ 95
Query: 83 EKTPPNPKHAKTKEAGDGQ 101
E PPNP+ KT E G+ Q
Sbjct: 96 EMDPPNPEEVKTPEEGEKQ 114
>gi|148529018 G antigen 2B [Homo sapiens]
Length = 116
Score = 48.5 bits (114), Expect = 1e-06
Identities = 30/79 (37%), Positives = 37/79 (46%), Gaps = 2/79 (2%)
Query: 25 VAPGESQQEEPPTDNQDIEPGQERE--GTPPIEERKVEGDCQEMDLEKTRSERGDGSDVK 82
V P ++ EP T QD QE E G + K E QE +T E DG D +
Sbjct: 35 VEPATPEEGEPATQRQDPAAAQEGEDEGASAGQGPKPEAHSQEQGHPQTGCECEDGPDGQ 94
Query: 83 EKTPPNPKHAKTKEAGDGQ 101
E PPNP+ KT E G+ Q
Sbjct: 95 EMDPPNPEEVKTPEEGEKQ 113
>gi|187761326 G antigen 2A [Homo sapiens]
Length = 116
Score = 48.5 bits (114), Expect = 1e-06
Identities = 30/79 (37%), Positives = 37/79 (46%), Gaps = 2/79 (2%)
Query: 25 VAPGESQQEEPPTDNQDIEPGQER--EGTPPIEERKVEGDCQEMDLEKTRSERGDGSDVK 82
V P ++ EP T QD QE EG + K E QE +T E DG D +
Sbjct: 35 VEPATPEEGEPATQRQDPAAAQEGQDEGASAGQGPKPEAHSQEQGHPQTGCECEDGPDGQ 94
Query: 83 EKTPPNPKHAKTKEAGDGQ 101
E PPNP+ KT E G+ Q
Sbjct: 95 EMDPPNPEEVKTPEEGEKQ 113
>gi|11024641 G antigen 7 [Homo sapiens]
Length = 117
Score = 48.5 bits (114), Expect = 1e-06
Identities = 30/79 (37%), Positives = 37/79 (46%), Gaps = 2/79 (2%)
Query: 25 VAPGESQQEEPPTDNQDIEPGQERE--GTPPIEERKVEGDCQEMDLEKTRSERGDGSDVK 82
V P ++ EP T QD QE E G + K E QE +T E DG D +
Sbjct: 36 VEPATPEEGEPATQRQDPAAAQEGEDEGASAGQGPKPEAHSQEQGHPQTGCECEDGPDGQ 95
Query: 83 EKTPPNPKHAKTKEAGDGQ 101
E PPNP+ KT E G+ Q
Sbjct: 96 EMDPPNPEEVKTPEEGEKQ 114
>gi|150010546 G antigen 10 [Homo sapiens]
Length = 116
Score = 48.5 bits (114), Expect = 1e-06
Identities = 31/79 (39%), Positives = 37/79 (46%), Gaps = 2/79 (2%)
Query: 25 VAPGESQQEEPPTDNQDIEPGQERE--GTPPIEERKVEGDCQEMDLEKTRSERGDGSDVK 82
V P ++ EP T QD QE E G + K E D QE KT E GDG D +
Sbjct: 35 VEPATPEEGEPATQRQDPAAAQEGEDEGASAGQGPKPEADSQEQVHPKTGCECGDGPDGQ 94
Query: 83 EKTPPNPKHAKTKEAGDGQ 101
E PNP+ K E G+ Q
Sbjct: 95 EMGLPNPEEVKRPEEGEKQ 113
>gi|148491078 G antigen 12F [Homo sapiens]
Length = 117
Score = 48.5 bits (114), Expect = 1e-06
Identities = 30/79 (37%), Positives = 37/79 (46%), Gaps = 2/79 (2%)
Query: 25 VAPGESQQEEPPTDNQDIEPGQERE--GTPPIEERKVEGDCQEMDLEKTRSERGDGSDVK 82
V P ++ EP T QD QE E G + K E QE +T E DG D +
Sbjct: 36 VEPATPEEGEPATQRQDPAAAQEGEDEGASAGQGPKPEAHSQEQGHPQTGCECEDGPDGQ 95
Query: 83 EKTPPNPKHAKTKEAGDGQ 101
E PPNP+ KT E G+ Q
Sbjct: 96 EMDPPNPEEVKTPEEGEKQ 114
>gi|4503889 G antigen 12I [Homo sapiens]
Length = 117
Score = 48.5 bits (114), Expect = 1e-06
Identities = 30/79 (37%), Positives = 37/79 (46%), Gaps = 2/79 (2%)
