Search of human proteins with 58761502

Search of human proteins with 58761502

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|58761502 Obg-like ATPase 1 isoform 2 [Homo sapiens]
         (238 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|58761502 Obg-like ATPase 1 isoform 2 [Homo sapiens]                485   e-137
gi|58761500 Obg-like ATPase 1 isoform 1 [Homo sapiens]                485   e-137
gi|5902152 uroplakin 3A precursor [Homo sapiens]                       30   1.8  
gi|198041928 FYVE, RhoGEF and PH domain containing 4 [Homo sapiens]    28   5.3  
gi|37574601 zinc finger protein 232 [Homo sapiens]                     28   7.0  
gi|144922720 coiled-coil domain containing 15 [Homo sapiens]           28   7.0  
gi|192807292 keratin 24 [Homo sapiens]                                 28   9.1  
gi|221316669 oxoglutarate dehydrogenase-like isoform c [Homo sap...    28   9.1  
gi|221316665 oxoglutarate dehydrogenase-like isoform b [Homo sap...    28   9.1  
gi|221316661 oxoglutarate dehydrogenase-like isoform a [Homo sap...    28   9.1  

>gi|58761502 Obg-like ATPase 1 isoform 2 [Homo sapiens]
          Length = 238

 Score =  485 bits (1249), Expect = e-137
 Identities = 238/238 (100%), Positives = 238/238 (100%)

Query: 1   MIGPIIDKLEKVAVRGGDKKLKPEYDIMCKVKSWVIDQKKPVRFYHDWNDKEIEVLNKHL 60
           MIGPIIDKLEKVAVRGGDKKLKPEYDIMCKVKSWVIDQKKPVRFYHDWNDKEIEVLNKHL
Sbjct: 1   MIGPIIDKLEKVAVRGGDKKLKPEYDIMCKVKSWVIDQKKPVRFYHDWNDKEIEVLNKHL 60

Query: 61  FLTSKPMVYLVNLSEKDYIRKKNKWLIKIKEWVDKYDPGALVIPFSGALELKLQELSAEE 120
           FLTSKPMVYLVNLSEKDYIRKKNKWLIKIKEWVDKYDPGALVIPFSGALELKLQELSAEE
Sbjct: 61  FLTSKPMVYLVNLSEKDYIRKKNKWLIKIKEWVDKYDPGALVIPFSGALELKLQELSAEE 120

Query: 121 RQKYLEANMTQSALPKIIKAGFAALQLEYFFTAGPDEVRAWTIRKGTKAPQAAGKIHTDF 180
           RQKYLEANMTQSALPKIIKAGFAALQLEYFFTAGPDEVRAWTIRKGTKAPQAAGKIHTDF
Sbjct: 121 RQKYLEANMTQSALPKIIKAGFAALQLEYFFTAGPDEVRAWTIRKGTKAPQAAGKIHTDF 180

Query: 181 EKGFIMAEVMKYEDFKEEGSENAVKAAGKYRQQGRNYIVEDGDIIFFKFNTPQQPKKK 238
           EKGFIMAEVMKYEDFKEEGSENAVKAAGKYRQQGRNYIVEDGDIIFFKFNTPQQPKKK
Sbjct: 181 EKGFIMAEVMKYEDFKEEGSENAVKAAGKYRQQGRNYIVEDGDIIFFKFNTPQQPKKK 238


>gi|58761500 Obg-like ATPase 1 isoform 1 [Homo sapiens]
          Length = 396

 Score =  485 bits (1249), Expect = e-137
 Identities = 238/238 (100%), Positives = 238/238 (100%)

Query: 1   MIGPIIDKLEKVAVRGGDKKLKPEYDIMCKVKSWVIDQKKPVRFYHDWNDKEIEVLNKHL 60
           MIGPIIDKLEKVAVRGGDKKLKPEYDIMCKVKSWVIDQKKPVRFYHDWNDKEIEVLNKHL
Sbjct: 159 MIGPIIDKLEKVAVRGGDKKLKPEYDIMCKVKSWVIDQKKPVRFYHDWNDKEIEVLNKHL 218

Query: 61  FLTSKPMVYLVNLSEKDYIRKKNKWLIKIKEWVDKYDPGALVIPFSGALELKLQELSAEE 120
           FLTSKPMVYLVNLSEKDYIRKKNKWLIKIKEWVDKYDPGALVIPFSGALELKLQELSAEE
Sbjct: 219 FLTSKPMVYLVNLSEKDYIRKKNKWLIKIKEWVDKYDPGALVIPFSGALELKLQELSAEE 278

Query: 121 RQKYLEANMTQSALPKIIKAGFAALQLEYFFTAGPDEVRAWTIRKGTKAPQAAGKIHTDF 180
           RQKYLEANMTQSALPKIIKAGFAALQLEYFFTAGPDEVRAWTIRKGTKAPQAAGKIHTDF
Sbjct: 279 RQKYLEANMTQSALPKIIKAGFAALQLEYFFTAGPDEVRAWTIRKGTKAPQAAGKIHTDF 338

Query: 181 EKGFIMAEVMKYEDFKEEGSENAVKAAGKYRQQGRNYIVEDGDIIFFKFNTPQQPKKK 238
           EKGFIMAEVMKYEDFKEEGSENAVKAAGKYRQQGRNYIVEDGDIIFFKFNTPQQPKKK
Sbjct: 339 EKGFIMAEVMKYEDFKEEGSENAVKAAGKYRQQGRNYIVEDGDIIFFKFNTPQQPKKK 396


>gi|5902152 uroplakin 3A precursor [Homo sapiens]
          Length = 287

 Score = 30.0 bits (66), Expect = 1.8
 Identities = 13/43 (30%), Positives = 27/43 (62%)

Query: 98  PGALVIPFSGALELKLQELSAEERQKYLEANMTQSALPKIIKA 140
           P  L++ F+GA+ L L ++ + + +   ++ +TQ A+PK + A
Sbjct: 219 PFFLLVGFAGAIALSLVDMGSSDGETTHDSQITQEAVPKSLGA 261


>gi|198041928 FYVE, RhoGEF and PH domain containing 4 [Homo sapiens]
          Length = 766

 Score = 28.5 bits (62), Expect = 5.3
 Identities = 27/101 (26%), Positives = 45/101 (44%), Gaps = 16/101 (15%)

Query: 47  DWND--KEIEVLNKHLFLTSKPMVYLVNLSEKDYIRKKNKWLIKIKEWV----DKYDPGA 100
           DWND  K +E+++     ++  +  + NL          K L++I E +    D  +P  
Sbjct: 372 DWNDAKKSLEIISTAASHSNSAIRKMENL----------KKLLEIYEMLGEEEDIVNPSN 421

Query: 101 LVIPFSGALELKLQELSAEERQKYLEANMTQSALPKIIKAG 141
            +I     L+L  +  SA+ER  +L  NM    +PK    G
Sbjct: 422 ELIKEGQILKLAARNTSAQERYLFLFNNMLLYCVPKFSLVG 462


>gi|37574601 zinc finger protein 232 [Homo sapiens]
          Length = 444

 Score = 28.1 bits (61), Expect = 7.0
 Identities = 14/39 (35%), Positives = 21/39 (53%)

Query: 145 LQLEYFFTAGPDEVRAWTIRKGTKAPQAAGKIHTDFEKG 183
           L LE F T  P+E+++W      K+ + A  +  D EKG
Sbjct: 122 LVLEQFLTILPEELQSWVRGHHPKSGEEAVTVLEDLEKG 160


>gi|144922720 coiled-coil domain containing 15 [Homo sapiens]
          Length = 951

 Score = 28.1 bits (61), Expect = 7.0
 Identities = 18/64 (28%), Positives = 33/64 (51%), Gaps = 3/64 (4%)