Query: 25 VAPGESQQEEPPTDNQDIEPGQERE--GTPPIEERKVEGDCQEMDLEKTRSERGDGSDVK 82
V P ++ EP T QD QE E G + K E QE +T E DG D +
Sbjct: 36 VEPATPEEGEPATQRQDPAAAQEGEDEGASAGQGPKPEAHSQEQGHPQTGCECEDGPDGQ 95
Query: 83 EKTPPNPKHAKTKEAGDGQ 101
E PPNP+ KT E G+ Q
Sbjct: 96 EMDPPNPEEVKTPEEGEKQ 114
>gi|4503879 G antigen 2 [Homo sapiens]
Length = 116
Score = 48.5 bits (114), Expect = 1e-06
Identities = 30/79 (37%), Positives = 37/79 (46%), Gaps = 2/79 (2%)
Query: 25 VAPGESQQEEPPTDNQDIEPGQERE--GTPPIEERKVEGDCQEMDLEKTRSERGDGSDVK 82
V P ++ EP T QD QE E G + K E QE +T E DG D +
Sbjct: 35 VEPATPEEGEPATQRQDPAAAQEGEDEGASAGQGPKPEAHSQEQGHPQTGCECEDGPDGQ 94
Query: 83 EKTPPNPKHAKTKEAGDGQ 101
E PPNP+ KT E G+ Q
Sbjct: 95 EMDPPNPEEVKTPEEGEKQ 113
>gi|148491101 G antigen 12C [Homo sapiens]
Length = 117
Score = 47.4 bits (111), Expect = 2e-06
Identities = 30/79 (37%), Positives = 37/79 (46%), Gaps = 2/79 (2%)
Query: 25 VAPGESQQEEPPTDNQDIEPGQERE--GTPPIEERKVEGDCQEMDLEKTRSERGDGSDVK 82
V P ++ EP T QD QE E G + K E QE +T E DG D +
Sbjct: 36 VEPATPEEGEPATQCQDPAAAQEGEDEGASAGQGPKPEAHSQEQGHPQTGCECEDGPDGQ 95
Query: 83 EKTPPNPKHAKTKEAGDGQ 101
E PPNP+ KT E G+ Q
Sbjct: 96 EMDPPNPEEVKTPEEGEKQ 114
>gi|148491084 G antigen 12H [Homo sapiens]
Length = 117
Score = 47.4 bits (111), Expect = 2e-06
Identities = 30/79 (37%), Positives = 37/79 (46%), Gaps = 2/79 (2%)
Query: 25 VAPGESQQEEPPTDNQDIEPGQ--EREGTPPIEERKVEGDCQEMDLEKTRSERGDGSDVK 82
V P ++ EP T QD Q E EG + K E QE +T E DG D +
Sbjct: 36 VEPATPEEGEPATQCQDPAAAQKGEDEGASAGQGPKPEAHSQEQGHPQTGCECEDGPDGQ 95
Query: 83 EKTPPNPKHAKTKEAGDGQ 101
E PPNP+ KT E G+ Q
Sbjct: 96 EMDPPNPEEVKTPEEGEKQ 114
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.303 0.127 0.361
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,575,516
Number of Sequences: 37866
Number of extensions: 302214
Number of successful extensions: 1365
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 135
Number of HSP's successfully gapped in prelim test: 114
Number of HSP's that attempted gapping in prelim test: 1067
Number of HSP's gapped (non-prelim): 342
length of query: 102
length of database: 18,247,518
effective HSP length: 73
effective length of query: 29
effective length of database: 15,483,300
effective search space: 449015700
effective search space used: 449015700
T: 11
A: 40
X1: 17 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (21.7 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.