Query: 63  TSKPMVYLVNLSEKDYIR---KKNKWLIKIKEWVDKYDPGALVIPFSGALELKLQELSAE 119
           TS+  + L  L  KD +    ++N+ ++ +  WV+   PG+  IP   +  L  +EL  +
Sbjct: 13  TSRLPLALNPLKSKDVLAVLAERNEAIVPVGAWVEPASPGSSEIPAYTSAYLIEEELKEQ 72

Query: 120 ERQK 123
            R+K
Sbjct: 73  LRKK 76


>gi|192807292 keratin 24 [Homo sapiens]
          Length = 525

 Score = 27.7 bits (60), Expect = 9.1
 Identities = 10/13 (76%), Positives = 11/13 (84%)

Query: 88  KIKEWVDKYDPGA 100
           KIKEW DKY PG+
Sbjct: 171 KIKEWYDKYGPGS 183


>gi|221316669 oxoglutarate dehydrogenase-like isoform c [Homo
           sapiens]
          Length = 801

 Score = 27.7 bits (60), Expect = 9.1
 Identities = 19/76 (25%), Positives = 34/76 (44%), Gaps = 9/76 (11%)

Query: 73  LSEKDYIRKKNKWLIKIKEWVDKYDPG---------ALVIPFSGALELKLQELSAEERQK 123
           + E+ Y R K+K ++ IK W+D   PG         ++  P +G  E  L  + +     
Sbjct: 343 ICEEAYGRSKDKKILHIKHWLDSPWPGFFNVDGEPKSMTCPATGIPEDMLTHIGSVASSV 402

Query: 124 YLEANMTQSALPKIIK 139
            LE     + L +I++
Sbjct: 403 PLEDFKIHTGLSRILR 418


>gi|221316665 oxoglutarate dehydrogenase-like isoform b [Homo
           sapiens]
          Length = 953

 Score = 27.7 bits (60), Expect = 9.1
 Identities = 19/76 (25%), Positives = 34/76 (44%), Gaps = 9/76 (11%)

Query: 73  LSEKDYIRKKNKWLIKIKEWVDKYDPG---------ALVIPFSGALELKLQELSAEERQK 123
           + E+ Y R K+K ++ IK W+D   PG         ++  P +G  E  L  + +     
Sbjct: 495 ICEEAYGRSKDKKILHIKHWLDSPWPGFFNVDGEPKSMTCPATGIPEDMLTHIGSVASSV 554

Query: 124 YLEANMTQSALPKIIK 139
            LE     + L +I++
Sbjct: 555 PLEDFKIHTGLSRILR 570


>gi|221316661 oxoglutarate dehydrogenase-like isoform a [Homo
           sapiens]
          Length = 1010

 Score = 27.7 bits (60), Expect = 9.1
 Identities = 19/76 (25%), Positives = 34/76 (44%), Gaps = 9/76 (11%)

Query: 73  LSEKDYIRKKNKWLIKIKEWVDKYDPG---------ALVIPFSGALELKLQELSAEERQK 123
           + E+ Y R K+K ++ IK W+D   PG         ++  P +G  E  L  + +     
Sbjct: 552 ICEEAYGRSKDKKILHIKHWLDSPWPGFFNVDGEPKSMTCPATGIPEDMLTHIGSVASSV 611

Query: 124 YLEANMTQSALPKIIK 139
            LE     + L +I++
Sbjct: 612 PLEDFKIHTGLSRILR 627


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.318    0.136    0.404 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,281,945
Number of Sequences: 37866
Number of extensions: 384213
Number of successful extensions: 965
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 960
Number of HSP's gapped (non-prelim): 10
length of query: 238
length of database: 18,247,518
effective HSP length: 99
effective length of query: 139
effective length of database: 14,498,784
effective search space: 2015330976
effective search space used: 2015330976
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.